HEADER HYDROLASE 07-APR-08 3CRV TITLE XPD_HELICASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XPD/RAD3 RELATED DNA HELICASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.-.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; SOURCE 3 ORGANISM_TAXID: 2285; SOURCE 4 GENE: SACI_0192; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS XPD HELICASE DNA REPAIR CANCER AGING, HELICASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.FAN,A.S.ARVAI,J.A.TAINER REVDAT 8 21-FEB-24 3CRV 1 REMARK REVDAT 7 20-OCT-21 3CRV 1 REMARK SEQADV REVDAT 6 05-SEP-18 3CRV 1 TITLE SOURCE REVDAT 5 24-JAN-18 3CRV 1 AUTHOR REVDAT 4 13-JUL-11 3CRV 1 VERSN REVDAT 3 28-JUL-09 3CRV 1 JRNL REVDAT 2 24-FEB-09 3CRV 1 VERSN REVDAT 1 10-JUN-08 3CRV 0 JRNL AUTH L.FAN,J.O.FUSS,Q.J.CHENG,A.S.ARVAI,M.HAMMEL,V.A.ROBERTS, JRNL AUTH 2 P.K.COOPER,J.A.TAINER JRNL TITL XPD HELICASE STRUCTURES AND ACTIVITIES: INSIGHTS INTO THE JRNL TITL 2 CANCER AND AGING PHENOTYPES FROM XPD MUTATIONS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 133 789 2008 JRNL REFN ISSN 0092-8674 JRNL PMID 18510924 JRNL DOI 10.1016/J.CELL.2008.04.030 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 35040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3498 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3364 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 401 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4505 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.35000 REMARK 3 B22 (A**2) : -2.20000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.30 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 67.28 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CROSS-VALIDATION METHOD: REMARK 3 -> "THROUGHOUT" REMARK 3 REMARK 3 FREE R VALUE TEST SET SELECTION CRITERIA: REMARK 3 -> "RANDOM" REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 POLYMER 4505 NONPOLYMER 55 SOLVENT 259 REMARK 3 REMARK 3 CNS PARAMETER FILES: REMARK 3 CNS_TOPPAR/PROTEIN_REP.PARAM REMARK 3 CNS_TOPPAR/WATER.PARAM REMARK 3 FLC.PAR REMARK 3 ./PAR.FS4 REMARK 3 ./SOL.PAR REMARK 3 CNS TOPOLOGY FILES: REMARK 3 CNS_TOPPAR/PROTEIN.TOP REMARK 3 CNS_TOPPAR/CARBOHYDRATE.TOP REMARK 3 SOL.TOP REMARK 3 TOP.FS4 REMARK 3 FLC.TOP REMARK 4 REMARK 4 3CRV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047137. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12710, 0.97931, 0.97899, REMARK 200 0.91837 REMARK 200 MONOCHROMATOR : SSRL BEAMLINE 11-1 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37102 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 42.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : 0.41000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M CITRATE PH 5.6 15-20% PEG 4000 REMARK 280 10% ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.77100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.14650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.11100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.14650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.77100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.11100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 718 O HOH A 780 1.79 REMARK 500 O HOH A 640 O HOH A 861 1.92 REMARK 500 O HOH A 805 O HOH A 835 2.00 REMARK 500 O HOH A 731 O HOH A 789 2.02 REMARK 500 O HOH A 739 O HOH A 805 2.07 REMARK 500 O HOH A 790 O HOH A 804 2.14 REMARK 500 O HOH A 684 O HOH A 864 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 616 O HOH A 720 3545 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 85 C - N - CA ANGL. DEV. = -12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 3 94.83 57.91 REMARK 500 ARG A 74 163.50 175.04 REMARK 500 LYS A 135 69.73 66.47 REMARK 500 LEU A 172 -39.06 86.75 REMARK 500 ASN A 239 68.51 -109.70 REMARK 500 TYR A 293 117.63 -161.07 REMARK 500 ALA A 394 -147.05 -148.77 REMARK 500 ILE A 433 40.65 -78.72 REMARK 500 SER A 434 32.51 -161.89 REMARK 500 ALA A 435 6.88 -164.17 REMARK 500 ASN A 436 -0.83 -144.62 REMARK 500 ASN A 437 -137.55 67.45 REMARK 500 LYS A 446 30.13 -63.91 REMARK 500 LYS A 448 43.00 80.37 REMARK 500 LEU A 449 95.54 -161.36 REMARK 500 ALA A 450 -98.62 59.61 REMARK 500 GLU A 451 -21.87 62.48 REMARK 500 ARG A 517 -50.14 -144.74 REMARK 500 ASP A 529 126.08 -175.65 REMARK 500 CYS A 543 51.60 -146.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 600 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 88 SG REMARK 620 2 SF4 A 600 S1 115.5 REMARK 620 3 SF4 A 600 S2 110.6 102.3 REMARK 620 4 SF4 A 600 S4 119.5 103.4 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 600 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 102 SG REMARK 620 2 SF4 A 600 S1 116.3 REMARK 620 3 SF4 A 600 S2 101.9 110.6 REMARK 620 4 SF4 A 600 S3 117.5 103.0 107.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 600 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 105 SG REMARK 620 2 SF4 A 600 S1 109.0 REMARK 620 3 SF4 A 600 S3 110.2 104.0 REMARK 620 4 SF4 A 600 S4 119.1 104.9 108.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 600 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 137 SG REMARK 620 2 SF4 A 600 S2 104.7 REMARK 620 3 SF4 A 600 S3 113.2 105.1 REMARK 620 4 SF4 A 600 S4 119.8 107.4 105.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1810 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1811 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 1812 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CRW RELATED DB: PDB REMARK 900 XPD_APO DBREF 3CRV A 1 551 UNP Q4JC68 Q4JC68_SULAC 1 551 SEQADV 3CRV VAL A 2 UNP Q4JC68 LEU 2 ENGINEERED MUTATION SEQRES 1 A 551 MET VAL LYS LEU ARG ASP TRP GLN GLU LYS LEU LYS ASP SEQRES 2 A 551 LYS VAL ILE GLU GLY LEU ARG ASN ASN PHE LEU VAL ALA SEQRES 3 A 551 LEU ASN ALA PRO THR GLY SER GLY LYS THR LEU PHE SER SEQRES 4 A 551 LEU LEU VAL SER LEU GLU VAL LYS PRO LYS VAL LEU PHE SEQRES 5 A 551 VAL VAL ARG THR HIS ASN GLU PHE TYR PRO ILE TYR ARG SEQRES 6 A 551 ASP LEU THR LYS ILE ARG GLU LYS ARG ASN ILE THR PHE SEQRES 7 A 551 SER PHE LEU VAL GLY LYS PRO SER SER CYS LEU TYR ALA SEQRES 8 A 551 GLU LYS GLY ALA GLU SER GLU ASP ILE PRO CYS LYS TYR SEQRES 9 A 551 CYS GLU LEU LYS GLY SER ILE VAL GLU VAL LYS THR ASP SEQRES 10 A 551 ASP SER PRO LEU SER LEU VAL LYS LYS LEU LYS LYS ASP SEQRES 11 A 551 GLY LEU GLN ASP LYS PHE CYS PRO TYR TYR SER LEU LEU SEQRES 12 A 551 ASN SER LEU TYR LYS ALA ASP VAL ILE ALA LEU THR TYR SEQRES 13 A 551 PRO TYR PHE PHE ILE ASP ARG TYR ARG GLU PHE ILE ASP SEQRES 14 A 551 ILE ASP LEU ARG GLU TYR MET ILE VAL ILE ASP GLU ALA SEQRES 15 A 551 HIS ASN LEU ASP LYS VAL ASN GLU LEU GLU GLU ARG SER SEQRES 16 A 551 LEU SER GLU ILE THR ILE GLN MET ALA ILE LYS GLN SER SEQRES 17 A 551 LYS SER GLU GLU SER ARG ARG ILE LEU SER LYS LEU LEU SEQRES 18 A 551 ASN GLN LEU ARG GLU VAL VAL LEU PRO ASP GLU LYS TYR SEQRES 19 A 551 ILE LYS VAL GLU ASN VAL PRO LYS LEU SER LYS GLU GLU SEQRES 20 A 551 LEU GLU ILE LEU ALA ASP ASP TYR GLU ASP ILE ARG LYS SEQRES 21 A 551 ASP SER LEU LYS GLN GLY LYS VAL ASN LYS ILE HIS ILE SEQRES 22 A 551 GLY SER ILE LEU ARG PHE PHE SER LEU LEU SER ILE GLY SEQRES 23 A 551 SER PHE ILE PRO PHE SER TYR SER LYS ARG LEU VAL ILE SEQRES 24 A 551 LYS ASN PRO GLU ILE SER TYR TYR LEU ASN LEU LEU ASN SEQRES 25 A 551 ASP ASN GLU LEU SER ILE ILE LEU MET SER GLY THR LEU SEQRES 26 A 551 PRO PRO ARG GLU TYR MET GLU LYS VAL TRP GLY ILE LYS SEQRES 27 A 551 ARG ASN MET LEU TYR LEU ASP VAL GLU ARG GLU ILE GLN SEQRES 28 A 551 LYS ARG VAL SER GLY SER TYR GLU CYS TYR ILE GLY VAL SEQRES 29 A 551 ASP VAL THR SER LYS TYR ASP MET ARG SER ASP ASN MET SEQRES 30 A 551 TRP LYS ARG TYR ALA ASP TYR LEU LEU LYS ILE TYR PHE SEQRES 31 A 551 GLN ALA LYS ALA ASN VAL LEU VAL VAL PHE PRO SER TYR SEQRES 32 A 551 GLU ILE MET ASP ARG VAL MET SER ARG ILE SER LEU PRO SEQRES 33 A 551 LYS TYR VAL GLU SER GLU ASP SER SER VAL GLU ASP LEU SEQRES 34 A 551 TYR SER ALA ILE SER ALA ASN ASN LYS VAL LEU ILE GLY SEQRES 35 A 551 SER VAL GLY LYS GLY LYS LEU ALA GLU GLY ILE GLU LEU SEQRES 36 A 551 ARG ASN ASN ASP ARG SER LEU ILE SER ASP VAL VAL ILE SEQRES 37 A 551 VAL GLY ILE PRO TYR PRO PRO PRO ASP ASP TYR LEU LYS SEQRES 38 A 551 ILE LEU ALA GLN ARG VAL SER LEU LYS MET ASN ARG GLU SEQRES 39 A 551 ASN GLU GLU PHE LEU PHE LYS ILE PRO ALA LEU VAL THR SEQRES 40 A 551 ILE LYS GLN ALA ILE GLY ARG ALA ILE ARG ASP VAL ASN SEQRES 41 A 551 ASP LYS CYS ASN VAL TRP LEU LEU ASP LYS ARG PHE GLU SEQRES 42 A 551 SER LEU TYR TRP LYS LYS ASN LEU LYS CYS LEU ASN ALA SEQRES 43 A 551 ASN LYS MET LYS LEU HET FLC A1900 13 HET SF4 A 600 8 HET IPA A1804 4 HET IPA A1806 4 HET IPA A1807 4 HET IPA A1808 4 HET IPA A1810 4 HET IPA A1811 4 HET IPA A1812 4 HET GOL A2000 6 HETNAM FLC CITRATE ANION HETNAM SF4 IRON/SULFUR CLUSTER HETNAM IPA ISOPROPYL ALCOHOL HETNAM GOL GLYCEROL HETSYN IPA 2-PROPANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FLC C6 H5 O7 3- FORMUL 3 SF4 FE4 S4 FORMUL 4 IPA 7(C3 H8 O) FORMUL 11 GOL C3 H8 O3 FORMUL 12 HOH *259(H2 O) HELIX 1 1 ARG A 5 ASN A 21 1 17 HELIX 2 2 GLY A 34 LYS A 47 1 14 HELIX 3 3 THR A 56 ASN A 58 5 3 HELIX 4 4 GLU A 59 THR A 68 1 10 HELIX 5 5 GLY A 83 CYS A 88 1 6 HELIX 6 6 GLU A 96 ILE A 100 5 5 HELIX 7 7 PRO A 101 CYS A 105 5 5 HELIX 8 8 SER A 119 LYS A 135 1 17 HELIX 9 9 CYS A 137 LEU A 146 1 10 HELIX 10 10 TYR A 147 ALA A 149 5 3 HELIX 11 11 TYR A 156 ILE A 161 1 6 HELIX 12 12 ILE A 161 GLU A 166 1 6 HELIX 13 13 GLU A 181 GLU A 193 5 13 HELIX 14 14 SER A 197 SER A 208 1 12 HELIX 15 15 SER A 210 ARG A 225 1 16 HELIX 16 16 SER A 244 GLN A 265 1 22 HELIX 17 17 ILE A 271 GLY A 286 1 16 HELIX 18 18 ILE A 304 ASN A 309 1 6 HELIX 19 19 LEU A 310 ASP A 313 5 4 HELIX 20 20 PRO A 327 VAL A 334 1 8 HELIX 21 21 VAL A 346 ILE A 350 1 5 HELIX 22 22 SER A 374 ALA A 392 1 19 HELIX 23 23 SER A 402 SER A 411 1 10 HELIX 24 24 SER A 425 ILE A 433 1 9 HELIX 25 25 ASP A 477 VAL A 487 1 11 HELIX 26 26 ASN A 495 PHE A 500 1 6 HELIX 27 27 PHE A 500 ARG A 514 1 15 HELIX 28 28 LYS A 530 GLU A 533 5 4 HELIX 29 29 SER A 534 LEU A 541 1 8 SHEET 1 A 7 PHE A 78 PHE A 80 0 SHEET 2 A 7 VAL A 151 THR A 155 1 O VAL A 151 N SER A 79 SHEET 3 A 7 LYS A 49 VAL A 54 1 N PHE A 52 O ILE A 152 SHEET 4 A 7 TYR A 175 ILE A 179 1 O VAL A 178 N VAL A 53 SHEET 5 A 7 SER A 317 SER A 322 1 O ILE A 319 N ILE A 179 SHEET 6 A 7 LEU A 24 ASN A 28 1 N LEU A 27 O LEU A 320 SHEET 7 A 7 MET A 341 ASP A 345 1 O LEU A 344 N ASN A 28 SHEET 1 B 4 ARG A 194 LEU A 196 0 SHEET 2 B 4 ARG A 296 LYS A 300 -1 O ILE A 299 N ARG A 194 SHEET 3 B 4 ILE A 289 TYR A 293 -1 N PHE A 291 O VAL A 298 SHEET 4 B 4 ILE A 235 LYS A 236 -1 N ILE A 235 O SER A 292 SHEET 1 C 7 LYS A 417 VAL A 419 0 SHEET 2 C 7 LEU A 440 VAL A 444 1 O GLY A 442 N TYR A 418 SHEET 3 C 7 ASN A 395 PHE A 400 1 N VAL A 396 O ILE A 441 SHEET 4 C 7 ILE A 463 VAL A 469 1 O VAL A 467 N LEU A 397 SHEET 5 C 7 LYS A 522 LEU A 528 1 O TRP A 526 N ILE A 468 SHEET 6 C 7 SER A 357 GLY A 363 1 N TYR A 361 O LEU A 527 SHEET 7 C 7 ASN A 547 MET A 549 1 O ASN A 547 N CYS A 360 SHEET 1 D 2 ARG A 456 ASN A 457 0 SHEET 2 D 2 ARG A 460 SER A 461 -1 O ARG A 460 N ASN A 457 LINK SG CYS A 88 FE3 SF4 A 600 1555 1555 2.26 LINK SG CYS A 102 FE4 SF4 A 600 1555 1555 2.34 LINK SG CYS A 105 FE2 SF4 A 600 1555 1555 2.35 LINK SG CYS A 137 FE1 SF4 A 600 1555 1555 2.24 SITE 1 AC1 6 LYS A 369 TYR A 473 GLU A 496 ARG A 531 SITE 2 AC1 6 TRP A 537 HOH A 717 SITE 1 AC2 6 CYS A 88 ILE A 100 CYS A 102 CYS A 105 SITE 2 AC2 6 LYS A 108 CYS A 137 SITE 1 AC3 6 GLY A 32 SER A 33 GLY A 34 LYS A 35 SITE 2 AC3 6 THR A 36 HOH A 845 SITE 1 AC4 3 ASN A 21 LYS A 530 HOH A 826 SITE 1 AC5 3 SER A 357 TYR A 358 LYS A 542 SITE 1 AC6 3 HIS A 57 GLY A 83 THR A 155 SITE 1 AC7 5 SER A 368 ILE A 471 ARG A 531 HOH A 614 SITE 2 AC7 5 HOH A 701 SITE 1 AC8 4 ARG A 55 ALA A 450 GLU A 451 GLY A 452 SITE 1 AC9 7 ARG A 373 PRO A 401 SER A 402 GLU A 404 SITE 2 AC9 7 ILE A 405 TYR A 473 HOH A 680 CRYST1 53.542 70.222 144.293 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018677 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006930 0.00000