data_3CZ3 # _entry.id 3CZ3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CZ3 pdb_00003cz3 10.2210/pdb3cz3/pdb NDB PR0345 ? ? RCSB RCSB047386 ? ? WWPDB D_1000047386 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3CZ3 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-04-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ma, J.B.' 1 'Li, F.' 2 'Ding, S.W.' 3 'Patel, D.J.' 4 # _citation.id primary _citation.title 'Structural Basis for siRNA Recognition by 2b, a Viral Suppressor of Non-Cell Autonomous RNA Silencing' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ma, J.B.' 1 ? primary 'Li, F.' 2 ? primary 'Ding, S.W.' 3 ? primary 'Patel, D.J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*A)-3') ; 6077.673 2 ? ? ppi-1 ? 2 polymer syn ;RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*G)-3') ; 6054.633 2 ? ? ppi-2 ? 3 polymer man 'Protein 2b' 8305.397 4 ? ? 'Tav2b N69' ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGUACGCGGAAUACUUCGA CGUACGCGGAAUACUUCGA E,G ? 2 polyribonucleotide no no UCGAAGUAUUCCGCGUACG UCGAAGUAUUCCGCGUACG F,H ? 3 'polypeptide(L)' no no SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG SMASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG A,B,C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 U n 1 4 A n 1 5 C n 1 6 G n 1 7 C n 1 8 G n 1 9 G n 1 10 A n 1 11 A n 1 12 U n 1 13 A n 1 14 C n 1 15 U n 1 16 U n 1 17 C n 1 18 G n 1 19 A n 2 1 U n 2 2 C n 2 3 G n 2 4 A n 2 5 A n 2 6 G n 2 7 U n 2 8 A n 2 9 U n 2 10 U n 2 11 C n 2 12 C n 2 13 G n 2 14 C n 2 15 G n 2 16 U n 2 17 A n 2 18 C n 2 19 G n 3 1 SER n 3 2 MET n 3 3 ALA n 3 4 SER n 3 5 ILE n 3 6 GLU n 3 7 ILE n 3 8 PRO n 3 9 LEU n 3 10 HIS n 3 11 GLU n 3 12 ILE n 3 13 ILE n 3 14 ARG n 3 15 LYS n 3 16 LEU n 3 17 GLU n 3 18 ARG n 3 19 MET n 3 20 ASN n 3 21 GLN n 3 22 LYS n 3 23 LYS n 3 24 GLN n 3 25 ALA n 3 26 GLN n 3 27 ARG n 3 28 LYS n 3 29 ARG n 3 30 HIS n 3 31 LYS n 3 32 LEU n 3 33 ASN n 3 34 ARG n 3 35 LYS n 3 36 GLU n 3 37 ARG n 3 38 GLY n 3 39 HIS n 3 40 LYS n 3 41 SER n 3 42 PRO n 3 43 SER n 3 44 GLU n 3 45 GLN n 3 46 ARG n 3 47 ARG n 3 48 SER n 3 49 GLU n 3 50 LEU n 3 51 TRP n 3 52 HIS n 3 53 ALA n 3 54 ARG n 3 55 GLN n 3 56 VAL n 3 57 GLU n 3 58 LEU n 3 59 SER n 3 60 ALA n 3 61 ILE n 3 62 ASN n 3 63 SER n 3 64 ASP n 3 65 ASN n 3 66 SER n 3 67 SER n 3 68 ASP n 3 69 GLU n 3 70 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name TAV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RNA2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Tomato aspermy virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12315 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-Gold(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C E . n A 1 2 G 2 2 2 G G E . n A 1 3 U 3 3 3 U U E . n A 1 4 A 4 4 4 A A E . n A 1 5 C 5 5 5 C C E . n A 1 6 G 6 6 6 G G E . n A 1 7 C 7 7 7 C C E . n A 1 8 G 8 8 8 G G E . n A 1 9 G 9 9 9 G G E . n A 1 10 A 10 10 10 A A E . n A 1 11 A 11 11 11 A A E . n A 1 12 U 12 12 12 U U E . n A 1 13 A 13 13 13 A A E . n A 1 14 C 14 14 14 C C E . n A 1 15 U 15 15 15 U U E . n A 1 16 U 16 16 16 U U E . n A 1 17 C 17 17 17 C C E . n A 1 18 G 18 18 18 G G E . n A 1 19 A 19 19 19 A A E . n B 2 1 U 1 1 1 U U F . n B 2 2 C 2 2 2 C C F . n B 2 3 G 3 3 3 G G F . n B 2 4 A 4 4 4 A A F . n B 2 5 A 5 5 5 A A F . n B 2 6 G 6 6 6 G G F . n B 2 7 U 7 7 7 U U F . n B 2 8 A 8 8 8 A A F . n B 2 9 U 9 9 9 U U F . n B 2 10 U 10 10 10 U U F . n B 2 11 C 11 11 11 C C F . n B 2 12 C 12 12 12 C C F . n B 2 13 G 13 13 13 G G F . n B 2 14 C 14 14 14 C C F . n B 2 15 G 15 15 15 G G F . n B 2 16 U 16 16 16 U U F . n B 2 17 A 17 17 17 A A F . n B 2 18 C 18 18 18 C C F . n B 2 19 G 19 19 19 G G F . n C 1 1 C 1 1 1 C C G . n C 1 2 G 2 2 2 G G G . n C 1 3 U 3 3 3 U U G . n C 1 4 A 4 4 4 A A G . n C 1 5 C 5 5 5 C C G . n C 1 6 G 6 6 6 G G G . n C 1 7 C 7 7 7 C C G . n C 1 8 G 8 8 8 G G G . n C 1 9 G 9 9 9 G G G . n C 1 10 A 10 10 10 A A G . n C 1 11 A 11 11 11 A A G . n C 1 12 U 12 12 12 U U G . n C 1 13 A 13 13 13 A A G . n C 1 14 C 14 14 14 C C G . n C 1 15 U 15 15 15 U U G . n C 1 16 U 16 16 16 U U G . n C 1 17 C 17 17 17 C C G . n C 1 18 G 18 18 18 G G G . n C 1 19 A 19 19 19 A A G . n D 2 1 U 1 1 1 U U H . n D 2 2 C 2 2 2 C C H . n D 2 3 G 3 3 3 G G H . n D 2 4 A 4 4 4 A A H . n D 2 5 A 5 5 5 A A H . n D 2 6 G 6 6 6 G G H . n D 2 7 U 7 7 7 U U H . n D 2 8 A 8 8 8 A A H . n D 2 9 U 9 9 9 U U H . n D 2 10 U 10 10 10 U U H . n D 2 11 C 11 11 11 C C H . n D 2 12 C 12 12 12 C C H . n D 2 13 G 13 13 13 G G H . n D 2 14 C 14 14 14 C C H . n D 2 15 G 15 15 15 G G H . n D 2 16 U 16 16 16 U U H . n D 2 17 A 17 17 17 A A H . n D 2 18 C 18 18 18 C C H . n D 2 19 G 19 19 19 G G H . n E 3 1 SER 1 0 ? ? ? A . n E 3 2 MET 2 1 ? ? ? A . n E 3 3 ALA 3 2 ? ? ? A . n E 3 4 SER 4 3 3 SER SER A . n E 3 5 ILE 5 4 4 ILE ILE A . n E 3 6 GLU 6 5 5 GLU GLU A . n E 3 7 ILE 7 6 6 ILE ILE A . n E 3 8 PRO 8 7 7 PRO PRO A . n E 3 9 LEU 9 8 8 LEU LEU A . n E 3 10 HIS 10 9 9 HIS HIS A . n E 3 11 GLU 11 10 10 GLU GLU A . n E 3 12 ILE 12 11 11 ILE ILE A . n E 3 13 ILE 13 12 12 ILE ILE A . n E 3 14 ARG 14 13 13 ARG ARG A . n E 3 15 LYS 15 14 14 LYS LYS A . n E 3 16 LEU 16 15 15 LEU LEU A . n E 3 17 GLU 17 16 16 GLU GLU A . n E 3 18 ARG 18 17 17 ARG ARG A . n E 3 19 MET 19 18 18 MET MET A . n E 3 20 ASN 20 19 19 ASN ASN A . n E 3 21 GLN 21 20 20 GLN GLN A . n E 3 22 LYS 22 21 21 LYS LYS A . n E 3 23 LYS 23 22 22 LYS LYS A . n E 3 24 GLN 24 23 23 GLN GLN A . n E 3 25 ALA 25 24 24 ALA ALA A . n E 3 26 GLN 26 25 25 GLN GLN A . n E 3 27 ARG 27 26 26 ARG ARG A . n E 3 28 LYS 28 27 27 LYS LYS A . n E 3 29 ARG 29 28 28 ARG ARG A . n E 3 30 HIS 30 29 29 HIS HIS A . n E 3 31 LYS 31 30 30 LYS LYS A . n E 3 32 LEU 32 31 31 LEU LEU A . n E 3 33 ASN 33 32 32 ASN ASN A . n E 3 34 ARG 34 33 33 ARG ARG A . n E 3 35 LYS 35 34 34 LYS LYS A . n E 3 36 GLU 36 35 35 GLU GLU A . n E 3 37 ARG 37 36 36 ARG ARG A . n E 3 38 GLY 38 37 37 GLY GLY A . n E 3 39 HIS 39 38 38 HIS HIS A . n E 3 40 LYS 40 39 39 LYS LYS A . n E 3 41 SER 41 40 40 SER SER A . n E 3 42 PRO 42 41 41 PRO PRO A . n E 3 43 SER 43 42 42 SER SER A . n E 3 44 GLU 44 43 43 GLU GLU A . n E 3 45 GLN 45 44 44 GLN GLN A . n E 3 46 ARG 46 45 45 ARG ARG A . n E 3 47 ARG 47 46 46 ARG ARG A . n E 3 48 SER 48 47 47 SER SER A . n E 3 49 GLU 49 48 48 GLU GLU A . n E 3 50 LEU 50 49 49 LEU LEU A . n E 3 51 TRP 51 50 50 TRP TRP A . n E 3 52 HIS 52 51 51 HIS HIS A . n E 3 53 ALA 53 52 52 ALA ALA A . n E 3 54 ARG 54 53 53 ARG ARG A . n E 3 55 GLN 55 54 54 GLN GLN A . n E 3 56 VAL 56 55 55 VAL VAL A . n E 3 57 GLU 57 56 56 GLU GLU A . n E 3 58 LEU 58 57 57 LEU LEU A . n E 3 59 SER 59 58 58 SER SER A . n E 3 60 ALA 60 59 ? ? ? A . n E 3 61 ILE 61 60 ? ? ? A . n E 3 62 ASN 62 61 ? ? ? A . n E 3 63 SER 63 62 ? ? ? A . n E 3 64 ASP 64 63 ? ? ? A . n E 3 65 ASN 65 64 ? ? ? A . n E 3 66 SER 66 65 ? ? ? A . n E 3 67 SER 67 66 ? ? ? A . n E 3 68 ASP 68 67 ? ? ? A . n E 3 69 GLU 69 68 ? ? ? A . n E 3 70 GLY 70 69 ? ? ? A . n F 3 1 SER 1 0 ? ? ? B . n F 3 2 MET 2 1 ? ? ? B . n F 3 3 ALA 3 2 ? ? ? B . n F 3 4 SER 4 3 3 SER SER B . n F 3 5 ILE 5 4 4 ILE ILE B . n F 3 6 GLU 6 5 5 GLU GLU B . n F 3 7 ILE 7 6 6 ILE ILE B . n F 3 8 PRO 8 7 7 PRO PRO B . n F 3 9 LEU 9 8 8 LEU LEU B . n F 3 10 HIS 10 9 9 HIS HIS B . n F 3 11 GLU 11 10 10 GLU GLU B . n F 3 12 ILE 12 11 11 ILE ILE B . n F 3 13 ILE 13 12 12 ILE ILE B . n F 3 14 ARG 14 13 13 ARG ARG B . n F 3 15 LYS 15 14 14 LYS LYS B . n F 3 16 LEU 16 15 15 LEU LEU B . n F 3 17 GLU 17 16 16 GLU GLU B . n F 3 18 ARG 18 17 17 ARG ARG B . n F 3 19 MET 19 18 18 MET MET B . n F 3 20 ASN 20 19 19 ASN ASN B . n F 3 21 GLN 21 20 20 GLN GLN B . n F 3 22 LYS 22 21 21 LYS LYS B . n F 3 23 LYS 23 22 22 LYS LYS B . n F 3 24 GLN 24 23 23 GLN GLN B . n F 3 25 ALA 25 24 24 ALA ALA B . n F 3 26 GLN 26 25 25 GLN GLN B . n F 3 27 ARG 27 26 26 ARG ARG B . n F 3 28 LYS 28 27 27 LYS LYS B . n F 3 29 ARG 29 28 28 ARG ARG B . n F 3 30 HIS 30 29 29 HIS HIS B . n F 3 31 LYS 31 30 30 LYS LYS B . n F 3 32 LEU 32 31 31 LEU LEU B . n F 3 33 ASN 33 32 32 ASN ASN B . n F 3 34 ARG 34 33 33 ARG ARG B . n F 3 35 LYS 35 34 34 LYS LYS B . n F 3 36 GLU 36 35 35 GLU GLU B . n F 3 37 ARG 37 36 36 ARG ARG B . n F 3 38 GLY 38 37 37 GLY GLY B . n F 3 39 HIS 39 38 38 HIS HIS B . n F 3 40 LYS 40 39 39 LYS LYS B . n F 3 41 SER 41 40 40 SER SER B . n F 3 42 PRO 42 41 41 PRO PRO B . n F 3 43 SER 43 42 42 SER SER B . n F 3 44 GLU 44 43 43 GLU GLU B . n F 3 45 GLN 45 44 44 GLN GLN B . n F 3 46 ARG 46 45 45 ARG ARG B . n F 3 47 ARG 47 46 46 ARG ARG B . n F 3 48 SER 48 47 47 SER SER B . n F 3 49 GLU 49 48 48 GLU GLU B . n F 3 50 LEU 50 49 49 LEU LEU B . n F 3 51 TRP 51 50 50 TRP TRP B . n F 3 52 HIS 52 51 51 HIS HIS B . n F 3 53 ALA 53 52 52 ALA ALA B . n F 3 54 ARG 54 53 53 ARG ARG B . n F 3 55 GLN 55 54 54 GLN GLN B . n F 3 56 VAL 56 55 55 VAL VAL B . n F 3 57 GLU 57 56 56 GLU GLU B . n F 3 58 LEU 58 57 57 LEU LEU B . n F 3 59 SER 59 58 58 SER SER B . n F 3 60 ALA 60 59 ? ? ? B . n F 3 61 ILE 61 60 ? ? ? B . n F 3 62 ASN 62 61 ? ? ? B . n F 3 63 SER 63 62 ? ? ? B . n F 3 64 ASP 64 63 ? ? ? B . n F 3 65 ASN 65 64 ? ? ? B . n F 3 66 SER 66 65 ? ? ? B . n F 3 67 SER 67 66 ? ? ? B . n F 3 68 ASP 68 67 ? ? ? B . n F 3 69 GLU 69 68 ? ? ? B . n F 3 70 GLY 70 69 ? ? ? B . n G 3 1 SER 1 0 ? ? ? C . n G 3 2 MET 2 1 ? ? ? C . n G 3 3 ALA 3 2 ? ? ? C . n G 3 4 SER 4 3 ? ? ? C . n G 3 5 ILE 5 4 ? ? ? C . n G 3 6 GLU 6 5 5 GLU GLU C . n G 3 7 ILE 7 6 6 ILE ILE C . n G 3 8 PRO 8 7 7 PRO PRO C . n G 3 9 LEU 9 8 8 LEU LEU C . n G 3 10 HIS 10 9 9 HIS HIS C . n G 3 11 GLU 11 10 10 GLU GLU C . n G 3 12 ILE 12 11 11 ILE ILE C . n G 3 13 ILE 13 12 12 ILE ILE C . n G 3 14 ARG 14 13 13 ARG ARG C . n G 3 15 LYS 15 14 14 LYS LYS C . n G 3 16 LEU 16 15 15 LEU LEU C . n G 3 17 GLU 17 16 16 GLU GLU C . n G 3 18 ARG 18 17 17 ARG ARG C . n G 3 19 MET 19 18 18 MET MET C . n G 3 20 ASN 20 19 19 ASN ASN C . n G 3 21 GLN 21 20 20 GLN GLN C . n G 3 22 LYS 22 21 21 LYS LYS C . n G 3 23 LYS 23 22 22 LYS LYS C . n G 3 24 GLN 24 23 23 GLN GLN C . n G 3 25 ALA 25 24 24 ALA ALA C . n G 3 26 GLN 26 25 25 GLN GLN C . n G 3 27 ARG 27 26 26 ARG ARG C . n G 3 28 LYS 28 27 27 LYS LYS C . n G 3 29 ARG 29 28 28 ARG ARG C . n G 3 30 HIS 30 29 29 HIS HIS C . n G 3 31 LYS 31 30 30 LYS LYS C . n G 3 32 LEU 32 31 31 LEU LEU C . n G 3 33 ASN 33 32 32 ASN ASN C . n G 3 34 ARG 34 33 33 ARG ARG C . n G 3 35 LYS 35 34 34 LYS LYS C . n G 3 36 GLU 36 35 35 GLU GLU C . n G 3 37 ARG 37 36 36 ARG ARG C . n G 3 38 GLY 38 37 37 GLY GLY C . n G 3 39 HIS 39 38 38 HIS HIS C . n G 3 40 LYS 40 39 39 LYS LYS C . n G 3 41 SER 41 40 40 SER SER C . n G 3 42 PRO 42 41 41 PRO PRO C . n G 3 43 SER 43 42 42 SER SER C . n G 3 44 GLU 44 43 43 GLU GLU C . n G 3 45 GLN 45 44 44 GLN GLN C . n G 3 46 ARG 46 45 45 ARG ARG C . n G 3 47 ARG 47 46 46 ARG ARG C . n G 3 48 SER 48 47 47 SER SER C . n G 3 49 GLU 49 48 48 GLU GLU C . n G 3 50 LEU 50 49 49 LEU LEU C . n G 3 51 TRP 51 50 50 TRP TRP C . n G 3 52 HIS 52 51 51 HIS HIS C . n G 3 53 ALA 53 52 52 ALA ALA C . n G 3 54 ARG 54 53 53 ARG ARG C . n G 3 55 GLN 55 54 54 GLN GLN C . n G 3 56 VAL 56 55 55 VAL VAL C . n G 3 57 GLU 57 56 56 GLU GLU C . n G 3 58 LEU 58 57 57 LEU LEU C . n G 3 59 SER 59 58 58 SER SER C . n G 3 60 ALA 60 59 ? ? ? C . n G 3 61 ILE 61 60 ? ? ? C . n G 3 62 ASN 62 61 ? ? ? C . n G 3 63 SER 63 62 ? ? ? C . n G 3 64 ASP 64 63 ? ? ? C . n G 3 65 ASN 65 64 ? ? ? C . n G 3 66 SER 66 65 ? ? ? C . n G 3 67 SER 67 66 ? ? ? C . n G 3 68 ASP 68 67 ? ? ? C . n G 3 69 GLU 69 68 ? ? ? C . n G 3 70 GLY 70 69 ? ? ? C . n H 3 1 SER 1 0 ? ? ? D . n H 3 2 MET 2 1 ? ? ? D . n H 3 3 ALA 3 2 ? ? ? D . n H 3 4 SER 4 3 3 SER SER D . n H 3 5 ILE 5 4 4 ILE ILE D . n H 3 6 GLU 6 5 5 GLU GLU D . n H 3 7 ILE 7 6 6 ILE ILE D . n H 3 8 PRO 8 7 7 PRO PRO D . n H 3 9 LEU 9 8 8 LEU LEU D . n H 3 10 HIS 10 9 9 HIS HIS D . n H 3 11 GLU 11 10 10 GLU GLU D . n H 3 12 ILE 12 11 11 ILE ILE D . n H 3 13 ILE 13 12 12 ILE ILE D . n H 3 14 ARG 14 13 13 ARG ARG D . n H 3 15 LYS 15 14 14 LYS LYS D . n H 3 16 LEU 16 15 15 LEU LEU D . n H 3 17 GLU 17 16 16 GLU GLU D . n H 3 18 ARG 18 17 17 ARG ARG D . n H 3 19 MET 19 18 18 MET MET D . n H 3 20 ASN 20 19 19 ASN ASN D . n H 3 21 GLN 21 20 20 GLN GLN D . n H 3 22 LYS 22 21 21 LYS LYS D . n H 3 23 LYS 23 22 22 LYS LYS D . n H 3 24 GLN 24 23 23 GLN GLN D . n H 3 25 ALA 25 24 24 ALA ALA D . n H 3 26 GLN 26 25 25 GLN GLN D . n H 3 27 ARG 27 26 26 ARG ARG D . n H 3 28 LYS 28 27 27 LYS LYS D . n H 3 29 ARG 29 28 28 ARG ARG D . n H 3 30 HIS 30 29 29 HIS HIS D . n H 3 31 LYS 31 30 30 LYS LYS D . n H 3 32 LEU 32 31 31 LEU LEU D . n H 3 33 ASN 33 32 32 ASN ASN D . n H 3 34 ARG 34 33 33 ARG ARG D . n H 3 35 LYS 35 34 34 LYS LYS D . n H 3 36 GLU 36 35 35 GLU GLU D . n H 3 37 ARG 37 36 36 ARG ARG D . n H 3 38 GLY 38 37 37 GLY GLY D . n H 3 39 HIS 39 38 38 HIS HIS D . n H 3 40 LYS 40 39 39 LYS LYS D . n H 3 41 SER 41 40 40 SER SER D . n H 3 42 PRO 42 41 41 PRO PRO D . n H 3 43 SER 43 42 42 SER SER D . n H 3 44 GLU 44 43 43 GLU GLU D . n H 3 45 GLN 45 44 44 GLN GLN D . n H 3 46 ARG 46 45 45 ARG ARG D . n H 3 47 ARG 47 46 46 ARG ARG D . n H 3 48 SER 48 47 47 SER SER D . n H 3 49 GLU 49 48 48 GLU GLU D . n H 3 50 LEU 50 49 49 LEU LEU D . n H 3 51 TRP 51 50 50 TRP TRP D . n H 3 52 HIS 52 51 51 HIS HIS D . n H 3 53 ALA 53 52 52 ALA ALA D . n H 3 54 ARG 54 53 53 ARG ARG D . n H 3 55 GLN 55 54 54 GLN GLN D . n H 3 56 VAL 56 55 55 VAL VAL D . n H 3 57 GLU 57 56 56 GLU GLU D . n H 3 58 LEU 58 57 57 LEU LEU D . n H 3 59 SER 59 58 58 SER SER D . n H 3 60 ALA 60 59 ? ? ? D . n H 3 61 ILE 61 60 ? ? ? D . n H 3 62 ASN 62 61 ? ? ? D . n H 3 63 SER 63 62 ? ? ? D . n H 3 64 ASP 64 63 ? ? ? D . n H 3 65 ASN 65 64 ? ? ? D . n H 3 66 SER 66 65 ? ? ? D . n H 3 67 SER 67 66 ? ? ? D . n H 3 68 ASP 68 67 ? ? ? D . n H 3 69 GLU 69 68 ? ? ? D . n H 3 70 GLY 70 69 ? ? ? D . n # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 DM . ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 # _cell.length_a 120.900 _cell.length_b 165.670 _cell.length_c 35.590 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3CZ3 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3CZ3 _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 2 _exptl.entry_id 3CZ3 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '20% PEG 4000, 0.2 M ammonium sulfate, 0.1 M sodium acetate, pH 5.0, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'ammonium sulfate' ? ? ? 1 3 1 'sodium acetate' ? ? ? 1 4 2 'PEG 4000' ? ? ? 1 5 2 'ammonium sulfate' ? ? ? 1 6 2 'sodium acetate' ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 200 ? 1 2 200 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 315' 2006-10-19 ? 2 CCD 'ADSC QUANTUM 315' 2006-10-18 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 MAD ? 1 M x-ray 2 'SINGLE WAVELENGTH' ? 2 M x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97907 1.0 2 0.97927 1.0 3 0.96411 1.0 4 0.97918 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'APS BEAMLINE 24-ID-C' '0.97907, 0.97927, 0.96411' ? APS 24-ID-C 2 SYNCHROTRON 'APS BEAMLINE 24-ID-C' 0.97918 ? APS 24-ID-C # _reflns.entry_id 3CZ3 _reflns.d_resolution_high 3.200 _reflns.d_resolution_low 50.000 _reflns.number_obs 10597 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_netI_over_sigmaI 10.700 _reflns.pdbx_chi_squared 1.040 _reflns.pdbx_redundancy 5.900 _reflns.percent_possible_obs 87.900 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.number_all 12056 _reflns.pdbx_Rsym_value 0.090 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.31 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.574 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_Rsym_value 0.574 _reflns_shell.pdbx_chi_squared 1.081 _reflns_shell.pdbx_redundancy 5.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 803 _reflns_shell.percent_possible_all 69.60 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CZ3 _refine.ls_d_res_high 3.23 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 65.000 _refine.ls_number_reflns_obs 7907 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.231 _refine.ls_R_factor_R_work 0.226 _refine.ls_R_factor_R_free 0.274 _refine.ls_percent_reflns_R_free 9.500 _refine.ls_number_reflns_R_free 755 _refine.B_iso_mean 106.986 _refine.aniso_B[1][1] -0.840 _refine.aniso_B[2][2] 0.650 _refine.aniso_B[3][3] 0.190 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.pdbx_overall_ESU_R_Free 0.899 _refine.overall_SU_ML 0.681 _refine.overall_SU_B 40.541 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I 0.00 _refine.ls_number_reflns_all 12056 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1926 _refine_hist.pdbx_number_atoms_nucleic_acid 3240 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5166 _refine_hist.d_res_high 3.23 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 5566 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 8205 1.467 2.668 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 218 4.758 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 112 31.467 21.786 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 449 20.880 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 36 19.506 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 1017 0.120 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 3004 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1403 0.220 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 3001 0.290 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 148 0.182 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 18 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 1 0.223 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1158 0.490 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1787 0.907 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 5946 0.546 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 6418 1.051 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 3.23 _refine_ls_shell.d_res_low 3.315 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 16.020 _refine_ls_shell.number_reflns_R_work 124 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.498 _refine_ls_shell.R_factor_R_free 0.924 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 13 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 137 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CZ3 _struct.title 'Crystal structure of Tomato Aspermy Virus 2b in complex with siRNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CZ3 _struct_keywords.text 'protein-dsRNA complex, Coiled coil, Nucleus, Suppressor of RNA silencing, VIRAL PROTEIN-RNA COMPLEX' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ORF2B_TAV Q8UYT3 3 MASIEIPLHEIIRKLERMNQKKQAQRKRHKLNRKERGHKSPSEQRRSELWHARQVELSAINSDNSSDEG 1 ? 2 PDB 3CZ3 3CZ3 1 ? ? ? 3 PDB 3CZ3 3CZ3 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CZ3 A 2 ? 70 ? Q8UYT3 1 ? 69 ? 1 69 2 1 3CZ3 B 2 ? 70 ? Q8UYT3 1 ? 69 ? 1 69 3 1 3CZ3 C 2 ? 70 ? Q8UYT3 1 ? 69 ? 1 69 4 1 3CZ3 D 2 ? 70 ? Q8UYT3 1 ? 69 ? 1 69 5 2 3CZ3 E 1 ? 19 ? 3CZ3 1 ? 19 ? 1 19 6 2 3CZ3 G 1 ? 19 ? 3CZ3 1 ? 19 ? 1 19 7 3 3CZ3 F 1 ? 19 ? 3CZ3 1 ? 19 ? 1 19 8 3 3CZ3 H 1 ? 19 ? 3CZ3 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CZ3 SER A 1 ? UNP Q8UYT3 ? ? 'expression tag' 0 1 1 3CZ3 SER B 1 ? UNP Q8UYT3 ? ? 'expression tag' 0 2 1 3CZ3 SER C 1 ? UNP Q8UYT3 ? ? 'expression tag' 0 3 1 3CZ3 SER D 1 ? UNP Q8UYT3 ? ? 'expression tag' 0 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 18170 ? 1 MORE -108.8 ? 1 'SSA (A^2)' 24450 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO E 8 ? GLY E 38 ? PRO A 7 GLY A 37 1 ? 31 HELX_P HELX_P2 2 SER E 41 ? SER E 59 ? SER A 40 SER A 58 1 ? 19 HELX_P HELX_P3 3 PRO F 8 ? GLY F 38 ? PRO B 7 GLY B 37 1 ? 31 HELX_P HELX_P4 4 SER F 41 ? GLU F 57 ? SER B 40 GLU B 56 1 ? 17 HELX_P HELX_P5 5 PRO G 8 ? GLY G 38 ? PRO C 7 GLY C 37 1 ? 31 HELX_P HELX_P6 6 SER G 41 ? VAL G 56 ? SER C 40 VAL C 55 1 ? 16 HELX_P HELX_P7 7 PRO H 8 ? GLY H 38 ? PRO D 7 GLY D 37 1 ? 31 HELX_P HELX_P8 8 SER H 41 ? GLU H 57 ? SER D 40 GLU D 56 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 O2 A ? ? 1_555 B G 19 N2 A ? E C 1 F G 19 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog2 hydrog ? ? A G 2 N1 A ? ? 1_555 B C 18 O2 A ? E G 2 F C 18 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog3 hydrog ? ? A G 2 N2 A ? ? 1_555 B C 18 N3 A ? E G 2 F C 18 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog4 hydrog ? ? A U 3 N3 A ? ? 1_555 B A 17 N1 A ? E U 3 F A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 3 O4 A ? ? 1_555 B A 17 N6 A ? E U 3 F A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 4 N1 A ? ? 1_555 B U 16 N3 A ? E A 4 F U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 4 N6 A ? ? 1_555 B U 16 O4 A ? E A 4 F U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N1 A ? ? 1_555 B A 17 N6 A ? E A 4 F A 17 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog9 hydrog ? ? A C 5 O2 A ? ? 1_555 B G 15 N2 A ? E C 5 F G 15 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog10 hydrog ? ? A G 6 N1 A ? ? 1_555 B C 14 N3 A ? E G 6 F C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 6 N2 A ? ? 1_555 B C 14 O2 A ? E G 6 F C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 6 O6 A ? ? 1_555 B C 14 N4 A ? E G 6 F C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 7 O2 A ? ? 1_555 B G 13 N2 A ? E C 7 F G 13 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog14 hydrog ? ? A G 8 N1 A ? ? 1_555 B C 12 N3 A ? E G 8 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 8 N2 A ? ? 1_555 B C 12 O2 A ? E G 8 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 8 O6 A ? ? 1_555 B C 12 N4 A ? E G 8 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 9 N1 A ? ? 1_555 B C 11 N3 A ? E G 9 F C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 9 N2 A ? ? 1_555 B C 11 O2 A ? E G 9 F C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 9 O6 A ? ? 1_555 B C 11 N4 A ? E G 9 F C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 11 N1 A ? ? 1_555 B U 9 N3 A ? E A 11 F U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 11 N6 A ? ? 1_555 B U 9 O4 A ? E A 11 F U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 12 N3 A ? ? 1_555 B A 8 N1 A ? E U 12 F A 8 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog23 hydrog ? ? A A 13 N1 A ? ? 1_555 B U 7 N3 A ? E A 13 F U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A A 13 N6 A ? ? 1_555 B U 7 O4 A ? E A 13 F U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 14 N3 A ? ? 1_555 B G 6 N1 A ? E C 14 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 14 N4 A ? ? 1_555 B G 6 O6 A ? E C 14 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 14 O2 A ? ? 1_555 B G 6 N2 A ? E C 14 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A U 15 N3 A ? ? 1_555 B A 5 N1 A ? E U 15 F A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 15 O4 A ? ? 1_555 B A 5 N6 A ? E U 15 F A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 16 N3 A ? ? 1_555 B A 4 N1 A ? E U 16 F A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 16 O4 A ? ? 1_555 B A 4 N6 A ? E U 16 F A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 17 O2 A ? ? 1_555 B G 3 N2 A ? E C 17 F G 3 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog33 hydrog ? ? A G 18 N1 A ? ? 1_555 B C 2 N3 A ? E G 18 F C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 18 N2 A ? ? 1_555 B C 2 O2 A ? E G 18 F C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 18 O6 A ? ? 1_555 B C 2 N4 A ? E G 18 F C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 19 N1 A ? ? 1_555 B U 1 N3 A ? E A 19 F U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 19 N6 A ? ? 1_555 B U 1 O4 A ? E A 19 F U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 1 N3 A ? ? 1_555 D G 19 N1 A ? G C 1 H G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C C 1 N4 A ? ? 1_555 D G 19 O6 A ? G C 1 H G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C C 1 O2 A ? ? 1_555 D G 19 N2 A ? G C 1 H G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 2 N1 A ? ? 1_555 D C 18 N3 A ? G G 2 H C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C G 2 N2 A ? ? 1_555 D C 18 O2 A ? G G 2 H C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C G 2 O6 A ? ? 1_555 D C 18 N4 A ? G G 2 H C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C U 3 N3 A ? ? 1_555 D A 17 N1 A ? G U 3 H A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C U 3 O4 A ? ? 1_555 D A 17 N6 A ? G U 3 H A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C A 4 N1 A ? ? 1_555 D U 16 N3 A ? G A 4 H U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C A 4 N6 A ? ? 1_555 D U 16 O4 A ? G A 4 H U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C C 5 N3 A ? ? 1_555 D G 15 N1 A ? G C 5 H G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C C 5 N4 A ? ? 1_555 D G 15 O6 A ? G C 5 H G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C C 5 O2 A ? ? 1_555 D G 15 N2 A ? G C 5 H G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C C 5 N3 A ? ? 1_555 D U 16 N3 A ? G C 5 H U 16 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog52 hydrog ? ? C C 5 N4 A ? ? 1_555 D U 16 O4 A ? G C 5 H U 16 1_555 ? ? ? ? ? ? TYPE_18_PAIR ? ? ? hydrog53 hydrog ? ? C G 6 N1 A ? ? 1_555 D C 14 N3 A ? G G 6 H C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 6 N2 A ? ? 1_555 D C 14 O2 A ? G G 6 H C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C G 6 O6 A ? ? 1_555 D C 14 N4 A ? G G 6 H C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C C 7 N3 A ? ? 1_555 D G 13 N1 A ? G C 7 H G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C C 7 N4 A ? ? 1_555 D G 13 O6 A ? G C 7 H G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C C 7 O2 A ? ? 1_555 D G 13 N2 A ? G C 7 H G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C G 8 N1 A ? ? 1_555 D C 12 N3 A ? G G 8 H C 12 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog60 hydrog ? ? C G 9 N1 A ? ? 1_555 D C 11 N3 A ? G G 9 H C 11 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog61 hydrog ? ? C A 10 N1 A ? ? 1_555 D U 10 N3 A ? G A 10 H U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C A 10 N6 A ? ? 1_555 D U 10 O4 A ? G A 10 H U 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C A 11 N1 A ? ? 1_555 D U 9 N3 A ? G A 11 H U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C A 11 N6 A ? ? 1_555 D U 9 O4 A ? G A 11 H U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C U 12 N3 A ? ? 1_555 D A 8 N1 A ? G U 12 H A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C U 12 O4 A ? ? 1_555 D A 8 N6 A ? G U 12 H A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? C A 13 N1 A ? ? 1_555 D U 7 N3 A ? G A 13 H U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C A 13 N6 A ? ? 1_555 D U 7 O4 A ? G A 13 H U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C C 14 N3 A ? ? 1_555 D G 6 N1 A ? G C 14 H G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C C 14 N4 A ? ? 1_555 D G 6 O6 A ? G C 14 H G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C C 14 O2 A ? ? 1_555 D G 6 N2 A ? G C 14 H G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C U 15 N3 A ? ? 1_555 D A 5 N1 A ? G U 15 H A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C U 15 O4 A ? ? 1_555 D A 5 N6 A ? G U 15 H A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C U 16 N3 A ? ? 1_555 D A 4 N1 A ? G U 16 H A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? C U 16 O4 A ? ? 1_555 D A 4 N6 A ? G U 16 H A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? C C 17 N3 A ? ? 1_555 D G 3 N1 A ? G C 17 H G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? C C 17 N4 A ? ? 1_555 D G 3 O6 A ? G C 17 H G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? C C 17 O2 A ? ? 1_555 D G 3 N2 A ? G C 17 H G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? C G 18 N1 A ? ? 1_555 D C 2 N3 A ? G G 18 H C 2 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP2 _pdbx_validate_close_contact.auth_asym_id_1 G _pdbx_validate_close_contact.auth_comp_id_1 U _pdbx_validate_close_contact.auth_seq_id_1 15 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 40 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.09 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P E C 1 ? A OP3 E C 1 ? A 1.480 1.607 -0.127 0.012 N 2 1 P E C 1 ? B OP3 E C 1 ? B 1.478 1.607 -0.129 0.012 N 3 1 P F U 1 ? A OP3 F U 1 ? A 1.486 1.607 -0.121 0.012 N 4 1 P F U 1 ? B OP3 F U 1 ? B 1.482 1.607 -0.125 0.012 N 5 1 P G C 1 ? A OP3 G C 1 ? A 1.475 1.607 -0.132 0.012 N 6 1 P G C 1 ? B OP3 G C 1 ? B 1.513 1.607 -0.094 0.012 N 7 1 P H U 1 ? A OP3 H U 1 ? A 1.482 1.607 -0.125 0.012 N 8 1 P H U 1 ? B OP3 H U 1 ? B 1.478 1.607 -0.129 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 E C 1 ? A P E C 1 ? A OP2 E C 1 ? A 107.44 119.60 -12.16 1.50 N 2 1 OP1 E C 1 ? B P E C 1 ? B OP2 E C 1 ? B 107.56 119.60 -12.04 1.50 N 3 1 "O3'" E C 5 ? A P E G 6 ? A "O5'" E G 6 ? A 83.34 104.00 -20.66 1.90 Y 4 1 "O3'" E C 5 ? B P E G 6 ? B "O5'" E G 6 ? B 83.65 104.00 -20.35 1.90 Y 5 1 "O3'" E C 5 ? A P E G 6 ? A OP2 E G 6 ? A 87.21 105.20 -17.99 2.20 Y 6 1 "O3'" E C 5 ? B P E G 6 ? B OP2 E G 6 ? B 84.74 105.20 -20.46 2.20 Y 7 1 "O3'" E C 5 ? A P E G 6 ? A OP1 E G 6 ? A 86.32 105.20 -18.88 2.20 Y 8 1 "O3'" E C 5 ? B P E G 6 ? B OP1 E G 6 ? B 86.66 105.20 -18.54 2.20 Y 9 1 OP1 F U 1 ? A P F U 1 ? A OP2 F U 1 ? A 85.53 119.60 -34.07 1.50 N 10 1 OP1 F U 1 ? B P F U 1 ? B OP2 F U 1 ? B 108.39 119.60 -11.21 1.50 N 11 1 "O5'" F U 1 ? A P F U 1 ? A OP2 F U 1 ? A 92.27 105.70 -13.43 0.90 N 12 1 "O4'" F U 1 ? B "C1'" F U 1 ? B N1 F U 1 ? B 112.75 108.50 4.25 0.70 N 13 1 OP1 G C 1 ? A P G C 1 ? A OP2 G C 1 ? A 107.94 119.60 -11.66 1.50 N 14 1 OP1 G C 1 ? B P G C 1 ? B OP2 G C 1 ? B 84.31 119.60 -35.29 1.50 N 15 1 "O5'" G C 1 ? B P G C 1 ? B OP2 G C 1 ? B 90.17 105.70 -15.53 0.90 N 16 1 "C3'" G C 17 ? A "C2'" G C 17 ? A "C1'" G C 17 ? A 96.46 101.30 -4.84 0.70 N 17 1 OP1 H U 1 ? A P H U 1 ? A OP2 H U 1 ? A 108.27 119.60 -11.33 1.50 N 18 1 OP1 H U 1 ? B P H U 1 ? B OP2 H U 1 ? B 107.21 119.60 -12.39 1.50 N 19 1 "O4'" H U 10 ? A "C1'" H U 10 ? A N1 H U 10 ? A 112.99 108.50 4.49 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 17 ? ? -46.88 -70.20 2 1 ARG A 45 ? ? -50.22 -73.63 3 1 ARG A 46 ? ? -29.19 -48.24 4 1 GLU B 56 ? ? -58.59 -3.56 5 1 HIS C 9 ? ? -39.51 -31.38 6 1 ILE C 12 ? ? -44.28 -73.53 7 1 ARG C 46 ? ? -48.18 -15.14 8 1 SER C 47 ? ? -96.80 -60.84 9 1 VAL C 55 ? ? -69.43 7.43 10 1 GLU D 56 ? ? -59.10 4.54 # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 3.300 _diffrn_reflns.pdbx_d_res_low 30.000 _diffrn_reflns.pdbx_number_obs 16831 _diffrn_reflns.pdbx_Rmerge_I_obs 0.052 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.03 _diffrn_reflns.av_sigmaI_over_netI 14.70 _diffrn_reflns.pdbx_redundancy 6.10 _diffrn_reflns.pdbx_percent_possible_obs 87.60 _diffrn_reflns.number 103017 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 7.08 30.00 ? ? 0.034 ? 1.027 7.40 98.10 1 5.63 7.08 ? ? 0.062 ? 0.988 7.60 100.00 1 4.92 5.63 ? ? 0.056 ? 1.034 7.00 97.10 1 4.48 4.92 ? ? 0.056 ? 1.010 6.50 86.10 1 4.16 4.48 ? ? 0.059 ? 1.069 6.30 83.10 1 3.91 4.16 ? ? 0.078 ? 1.066 5.70 86.10 1 3.72 3.91 ? ? 0.099 ? 0.990 5.50 91.10 1 3.55 3.72 ? ? 0.129 ? 1.042 5.10 84.60 1 3.42 3.55 ? ? 0.162 ? 1.025 4.80 81.60 1 3.30 3.42 ? ? 0.170 ? 1.044 4.70 68.20 # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? E SER 1 2 1 Y 1 A MET 1 ? E MET 2 3 1 Y 1 A ALA 2 ? E ALA 3 4 1 Y 1 A ALA 59 ? E ALA 60 5 1 Y 1 A ILE 60 ? E ILE 61 6 1 Y 1 A ASN 61 ? E ASN 62 7 1 Y 1 A SER 62 ? E SER 63 8 1 Y 1 A ASP 63 ? E ASP 64 9 1 Y 1 A ASN 64 ? E ASN 65 10 1 Y 1 A SER 65 ? E SER 66 11 1 Y 1 A SER 66 ? E SER 67 12 1 Y 1 A ASP 67 ? E ASP 68 13 1 Y 1 A GLU 68 ? E GLU 69 14 1 Y 1 A GLY 69 ? E GLY 70 15 1 Y 1 B SER 0 ? F SER 1 16 1 Y 1 B MET 1 ? F MET 2 17 1 Y 1 B ALA 2 ? F ALA 3 18 1 Y 1 B ALA 59 ? F ALA 60 19 1 Y 1 B ILE 60 ? F ILE 61 20 1 Y 1 B ASN 61 ? F ASN 62 21 1 Y 1 B SER 62 ? F SER 63 22 1 Y 1 B ASP 63 ? F ASP 64 23 1 Y 1 B ASN 64 ? F ASN 65 24 1 Y 1 B SER 65 ? F SER 66 25 1 Y 1 B SER 66 ? F SER 67 26 1 Y 1 B ASP 67 ? F ASP 68 27 1 Y 1 B GLU 68 ? F GLU 69 28 1 Y 1 B GLY 69 ? F GLY 70 29 1 Y 1 C SER 0 ? G SER 1 30 1 Y 1 C MET 1 ? G MET 2 31 1 Y 1 C ALA 2 ? G ALA 3 32 1 Y 1 C SER 3 ? G SER 4 33 1 Y 1 C ILE 4 ? G ILE 5 34 1 Y 1 C ALA 59 ? G ALA 60 35 1 Y 1 C ILE 60 ? G ILE 61 36 1 Y 1 C ASN 61 ? G ASN 62 37 1 Y 1 C SER 62 ? G SER 63 38 1 Y 1 C ASP 63 ? G ASP 64 39 1 Y 1 C ASN 64 ? G ASN 65 40 1 Y 1 C SER 65 ? G SER 66 41 1 Y 1 C SER 66 ? G SER 67 42 1 Y 1 C ASP 67 ? G ASP 68 43 1 Y 1 C GLU 68 ? G GLU 69 44 1 Y 1 C GLY 69 ? G GLY 70 45 1 Y 1 D SER 0 ? H SER 1 46 1 Y 1 D MET 1 ? H MET 2 47 1 Y 1 D ALA 2 ? H ALA 3 48 1 Y 1 D ALA 59 ? H ALA 60 49 1 Y 1 D ILE 60 ? H ILE 61 50 1 Y 1 D ASN 61 ? H ASN 62 51 1 Y 1 D SER 62 ? H SER 63 52 1 Y 1 D ASP 63 ? H ASP 64 53 1 Y 1 D ASN 64 ? H ASN 65 54 1 Y 1 D SER 65 ? H SER 66 55 1 Y 1 D SER 66 ? H SER 67 56 1 Y 1 D ASP 67 ? H ASP 68 57 1 Y 1 D GLU 68 ? H GLU 69 58 1 Y 1 D GLY 69 ? H GLY 70 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 ILE N N N N 254 ILE CA C N S 255 ILE C C N N 256 ILE O O N N 257 ILE CB C N S 258 ILE CG1 C N N 259 ILE CG2 C N N 260 ILE CD1 C N N 261 ILE OXT O N N 262 ILE H H N N 263 ILE H2 H N N 264 ILE HA H N N 265 ILE HB H N N 266 ILE HG12 H N N 267 ILE HG13 H N N 268 ILE HG21 H N N 269 ILE HG22 H N N 270 ILE HG23 H N N 271 ILE HD11 H N N 272 ILE HD12 H N N 273 ILE HD13 H N N 274 ILE HXT H N N 275 LEU N N N N 276 LEU CA C N S 277 LEU C C N N 278 LEU O O N N 279 LEU CB C N N 280 LEU CG C N N 281 LEU CD1 C N N 282 LEU CD2 C N N 283 LEU OXT O N N 284 LEU H H N N 285 LEU H2 H N N 286 LEU HA H N N 287 LEU HB2 H N N 288 LEU HB3 H N N 289 LEU HG H N N 290 LEU HD11 H N N 291 LEU HD12 H N N 292 LEU HD13 H N N 293 LEU HD21 H N N 294 LEU HD22 H N N 295 LEU HD23 H N N 296 LEU HXT H N N 297 LYS N N N N 298 LYS CA C N S 299 LYS C C N N 300 LYS O O N N 301 LYS CB C N N 302 LYS CG C N N 303 LYS CD C N N 304 LYS CE C N N 305 LYS NZ N N N 306 LYS OXT O N N 307 LYS H H N N 308 LYS H2 H N N 309 LYS HA H N N 310 LYS HB2 H N N 311 LYS HB3 H N N 312 LYS HG2 H N N 313 LYS HG3 H N N 314 LYS HD2 H N N 315 LYS HD3 H N N 316 LYS HE2 H N N 317 LYS HE3 H N N 318 LYS HZ1 H N N 319 LYS HZ2 H N N 320 LYS HZ3 H N N 321 LYS HXT H N N 322 MET N N N N 323 MET CA C N S 324 MET C C N N 325 MET O O N N 326 MET CB C N N 327 MET CG C N N 328 MET SD S N N 329 MET CE C N N 330 MET OXT O N N 331 MET H H N N 332 MET H2 H N N 333 MET HA H N N 334 MET HB2 H N N 335 MET HB3 H N N 336 MET HG2 H N N 337 MET HG3 H N N 338 MET HE1 H N N 339 MET HE2 H N N 340 MET HE3 H N N 341 MET HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 TRP N N N N 374 TRP CA C N S 375 TRP C C N N 376 TRP O O N N 377 TRP CB C N N 378 TRP CG C Y N 379 TRP CD1 C Y N 380 TRP CD2 C Y N 381 TRP NE1 N Y N 382 TRP CE2 C Y N 383 TRP CE3 C Y N 384 TRP CZ2 C Y N 385 TRP CZ3 C Y N 386 TRP CH2 C Y N 387 TRP OXT O N N 388 TRP H H N N 389 TRP H2 H N N 390 TRP HA H N N 391 TRP HB2 H N N 392 TRP HB3 H N N 393 TRP HD1 H N N 394 TRP HE1 H N N 395 TRP HE3 H N N 396 TRP HZ2 H N N 397 TRP HZ3 H N N 398 TRP HH2 H N N 399 TRP HXT H N N 400 U OP3 O N N 401 U P P N N 402 U OP1 O N N 403 U OP2 O N N 404 U "O5'" O N N 405 U "C5'" C N N 406 U "C4'" C N R 407 U "O4'" O N N 408 U "C3'" C N S 409 U "O3'" O N N 410 U "C2'" C N R 411 U "O2'" O N N 412 U "C1'" C N R 413 U N1 N N N 414 U C2 C N N 415 U O2 O N N 416 U N3 N N N 417 U C4 C N N 418 U O4 O N N 419 U C5 C N N 420 U C6 C N N 421 U HOP3 H N N 422 U HOP2 H N N 423 U "H5'" H N N 424 U "H5''" H N N 425 U "H4'" H N N 426 U "H3'" H N N 427 U "HO3'" H N N 428 U "H2'" H N N 429 U "HO2'" H N N 430 U "H1'" H N N 431 U H3 H N N 432 U H5 H N N 433 U H6 H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 ILE N CA sing N N 252 ILE N H sing N N 253 ILE N H2 sing N N 254 ILE CA C sing N N 255 ILE CA CB sing N N 256 ILE CA HA sing N N 257 ILE C O doub N N 258 ILE C OXT sing N N 259 ILE CB CG1 sing N N 260 ILE CB CG2 sing N N 261 ILE CB HB sing N N 262 ILE CG1 CD1 sing N N 263 ILE CG1 HG12 sing N N 264 ILE CG1 HG13 sing N N 265 ILE CG2 HG21 sing N N 266 ILE CG2 HG22 sing N N 267 ILE CG2 HG23 sing N N 268 ILE CD1 HD11 sing N N 269 ILE CD1 HD12 sing N N 270 ILE CD1 HD13 sing N N 271 ILE OXT HXT sing N N 272 LEU N CA sing N N 273 LEU N H sing N N 274 LEU N H2 sing N N 275 LEU CA C sing N N 276 LEU CA CB sing N N 277 LEU CA HA sing N N 278 LEU C O doub N N 279 LEU C OXT sing N N 280 LEU CB CG sing N N 281 LEU CB HB2 sing N N 282 LEU CB HB3 sing N N 283 LEU CG CD1 sing N N 284 LEU CG CD2 sing N N 285 LEU CG HG sing N N 286 LEU CD1 HD11 sing N N 287 LEU CD1 HD12 sing N N 288 LEU CD1 HD13 sing N N 289 LEU CD2 HD21 sing N N 290 LEU CD2 HD22 sing N N 291 LEU CD2 HD23 sing N N 292 LEU OXT HXT sing N N 293 LYS N CA sing N N 294 LYS N H sing N N 295 LYS N H2 sing N N 296 LYS CA C sing N N 297 LYS CA CB sing N N 298 LYS CA HA sing N N 299 LYS C O doub N N 300 LYS C OXT sing N N 301 LYS CB CG sing N N 302 LYS CB HB2 sing N N 303 LYS CB HB3 sing N N 304 LYS CG CD sing N N 305 LYS CG HG2 sing N N 306 LYS CG HG3 sing N N 307 LYS CD CE sing N N 308 LYS CD HD2 sing N N 309 LYS CD HD3 sing N N 310 LYS CE NZ sing N N 311 LYS CE HE2 sing N N 312 LYS CE HE3 sing N N 313 LYS NZ HZ1 sing N N 314 LYS NZ HZ2 sing N N 315 LYS NZ HZ3 sing N N 316 LYS OXT HXT sing N N 317 MET N CA sing N N 318 MET N H sing N N 319 MET N H2 sing N N 320 MET CA C sing N N 321 MET CA CB sing N N 322 MET CA HA sing N N 323 MET C O doub N N 324 MET C OXT sing N N 325 MET CB CG sing N N 326 MET CB HB2 sing N N 327 MET CB HB3 sing N N 328 MET CG SD sing N N 329 MET CG HG2 sing N N 330 MET CG HG3 sing N N 331 MET SD CE sing N N 332 MET CE HE1 sing N N 333 MET CE HE2 sing N N 334 MET CE HE3 sing N N 335 MET OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 U OP3 P sing N N 395 U OP3 HOP3 sing N N 396 U P OP1 doub N N 397 U P OP2 sing N N 398 U P "O5'" sing N N 399 U OP2 HOP2 sing N N 400 U "O5'" "C5'" sing N N 401 U "C5'" "C4'" sing N N 402 U "C5'" "H5'" sing N N 403 U "C5'" "H5''" sing N N 404 U "C4'" "O4'" sing N N 405 U "C4'" "C3'" sing N N 406 U "C4'" "H4'" sing N N 407 U "O4'" "C1'" sing N N 408 U "C3'" "O3'" sing N N 409 U "C3'" "C2'" sing N N 410 U "C3'" "H3'" sing N N 411 U "O3'" "HO3'" sing N N 412 U "C2'" "O2'" sing N N 413 U "C2'" "C1'" sing N N 414 U "C2'" "H2'" sing N N 415 U "O2'" "HO2'" sing N N 416 U "C1'" N1 sing N N 417 U "C1'" "H1'" sing N N 418 U N1 C2 sing N N 419 U N1 C6 sing N N 420 U C2 O2 doub N N 421 U C2 N3 sing N N 422 U N3 C4 sing N N 423 U N3 H3 sing N N 424 U C4 O4 doub N N 425 U C4 C5 sing N N 426 U C5 C6 doub N N 427 U C5 H5 sing N N 428 U C6 H6 sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3CZ3 'double helix' 3CZ3 'a-form double helix' 3CZ3 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 19 1_555 -0.294 0.489 -0.229 4.003 -5.886 10.691 1 E_C1:G19_F E 1 ? F 19 ? ? 1 1 A G 2 1_555 B C 18 1_555 -0.724 -0.482 -0.272 2.231 -3.384 11.248 2 E_G2:C18_F E 2 ? F 18 ? 22 1 1 A U 3 1_555 B A 17 1_555 -1.771 -0.408 -0.153 1.413 -3.232 7.966 3 E_U3:A17_F E 3 ? F 17 ? 20 1 1 A A 4 1_555 B U 16 1_555 2.524 -0.410 -1.132 -21.412 21.298 -8.253 4 E_A4:U16_F E 4 ? F 16 ? 20 1 1 A C 5 1_555 B G 15 1_555 -0.658 0.374 0.003 -6.422 -2.781 13.679 5 E_C5:G15_F E 5 ? F 15 ? ? 1 1 A G 6 1_555 B C 14 1_555 0.373 0.139 0.524 -15.275 0.910 0.551 6 E_G6:C14_F E 6 ? F 14 ? 19 1 1 A C 7 1_555 B G 13 1_555 -0.158 0.354 -0.332 -1.446 16.684 7.617 7 E_C7:G13_F E 7 ? F 13 ? ? 1 1 A G 8 1_555 B C 12 1_555 -0.412 -0.139 -0.203 3.049 -8.394 -0.574 8 E_G8:C12_F E 8 ? F 12 ? 19 1 1 A G 9 1_555 B C 11 1_555 -0.196 -0.043 -0.524 -9.420 -15.735 3.584 9 E_G9:C11_F E 9 ? F 11 ? 19 1 1 A A 11 1_555 B U 9 1_555 -1.055 -0.617 -0.615 -14.650 12.453 -4.122 10 E_A11:U9_F E 11 ? F 9 ? 20 1 1 A U 12 1_555 B A 8 1_555 0.561 0.383 -0.396 1.373 -4.322 7.146 11 E_U12:A8_F E 12 ? F 8 ? ? ? 1 A A 13 1_555 B U 7 1_555 -0.373 -0.166 -0.150 2.362 -7.419 -4.687 12 E_A13:U7_F E 13 ? F 7 ? 20 1 1 A C 14 1_555 B G 6 1_555 0.429 -0.118 0.882 -10.820 12.725 2.978 13 E_C14:G6_F E 14 ? F 6 ? 19 1 1 A U 15 1_555 B A 5 1_555 -0.768 -0.652 0.295 3.900 3.874 -2.208 14 E_U15:A5_F E 15 ? F 5 ? 20 1 1 A U 16 1_555 B A 4 1_555 -0.331 -0.083 1.324 -15.947 2.913 1.370 15 E_U16:A4_F E 16 ? F 4 ? 20 1 1 A C 17 1_555 B G 3 1_555 -1.831 -0.207 -0.199 11.237 -36.276 7.072 16 E_C17:G3_F E 17 ? F 3 ? ? 1 1 A G 18 1_555 B C 2 1_555 -0.423 -0.092 0.487 -1.900 -9.629 4.433 17 E_G18:C2_F E 18 ? F 2 ? 19 1 1 A A 19 1_555 B U 1 1_555 0.427 -0.286 -0.133 15.730 0.036 -3.705 18 E_A19:U1_F E 19 ? F 1 ? 20 1 1 C C 1 1_555 D G 19 1_555 -0.661 0.326 -0.024 -3.987 -4.051 -5.335 19 G_C1:G19_H G 1 ? H 19 ? 19 1 1 C G 2 1_555 D C 18 1_555 -0.089 -0.232 0.037 -2.967 -11.114 8.087 20 G_G2:C18_H G 2 ? H 18 ? 19 1 1 C U 3 1_555 D A 17 1_555 -1.539 -0.434 -0.130 0.911 -9.322 9.124 21 G_U3:A17_H G 3 ? H 17 ? 20 1 1 C A 4 1_555 D U 16 1_555 0.881 -0.019 -1.570 -20.634 -2.328 -9.444 22 G_A4:U16_H G 4 ? H 16 ? 20 1 1 C C 5 1_555 D G 15 1_555 -0.923 -0.516 -0.696 -2.410 -11.262 -8.344 23 G_C5:G15_H G 5 ? H 15 ? 19 1 1 C G 6 1_555 D C 14 1_555 -0.117 -0.384 0.068 -5.959 1.428 -10.622 24 G_G6:C14_H G 6 ? H 14 ? 19 1 1 C C 7 1_555 D G 13 1_555 -0.037 -0.057 0.338 -11.593 5.783 5.882 25 G_C7:G13_H G 7 ? H 13 ? 19 1 1 C G 8 1_555 D C 12 1_555 -0.486 0.467 0.104 17.804 -2.046 0.707 26 G_G8:C12_H G 8 ? H 12 ? ? 1 1 C G 9 1_555 D C 11 1_555 -0.094 0.445 -0.360 -19.777 -2.948 12.401 27 G_G9:C11_H G 9 ? H 11 ? ? 1 1 C A 10 1_555 D U 10 1_555 -0.632 -0.448 0.536 1.067 4.168 -7.610 28 G_A10:U10_H G 10 ? H 10 ? 20 1 1 C A 11 1_555 D U 9 1_555 0.518 -0.344 -0.115 -4.289 5.157 -11.359 29 G_A11:U9_H G 11 ? H 9 ? 20 1 1 C U 12 1_555 D A 8 1_555 -0.386 -0.217 -1.041 17.777 -2.120 5.704 30 G_U12:A8_H G 12 ? H 8 ? 20 1 1 C A 13 1_555 D U 7 1_555 0.907 -0.078 -0.880 -18.576 -7.486 0.066 31 G_A13:U7_H G 13 ? H 7 ? 20 1 1 C C 14 1_555 D G 6 1_555 0.654 0.176 -0.071 -3.318 1.613 7.273 32 G_C14:G6_H G 14 ? H 6 ? 19 1 1 C U 15 1_555 D A 5 1_555 -1.311 -0.229 -0.359 -3.927 2.155 -3.125 33 G_U15:A5_H G 15 ? H 5 ? 20 1 1 C U 16 1_555 D A 4 1_555 -1.107 -0.082 0.428 0.517 -8.743 -1.814 34 G_U16:A4_H G 16 ? H 4 ? 20 1 1 C C 17 1_555 D G 3 1_555 -2.025 -0.347 0.883 -18.308 -9.633 -13.014 35 G_C17:G3_H G 17 ? H 3 ? 19 1 1 C G 18 1_555 D C 2 1_555 -0.249 0.173 0.875 -4.421 -14.272 1.534 36 G_G18:C2_H G 18 ? H 2 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 19 1_555 A G 2 1_555 B C 18 1_555 0.925 -0.936 3.039 0.978 18.369 30.542 -3.847 -1.392 2.175 31.537 -1.680 35.540 1 EE_C1G2:C18G19_FF E 1 ? F 19 ? E 2 ? F 18 ? 1 A G 2 1_555 B C 18 1_555 A U 3 1_555 B A 17 1_555 0.901 -1.523 3.305 1.076 -1.494 26.709 -2.891 -1.658 3.416 -3.228 -2.325 26.771 2 EE_G2U3:A17C18_FF E 2 ? F 18 ? E 3 ? F 17 ? 1 A U 3 1_555 B A 17 1_555 A A 4 1_555 B U 16 1_555 -0.920 -1.823 3.295 7.179 26.164 52.213 -3.081 1.275 2.108 27.713 -7.604 58.399 3 EE_U3A4:U16A17_FF E 3 ? F 17 ? E 4 ? F 16 ? 1 A A 4 1_555 B U 16 1_555 A C 5 1_555 B G 15 1_555 0.310 -1.490 2.898 -5.898 6.335 15.143 -7.963 -3.858 1.878 21.864 20.353 17.430 4 EE_A4C5:G15U16_FF E 4 ? F 16 ? E 5 ? F 15 ? 1 A C 5 1_555 B G 15 1_555 A G 6 1_555 B C 14 1_555 -1.601 -1.856 3.796 -9.478 -4.797 33.933 -2.154 0.869 4.291 -7.980 15.767 35.511 5 EE_C5G6:C14G15_FF E 5 ? F 15 ? E 6 ? F 14 ? 1 A G 6 1_555 B C 14 1_555 A C 7 1_555 B G 13 1_555 -0.157 -1.689 2.876 -3.725 0.705 23.514 -4.294 -0.690 2.816 1.715 9.065 23.813 6 EE_G6C7:G13C14_FF E 6 ? F 14 ? E 7 ? F 13 ? 1 A C 7 1_555 B G 13 1_555 A G 8 1_555 B C 12 1_555 -0.626 -1.381 3.104 -1.373 2.488 28.977 -3.257 0.964 3.003 4.956 2.736 29.113 7 EE_C7G8:C12G13_FF E 7 ? F 13 ? E 8 ? F 12 ? 1 A G 8 1_555 B C 12 1_555 A G 9 1_555 B C 11 1_555 0.102 -2.135 4.072 0.996 2.242 30.906 -4.522 0.044 3.912 4.200 -1.866 31.001 8 EE_G8G9:C11C12_FF E 8 ? F 12 ? E 9 ? F 11 ? 1 A A 11 1_555 B U 9 1_555 A U 12 1_555 B A 8 1_555 0.938 -1.489 2.733 -0.030 1.522 42.145 -2.199 -1.306 2.680 2.116 0.041 42.172 9 EE_A11U12:A8U9_FF E 11 ? F 9 ? E 12 ? F 8 ? 1 A U 12 1_555 B A 8 1_555 A A 13 1_555 B U 7 1_555 -0.318 -1.805 3.487 1.217 0.307 24.234 -4.397 1.165 3.445 0.730 -2.897 24.266 10 EE_U12A13:U7A8_FF E 12 ? F 8 ? E 13 ? F 7 ? 1 A A 13 1_555 B U 7 1_555 A C 14 1_555 B G 6 1_555 0.635 -2.337 3.715 -6.476 3.164 33.119 -4.564 -2.222 3.304 5.471 11.196 33.873 11 EE_A13C14:G6U7_FF E 13 ? F 7 ? E 14 ? F 6 ? 1 A C 14 1_555 B G 6 1_555 A U 15 1_555 B A 5 1_555 -0.393 -2.457 2.396 7.462 -0.209 25.790 -5.257 2.232 2.216 -0.457 -16.289 26.831 12 EE_C14U15:A5G6_FF E 14 ? F 6 ? E 15 ? F 5 ? 1 A U 15 1_555 B A 5 1_555 A U 16 1_555 B A 4 1_555 -0.186 -2.169 3.566 -16.278 8.648 31.244 -4.750 -2.061 2.671 14.577 27.438 36.159 13 EE_U15U16:A4A5_FF E 15 ? F 5 ? E 16 ? F 4 ? 1 A U 16 1_555 B A 4 1_555 A C 17 1_555 B G 3 1_555 -0.022 -2.279 2.526 14.372 -7.176 22.592 -3.246 3.093 2.642 -15.977 -32.001 27.660 14 EE_U16C17:G3A4_FF E 16 ? F 4 ? E 17 ? F 3 ? 1 A C 17 1_555 B G 3 1_555 A G 18 1_555 B C 2 1_555 0.131 -1.390 3.367 -13.969 12.850 37.257 -3.262 -1.607 2.569 18.702 20.331 41.660 15 EE_C17G18:C2G3_FF E 17 ? F 3 ? E 18 ? F 2 ? 1 A G 18 1_555 B C 2 1_555 A A 19 1_555 B U 1 1_555 -1.375 -1.907 3.131 2.878 3.609 35.764 -3.548 2.593 2.816 5.847 -4.662 36.051 16 EE_G18A19:U1C2_FF E 18 ? F 2 ? E 19 ? F 1 ? 1 C C 1 1_555 D G 19 1_555 C G 2 1_555 D C 18 1_555 0.822 -0.766 3.353 -0.614 6.390 34.903 -2.197 -1.439 3.154 10.544 1.013 35.470 17 GG_C1G2:C18G19_HH G 1 ? H 19 ? G 2 ? H 18 ? 1 C G 2 1_555 D C 18 1_555 C U 3 1_555 D A 17 1_555 0.929 -2.277 3.236 3.250 -2.822 21.462 -4.839 -1.113 3.601 -7.480 -8.616 21.884 18 GG_G2U3:A17C18_HH G 2 ? H 18 ? G 3 ? H 17 ? 1 C U 3 1_555 D A 17 1_555 C A 4 1_555 D U 16 1_555 -0.630 -1.522 3.923 13.086 15.620 46.179 -3.041 1.788 3.021 18.873 -15.811 50.249 19 GG_U3A4:U16A17_HH G 3 ? H 17 ? G 4 ? H 16 ? 1 C A 4 1_555 D U 16 1_555 C C 5 1_555 D G 15 1_555 -0.058 -1.985 2.408 -4.336 15.835 13.800 -8.368 -0.672 0.108 48.431 13.261 21.417 20 GG_A4C5:G15U16_HH G 4 ? H 16 ? G 5 ? H 15 ? 1 C C 5 1_555 D G 15 1_555 C G 6 1_555 D C 14 1_555 -0.711 -2.296 3.311 -10.609 -1.214 33.514 -3.612 -0.501 3.449 -2.042 17.844 35.128 21 GG_C5G6:C14G15_HH G 5 ? H 15 ? G 6 ? H 14 ? 1 C G 6 1_555 D C 14 1_555 C C 7 1_555 D G 13 1_555 0.311 -1.840 3.703 -7.659 2.904 30.384 -3.991 -2.145 3.341 5.418 14.290 31.443 22 GG_G6C7:G13C14_HH G 6 ? H 14 ? G 7 ? H 13 ? 1 C C 7 1_555 D G 13 1_555 C G 8 1_555 D C 12 1_555 -0.161 -1.208 2.560 0.609 -8.761 26.744 -0.758 0.452 2.803 -18.323 -1.273 28.124 23 GG_C7G8:C12G13_HH G 7 ? H 13 ? G 8 ? H 12 ? 1 C G 8 1_555 D C 12 1_555 C G 9 1_555 D C 11 1_555 0.336 -2.113 4.437 1.397 10.508 31.365 -5.948 -0.293 3.574 18.776 -2.497 33.066 24 GG_G8G9:C11C12_HH G 8 ? H 12 ? G 9 ? H 11 ? 1 C G 9 1_555 D C 11 1_555 C A 10 1_555 D U 10 1_555 -0.432 -3.104 2.597 -7.154 -0.806 19.731 -8.235 -1.347 2.707 -2.258 20.035 20.991 25 GG_G9A10:U10C11_HH G 9 ? H 11 ? G 10 ? H 10 ? 1 C A 10 1_555 D U 10 1_555 C A 11 1_555 D U 9 1_555 -1.671 -2.687 3.121 0.653 8.278 28.697 -6.656 3.358 2.238 16.276 -1.284 29.850 26 GG_A10A11:U9U10_HH G 10 ? H 10 ? G 11 ? H 9 ? 1 C A 11 1_555 D U 9 1_555 C U 12 1_555 D A 8 1_555 1.161 -2.047 2.989 5.127 -7.109 27.172 -2.492 -1.158 3.555 -14.656 -10.570 28.525 27 GG_A11U12:A8U9_HH G 11 ? H 9 ? G 12 ? H 8 ? 1 C U 12 1_555 D A 8 1_555 C A 13 1_555 D U 7 1_555 -0.120 -1.774 4.774 3.633 18.050 37.558 -5.063 0.686 3.569 26.198 -5.273 41.681 28 GG_U12A13:U7A8_HH G 12 ? H 8 ? G 13 ? H 7 ? 1 C A 13 1_555 D U 7 1_555 C C 14 1_555 D G 6 1_555 0.264 -1.376 3.059 -6.388 -4.929 27.983 -1.699 -1.872 3.116 -9.934 12.875 29.100 29 GG_A13C14:G6U7_HH G 13 ? H 7 ? G 14 ? H 6 ? 1 C C 14 1_555 D G 6 1_555 C U 15 1_555 D A 5 1_555 -0.606 -2.179 3.241 0.714 9.157 23.134 -7.440 1.592 2.209 21.764 -1.696 24.867 30 GG_C14U15:A5G6_HH G 14 ? H 6 ? G 15 ? H 5 ? 1 C U 15 1_555 D A 5 1_555 C U 16 1_555 D A 4 1_555 -0.336 -1.621 3.291 -6.744 -0.631 31.261 -2.827 -0.637 3.321 -1.154 12.335 31.969 31 GG_U15U16:A4A5_HH G 15 ? H 5 ? G 16 ? H 4 ? 1 C U 16 1_555 D A 4 1_555 C C 17 1_555 D G 3 1_555 -0.332 -2.418 3.608 -9.739 6.763 24.473 -6.904 -1.820 2.781 14.888 21.440 27.154 32 GG_U16C17:G3A4_HH G 16 ? H 4 ? G 17 ? H 3 ? 1 C C 17 1_555 D G 3 1_555 C G 18 1_555 D C 2 1_555 0.434 -2.078 2.566 -4.022 0.772 39.248 -3.149 -1.009 2.472 1.146 5.968 39.453 33 GG_C17G18:C2G3_HH G 17 ? H 3 ? G 18 ? H 2 ? # _atom_sites.entry_id 3CZ3 _atom_sites.fract_transf_matrix[1][1] 0.008271 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006036 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028098 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_