data_3C9P # _entry.id 3C9P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3C9P RCSB RCSB046517 WWPDB D_1000046517 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC80642 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3C9P _pdbx_database_status.recvd_initial_deposition_date 2008-02-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Zhou, M.' 2 'Abdullah, J.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of uncharacterized protein SP1917.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Zhou, M.' 2 primary 'Abdullah, J.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3C9P _cell.length_a 43.787 _cell.length_b 48.734 _cell.length_c 58.314 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C9P _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein SP1917' 14277.993 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 water nat water 18.015 115 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)SQKLYN(MSE)KFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPE RIAITGKICGVRIEEIDDPL(MSE)QEIRRLDKLVDWLAKGKTSQQVLEKYEKHK ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKI CGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC80642 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 SER n 1 6 GLN n 1 7 LYS n 1 8 LEU n 1 9 TYR n 1 10 ASN n 1 11 MSE n 1 12 LYS n 1 13 PHE n 1 14 ALA n 1 15 ALA n 1 16 VAL n 1 17 TYR n 1 18 LEU n 1 19 ALA n 1 20 LEU n 1 21 ILE n 1 22 ALA n 1 23 LYS n 1 24 VAL n 1 25 GLU n 1 26 ARG n 1 27 LYS n 1 28 GLY n 1 29 GLY n 1 30 LYS n 1 31 ALA n 1 32 GLU n 1 33 SER n 1 34 VAL n 1 35 HIS n 1 36 GLN n 1 37 VAL n 1 38 THR n 1 39 SER n 1 40 TRP n 1 41 LEU n 1 42 THR n 1 43 GLY n 1 44 TYR n 1 45 GLU n 1 46 VAL n 1 47 SER n 1 48 ASP n 1 49 VAL n 1 50 LEU n 1 51 ALA n 1 52 CYS n 1 53 LEU n 1 54 ASP n 1 55 ARG n 1 56 ASP n 1 57 VAL n 1 58 THR n 1 59 TYR n 1 60 GLY n 1 61 ASP n 1 62 PHE n 1 63 PHE n 1 64 ARG n 1 65 GLN n 1 66 ALA n 1 67 PRO n 1 68 TYR n 1 69 TYR n 1 70 VAL n 1 71 PRO n 1 72 GLU n 1 73 ARG n 1 74 ILE n 1 75 ALA n 1 76 ILE n 1 77 THR n 1 78 GLY n 1 79 LYS n 1 80 ILE n 1 81 CYS n 1 82 GLY n 1 83 VAL n 1 84 ARG n 1 85 ILE n 1 86 GLU n 1 87 GLU n 1 88 ILE n 1 89 ASP n 1 90 ASP n 1 91 PRO n 1 92 LEU n 1 93 MSE n 1 94 GLN n 1 95 GLU n 1 96 ILE n 1 97 ARG n 1 98 ARG n 1 99 LEU n 1 100 ASP n 1 101 LYS n 1 102 LEU n 1 103 VAL n 1 104 ASP n 1 105 TRP n 1 106 LEU n 1 107 ALA n 1 108 LYS n 1 109 GLY n 1 110 LYS n 1 111 THR n 1 112 SER n 1 113 GLN n 1 114 GLN n 1 115 VAL n 1 116 LEU n 1 117 GLU n 1 118 LYS n 1 119 TYR n 1 120 GLU n 1 121 LYS n 1 122 HIS n 1 123 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Streptococcus _entity_src_gen.pdbx_gene_src_gene SP_1917 _entity_src_gen.gene_src_species 'Streptococcus pneumoniae' _entity_src_gen.gene_src_strain TIGR4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 170187 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-334 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)star' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG9 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q97NU5_STRPN _struct_ref.pdbx_db_accession Q97NU5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGV RIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3C9P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q97NU5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 120 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 120 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3C9P SER A 1 ? UNP Q97NU5 ? ? 'EXPRESSION TAG' -2 1 1 3C9P ASN A 2 ? UNP Q97NU5 ? ? 'EXPRESSION TAG' -1 2 1 3C9P ALA A 3 ? UNP Q97NU5 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3C9P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.7M Sodium citrate tribasic dihydrate, 0.1M Bis-Tris propane, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-11-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97935 # _reflns.entry_id 3C9P _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.96 _reflns.d_resolution_low 50 _reflns.number_all 9499 _reflns.number_obs 9480 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.135 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.9 _reflns.B_iso_Wilson_estimate 16.65 _reflns.pdbx_redundancy 9.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.96 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.414 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.18 _reflns_shell.pdbx_redundancy 8.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 921 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3C9P _refine.ls_number_reflns_obs 9429 _refine.ls_number_reflns_all 9429 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.40 _refine.ls_d_res_high 1.96 _refine.ls_percent_reflns_obs 99.48 _refine.ls_R_factor_obs 0.16517 _refine.ls_R_factor_all 0.16517 _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.21026 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 451 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 17.329 _refine.aniso_B[1][1] 1.10 _refine.aniso_B[2][2] 0.16 _refine.aniso_B[3][3] -1.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.165 _refine.pdbx_overall_ESU_R_Free 0.149 _refine.overall_SU_ML 0.088 _refine.overall_SU_B 5.827 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 984 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1103 _refine_hist.d_res_high 1.96 _refine_hist.d_res_low 37.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 1050 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.354 1.973 ? 1422 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.150 5.000 ? 135 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.632 24.286 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.567 15.000 ? 206 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.064 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 156 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 784 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.197 0.200 ? 491 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 721 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.143 0.200 ? 92 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.185 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.148 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.881 1.500 ? 650 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.385 2.000 ? 1017 'X-RAY DIFFRACTION' ? r_scbond_it 2.672 3.000 ? 464 'X-RAY DIFFRACTION' ? r_scangle_it 4.144 4.500 ? 398 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.96 _refine_ls_shell.d_res_low 2.01 _refine_ls_shell.number_reflns_R_work 620 _refine_ls_shell.R_factor_R_work 0.161 _refine_ls_shell.percent_reflns_obs 95.32 _refine_ls_shell.R_factor_R_free 0.237 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 652 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3C9P _struct.title 'Crystal structure of uncharacterized protein SP1917' _struct.pdbx_descriptor 'Uncharacterized protein SP1917' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C9P _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Streptococcus pneumoniae, SP_1917, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? MSE A 11 ? SER A 2 MSE A 8 5 ? 7 HELX_P HELX_P2 2 LYS A 12 ? LYS A 27 ? LYS A 9 LYS A 24 1 ? 16 HELX_P HELX_P3 3 LYS A 30 ? GLY A 43 ? LYS A 27 GLY A 40 1 ? 14 HELX_P HELX_P4 4 GLU A 45 ? LEU A 53 ? GLU A 42 LEU A 50 1 ? 9 HELX_P HELX_P5 5 THR A 58 ? GLN A 65 ? THR A 55 GLN A 62 1 ? 8 HELX_P HELX_P6 6 VAL A 70 ? ILE A 76 ? VAL A 67 ILE A 73 5 ? 7 HELX_P HELX_P7 7 GLU A 86 ? ILE A 88 ? GLU A 83 ILE A 85 5 ? 3 HELX_P HELX_P8 8 ASP A 90 ? LYS A 108 ? ASP A 87 LYS A 105 1 ? 19 HELX_P HELX_P9 9 THR A 111 ? GLU A 120 ? THR A 108 GLU A 117 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A SER 5 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A ASN 10 C ? ? ? 1_555 A MSE 11 N ? ? A ASN 7 A MSE 8 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale ? ? A MSE 11 C ? ? ? 1_555 A LYS 12 N ? ? A MSE 8 A LYS 9 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A LEU 92 C ? ? ? 1_555 A MSE 93 N ? ? A LEU 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.335 ? covale6 covale ? ? A MSE 93 C ? ? ? 1_555 A GLN 94 N ? ? A MSE 90 A GLN 91 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 79 ? ILE A 80 ? LYS A 76 ILE A 77 A 2 VAL A 83 ? ARG A 84 ? VAL A 80 ARG A 81 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 80 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 77 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 83 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 80 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 20 ? LEU A 17 . ? 1_555 ? 2 AC1 5 TYR A 59 ? TYR A 56 . ? 1_555 ? 3 AC1 5 ARG A 97 ? ARG A 94 . ? 1_555 ? 4 AC1 5 ASP A 100 ? ASP A 97 . ? 1_555 ? 5 AC1 5 HOH C . ? HOH A 248 . ? 1_555 ? # _database_PDB_matrix.entry_id 3C9P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3C9P _atom_sites.fract_transf_matrix[1][1] 0.022838 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020520 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017149 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ALA A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 SER 5 2 2 SER SER A . n A 1 6 GLN 6 3 3 GLN GLN A . n A 1 7 LYS 7 4 4 LYS LYS A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 TYR 9 6 6 TYR TYR A . n A 1 10 ASN 10 7 7 ASN ASN A . n A 1 11 MSE 11 8 8 MSE MSE A . n A 1 12 LYS 12 9 9 LYS LYS A . n A 1 13 PHE 13 10 10 PHE PHE A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 ALA 15 12 12 ALA ALA A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 TYR 17 14 14 TYR TYR A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 ILE 21 18 18 ILE ILE A . n A 1 22 ALA 22 19 19 ALA ALA A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 VAL 24 21 21 VAL VAL A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 ARG 26 23 23 ARG ARG A . n A 1 27 LYS 27 24 24 LYS LYS A . n A 1 28 GLY 28 25 25 GLY GLY A . n A 1 29 GLY 29 26 26 GLY GLY A . n A 1 30 LYS 30 27 27 LYS LYS A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 GLU 32 29 29 GLU GLU A . n A 1 33 SER 33 30 30 SER SER A . n A 1 34 VAL 34 31 31 VAL VAL A . n A 1 35 HIS 35 32 32 HIS HIS A . n A 1 36 GLN 36 33 33 GLN GLN A . n A 1 37 VAL 37 34 34 VAL VAL A . n A 1 38 THR 38 35 35 THR THR A . n A 1 39 SER 39 36 36 SER SER A . n A 1 40 TRP 40 37 37 TRP TRP A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 THR 42 39 39 THR THR A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 TYR 44 41 41 TYR TYR A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 VAL 46 43 43 VAL VAL A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 ASP 48 45 45 ASP ASP A . n A 1 49 VAL 49 46 46 VAL VAL A . n A 1 50 LEU 50 47 47 LEU LEU A . n A 1 51 ALA 51 48 48 ALA ALA A . n A 1 52 CYS 52 49 49 CYS CYS A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 ASP 54 51 51 ASP ASP A . n A 1 55 ARG 55 52 52 ARG ARG A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 THR 58 55 55 THR THR A . n A 1 59 TYR 59 56 56 TYR TYR A . n A 1 60 GLY 60 57 57 GLY GLY A . n A 1 61 ASP 61 58 58 ASP ASP A . n A 1 62 PHE 62 59 59 PHE PHE A . n A 1 63 PHE 63 60 60 PHE PHE A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 ALA 66 63 63 ALA ALA A . n A 1 67 PRO 67 64 64 PRO PRO A . n A 1 68 TYR 68 65 65 TYR TYR A . n A 1 69 TYR 69 66 66 TYR TYR A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 PRO 71 68 68 PRO PRO A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 ARG 73 70 70 ARG ARG A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ILE 76 73 73 ILE ILE A . n A 1 77 THR 77 74 74 THR THR A . n A 1 78 GLY 78 75 75 GLY GLY A . n A 1 79 LYS 79 76 76 LYS LYS A . n A 1 80 ILE 80 77 77 ILE ILE A . n A 1 81 CYS 81 78 78 CYS CYS A . n A 1 82 GLY 82 79 79 GLY GLY A . n A 1 83 VAL 83 80 80 VAL VAL A . n A 1 84 ARG 84 81 81 ARG ARG A . n A 1 85 ILE 85 82 82 ILE ILE A . n A 1 86 GLU 86 83 83 GLU GLU A . n A 1 87 GLU 87 84 84 GLU GLU A . n A 1 88 ILE 88 85 85 ILE ILE A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 ASP 90 87 87 ASP ASP A . n A 1 91 PRO 91 88 88 PRO PRO A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 MSE 93 90 90 MSE MSE A . n A 1 94 GLN 94 91 91 GLN GLN A . n A 1 95 GLU 95 92 92 GLU GLU A . n A 1 96 ILE 96 93 93 ILE ILE A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 ARG 98 95 95 ARG ARG A . n A 1 99 LEU 99 96 96 LEU LEU A . n A 1 100 ASP 100 97 97 ASP ASP A . n A 1 101 LYS 101 98 98 LYS LYS A . n A 1 102 LEU 102 99 99 LEU LEU A . n A 1 103 VAL 103 100 100 VAL VAL A . n A 1 104 ASP 104 101 101 ASP ASP A . n A 1 105 TRP 105 102 102 TRP TRP A . n A 1 106 LEU 106 103 103 LEU LEU A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 LYS 108 105 105 LYS LYS A . n A 1 109 GLY 109 106 106 GLY GLY A . n A 1 110 LYS 110 107 107 LYS LYS A . n A 1 111 THR 111 108 108 THR THR A . n A 1 112 SER 112 109 109 SER SER A . n A 1 113 GLN 113 110 110 GLN GLN A . n A 1 114 GLN 114 111 111 GLN GLN A . n A 1 115 VAL 115 112 112 VAL VAL A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 GLU 117 114 114 GLU GLU A . n A 1 118 LYS 118 115 115 LYS LYS A . n A 1 119 TYR 119 116 116 TYR TYR A . n A 1 120 GLU 120 117 117 GLU GLU A . n A 1 121 LYS 121 118 118 LYS LYS A . n A 1 122 HIS 122 119 119 HIS HIS A . n A 1 123 LYS 123 120 120 LYS LYS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 201 201 EDO EDO A . C 3 HOH 1 202 1 HOH HOH A . C 3 HOH 2 203 2 HOH HOH A . C 3 HOH 3 204 3 HOH HOH A . C 3 HOH 4 205 4 HOH HOH A . C 3 HOH 5 206 5 HOH HOH A . C 3 HOH 6 207 6 HOH HOH A . C 3 HOH 7 208 7 HOH HOH A . C 3 HOH 8 209 8 HOH HOH A . C 3 HOH 9 210 9 HOH HOH A . C 3 HOH 10 211 10 HOH HOH A . C 3 HOH 11 212 11 HOH HOH A . C 3 HOH 12 213 12 HOH HOH A . C 3 HOH 13 214 13 HOH HOH A . C 3 HOH 14 215 14 HOH HOH A . C 3 HOH 15 216 15 HOH HOH A . C 3 HOH 16 217 16 HOH HOH A . C 3 HOH 17 218 17 HOH HOH A . C 3 HOH 18 219 18 HOH HOH A . C 3 HOH 19 220 19 HOH HOH A . C 3 HOH 20 221 20 HOH HOH A . C 3 HOH 21 222 21 HOH HOH A . C 3 HOH 22 223 22 HOH HOH A . C 3 HOH 23 224 23 HOH HOH A . C 3 HOH 24 225 24 HOH HOH A . C 3 HOH 25 226 25 HOH HOH A . C 3 HOH 26 227 26 HOH HOH A . C 3 HOH 27 228 27 HOH HOH A . C 3 HOH 28 229 28 HOH HOH A . C 3 HOH 29 230 29 HOH HOH A . C 3 HOH 30 231 30 HOH HOH A . C 3 HOH 31 232 31 HOH HOH A . C 3 HOH 32 233 32 HOH HOH A . C 3 HOH 33 234 33 HOH HOH A . C 3 HOH 34 235 34 HOH HOH A . C 3 HOH 35 236 35 HOH HOH A . C 3 HOH 36 237 36 HOH HOH A . C 3 HOH 37 238 37 HOH HOH A . C 3 HOH 38 239 38 HOH HOH A . C 3 HOH 39 240 39 HOH HOH A . C 3 HOH 40 241 40 HOH HOH A . C 3 HOH 41 242 41 HOH HOH A . C 3 HOH 42 243 42 HOH HOH A . C 3 HOH 43 244 43 HOH HOH A . C 3 HOH 44 245 44 HOH HOH A . C 3 HOH 45 246 45 HOH HOH A . C 3 HOH 46 247 46 HOH HOH A . C 3 HOH 47 248 47 HOH HOH A . C 3 HOH 48 249 48 HOH HOH A . C 3 HOH 49 250 49 HOH HOH A . C 3 HOH 50 251 50 HOH HOH A . C 3 HOH 51 252 51 HOH HOH A . C 3 HOH 52 253 52 HOH HOH A . C 3 HOH 53 254 53 HOH HOH A . C 3 HOH 54 255 54 HOH HOH A . C 3 HOH 55 256 55 HOH HOH A . C 3 HOH 56 257 56 HOH HOH A . C 3 HOH 57 258 57 HOH HOH A . C 3 HOH 58 259 58 HOH HOH A . C 3 HOH 59 260 59 HOH HOH A . C 3 HOH 60 261 60 HOH HOH A . C 3 HOH 61 262 61 HOH HOH A . C 3 HOH 62 263 62 HOH HOH A . C 3 HOH 63 264 63 HOH HOH A . C 3 HOH 64 265 64 HOH HOH A . C 3 HOH 65 266 65 HOH HOH A . C 3 HOH 66 267 66 HOH HOH A . C 3 HOH 67 268 67 HOH HOH A . C 3 HOH 68 269 68 HOH HOH A . C 3 HOH 69 270 69 HOH HOH A . C 3 HOH 70 271 70 HOH HOH A . C 3 HOH 71 272 71 HOH HOH A . C 3 HOH 72 273 72 HOH HOH A . C 3 HOH 73 274 73 HOH HOH A . C 3 HOH 74 275 74 HOH HOH A . C 3 HOH 75 276 75 HOH HOH A . C 3 HOH 76 277 76 HOH HOH A . C 3 HOH 77 278 77 HOH HOH A . C 3 HOH 78 279 78 HOH HOH A . C 3 HOH 79 280 79 HOH HOH A . C 3 HOH 80 281 80 HOH HOH A . C 3 HOH 81 282 81 HOH HOH A . C 3 HOH 82 283 82 HOH HOH A . C 3 HOH 83 284 83 HOH HOH A . C 3 HOH 84 285 84 HOH HOH A . C 3 HOH 85 286 85 HOH HOH A . C 3 HOH 86 287 86 HOH HOH A . C 3 HOH 87 288 87 HOH HOH A . C 3 HOH 88 289 88 HOH HOH A . C 3 HOH 89 290 89 HOH HOH A . C 3 HOH 90 291 90 HOH HOH A . C 3 HOH 91 292 91 HOH HOH A . C 3 HOH 92 293 92 HOH HOH A . C 3 HOH 93 294 93 HOH HOH A . C 3 HOH 94 295 94 HOH HOH A . C 3 HOH 95 296 95 HOH HOH A . C 3 HOH 96 297 96 HOH HOH A . C 3 HOH 97 298 97 HOH HOH A . C 3 HOH 98 299 98 HOH HOH A . C 3 HOH 99 300 99 HOH HOH A . C 3 HOH 100 301 100 HOH HOH A . C 3 HOH 101 302 101 HOH HOH A . C 3 HOH 102 303 102 HOH HOH A . C 3 HOH 103 304 103 HOH HOH A . C 3 HOH 104 305 104 HOH HOH A . C 3 HOH 105 306 105 HOH HOH A . C 3 HOH 106 307 106 HOH HOH A . C 3 HOH 107 308 107 HOH HOH A . C 3 HOH 108 309 108 HOH HOH A . C 3 HOH 109 310 109 HOH HOH A . C 3 HOH 110 311 110 HOH HOH A . C 3 HOH 111 312 111 HOH HOH A . C 3 HOH 112 313 112 HOH HOH A . C 3 HOH 113 314 113 HOH HOH A . C 3 HOH 114 315 114 HOH HOH A . C 3 HOH 115 316 115 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 11 A MSE 8 ? MET SELENOMETHIONINE 3 A MSE 93 A MSE 90 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-26 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 30.8945 _pdbx_refine_tls.origin_y 1.8145 _pdbx_refine_tls.origin_z 4.5710 _pdbx_refine_tls.T[1][1] -0.0387 _pdbx_refine_tls.T[2][2] -0.0216 _pdbx_refine_tls.T[3][3] -0.0237 _pdbx_refine_tls.T[1][2] -0.0010 _pdbx_refine_tls.T[1][3] 0.0086 _pdbx_refine_tls.T[2][3] -0.0002 _pdbx_refine_tls.L[1][1] 0.4059 _pdbx_refine_tls.L[2][2] 0.8705 _pdbx_refine_tls.L[3][3] 1.7303 _pdbx_refine_tls.L[1][2] -0.0321 _pdbx_refine_tls.L[1][3] -0.0732 _pdbx_refine_tls.L[2][3] 0.4381 _pdbx_refine_tls.S[1][1] 0.0202 _pdbx_refine_tls.S[1][2] 0.0276 _pdbx_refine_tls.S[1][3] -0.0172 _pdbx_refine_tls.S[2][1] -0.0377 _pdbx_refine_tls.S[2][2] -0.0201 _pdbx_refine_tls.S[2][3] 0.0600 _pdbx_refine_tls.S[3][1] 0.0251 _pdbx_refine_tls.S[3][2] -0.0369 _pdbx_refine_tls.S[3][3] -0.0002 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 120 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 123 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 HKL-3000 phasing . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 65 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -163.40 _pdbx_validate_torsion.psi 93.31 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN -1 ? CG ? A ASN 2 CG 2 1 Y 1 A ASN -1 ? OD1 ? A ASN 2 OD1 3 1 Y 1 A ASN -1 ? ND2 ? A ASN 2 ND2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id -2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #