data_3C8U # _entry.id 3C8U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3C8U pdb_00003c8u 10.2210/pdb3c8u/pdb RCSB RCSB046486 ? ? WWPDB D_1000046486 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 377904 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3C8U _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-02-13 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative fructose transport system kinase (YP_612366.1) from Silicibacter sp. TM1040 at 1.95 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3C8U _cell.length_a 102.280 _cell.length_b 102.280 _cell.length_c 116.630 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C8U _symmetry.Int_Tables_number 155 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Fructokinase 22728.459 1 2.7.1.4 ? ? ? 2 water nat water 18.015 288 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)TLAALCQGVLERLDPRQPGRQLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVVP(MSE)DGFHLDNRLLEPRG LLPRKGAPETFDFEGFQRLCHALKHQERVIYPLFDRARDIAIAGAAEVGPECRVAIIEGNYLLFDAPGWRDLTAIWDVSI RLEVP(MSE)ADLEARLVQRWLDHGLNHDAAVARAQGNDLANARAIEAARLPADLTWPQA ; _entity_poly.pdbx_seq_one_letter_code_can ;GMTLAALCQGVLERLDPRQPGRQLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVVPMDGFHLDNRLLEPRGLLPRKGAP ETFDFEGFQRLCHALKHQERVIYPLFDRARDIAIAGAAEVGPECRVAIIEGNYLLFDAPGWRDLTAIWDVSIRLEVPMAD LEARLVQRWLDHGLNHDAAVARAQGNDLANARAIEAARLPADLTWPQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 377904 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 THR n 1 4 LEU n 1 5 ALA n 1 6 ALA n 1 7 LEU n 1 8 CYS n 1 9 GLN n 1 10 GLY n 1 11 VAL n 1 12 LEU n 1 13 GLU n 1 14 ARG n 1 15 LEU n 1 16 ASP n 1 17 PRO n 1 18 ARG n 1 19 GLN n 1 20 PRO n 1 21 GLY n 1 22 ARG n 1 23 GLN n 1 24 LEU n 1 25 VAL n 1 26 ALA n 1 27 LEU n 1 28 SER n 1 29 GLY n 1 30 ALA n 1 31 PRO n 1 32 GLY n 1 33 SER n 1 34 GLY n 1 35 LYS n 1 36 SER n 1 37 THR n 1 38 LEU n 1 39 SER n 1 40 ASN n 1 41 PRO n 1 42 LEU n 1 43 ALA n 1 44 ALA n 1 45 ALA n 1 46 LEU n 1 47 SER n 1 48 ALA n 1 49 GLN n 1 50 GLY n 1 51 LEU n 1 52 PRO n 1 53 ALA n 1 54 GLU n 1 55 VAL n 1 56 VAL n 1 57 PRO n 1 58 MSE n 1 59 ASP n 1 60 GLY n 1 61 PHE n 1 62 HIS n 1 63 LEU n 1 64 ASP n 1 65 ASN n 1 66 ARG n 1 67 LEU n 1 68 LEU n 1 69 GLU n 1 70 PRO n 1 71 ARG n 1 72 GLY n 1 73 LEU n 1 74 LEU n 1 75 PRO n 1 76 ARG n 1 77 LYS n 1 78 GLY n 1 79 ALA n 1 80 PRO n 1 81 GLU n 1 82 THR n 1 83 PHE n 1 84 ASP n 1 85 PHE n 1 86 GLU n 1 87 GLY n 1 88 PHE n 1 89 GLN n 1 90 ARG n 1 91 LEU n 1 92 CYS n 1 93 HIS n 1 94 ALA n 1 95 LEU n 1 96 LYS n 1 97 HIS n 1 98 GLN n 1 99 GLU n 1 100 ARG n 1 101 VAL n 1 102 ILE n 1 103 TYR n 1 104 PRO n 1 105 LEU n 1 106 PHE n 1 107 ASP n 1 108 ARG n 1 109 ALA n 1 110 ARG n 1 111 ASP n 1 112 ILE n 1 113 ALA n 1 114 ILE n 1 115 ALA n 1 116 GLY n 1 117 ALA n 1 118 ALA n 1 119 GLU n 1 120 VAL n 1 121 GLY n 1 122 PRO n 1 123 GLU n 1 124 CYS n 1 125 ARG n 1 126 VAL n 1 127 ALA n 1 128 ILE n 1 129 ILE n 1 130 GLU n 1 131 GLY n 1 132 ASN n 1 133 TYR n 1 134 LEU n 1 135 LEU n 1 136 PHE n 1 137 ASP n 1 138 ALA n 1 139 PRO n 1 140 GLY n 1 141 TRP n 1 142 ARG n 1 143 ASP n 1 144 LEU n 1 145 THR n 1 146 ALA n 1 147 ILE n 1 148 TRP n 1 149 ASP n 1 150 VAL n 1 151 SER n 1 152 ILE n 1 153 ARG n 1 154 LEU n 1 155 GLU n 1 156 VAL n 1 157 PRO n 1 158 MSE n 1 159 ALA n 1 160 ASP n 1 161 LEU n 1 162 GLU n 1 163 ALA n 1 164 ARG n 1 165 LEU n 1 166 VAL n 1 167 GLN n 1 168 ARG n 1 169 TRP n 1 170 LEU n 1 171 ASP n 1 172 HIS n 1 173 GLY n 1 174 LEU n 1 175 ASN n 1 176 HIS n 1 177 ASP n 1 178 ALA n 1 179 ALA n 1 180 VAL n 1 181 ALA n 1 182 ARG n 1 183 ALA n 1 184 GLN n 1 185 GLY n 1 186 ASN n 1 187 ASP n 1 188 LEU n 1 189 ALA n 1 190 ASN n 1 191 ALA n 1 192 ARG n 1 193 ALA n 1 194 ILE n 1 195 GLU n 1 196 ALA n 1 197 ALA n 1 198 ARG n 1 199 LEU n 1 200 PRO n 1 201 ALA n 1 202 ASP n 1 203 LEU n 1 204 THR n 1 205 TRP n 1 206 PRO n 1 207 GLN n 1 208 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Silicibacter _entity_src_gen.pdbx_gene_src_gene 'YP_612366.1, TM1040_0371' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain TM1040 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Silicibacter sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 292414 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1GJR2_SILST _struct_ref.pdbx_db_accession Q1GJR2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTLAALCQGVLERLDPRQPGRQLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVVPMDGFHLDNRLLEPRGLLPRKGAPE TFDFEGFQRLCHALKHQERVIYPLFDRARDIAIAGAAEVGPECRVAIIEGNYLLFDAPGWRDLTAIWDVSIRLEVPMADL EARLVQRWLDHGLNHDAAVARAQGNDLANARAIEAARLPADLTWPQA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3C8U _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 208 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1GJR2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 207 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3C8U _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q1GJR2 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3C8U # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 23.1% PEG 3350, 0.214M Sodium fluoride, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2008-01-13 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97978 1.0 2 0.91837 1.0 3 0.97964 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list '0.97978, 0.91837, 0.97964' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3C8U _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 35.267 _reflns.number_obs 15859 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_netI_over_sigmaI 19.950 _reflns.percent_possible_obs 91.600 _reflns.B_iso_Wilson_estimate 24.87 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.95 2.02 10958 ? 1715 0.263 7.2 ? ? ? ? ? 99.90 1 1 2.02 2.10 11201 ? 1682 0.184 10.3 ? ? ? ? ? 100.00 2 1 2.10 2.20 11510 ? 1774 0.139 12.5 ? ? ? ? ? 99.40 3 1 2.20 2.31 1258 ? 332 0.116 11.0 ? ? ? ? ? 20.50 4 1 2.31 2.46 12123 ? 1782 0.089 17.8 ? ? ? ? ? 100.00 5 1 2.46 2.65 11729 ? 1716 0.072 20.3 ? ? ? ? ? 100.00 6 1 2.65 2.91 11487 ? 1687 0.061 23.9 ? ? ? ? ? 100.00 7 1 2.91 3.33 11750 ? 1732 0.050 27.9 ? ? ? ? ? 100.00 8 1 3.33 4.19 10501 ? 1618 0.045 29.7 ? ? ? ? ? 92.20 9 1 4.19 35.267 11707 ? 1822 0.038 31.6 ? ? ? ? ? 99.30 10 1 # _refine.entry_id 3C8U _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 35.267 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 91.630 _refine.ls_number_reflns_obs 15859 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. THE REFLECTIONS WITHIN RESOLUTION RANGES 3.70-3.64 AND 2.3-2.2 ANGSTROM WERE EXCLUDED DURING INTEGRATION AND SUBSEQUENT STEPS DUE TO THE PRESENCE OF ICE RINGS. ; _refine.ls_R_factor_obs 0.167 _refine.ls_R_factor_R_work 0.165 _refine.ls_R_factor_R_free 0.218 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 792 _refine.B_iso_mean 19.647 _refine.aniso_B[1][1] -0.150 _refine.aniso_B[2][2] -0.150 _refine.aniso_B[3][3] 0.220 _refine.aniso_B[1][2] -0.070 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.pdbx_overall_ESU_R 0.172 _refine.pdbx_overall_ESU_R_Free 0.159 _refine.overall_SU_ML 0.098 _refine.overall_SU_B 6.184 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1571 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 288 _refine_hist.number_atoms_total 1859 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 35.267 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1676 0.014 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1163 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2297 1.410 1.978 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2827 1.582 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 225 5.398 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 80 32.374 23.125 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 272 15.361 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19 17.496 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 255 0.085 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1923 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 344 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1058 1.808 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 424 0.502 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1696 2.979 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 618 4.616 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 591 6.900 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.001 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.760 _refine_ls_shell.number_reflns_R_work 1182 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.187 _refine_ls_shell.R_factor_R_free 0.249 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1250 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3C8U _struct.title 'Crystal structure of putative fructose transport system kinase (YP_612366.1) from Silicibacter sp. TM1040 at 1.95 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_612366.1, putative fructose transport system kinase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Transferase ; _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.entry_id 3C8U # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? LEU A 15 ? THR A 2 LEU A 14 1 ? 13 HELX_P HELX_P2 2 LYS A 35 ? GLN A 49 ? LYS A 34 GLN A 48 1 ? 15 HELX_P HELX_P3 3 ASP A 59 ? HIS A 62 ? ASP A 58 HIS A 61 5 ? 4 HELX_P HELX_P4 4 ASP A 64 ? GLU A 69 ? ASP A 63 GLU A 68 1 ? 6 HELX_P HELX_P5 5 PRO A 70 ? GLY A 72 ? PRO A 69 GLY A 71 5 ? 3 HELX_P HELX_P6 6 LEU A 73 ? LYS A 77 ? LEU A 72 LYS A 76 5 ? 5 HELX_P HELX_P7 7 ALA A 79 ? PHE A 83 ? ALA A 78 PHE A 82 5 ? 5 HELX_P HELX_P8 8 ASP A 84 ? GLN A 98 ? ASP A 83 GLN A 97 1 ? 15 HELX_P HELX_P9 9 GLY A 140 ? ILE A 147 ? GLY A 139 ILE A 146 5 ? 8 HELX_P HELX_P10 10 PRO A 157 ? HIS A 172 ? PRO A 156 HIS A 171 1 ? 16 HELX_P HELX_P11 11 ASN A 175 ? GLY A 185 ? ASN A 174 GLY A 184 1 ? 11 HELX_P HELX_P12 12 GLY A 185 ? ALA A 196 ? GLY A 184 ALA A 195 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale3 covale both ? A PRO 57 C ? ? ? 1_555 A MSE 58 N ? ? A PRO 56 A MSE 57 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 58 C ? ? ? 1_555 A ASP 59 N ? ? A MSE 57 A ASP 58 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale5 covale both ? A PRO 157 C ? ? ? 1_555 A MSE 158 N ? ? A PRO 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale6 covale both ? A MSE 158 C ? ? ? 1_555 A ALA 159 N ? ? A MSE 157 A ALA 158 1_555 ? ? ? ? ? ? ? 1.333 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 205 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 204 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 206 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 205 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 53 ? PRO A 57 ? ALA A 52 PRO A 56 A 2 VAL A 126 ? GLY A 131 ? VAL A 125 GLY A 130 A 3 GLN A 23 ? SER A 28 ? GLN A 22 SER A 27 A 4 VAL A 150 ? LEU A 154 ? VAL A 149 LEU A 153 A 5 LEU A 203 ? TRP A 205 ? LEU A 202 TRP A 204 B 1 VAL A 101 ? ASP A 107 ? VAL A 100 ASP A 106 B 2 ILE A 112 ? VAL A 120 ? ILE A 111 VAL A 119 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 56 ? N VAL A 55 O ILE A 128 ? O ILE A 127 A 2 3 O ALA A 127 ? O ALA A 126 N VAL A 25 ? N VAL A 24 A 3 4 N SER A 28 ? N SER A 27 O LEU A 154 ? O LEU A 153 A 4 5 N ARG A 153 ? N ARG A 152 O TRP A 205 ? O TRP A 204 B 1 2 N ASP A 107 ? N ASP A 106 O ILE A 112 ? O ILE A 111 # _atom_sites.entry_id 3C8U _atom_sites.fract_transf_matrix[1][1] 0.009777 _atom_sites.fract_transf_matrix[1][2] 0.005645 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011290 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008574 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 ALA 6 5 5 ALA ALA A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 CYS 8 7 7 CYS CYS A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 VAL 11 10 10 VAL VAL A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 PRO 17 16 16 PRO PRO A . n A 1 18 ARG 18 17 17 ARG ARG A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 PRO 20 19 19 PRO PRO A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 VAL 25 24 24 VAL VAL A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 PRO 41 40 40 PRO PRO A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 GLN 49 48 48 GLN GLN A . n A 1 50 GLY 50 49 49 GLY GLY A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 GLU 54 53 53 GLU GLU A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 MSE 58 57 57 MSE MSE A . n A 1 59 ASP 59 58 58 ASP ASP A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 PHE 61 60 60 PHE PHE A . n A 1 62 HIS 62 61 61 HIS HIS A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 PRO 75 74 74 PRO PRO A . n A 1 76 ARG 76 75 75 ARG ARG A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 PRO 80 79 79 PRO PRO A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 PHE 85 84 84 PHE PHE A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 GLN 89 88 88 GLN GLN A . n A 1 90 ARG 90 89 89 ARG ARG A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 CYS 92 91 91 CYS CYS A . n A 1 93 HIS 93 92 92 HIS HIS A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 LYS 96 95 95 LYS LYS A . n A 1 97 HIS 97 96 96 HIS HIS A . n A 1 98 GLN 98 97 97 GLN GLN A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 ARG 100 99 99 ARG ARG A . n A 1 101 VAL 101 100 100 VAL VAL A . n A 1 102 ILE 102 101 101 ILE ILE A . n A 1 103 TYR 103 102 102 TYR TYR A . n A 1 104 PRO 104 103 103 PRO PRO A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 PHE 106 105 105 PHE PHE A . n A 1 107 ASP 107 106 106 ASP ASP A . n A 1 108 ARG 108 107 107 ARG ARG A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 ARG 110 109 109 ARG ARG A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 ILE 112 111 111 ILE ILE A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 VAL 120 119 119 VAL VAL A . n A 1 121 GLY 121 120 120 GLY GLY A . n A 1 122 PRO 122 121 121 PRO PRO A . n A 1 123 GLU 123 122 122 GLU GLU A . n A 1 124 CYS 124 123 123 CYS CYS A . n A 1 125 ARG 125 124 124 ARG ARG A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 ASN 132 131 131 ASN ASN A . n A 1 133 TYR 133 132 132 TYR TYR A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 PHE 136 135 135 PHE PHE A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 PRO 139 138 138 PRO PRO A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 TRP 141 140 140 TRP TRP A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 ASP 143 142 142 ASP ASP A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 THR 145 144 144 THR THR A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 TRP 148 147 147 TRP TRP A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 VAL 150 149 149 VAL VAL A . n A 1 151 SER 151 150 150 SER SER A . n A 1 152 ILE 152 151 151 ILE ILE A . n A 1 153 ARG 153 152 152 ARG ARG A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 VAL 156 155 155 VAL VAL A . n A 1 157 PRO 157 156 156 PRO PRO A . n A 1 158 MSE 158 157 157 MSE MSE A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 ASP 160 159 159 ASP ASP A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 ARG 164 163 163 ARG ARG A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 GLN 167 166 166 GLN GLN A . n A 1 168 ARG 168 167 167 ARG ARG A . n A 1 169 TRP 169 168 168 TRP TRP A . n A 1 170 LEU 170 169 169 LEU LEU A . n A 1 171 ASP 171 170 170 ASP ASP A . n A 1 172 HIS 172 171 171 HIS HIS A . n A 1 173 GLY 173 172 172 GLY GLY A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 ASN 175 174 174 ASN ASN A . n A 1 176 HIS 176 175 175 HIS HIS A . n A 1 177 ASP 177 176 176 ASP ASP A . n A 1 178 ALA 178 177 177 ALA ALA A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 VAL 180 179 179 VAL VAL A . n A 1 181 ALA 181 180 180 ALA ALA A . n A 1 182 ARG 182 181 181 ARG ARG A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 GLN 184 183 183 GLN GLN A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 ASN 186 185 185 ASN ASN A . n A 1 187 ASP 187 186 186 ASP ASP A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 ALA 189 188 188 ALA ALA A . n A 1 190 ASN 190 189 189 ASN ASN A . n A 1 191 ALA 191 190 190 ALA ALA A . n A 1 192 ARG 192 191 191 ARG ARG A . n A 1 193 ALA 193 192 192 ALA ALA A . n A 1 194 ILE 194 193 193 ILE ILE A . n A 1 195 GLU 195 194 194 GLU GLU A . n A 1 196 ALA 196 195 195 ALA ALA A . n A 1 197 ALA 197 196 196 ALA ALA A . n A 1 198 ARG 198 197 197 ARG ARG A . n A 1 199 LEU 199 198 198 LEU LEU A . n A 1 200 PRO 200 199 199 PRO PRO A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 ASP 202 201 201 ASP ASP A . n A 1 203 LEU 203 202 202 LEU LEU A . n A 1 204 THR 204 203 203 THR THR A . n A 1 205 TRP 205 204 204 TRP TRP A . n A 1 206 PRO 206 205 205 PRO PRO A . n A 1 207 GLN 207 206 206 GLN GLN A . n A 1 208 ALA 208 207 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 208 1 HOH HOH A . B 2 HOH 2 209 2 HOH HOH A . B 2 HOH 3 210 3 HOH HOH A . B 2 HOH 4 211 4 HOH HOH A . B 2 HOH 5 212 5 HOH HOH A . B 2 HOH 6 213 6 HOH HOH A . B 2 HOH 7 214 7 HOH HOH A . B 2 HOH 8 215 8 HOH HOH A . B 2 HOH 9 216 9 HOH HOH A . B 2 HOH 10 217 10 HOH HOH A . B 2 HOH 11 218 11 HOH HOH A . B 2 HOH 12 219 12 HOH HOH A . B 2 HOH 13 220 13 HOH HOH A . B 2 HOH 14 221 14 HOH HOH A . B 2 HOH 15 222 15 HOH HOH A . B 2 HOH 16 223 16 HOH HOH A . B 2 HOH 17 224 17 HOH HOH A . B 2 HOH 18 225 18 HOH HOH A . B 2 HOH 19 226 19 HOH HOH A . B 2 HOH 20 227 20 HOH HOH A . B 2 HOH 21 228 21 HOH HOH A . B 2 HOH 22 229 22 HOH HOH A . B 2 HOH 23 230 23 HOH HOH A . B 2 HOH 24 231 24 HOH HOH A . B 2 HOH 25 232 25 HOH HOH A . B 2 HOH 26 233 26 HOH HOH A . B 2 HOH 27 234 27 HOH HOH A . B 2 HOH 28 235 28 HOH HOH A . B 2 HOH 29 236 29 HOH HOH A . B 2 HOH 30 237 30 HOH HOH A . B 2 HOH 31 238 31 HOH HOH A . B 2 HOH 32 239 32 HOH HOH A . B 2 HOH 33 240 33 HOH HOH A . B 2 HOH 34 241 34 HOH HOH A . B 2 HOH 35 242 35 HOH HOH A . B 2 HOH 36 243 36 HOH HOH A . B 2 HOH 37 244 37 HOH HOH A . B 2 HOH 38 245 38 HOH HOH A . B 2 HOH 39 246 39 HOH HOH A . B 2 HOH 40 247 40 HOH HOH A . B 2 HOH 41 248 41 HOH HOH A . B 2 HOH 42 249 42 HOH HOH A . B 2 HOH 43 250 43 HOH HOH A . B 2 HOH 44 251 44 HOH HOH A . B 2 HOH 45 252 45 HOH HOH A . B 2 HOH 46 253 46 HOH HOH A . B 2 HOH 47 254 47 HOH HOH A . B 2 HOH 48 255 48 HOH HOH A . B 2 HOH 49 256 49 HOH HOH A . B 2 HOH 50 257 50 HOH HOH A . B 2 HOH 51 258 51 HOH HOH A . B 2 HOH 52 259 52 HOH HOH A . B 2 HOH 53 260 53 HOH HOH A . B 2 HOH 54 261 54 HOH HOH A . B 2 HOH 55 262 55 HOH HOH A . B 2 HOH 56 263 56 HOH HOH A . B 2 HOH 57 264 57 HOH HOH A . B 2 HOH 58 265 58 HOH HOH A . B 2 HOH 59 266 59 HOH HOH A . B 2 HOH 60 267 60 HOH HOH A . B 2 HOH 61 268 61 HOH HOH A . B 2 HOH 62 269 62 HOH HOH A . B 2 HOH 63 270 63 HOH HOH A . B 2 HOH 64 271 64 HOH HOH A . B 2 HOH 65 272 65 HOH HOH A . B 2 HOH 66 273 66 HOH HOH A . B 2 HOH 67 274 67 HOH HOH A . B 2 HOH 68 275 68 HOH HOH A . B 2 HOH 69 276 69 HOH HOH A . B 2 HOH 70 277 70 HOH HOH A . B 2 HOH 71 278 71 HOH HOH A . B 2 HOH 72 279 72 HOH HOH A . B 2 HOH 73 280 73 HOH HOH A . B 2 HOH 74 281 74 HOH HOH A . B 2 HOH 75 282 75 HOH HOH A . B 2 HOH 76 283 76 HOH HOH A . B 2 HOH 77 284 77 HOH HOH A . B 2 HOH 78 285 78 HOH HOH A . B 2 HOH 79 286 79 HOH HOH A . B 2 HOH 80 287 80 HOH HOH A . B 2 HOH 81 288 81 HOH HOH A . B 2 HOH 82 289 82 HOH HOH A . B 2 HOH 83 290 83 HOH HOH A . B 2 HOH 84 291 84 HOH HOH A . B 2 HOH 85 292 85 HOH HOH A . B 2 HOH 86 293 86 HOH HOH A . B 2 HOH 87 294 87 HOH HOH A . B 2 HOH 88 295 88 HOH HOH A . B 2 HOH 89 296 89 HOH HOH A . B 2 HOH 90 297 90 HOH HOH A . B 2 HOH 91 298 91 HOH HOH A . B 2 HOH 92 299 92 HOH HOH A . B 2 HOH 93 300 93 HOH HOH A . B 2 HOH 94 301 94 HOH HOH A . B 2 HOH 95 302 95 HOH HOH A . B 2 HOH 96 303 96 HOH HOH A . B 2 HOH 97 304 97 HOH HOH A . B 2 HOH 98 305 98 HOH HOH A . B 2 HOH 99 306 99 HOH HOH A . B 2 HOH 100 307 100 HOH HOH A . B 2 HOH 101 308 101 HOH HOH A . B 2 HOH 102 309 102 HOH HOH A . B 2 HOH 103 310 103 HOH HOH A . B 2 HOH 104 311 104 HOH HOH A . B 2 HOH 105 312 105 HOH HOH A . B 2 HOH 106 313 106 HOH HOH A . B 2 HOH 107 314 107 HOH HOH A . B 2 HOH 108 315 108 HOH HOH A . B 2 HOH 109 316 109 HOH HOH A . B 2 HOH 110 317 110 HOH HOH A . B 2 HOH 111 318 111 HOH HOH A . B 2 HOH 112 319 112 HOH HOH A . B 2 HOH 113 320 113 HOH HOH A . B 2 HOH 114 321 114 HOH HOH A . B 2 HOH 115 322 115 HOH HOH A . B 2 HOH 116 323 116 HOH HOH A . B 2 HOH 117 324 117 HOH HOH A . B 2 HOH 118 325 118 HOH HOH A . B 2 HOH 119 326 119 HOH HOH A . B 2 HOH 120 327 120 HOH HOH A . B 2 HOH 121 328 121 HOH HOH A . B 2 HOH 122 329 122 HOH HOH A . B 2 HOH 123 330 123 HOH HOH A . B 2 HOH 124 331 124 HOH HOH A . B 2 HOH 125 332 125 HOH HOH A . B 2 HOH 126 333 126 HOH HOH A . B 2 HOH 127 334 127 HOH HOH A . B 2 HOH 128 335 128 HOH HOH A . B 2 HOH 129 336 129 HOH HOH A . B 2 HOH 130 337 130 HOH HOH A . B 2 HOH 131 338 131 HOH HOH A . B 2 HOH 132 339 132 HOH HOH A . B 2 HOH 133 340 133 HOH HOH A . B 2 HOH 134 341 134 HOH HOH A . B 2 HOH 135 342 135 HOH HOH A . B 2 HOH 136 343 136 HOH HOH A . B 2 HOH 137 344 137 HOH HOH A . B 2 HOH 138 345 138 HOH HOH A . B 2 HOH 139 346 139 HOH HOH A . B 2 HOH 140 347 140 HOH HOH A . B 2 HOH 141 348 141 HOH HOH A . B 2 HOH 142 349 142 HOH HOH A . B 2 HOH 143 350 143 HOH HOH A . B 2 HOH 144 351 144 HOH HOH A . B 2 HOH 145 352 145 HOH HOH A . B 2 HOH 146 353 146 HOH HOH A . B 2 HOH 147 354 147 HOH HOH A . B 2 HOH 148 355 148 HOH HOH A . B 2 HOH 149 356 149 HOH HOH A . B 2 HOH 150 357 150 HOH HOH A . B 2 HOH 151 358 151 HOH HOH A . B 2 HOH 152 359 152 HOH HOH A . B 2 HOH 153 360 153 HOH HOH A . B 2 HOH 154 361 154 HOH HOH A . B 2 HOH 155 362 155 HOH HOH A . B 2 HOH 156 363 156 HOH HOH A . B 2 HOH 157 364 157 HOH HOH A . B 2 HOH 158 365 158 HOH HOH A . B 2 HOH 159 366 159 HOH HOH A . B 2 HOH 160 367 160 HOH HOH A . B 2 HOH 161 368 161 HOH HOH A . B 2 HOH 162 369 162 HOH HOH A . B 2 HOH 163 370 163 HOH HOH A . B 2 HOH 164 371 164 HOH HOH A . B 2 HOH 165 372 165 HOH HOH A . B 2 HOH 166 373 166 HOH HOH A . B 2 HOH 167 374 167 HOH HOH A . B 2 HOH 168 375 168 HOH HOH A . B 2 HOH 169 376 169 HOH HOH A . B 2 HOH 170 377 170 HOH HOH A . B 2 HOH 171 378 171 HOH HOH A . B 2 HOH 172 379 172 HOH HOH A . B 2 HOH 173 380 173 HOH HOH A . B 2 HOH 174 381 174 HOH HOH A . B 2 HOH 175 382 175 HOH HOH A . B 2 HOH 176 383 176 HOH HOH A . B 2 HOH 177 384 177 HOH HOH A . B 2 HOH 178 385 178 HOH HOH A . B 2 HOH 179 386 179 HOH HOH A . B 2 HOH 180 387 180 HOH HOH A . B 2 HOH 181 388 181 HOH HOH A . B 2 HOH 182 389 182 HOH HOH A . B 2 HOH 183 390 183 HOH HOH A . B 2 HOH 184 391 184 HOH HOH A . B 2 HOH 185 392 185 HOH HOH A . B 2 HOH 186 393 186 HOH HOH A . B 2 HOH 187 394 187 HOH HOH A . B 2 HOH 188 395 188 HOH HOH A . B 2 HOH 189 396 189 HOH HOH A . B 2 HOH 190 397 190 HOH HOH A . B 2 HOH 191 398 191 HOH HOH A . B 2 HOH 192 399 192 HOH HOH A . B 2 HOH 193 400 193 HOH HOH A . B 2 HOH 194 401 194 HOH HOH A . B 2 HOH 195 402 195 HOH HOH A . B 2 HOH 196 403 196 HOH HOH A . B 2 HOH 197 404 197 HOH HOH A . B 2 HOH 198 405 198 HOH HOH A . B 2 HOH 199 406 199 HOH HOH A . B 2 HOH 200 407 200 HOH HOH A . B 2 HOH 201 408 201 HOH HOH A . B 2 HOH 202 409 202 HOH HOH A . B 2 HOH 203 410 203 HOH HOH A . B 2 HOH 204 411 204 HOH HOH A . B 2 HOH 205 412 205 HOH HOH A . B 2 HOH 206 413 206 HOH HOH A . B 2 HOH 207 414 207 HOH HOH A . B 2 HOH 208 415 208 HOH HOH A . B 2 HOH 209 416 209 HOH HOH A . B 2 HOH 210 417 210 HOH HOH A . B 2 HOH 211 418 211 HOH HOH A . B 2 HOH 212 419 212 HOH HOH A . B 2 HOH 213 420 213 HOH HOH A . B 2 HOH 214 421 214 HOH HOH A . B 2 HOH 215 422 215 HOH HOH A . B 2 HOH 216 423 216 HOH HOH A . B 2 HOH 217 424 217 HOH HOH A . B 2 HOH 218 425 218 HOH HOH A . B 2 HOH 219 426 219 HOH HOH A . B 2 HOH 220 427 220 HOH HOH A . B 2 HOH 221 428 221 HOH HOH A . B 2 HOH 222 429 222 HOH HOH A . B 2 HOH 223 430 223 HOH HOH A . B 2 HOH 224 431 224 HOH HOH A . B 2 HOH 225 432 225 HOH HOH A . B 2 HOH 226 433 226 HOH HOH A . B 2 HOH 227 434 227 HOH HOH A . B 2 HOH 228 435 228 HOH HOH A . B 2 HOH 229 436 229 HOH HOH A . B 2 HOH 230 437 230 HOH HOH A . B 2 HOH 231 438 231 HOH HOH A . B 2 HOH 232 439 232 HOH HOH A . B 2 HOH 233 440 233 HOH HOH A . B 2 HOH 234 441 234 HOH HOH A . B 2 HOH 235 442 235 HOH HOH A . B 2 HOH 236 443 236 HOH HOH A . B 2 HOH 237 444 237 HOH HOH A . B 2 HOH 238 445 238 HOH HOH A . B 2 HOH 239 446 239 HOH HOH A . B 2 HOH 240 447 240 HOH HOH A . B 2 HOH 241 448 241 HOH HOH A . B 2 HOH 242 449 242 HOH HOH A . B 2 HOH 243 450 243 HOH HOH A . B 2 HOH 244 451 244 HOH HOH A . B 2 HOH 245 452 245 HOH HOH A . B 2 HOH 246 453 246 HOH HOH A . B 2 HOH 247 454 247 HOH HOH A . B 2 HOH 248 455 248 HOH HOH A . B 2 HOH 249 456 249 HOH HOH A . B 2 HOH 250 457 250 HOH HOH A . B 2 HOH 251 458 251 HOH HOH A . B 2 HOH 252 459 252 HOH HOH A . B 2 HOH 253 460 253 HOH HOH A . B 2 HOH 254 461 254 HOH HOH A . B 2 HOH 255 462 255 HOH HOH A . B 2 HOH 256 463 256 HOH HOH A . B 2 HOH 257 464 257 HOH HOH A . B 2 HOH 258 465 258 HOH HOH A . B 2 HOH 259 466 259 HOH HOH A . B 2 HOH 260 467 260 HOH HOH A . B 2 HOH 261 468 261 HOH HOH A . B 2 HOH 262 469 262 HOH HOH A . B 2 HOH 263 470 263 HOH HOH A . B 2 HOH 264 471 264 HOH HOH A . B 2 HOH 265 472 265 HOH HOH A . B 2 HOH 266 473 266 HOH HOH A . B 2 HOH 267 474 267 HOH HOH A . B 2 HOH 268 475 268 HOH HOH A . B 2 HOH 269 476 269 HOH HOH A . B 2 HOH 270 477 270 HOH HOH A . B 2 HOH 271 478 271 HOH HOH A . B 2 HOH 272 479 272 HOH HOH A . B 2 HOH 273 480 273 HOH HOH A . B 2 HOH 274 481 274 HOH HOH A . B 2 HOH 275 482 275 HOH HOH A . B 2 HOH 276 483 276 HOH HOH A . B 2 HOH 277 484 277 HOH HOH A . B 2 HOH 278 485 278 HOH HOH A . B 2 HOH 279 486 279 HOH HOH A . B 2 HOH 280 487 280 HOH HOH A . B 2 HOH 281 488 281 HOH HOH A . B 2 HOH 282 489 282 HOH HOH A . B 2 HOH 283 490 283 HOH HOH A . B 2 HOH 284 491 284 HOH HOH A . B 2 HOH 285 492 285 HOH HOH A . B 2 HOH 286 493 286 HOH HOH A . B 2 HOH 287 494 287 HOH HOH A . B 2 HOH 288 495 288 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 57 ? MET SELENOMETHIONINE 3 A MSE 158 A MSE 157 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 308 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 22.5935 _pdbx_refine_tls.origin_y 12.4151 _pdbx_refine_tls.origin_z 38.2847 _pdbx_refine_tls.T[1][1] -0.0172 _pdbx_refine_tls.T[2][2] -0.0276 _pdbx_refine_tls.T[3][3] -0.0186 _pdbx_refine_tls.T[1][2] 0.0401 _pdbx_refine_tls.T[1][3] 0.0308 _pdbx_refine_tls.T[2][3] 0.0171 _pdbx_refine_tls.L[1][1] 0.3968 _pdbx_refine_tls.L[2][2] 0.3713 _pdbx_refine_tls.L[3][3] 0.3999 _pdbx_refine_tls.L[1][2] 0.1923 _pdbx_refine_tls.L[1][3] 0.0372 _pdbx_refine_tls.L[2][3] -0.1390 _pdbx_refine_tls.S[1][1] -0.0073 _pdbx_refine_tls.S[2][2] 0.0305 _pdbx_refine_tls.S[3][3] -0.0232 _pdbx_refine_tls.S[1][2] 0.0128 _pdbx_refine_tls.S[1][3] 0.0895 _pdbx_refine_tls.S[2][3] 0.0572 _pdbx_refine_tls.S[2][1] -0.0321 _pdbx_refine_tls.S[3][1] -0.0202 _pdbx_refine_tls.S[3][2] -0.0292 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 207 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 206 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.4.0067 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_entry_details.entry_id 3C8U _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 338 ? ? O A HOH 476 ? ? 2.14 2 1 OD1 A ASP 176 ? ? O A HOH 361 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 185 ? ? -40.37 -75.33 2 1 ALA A 196 ? ? -142.08 54.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 107 ? CD ? A ARG 108 CD 2 1 Y 1 A ARG 107 ? NE ? A ARG 108 NE 3 1 Y 1 A ARG 107 ? CZ ? A ARG 108 CZ 4 1 Y 1 A ARG 107 ? NH1 ? A ARG 108 NH1 5 1 Y 1 A ARG 107 ? NH2 ? A ARG 108 NH2 6 1 Y 1 A GLN 206 ? CA ? A GLN 207 CA 7 1 Y 1 A GLN 206 ? C ? A GLN 207 C 8 1 Y 1 A GLN 206 ? O ? A GLN 207 O 9 1 Y 1 A GLN 206 ? CB ? A GLN 207 CB 10 1 Y 1 A GLN 206 ? CG ? A GLN 207 CG 11 1 Y 1 A GLN 206 ? CD ? A GLN 207 CD 12 1 Y 1 A GLN 206 ? OE1 ? A GLN 207 OE1 13 1 Y 1 A GLN 206 ? NE2 ? A GLN 207 NE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 207 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 208 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #