data_3CH8 # _entry.id 3CH8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CH8 pdb_00003ch8 10.2210/pdb3ch8/pdb RCSB RCSB046773 ? ? WWPDB D_1000046773 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' entity 5 3 'Structure model' entity_name_com 6 3 'Structure model' entity_src_gen 7 3 'Structure model' pdbx_entity_src_syn 8 3 'Structure model' struct_ref 9 3 'Structure model' struct_ref_seq 10 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_entity.details' 4 3 'Structure model' '_entity.pdbx_description' # _pdbx_database_status.entry_id 3CH8 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-03-08 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Makabe, K.' 1 'Huang, J.' 2 'Koide, A.' 3 'Koide, S.' 4 # _citation.id primary _citation.title ;Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 392 _citation.page_first 1221 _citation.page_last 1231 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19646997 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.07.067 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, J.' 1 ? primary 'Makabe, K.' 2 ? primary 'Biancalana, M.' 3 ? primary 'Koide, A.' 4 ? primary 'Koide, S.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'fusion protein PDZ-Fibronectin,Fibronectin' 20996.334 1 ? ? ? 'see REMARK 400,see REMARK 400' 2 polymer syn 'C-terminal octapeptide from protein ARVCF' 927.011 1 ? ? 'C-terminal residues' ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'FN,Cold-insoluble globulin,CIG' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV REVGNGAKQEIRVRVEKDGGSGGVSSVPTNLEVVAATPTSLLISWDAYRELPVSYYRITYGETGGNSPVQEFTVPGSKST ATISGLKPGVDYTITVYAHYNYHYYSSPISINYRT ; ;GSPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV REVGNGAKQEIRVRVEKDGGSGGVSSVPTNLEVVAATPTSLLISWDAYRELPVSYYRITYGETGGNSPVQEFTVPGSKST ATISGLKPGVDYTITVYAHYNYHYYSSPISINYRT ; A ? 2 'polypeptide(L)' no no PQPVDSWV PQPVDSWV P ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 GLU n 1 5 LEU n 1 6 GLY n 1 7 PHE n 1 8 SER n 1 9 ILE n 1 10 SER n 1 11 GLY n 1 12 GLY n 1 13 VAL n 1 14 GLY n 1 15 GLY n 1 16 ARG n 1 17 GLY n 1 18 ASN n 1 19 PRO n 1 20 PHE n 1 21 ARG n 1 22 PRO n 1 23 ASP n 1 24 ASP n 1 25 ASP n 1 26 GLY n 1 27 ILE n 1 28 PHE n 1 29 VAL n 1 30 THR n 1 31 ARG n 1 32 VAL n 1 33 GLN n 1 34 PRO n 1 35 GLU n 1 36 GLY n 1 37 PRO n 1 38 ALA n 1 39 SER n 1 40 LYS n 1 41 LEU n 1 42 LEU n 1 43 GLN n 1 44 PRO n 1 45 GLY n 1 46 ASP n 1 47 LYS n 1 48 ILE n 1 49 ILE n 1 50 GLN n 1 51 ALA n 1 52 ASN n 1 53 GLY n 1 54 TYR n 1 55 SER n 1 56 PHE n 1 57 ILE n 1 58 ASN n 1 59 ILE n 1 60 GLU n 1 61 HIS n 1 62 GLY n 1 63 GLN n 1 64 ALA n 1 65 VAL n 1 66 SER n 1 67 LEU n 1 68 LEU n 1 69 LYS n 1 70 THR n 1 71 PHE n 1 72 GLN n 1 73 ASN n 1 74 THR n 1 75 VAL n 1 76 GLU n 1 77 LEU n 1 78 ILE n 1 79 ILE n 1 80 VAL n 1 81 ARG n 1 82 GLU n 1 83 VAL n 1 84 GLY n 1 85 ASN n 1 86 GLY n 1 87 ALA n 1 88 LYS n 1 89 GLN n 1 90 GLU n 1 91 ILE n 1 92 ARG n 1 93 VAL n 1 94 ARG n 1 95 VAL n 1 96 GLU n 1 97 LYS n 1 98 ASP n 1 99 GLY n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLY n 1 104 VAL n 1 105 SER n 1 106 SER n 1 107 VAL n 1 108 PRO n 1 109 THR n 1 110 ASN n 1 111 LEU n 1 112 GLU n 1 113 VAL n 1 114 VAL n 1 115 ALA n 1 116 ALA n 1 117 THR n 1 118 PRO n 1 119 THR n 1 120 SER n 1 121 LEU n 1 122 LEU n 1 123 ILE n 1 124 SER n 1 125 TRP n 1 126 ASP n 1 127 ALA n 1 128 TYR n 1 129 ARG n 1 130 GLU n 1 131 LEU n 1 132 PRO n 1 133 VAL n 1 134 SER n 1 135 TYR n 1 136 TYR n 1 137 ARG n 1 138 ILE n 1 139 THR n 1 140 TYR n 1 141 GLY n 1 142 GLU n 1 143 THR n 1 144 GLY n 1 145 GLY n 1 146 ASN n 1 147 SER n 1 148 PRO n 1 149 VAL n 1 150 GLN n 1 151 GLU n 1 152 PHE n 1 153 THR n 1 154 VAL n 1 155 PRO n 1 156 GLY n 1 157 SER n 1 158 LYS n 1 159 SER n 1 160 THR n 1 161 ALA n 1 162 THR n 1 163 ILE n 1 164 SER n 1 165 GLY n 1 166 LEU n 1 167 LYS n 1 168 PRO n 1 169 GLY n 1 170 VAL n 1 171 ASP n 1 172 TYR n 1 173 THR n 1 174 ILE n 1 175 THR n 1 176 VAL n 1 177 TYR n 1 178 ALA n 1 179 HIS n 1 180 TYR n 1 181 ASN n 1 182 TYR n 1 183 HIS n 1 184 TYR n 1 185 TYR n 1 186 SER n 1 187 SER n 1 188 PRO n 1 189 ILE n 1 190 SER n 1 191 ILE n 1 192 ASN n 1 193 TYR n 1 194 ARG n 1 195 THR n 2 1 PRO n 2 2 GLN n 2 3 PRO n 2 4 VAL n 2 5 ASP n 2 6 SER n 2 7 TRP n 2 8 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 83 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pET system' ? ? 1 2 sample 'Biological sequence' 84 195 human ? 'FN1, FN' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pET system' ? ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 GLY 6 5 5 GLY GLY A . n A 1 7 PHE 7 6 6 PHE PHE A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 PRO 19 18 18 PRO PRO A . n A 1 20 PHE 20 19 19 PHE PHE A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 PRO 22 21 21 PRO PRO A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 ARG 31 30 30 ARG ARG A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 GLN 33 32 32 GLN GLN A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 GLN 43 42 42 GLN GLN A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 ASN 52 51 51 ASN ASN A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 TYR 54 53 53 TYR TYR A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 GLN 63 62 62 GLN GLN A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 GLN 72 71 71 GLN GLN A . n A 1 73 ASN 73 72 72 ASN ASN A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 VAL 83 82 ? ? ? A . n A 1 84 GLY 84 83 ? ? ? A . n A 1 85 ASN 85 84 ? ? ? A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 LYS 88 87 87 LYS LYS A . n A 1 89 GLN 89 88 88 GLN GLN A . n A 1 90 GLU 90 89 89 GLU GLU A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 ARG 92 91 91 ARG ARG A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 GLU 96 95 95 GLU GLU A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 SER 101 100 100 SER SER A . n A 1 102 GLY 102 101 101 GLY GLY A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 SER 105 104 104 SER SER A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 ASN 110 109 109 ASN ASN A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 THR 117 116 116 THR THR A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 SER 120 119 119 SER SER A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 TRP 125 124 124 TRP TRP A . n A 1 126 ASP 126 125 125 ASP ASP A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 TYR 128 127 127 TYR TYR A . n A 1 129 ARG 129 128 128 ARG ARG A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 PRO 132 131 131 PRO PRO A . n A 1 133 VAL 133 132 132 VAL VAL A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 TYR 136 135 135 TYR TYR A . n A 1 137 ARG 137 136 136 ARG ARG A . n A 1 138 ILE 138 137 137 ILE ILE A . n A 1 139 THR 139 138 138 THR THR A . n A 1 140 TYR 140 139 139 TYR TYR A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 THR 143 142 142 THR THR A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 GLY 145 144 144 GLY GLY A . n A 1 146 ASN 146 145 145 ASN ASN A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 PRO 148 147 147 PRO PRO A . n A 1 149 VAL 149 148 148 VAL VAL A . n A 1 150 GLN 150 149 149 GLN GLN A . n A 1 151 GLU 151 150 150 GLU GLU A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 PRO 155 154 154 PRO PRO A . n A 1 156 GLY 156 155 155 GLY GLY A . n A 1 157 SER 157 156 156 SER SER A . n A 1 158 LYS 158 157 157 LYS LYS A . n A 1 159 SER 159 158 158 SER SER A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 ALA 161 160 160 ALA ALA A . n A 1 162 THR 162 161 161 THR THR A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 SER 164 163 163 SER SER A . n A 1 165 GLY 165 164 164 GLY GLY A . n A 1 166 LEU 166 165 165 LEU LEU A . n A 1 167 LYS 167 166 166 LYS LYS A . n A 1 168 PRO 168 167 167 PRO PRO A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 ASP 171 170 170 ASP ASP A . n A 1 172 TYR 172 171 171 TYR TYR A . n A 1 173 THR 173 172 172 THR THR A . n A 1 174 ILE 174 173 173 ILE ILE A . n A 1 175 THR 175 174 174 THR THR A . n A 1 176 VAL 176 175 175 VAL VAL A . n A 1 177 TYR 177 176 176 TYR TYR A . n A 1 178 ALA 178 177 177 ALA ALA A . n A 1 179 HIS 179 178 178 HIS HIS A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 ASN 181 180 180 ASN ASN A . n A 1 182 TYR 182 181 181 TYR TYR A . n A 1 183 HIS 183 182 182 HIS HIS A . n A 1 184 TYR 184 183 183 TYR TYR A . n A 1 185 TYR 185 184 184 TYR TYR A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 SER 187 186 186 SER SER A . n A 1 188 PRO 188 187 187 PRO PRO A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 SER 190 189 189 SER SER A . n A 1 191 ILE 191 190 190 ILE ILE A . n A 1 192 ASN 192 191 191 ASN ASN A . n A 1 193 TYR 193 192 192 TYR TYR A . n A 1 194 ARG 194 193 193 ARG ARG A . n A 1 195 THR 195 194 ? ? ? A . n B 2 1 PRO 1 6 6 PRO PRO P . n B 2 2 GLN 2 7 7 GLN GLN P . n B 2 3 PRO 3 8 8 PRO PRO P . n B 2 4 VAL 4 9 9 VAL VAL P . n B 2 5 ASP 5 10 10 ASP ASP P . n B 2 6 SER 6 11 11 SER SER P . n B 2 7 TRP 7 12 12 TRP TRP P . n B 2 8 VAL 8 13 13 VAL VAL P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 401 401 MG MG A . D 4 HOH 1 402 501 HOH HOH A . D 4 HOH 2 403 502 HOH HOH A . D 4 HOH 3 404 503 HOH HOH A . D 4 HOH 4 405 505 HOH HOH A . D 4 HOH 5 406 506 HOH HOH A . D 4 HOH 6 407 507 HOH HOH A . D 4 HOH 7 408 509 HOH HOH A . D 4 HOH 8 409 510 HOH HOH A . D 4 HOH 9 410 512 HOH HOH A . D 4 HOH 10 411 513 HOH HOH A . D 4 HOH 11 412 515 HOH HOH A . D 4 HOH 12 413 516 HOH HOH A . D 4 HOH 13 414 517 HOH HOH A . D 4 HOH 14 415 518 HOH HOH A . D 4 HOH 15 416 519 HOH HOH A . D 4 HOH 16 417 520 HOH HOH A . D 4 HOH 17 418 521 HOH HOH A . D 4 HOH 18 419 522 HOH HOH A . D 4 HOH 19 420 523 HOH HOH A . D 4 HOH 20 421 524 HOH HOH A . D 4 HOH 21 422 528 HOH HOH A . D 4 HOH 22 423 529 HOH HOH A . D 4 HOH 23 424 531 HOH HOH A . D 4 HOH 24 425 532 HOH HOH A . D 4 HOH 25 426 533 HOH HOH A . D 4 HOH 26 427 534 HOH HOH A . D 4 HOH 27 428 535 HOH HOH A . D 4 HOH 28 429 536 HOH HOH A . D 4 HOH 29 430 537 HOH HOH A . D 4 HOH 30 431 538 HOH HOH A . D 4 HOH 31 432 539 HOH HOH A . D 4 HOH 32 433 540 HOH HOH A . D 4 HOH 33 434 541 HOH HOH A . D 4 HOH 34 435 542 HOH HOH A . D 4 HOH 35 436 543 HOH HOH A . D 4 HOH 36 437 545 HOH HOH A . D 4 HOH 37 438 546 HOH HOH A . D 4 HOH 38 439 549 HOH HOH A . D 4 HOH 39 440 550 HOH HOH A . D 4 HOH 40 441 551 HOH HOH A . D 4 HOH 41 442 552 HOH HOH A . D 4 HOH 42 443 553 HOH HOH A . D 4 HOH 43 444 554 HOH HOH A . D 4 HOH 44 445 555 HOH HOH A . D 4 HOH 45 446 557 HOH HOH A . D 4 HOH 46 447 558 HOH HOH A . D 4 HOH 47 448 559 HOH HOH A . D 4 HOH 48 449 560 HOH HOH A . D 4 HOH 49 450 561 HOH HOH A . D 4 HOH 50 451 562 HOH HOH A . D 4 HOH 51 452 563 HOH HOH A . D 4 HOH 52 453 564 HOH HOH A . D 4 HOH 53 454 565 HOH HOH A . D 4 HOH 54 455 566 HOH HOH A . D 4 HOH 55 456 568 HOH HOH A . D 4 HOH 56 457 569 HOH HOH A . D 4 HOH 57 458 570 HOH HOH A . D 4 HOH 58 459 571 HOH HOH A . D 4 HOH 59 460 572 HOH HOH A . D 4 HOH 60 461 573 HOH HOH A . D 4 HOH 61 462 574 HOH HOH A . D 4 HOH 62 463 575 HOH HOH A . D 4 HOH 63 464 576 HOH HOH A . D 4 HOH 64 465 577 HOH HOH A . D 4 HOH 65 466 578 HOH HOH A . D 4 HOH 66 467 579 HOH HOH A . D 4 HOH 67 468 580 HOH HOH A . D 4 HOH 68 469 581 HOH HOH A . D 4 HOH 69 470 582 HOH HOH A . D 4 HOH 70 471 583 HOH HOH A . D 4 HOH 71 472 584 HOH HOH A . D 4 HOH 72 473 585 HOH HOH A . D 4 HOH 73 474 586 HOH HOH A . D 4 HOH 74 475 588 HOH HOH A . D 4 HOH 75 476 589 HOH HOH A . D 4 HOH 76 477 590 HOH HOH A . D 4 HOH 77 478 591 HOH HOH A . D 4 HOH 78 479 592 HOH HOH A . D 4 HOH 79 480 593 HOH HOH A . D 4 HOH 80 481 597 HOH HOH A . D 4 HOH 81 482 600 HOH HOH A . D 4 HOH 82 483 601 HOH HOH A . D 4 HOH 83 484 604 HOH HOH A . E 4 HOH 1 14 504 HOH HOH P . E 4 HOH 2 15 508 HOH HOH P . E 4 HOH 3 16 511 HOH HOH P . E 4 HOH 4 17 514 HOH HOH P . E 4 HOH 5 18 544 HOH HOH P . E 4 HOH 6 19 567 HOH HOH P . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3CH8 _cell.length_a 69.008 _cell.length_b 69.008 _cell.length_c 46.706 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CH8 _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 145 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 3CH8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_percent_sol 58.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '31% isopropanol, 0.1M HEPES, 0.2M MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-10-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3CH8 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 20. _reflns.number_all 23031 _reflns.number_obs 23031 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.74 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.512 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.712 _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2256 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CH8 _refine.ls_number_reflns_obs 18126 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 97.63 _refine.ls_R_factor_obs 0.20354 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20071 _refine.ls_R_factor_R_free 0.25984 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 973 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.B_iso_mean 58.924 _refine.aniso_B[1][1] -0.84 _refine.aniso_B[2][2] -0.84 _refine.aniso_B[3][3] 1.27 _refine.aniso_B[1][2] -0.42 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.146 _refine.pdbx_overall_ESU_R_Free 0.152 _refine.overall_SU_ML 0.164 _refine.overall_SU_B 11.257 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1535 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1625 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1575 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.620 1.961 ? 2149 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.627 5.000 ? 199 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.142 23.913 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.709 15.000 ? 239 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.696 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 236 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1221 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.235 0.200 ? 654 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.200 ? 1063 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.141 0.200 ? 97 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.277 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.242 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.993 1.500 ? 1002 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.488 2.000 ? 1605 'X-RAY DIFFRACTION' ? r_scbond_it 2.350 3.000 ? 647 'X-RAY DIFFRACTION' ? r_scangle_it 3.639 4.500 ? 542 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 1183 _refine_ls_shell.R_factor_R_work 0.542 _refine_ls_shell.percent_reflns_obs 88.66 _refine_ls_shell.R_factor_R_free 0.583 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CH8 _struct.title 'The crystal structure of PDZ-Fibronectin fusion protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CH8 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'fibronectin, PDZ, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 3CH8 3CH8 ? 1 ? 1 2 UNP FINC_HUMAN P02751 ? 1 ;VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGD SPASSKPISINYRT ; 1538 3 PDB 3CH8 3CH8 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CH8 A 1 ? 83 ? 3CH8 0 ? 82 ? 0 82 2 2 3CH8 A 104 ? 195 ? P02751 1538 ? 1631 ? 103 194 3 3 3CH8 P 1 ? 8 ? 3CH8 6 ? 13 ? 6 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CH8 GLY A 84 ? PDB ? ? ? linker 83 1 1 3CH8 ASN A 85 ? PDB ? ? ? linker 84 2 1 3CH8 GLY A 86 ? PDB ? ? ? linker 85 3 1 3CH8 ALA A 87 ? PDB ? ? ? linker 86 4 1 3CH8 LYS A 88 ? PDB ? ? ? linker 87 5 1 3CH8 GLN A 89 ? PDB ? ? ? linker 88 6 1 3CH8 GLU A 90 ? PDB ? ? ? linker 89 7 1 3CH8 ILE A 91 ? PDB ? ? ? linker 90 8 1 3CH8 ARG A 92 ? PDB ? ? ? linker 91 9 1 3CH8 VAL A 93 ? PDB ? ? ? linker 92 10 1 3CH8 ARG A 94 ? PDB ? ? ? linker 93 11 1 3CH8 VAL A 95 ? PDB ? ? ? linker 94 12 1 3CH8 GLU A 96 ? PDB ? ? ? linker 95 13 1 3CH8 LYS A 97 ? PDB ? ? ? linker 96 14 1 3CH8 ASP A 98 ? PDB ? ? ? linker 97 15 1 3CH8 GLY A 99 ? PDB ? ? ? linker 98 16 1 3CH8 GLY A 100 ? PDB ? ? ? linker 99 17 1 3CH8 SER A 101 ? PDB ? ? ? linker 100 18 1 3CH8 GLY A 102 ? PDB ? ? ? linker 101 19 1 3CH8 GLY A 103 ? PDB ? ? ? linker 102 20 2 3CH8 SER A 106 ? UNP P02751 ASP 1540 conflict 105 21 2 3CH8 THR A 109 ? UNP P02751 ARG 1543 conflict 108 22 2 3CH8 ASN A 110 ? UNP P02751 ASP 1544 conflict 109 23 2 3CH8 TYR A 128 ? UNP P02751 ? ? insertion 127 24 2 3CH8 ARG A 129 ? UNP P02751 PRO 1562 conflict 128 25 2 3CH8 GLU A 130 ? UNP P02751 ALA 1563 conflict 129 26 2 3CH8 LEU A 131 ? UNP P02751 VAL 1564 conflict 130 27 2 3CH8 PRO A 132 ? UNP P02751 THR 1565 conflict 131 28 2 3CH8 SER A 134 ? UNP P02751 ARG 1567 conflict 133 29 2 3CH8 ? A ? ? UNP P02751 VAL 1612 deletion ? 30 2 3CH8 ? A ? ? UNP P02751 THR 1613 deletion ? 31 2 3CH8 ? A ? ? UNP P02751 GLY 1614 deletion ? 32 2 3CH8 HIS A 179 ? UNP P02751 ARG 1615 conflict 178 33 2 3CH8 TYR A 180 ? UNP P02751 GLY 1616 conflict 179 34 2 3CH8 ASN A 181 ? UNP P02751 ASP 1617 conflict 180 35 2 3CH8 TYR A 182 ? UNP P02751 SER 1618 conflict 181 36 2 3CH8 HIS A 183 ? UNP P02751 PRO 1619 conflict 182 37 2 3CH8 TYR A 184 ? UNP P02751 ALA 1620 conflict 183 38 2 3CH8 TYR A 185 ? UNP P02751 SER 1621 conflict 184 39 2 3CH8 SER A 187 ? UNP P02751 LYS 1623 conflict 186 40 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1750 ? 1 MORE -16 ? 1 'SSA (A^2)' 10170 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 60 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id PHE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 71 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLU _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 59 _struct_conf.end_auth_comp_id PHE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 70 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 86 A . ? GLY 85 A ALA 87 A ? ALA 86 A 1 1.56 2 GLY 99 A . ? GLY 98 A GLY 100 A ? GLY 99 A 1 8.00 3 VAL 107 A . ? VAL 106 A PRO 108 A ? PRO 107 A 1 -1.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 3 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 54 ? SER A 55 ? TYR A 53 SER A 54 A 2 LYS A 47 ? ALA A 51 ? LYS A 46 ALA A 50 A 3 THR A 74 ? ARG A 81 ? THR A 73 ARG A 80 A 4 GLN A 89 ? GLU A 96 ? GLN A 88 GLU A 95 B 1 TYR A 54 ? SER A 55 ? TYR A 53 SER A 54 B 2 LYS A 47 ? ALA A 51 ? LYS A 46 ALA A 50 B 3 ILE A 27 ? VAL A 32 ? ILE A 26 VAL A 31 B 4 PHE A 7 ? GLY A 11 ? PHE A 6 GLY A 10 B 5 ASP B 5 ? TRP B 7 ? ASP P 10 TRP P 12 C 1 THR A 109 ? THR A 117 ? THR A 108 THR A 116 C 2 SER A 120 ? ASP A 126 ? SER A 119 ASP A 125 C 3 THR A 160 ? ILE A 163 ? THR A 159 ILE A 162 D 1 GLN A 150 ? PRO A 155 ? GLN A 149 PRO A 154 D 2 TYR A 135 ? GLU A 142 ? TYR A 134 GLU A 141 D 3 TYR A 172 ? HIS A 179 ? TYR A 171 HIS A 178 D 4 ILE A 189 ? TYR A 193 ? ILE A 188 TYR A 192 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 54 ? O TYR A 53 N ALA A 51 ? N ALA A 50 A 2 3 N ILE A 49 ? N ILE A 48 O ILE A 78 ? O ILE A 77 A 3 4 N LEU A 77 ? N LEU A 76 O VAL A 93 ? O VAL A 92 B 1 2 O TYR A 54 ? O TYR A 53 N ALA A 51 ? N ALA A 50 B 2 3 O ILE A 48 ? O ILE A 47 N ILE A 27 ? N ILE A 26 B 3 4 O THR A 30 ? O THR A 29 N SER A 8 ? N SER A 7 B 4 5 N ILE A 9 ? N ILE A 8 O SER B 6 ? O SER P 11 C 1 2 N THR A 109 ? N THR A 108 O ASP A 126 ? O ASP A 125 C 2 3 N LEU A 121 ? N LEU A 120 O ILE A 163 ? O ILE A 162 D 1 2 O PHE A 152 ? O PHE A 151 N ILE A 138 ? N ILE A 137 D 2 3 N GLY A 141 ? N GLY A 140 O THR A 173 ? O THR A 172 D 3 4 N ILE A 174 ? N ILE A 173 O ILE A 191 ? O ILE A 190 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 2 ? ? -34.63 130.38 2 1 LEU A 40 ? ? -131.53 -41.02 3 1 GLN A 71 ? ? -35.96 -100.20 4 1 ASN A 72 ? ? -145.47 -37.16 5 1 ALA A 86 ? ? -173.72 -177.11 6 1 ASN A 145 ? ? -61.75 97.11 7 1 ASN A 180 ? ? -140.86 -139.28 8 1 SER A 186 ? ? 72.53 50.19 # _pdbx_entry_details.entry_id 3CH8 _pdbx_entry_details.compound_details ;THIS PROTEIN IS A VARIANT OF PREVIOUSLY DEPOSITED FUSION PROTEIN (PDBID: 2QBW). THE CIRCULAR PERMUTATED ERVIN PDZ DOMAIN (UNIPROTKB ENTRY: Q96RT1 RESIDUES 1318-1410) WAS FUSED AT THE N-TERMINUS OF THE 10TH FIBRONECTIN TYPE III DOMAIN OF HUMAN FIBRONECTIN (UNIPROTKB: P02751) VIA GLY-GLY-SER-GLY-GLY LINKER. THE PDZ DOMAIN WAS CIRCULAR PERMUTATED FOR A CERTAIN ORIENTATION. ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A VAL 82 ? A VAL 83 3 1 Y 1 A GLY 83 ? A GLY 84 4 1 Y 1 A ASN 84 ? A ASN 85 5 1 Y 1 A THR 194 ? A THR 195 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MG MG MG N N 216 PHE N N N N 217 PHE CA C N S 218 PHE C C N N 219 PHE O O N N 220 PHE CB C N N 221 PHE CG C Y N 222 PHE CD1 C Y N 223 PHE CD2 C Y N 224 PHE CE1 C Y N 225 PHE CE2 C Y N 226 PHE CZ C Y N 227 PHE OXT O N N 228 PHE H H N N 229 PHE H2 H N N 230 PHE HA H N N 231 PHE HB2 H N N 232 PHE HB3 H N N 233 PHE HD1 H N N 234 PHE HD2 H N N 235 PHE HE1 H N N 236 PHE HE2 H N N 237 PHE HZ H N N 238 PHE HXT H N N 239 PRO N N N N 240 PRO CA C N S 241 PRO C C N N 242 PRO O O N N 243 PRO CB C N N 244 PRO CG C N N 245 PRO CD C N N 246 PRO OXT O N N 247 PRO H H N N 248 PRO HA H N N 249 PRO HB2 H N N 250 PRO HB3 H N N 251 PRO HG2 H N N 252 PRO HG3 H N N 253 PRO HD2 H N N 254 PRO HD3 H N N 255 PRO HXT H N N 256 SER N N N N 257 SER CA C N S 258 SER C C N N 259 SER O O N N 260 SER CB C N N 261 SER OG O N N 262 SER OXT O N N 263 SER H H N N 264 SER H2 H N N 265 SER HA H N N 266 SER HB2 H N N 267 SER HB3 H N N 268 SER HG H N N 269 SER HXT H N N 270 THR N N N N 271 THR CA C N S 272 THR C C N N 273 THR O O N N 274 THR CB C N R 275 THR OG1 O N N 276 THR CG2 C N N 277 THR OXT O N N 278 THR H H N N 279 THR H2 H N N 280 THR HA H N N 281 THR HB H N N 282 THR HG1 H N N 283 THR HG21 H N N 284 THR HG22 H N N 285 THR HG23 H N N 286 THR HXT H N N 287 TRP N N N N 288 TRP CA C N S 289 TRP C C N N 290 TRP O O N N 291 TRP CB C N N 292 TRP CG C Y N 293 TRP CD1 C Y N 294 TRP CD2 C Y N 295 TRP NE1 N Y N 296 TRP CE2 C Y N 297 TRP CE3 C Y N 298 TRP CZ2 C Y N 299 TRP CZ3 C Y N 300 TRP CH2 C Y N 301 TRP OXT O N N 302 TRP H H N N 303 TRP H2 H N N 304 TRP HA H N N 305 TRP HB2 H N N 306 TRP HB3 H N N 307 TRP HD1 H N N 308 TRP HE1 H N N 309 TRP HE3 H N N 310 TRP HZ2 H N N 311 TRP HZ3 H N N 312 TRP HH2 H N N 313 TRP HXT H N N 314 TYR N N N N 315 TYR CA C N S 316 TYR C C N N 317 TYR O O N N 318 TYR CB C N N 319 TYR CG C Y N 320 TYR CD1 C Y N 321 TYR CD2 C Y N 322 TYR CE1 C Y N 323 TYR CE2 C Y N 324 TYR CZ C Y N 325 TYR OH O N N 326 TYR OXT O N N 327 TYR H H N N 328 TYR H2 H N N 329 TYR HA H N N 330 TYR HB2 H N N 331 TYR HB3 H N N 332 TYR HD1 H N N 333 TYR HD2 H N N 334 TYR HE1 H N N 335 TYR HE2 H N N 336 TYR HH H N N 337 TYR HXT H N N 338 VAL N N N N 339 VAL CA C N S 340 VAL C C N N 341 VAL O O N N 342 VAL CB C N N 343 VAL CG1 C N N 344 VAL CG2 C N N 345 VAL OXT O N N 346 VAL H H N N 347 VAL H2 H N N 348 VAL HA H N N 349 VAL HB H N N 350 VAL HG11 H N N 351 VAL HG12 H N N 352 VAL HG13 H N N 353 VAL HG21 H N N 354 VAL HG22 H N N 355 VAL HG23 H N N 356 VAL HXT H N N 357 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 PHE N CA sing N N 205 PHE N H sing N N 206 PHE N H2 sing N N 207 PHE CA C sing N N 208 PHE CA CB sing N N 209 PHE CA HA sing N N 210 PHE C O doub N N 211 PHE C OXT sing N N 212 PHE CB CG sing N N 213 PHE CB HB2 sing N N 214 PHE CB HB3 sing N N 215 PHE CG CD1 doub Y N 216 PHE CG CD2 sing Y N 217 PHE CD1 CE1 sing Y N 218 PHE CD1 HD1 sing N N 219 PHE CD2 CE2 doub Y N 220 PHE CD2 HD2 sing N N 221 PHE CE1 CZ doub Y N 222 PHE CE1 HE1 sing N N 223 PHE CE2 CZ sing Y N 224 PHE CE2 HE2 sing N N 225 PHE CZ HZ sing N N 226 PHE OXT HXT sing N N 227 PRO N CA sing N N 228 PRO N CD sing N N 229 PRO N H sing N N 230 PRO CA C sing N N 231 PRO CA CB sing N N 232 PRO CA HA sing N N 233 PRO C O doub N N 234 PRO C OXT sing N N 235 PRO CB CG sing N N 236 PRO CB HB2 sing N N 237 PRO CB HB3 sing N N 238 PRO CG CD sing N N 239 PRO CG HG2 sing N N 240 PRO CG HG3 sing N N 241 PRO CD HD2 sing N N 242 PRO CD HD3 sing N N 243 PRO OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TRP N CA sing N N 274 TRP N H sing N N 275 TRP N H2 sing N N 276 TRP CA C sing N N 277 TRP CA CB sing N N 278 TRP CA HA sing N N 279 TRP C O doub N N 280 TRP C OXT sing N N 281 TRP CB CG sing N N 282 TRP CB HB2 sing N N 283 TRP CB HB3 sing N N 284 TRP CG CD1 doub Y N 285 TRP CG CD2 sing Y N 286 TRP CD1 NE1 sing Y N 287 TRP CD1 HD1 sing N N 288 TRP CD2 CE2 doub Y N 289 TRP CD2 CE3 sing Y N 290 TRP NE1 CE2 sing Y N 291 TRP NE1 HE1 sing N N 292 TRP CE2 CZ2 sing Y N 293 TRP CE3 CZ3 doub Y N 294 TRP CE3 HE3 sing N N 295 TRP CZ2 CH2 doub Y N 296 TRP CZ2 HZ2 sing N N 297 TRP CZ3 CH2 sing Y N 298 TRP CZ3 HZ3 sing N N 299 TRP CH2 HH2 sing N N 300 TRP OXT HXT sing N N 301 TYR N CA sing N N 302 TYR N H sing N N 303 TYR N H2 sing N N 304 TYR CA C sing N N 305 TYR CA CB sing N N 306 TYR CA HA sing N N 307 TYR C O doub N N 308 TYR C OXT sing N N 309 TYR CB CG sing N N 310 TYR CB HB2 sing N N 311 TYR CB HB3 sing N N 312 TYR CG CD1 doub Y N 313 TYR CG CD2 sing Y N 314 TYR CD1 CE1 sing Y N 315 TYR CD1 HD1 sing N N 316 TYR CD2 CE2 doub Y N 317 TYR CD2 HD2 sing N N 318 TYR CE1 CZ doub Y N 319 TYR CE1 HE1 sing N N 320 TYR CE2 CZ sing Y N 321 TYR CE2 HE2 sing N N 322 TYR CZ OH sing N N 323 TYR OH HH sing N N 324 TYR OXT HXT sing N N 325 VAL N CA sing N N 326 VAL N H sing N N 327 VAL N H2 sing N N 328 VAL CA C sing N N 329 VAL CA CB sing N N 330 VAL CA HA sing N N 331 VAL C O doub N N 332 VAL C OXT sing N N 333 VAL CB CG1 sing N N 334 VAL CB CG2 sing N N 335 VAL CB HB sing N N 336 VAL CG1 HG11 sing N N 337 VAL CG1 HG12 sing N N 338 VAL CG1 HG13 sing N N 339 VAL CG2 HG21 sing N N 340 VAL CG2 HG22 sing N N 341 VAL CG2 HG23 sing N N 342 VAL OXT HXT sing N N 343 # _atom_sites.entry_id 3CH8 _atom_sites.fract_transf_matrix[1][1] 0.014491 _atom_sites.fract_transf_matrix[1][2] 0.008366 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016733 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021411 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O # loop_