data_3D33 # _entry.id 3D33 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3D33 pdb_00003d33 10.2210/pdb3d33/pdb RCSB RCSB047530 ? ? WWPDB D_1000047530 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 390198 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3D33 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-05-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Domain of Unknown Function with an Immunoglobulin-like Beta-sandwich Fold (YP_001297618.1) from Bacteroides vulgatus ATCC 8482 at 1.70 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3D33 _cell.length_a 44.562 _cell.length_b 55.179 _cell.length_c 47.116 _cell.angle_alpha 90.000 _cell.angle_beta 94.310 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D33 _symmetry.Int_Tables_number 4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Domain of Unknown Function with an Immunoglobulin-like Beta-sandwich Fold' 11948.939 2 ? ? ? ? 2 water nat water 18.015 283 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GANTTETPVKDVELDGRWDDPIRSAATNCPITVFTDGYLLTLKNASPDRD(MSE)TIRITD(MSE)AKGGVVYENDIPEV QSAYITISIANFPAEEYKLEITGTPSGHLTGYFTKE ; _entity_poly.pdbx_seq_one_letter_code_can ;GANTTETPVKDVELDGRWDDPIRSAATNCPITVFTDGYLLTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITIS IANFPAEEYKLEITGTPSGHLTGYFTKE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 390198 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 ASN n 1 4 THR n 1 5 THR n 1 6 GLU n 1 7 THR n 1 8 PRO n 1 9 VAL n 1 10 LYS n 1 11 ASP n 1 12 VAL n 1 13 GLU n 1 14 LEU n 1 15 ASP n 1 16 GLY n 1 17 ARG n 1 18 TRP n 1 19 ASP n 1 20 ASP n 1 21 PRO n 1 22 ILE n 1 23 ARG n 1 24 SER n 1 25 ALA n 1 26 ALA n 1 27 THR n 1 28 ASN n 1 29 CYS n 1 30 PRO n 1 31 ILE n 1 32 THR n 1 33 VAL n 1 34 PHE n 1 35 THR n 1 36 ASP n 1 37 GLY n 1 38 TYR n 1 39 LEU n 1 40 LEU n 1 41 THR n 1 42 LEU n 1 43 LYS n 1 44 ASN n 1 45 ALA n 1 46 SER n 1 47 PRO n 1 48 ASP n 1 49 ARG n 1 50 ASP n 1 51 MSE n 1 52 THR n 1 53 ILE n 1 54 ARG n 1 55 ILE n 1 56 THR n 1 57 ASP n 1 58 MSE n 1 59 ALA n 1 60 LYS n 1 61 GLY n 1 62 GLY n 1 63 VAL n 1 64 VAL n 1 65 TYR n 1 66 GLU n 1 67 ASN n 1 68 ASP n 1 69 ILE n 1 70 PRO n 1 71 GLU n 1 72 VAL n 1 73 GLN n 1 74 SER n 1 75 ALA n 1 76 TYR n 1 77 ILE n 1 78 THR n 1 79 ILE n 1 80 SER n 1 81 ILE n 1 82 ALA n 1 83 ASN n 1 84 PHE n 1 85 PRO n 1 86 ALA n 1 87 GLU n 1 88 GLU n 1 89 TYR n 1 90 LYS n 1 91 LEU n 1 92 GLU n 1 93 ILE n 1 94 THR n 1 95 GLY n 1 96 THR n 1 97 PRO n 1 98 SER n 1 99 GLY n 1 100 HIS n 1 101 LEU n 1 102 THR n 1 103 GLY n 1 104 TYR n 1 105 PHE n 1 106 THR n 1 107 LYS n 1 108 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YP_001297618.1, BVU_0276' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides vulgatus ATCC 8482' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435590 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6KX32_BACV8 _struct_ref.pdbx_db_accession A6KX32 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ANTTETPVKDVELDGRWDDPIRSAATNCPITVFTDGYLLTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISI ANFPAEEYKLEITGTPSGHLTGYFTKE ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3D33 A 2 ? 108 ? A6KX32 28 ? 134 ? 28 134 2 1 3D33 B 2 ? 108 ? A6KX32 28 ? 134 ? 28 134 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3D33 GLY A 1 ? UNP A6KX32 ? ? 'expression tag' 27 1 2 3D33 GLY B 1 ? UNP A6KX32 ? ? 'expression tag' 27 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3D33 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.9 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M MgFormate, 20.0000% PEG-3350, No Buffer pH 5.9, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-04-11 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3D33 _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 28.677 _reflns.number_obs 25116 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_netI_over_sigmaI 4.600 _reflns.pdbx_Rsym_value 0.098 _reflns.pdbx_redundancy 7.400 _reflns.percent_possible_obs 99.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 24.306 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.74 ? 12323 ? 0.871 0.9 0.871 ? 7.00 ? 1763 95.70 1 1 1.74 1.79 ? 13415 ? 0.696 1.1 0.696 ? 7.40 ? 1803 100.00 2 1 1.79 1.84 ? 13163 ? 0.550 1.4 0.550 ? 7.40 ? 1769 100.00 3 1 1.84 1.90 ? 12677 ? 0.432 1.8 0.432 ? 7.50 ? 1698 100.00 4 1 1.90 1.96 ? 12476 ? 0.335 2.2 0.335 ? 7.40 ? 1675 100.00 5 1 1.96 2.03 ? 11840 ? 0.250 2.9 0.250 ? 7.40 ? 1594 100.00 6 1 2.03 2.11 ? 11366 ? 0.203 3.6 0.203 ? 7.40 ? 1530 100.00 7 1 2.11 2.19 ? 11136 ? 0.177 4.1 0.177 ? 7.40 ? 1495 100.00 8 1 2.19 2.29 ? 10606 ? 0.157 4.5 0.157 ? 7.40 ? 1425 100.00 9 1 2.29 2.40 ? 10194 ? 0.139 5.0 0.139 ? 7.40 ? 1370 100.00 10 1 2.40 2.53 ? 9715 ? 0.123 5.5 0.123 ? 7.50 ? 1303 100.00 11 1 2.53 2.69 ? 9233 ? 0.105 6.3 0.105 ? 7.40 ? 1240 100.00 12 1 2.69 2.87 ? 8635 ? 0.095 6.6 0.095 ? 7.50 ? 1156 100.00 13 1 2.87 3.10 ? 8099 ? 0.084 7.6 0.084 ? 7.50 ? 1083 100.00 14 1 3.10 3.40 ? 7440 ? 0.073 8.3 0.073 ? 7.50 ? 996 100.00 15 1 3.40 3.80 ? 6694 ? 0.067 8.7 0.067 ? 7.50 ? 896 100.00 16 1 3.80 4.39 ? 6017 ? 0.066 8.8 0.066 ? 7.40 ? 809 100.00 17 1 4.39 5.38 ? 5004 ? 0.068 8.6 0.068 ? 7.30 ? 681 100.00 18 1 5.38 7.60 ? 3807 ? 0.072 8.7 0.072 ? 7.10 ? 534 100.00 19 1 7.60 28.68 ? 1979 ? 0.063 9.4 0.063 ? 6.70 ? 296 97.20 20 1 # _refine.entry_id 3D33 _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 28.677 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.630 _refine.ls_number_reflns_obs 25099 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 4. THE FOLLOWING REGIONS ARE DISORDERED: A/B0, A/B28-33, A47-53, B46-53. ; _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.220 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1283 _refine.B_iso_mean 18.342 _refine.aniso_B[1][1] 0.370 _refine.aniso_B[2][2] 0.320 _refine.aniso_B[3][3] -0.700 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.050 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.pdbx_overall_ESU_R 0.098 _refine.pdbx_overall_ESU_R_Free 0.104 _refine.overall_SU_ML 0.068 _refine.overall_SU_B 3.951 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1439 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 283 _refine_hist.number_atoms_total 1722 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 28.677 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1532 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1019 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2099 1.494 1.977 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2516 0.845 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 205 6.224 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 64 41.188 25.156 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 259 12.758 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 16.805 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 244 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1708 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 288 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 235 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1061 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 712 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 876 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 191 0.116 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 10 0.134 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 21 0.180 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 19 0.171 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1033 1.914 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 391 0.552 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1579 2.717 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 625 4.374 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 509 5.982 11.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 'MEDIUM POSITIONAL' A 553 0.120 0.500 1 'X-RAY DIFFRACTION' 1 ? ? ? 1 'LOOSE POSITIONAL' A 664 0.360 5.000 1 'X-RAY DIFFRACTION' 2 ? ? ? 1 'MEDIUM THERMAL' A 553 0.580 2.000 1 'X-RAY DIFFRACTION' 3 ? ? ? 1 'LOOSE THERMAL' A 664 1.150 10.000 1 'X-RAY DIFFRACTION' 4 ? ? ? # _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.440 _refine_ls_shell.number_reflns_R_work 1685 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.270 _refine_ls_shell.R_factor_R_free 0.365 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1759 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 1 A 8 A 108 5 . . PRO GLU A 34 A 134 1 ? 2 1 B 8 B 108 5 . . PRO GLU B 34 B 134 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3D33 _struct.title ;Crystal structure of a duf3244 family protein with an immunoglobulin-like beta-sandwich fold (bvu_0276) from bacteroides vulgatus atcc 8482 at 1.70 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3D33 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ;AUTHORS STATE THAT ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY (anSEC) SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 70 ? SER A 74 ? PRO A 96 SER A 100 5 ? 5 HELX_P HELX_P2 2 PRO B 70 ? SER B 74 ? PRO B 96 SER B 100 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 50 C ? ? ? 1_555 A MSE 51 N ? ? A ASP 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale2 covale both ? A MSE 51 C ? ? ? 1_555 A THR 52 N ? ? A MSE 77 A THR 78 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A ASP 57 C ? ? ? 1_555 A MSE 58 N ? ? A ASP 83 A MSE 84 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? A MSE 58 C ? ? ? 1_555 A ALA 59 N ? ? A MSE 84 A ALA 85 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? B ASP 50 C ? ? ? 1_555 B MSE 51 N ? ? B ASP 76 B MSE 77 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? B MSE 51 C ? ? ? 1_555 B THR 52 N ? ? B MSE 77 B THR 78 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale7 covale both ? B ASP 57 C ? ? ? 1_555 B MSE 58 N ? ? B ASP 83 B MSE 84 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? B MSE 58 C ? ? ? 1_555 B ALA 59 N ? ? B MSE 84 B ALA 85 1_555 ? ? ? ? ? ? ? 1.334 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 96 A . ? THR 122 A PRO 97 A ? PRO 123 A 1 3.66 2 THR 96 B . ? THR 122 B PRO 97 B ? PRO 123 B 1 0.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 4 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 10 ? ASP A 11 ? LYS A 36 ASP A 37 A 2 ILE A 31 ? ASP A 36 ? ILE A 57 ASP A 62 A 3 LEU A 39 ? ASN A 44 ? LEU A 65 ASN A 70 A 4 TYR A 76 ? SER A 80 ? TYR A 102 SER A 106 B 1 ASP A 15 ? ARG A 17 ? ASP A 41 ARG A 43 B 2 HIS A 100 ? LYS A 107 ? HIS A 126 LYS A 133 B 3 GLU A 87 ? THR A 96 ? GLU A 113 THR A 122 B 4 ASP A 50 ? ASP A 57 ? ASP A 76 ASP A 83 B 5 VAL A 63 ? ILE A 69 ? VAL A 89 ILE A 95 C 1 LYS B 10 ? VAL B 12 ? LYS B 36 VAL B 38 C 2 ILE B 31 ? ASP B 36 ? ILE B 57 ASP B 62 C 3 LEU B 39 ? ASN B 44 ? LEU B 65 ASN B 70 C 4 TYR B 76 ? SER B 80 ? TYR B 102 SER B 106 D 1 ASP B 15 ? ARG B 17 ? ASP B 41 ARG B 43 D 2 HIS B 100 ? LYS B 107 ? HIS B 126 LYS B 133 D 3 GLU B 87 ? THR B 96 ? GLU B 113 THR B 122 D 4 ASP B 50 ? ASP B 57 ? ASP B 76 ASP B 83 D 5 VAL B 63 ? ILE B 69 ? VAL B 89 ILE B 95 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 10 ? N LYS A 36 O THR A 35 ? O THR A 61 A 2 3 N PHE A 34 ? N PHE A 60 O THR A 41 ? O THR A 67 A 3 4 N LEU A 40 ? N LEU A 66 O ILE A 79 ? O ILE A 105 B 1 2 N ARG A 17 ? N ARG A 43 O HIS A 100 ? O HIS A 126 B 2 3 O GLY A 103 ? O GLY A 129 N LEU A 91 ? N LEU A 117 B 3 4 O LYS A 90 ? O LYS A 116 N THR A 56 ? N THR A 82 B 4 5 N MSE A 51 ? N MSE A 77 O ILE A 69 ? O ILE A 95 C 1 2 N VAL B 12 ? N VAL B 38 O VAL B 33 ? O VAL B 59 C 2 3 N PHE B 34 ? N PHE B 60 O THR B 41 ? O THR B 67 C 3 4 N LEU B 40 ? N LEU B 66 O ILE B 79 ? O ILE B 105 D 1 2 N ARG B 17 ? N ARG B 43 O HIS B 100 ? O HIS B 126 D 2 3 O PHE B 105 ? O PHE B 131 N TYR B 89 ? N TYR B 115 D 3 4 O LYS B 90 ? O LYS B 116 N THR B 56 ? N THR B 82 D 4 5 N ILE B 55 ? N ILE B 81 O TYR B 65 ? O TYR B 91 # _atom_sites.entry_id 3D33 _atom_sites.fract_transf_matrix[1][1] 0.022441 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001690 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018123 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021284 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 27 ? ? ? A . n A 1 2 ALA 2 28 ? ? ? A . n A 1 3 ASN 3 29 ? ? ? A . n A 1 4 THR 4 30 ? ? ? A . n A 1 5 THR 5 31 ? ? ? A . n A 1 6 GLU 6 32 ? ? ? A . n A 1 7 THR 7 33 ? ? ? A . n A 1 8 PRO 8 34 34 PRO PRO A . n A 1 9 VAL 9 35 35 VAL VAL A . n A 1 10 LYS 10 36 36 LYS LYS A . n A 1 11 ASP 11 37 37 ASP ASP A . n A 1 12 VAL 12 38 38 VAL VAL A . n A 1 13 GLU 13 39 39 GLU GLU A . n A 1 14 LEU 14 40 40 LEU LEU A . n A 1 15 ASP 15 41 41 ASP ASP A . n A 1 16 GLY 16 42 42 GLY GLY A . n A 1 17 ARG 17 43 43 ARG ARG A . n A 1 18 TRP 18 44 44 TRP TRP A . n A 1 19 ASP 19 45 45 ASP ASP A . n A 1 20 ASP 20 46 46 ASP ASP A . n A 1 21 PRO 21 47 ? ? ? A . n A 1 22 ILE 22 48 ? ? ? A . n A 1 23 ARG 23 49 ? ? ? A . n A 1 24 SER 24 50 ? ? ? A . n A 1 25 ALA 25 51 ? ? ? A . n A 1 26 ALA 26 52 ? ? ? A . n A 1 27 THR 27 53 ? ? ? A . n A 1 28 ASN 28 54 54 ASN ASN A . n A 1 29 CYS 29 55 55 CYS CYS A . n A 1 30 PRO 30 56 56 PRO PRO A . n A 1 31 ILE 31 57 57 ILE ILE A . n A 1 32 THR 32 58 58 THR THR A . n A 1 33 VAL 33 59 59 VAL VAL A . n A 1 34 PHE 34 60 60 PHE PHE A . n A 1 35 THR 35 61 61 THR THR A . n A 1 36 ASP 36 62 62 ASP ASP A . n A 1 37 GLY 37 63 63 GLY GLY A . n A 1 38 TYR 38 64 64 TYR TYR A . n A 1 39 LEU 39 65 65 LEU LEU A . n A 1 40 LEU 40 66 66 LEU LEU A . n A 1 41 THR 41 67 67 THR THR A . n A 1 42 LEU 42 68 68 LEU LEU A . n A 1 43 LYS 43 69 69 LYS LYS A . n A 1 44 ASN 44 70 70 ASN ASN A . n A 1 45 ALA 45 71 71 ALA ALA A . n A 1 46 SER 46 72 72 SER SER A . n A 1 47 PRO 47 73 73 PRO PRO A . n A 1 48 ASP 48 74 74 ASP ASP A . n A 1 49 ARG 49 75 75 ARG ARG A . n A 1 50 ASP 50 76 76 ASP ASP A . n A 1 51 MSE 51 77 77 MSE MSE A . n A 1 52 THR 52 78 78 THR THR A . n A 1 53 ILE 53 79 79 ILE ILE A . n A 1 54 ARG 54 80 80 ARG ARG A . n A 1 55 ILE 55 81 81 ILE ILE A . n A 1 56 THR 56 82 82 THR THR A . n A 1 57 ASP 57 83 83 ASP ASP A . n A 1 58 MSE 58 84 84 MSE MSE A . n A 1 59 ALA 59 85 85 ALA ALA A . n A 1 60 LYS 60 86 86 LYS LYS A . n A 1 61 GLY 61 87 87 GLY GLY A . n A 1 62 GLY 62 88 88 GLY GLY A . n A 1 63 VAL 63 89 89 VAL VAL A . n A 1 64 VAL 64 90 90 VAL VAL A . n A 1 65 TYR 65 91 91 TYR TYR A . n A 1 66 GLU 66 92 92 GLU GLU A . n A 1 67 ASN 67 93 93 ASN ASN A . n A 1 68 ASP 68 94 94 ASP ASP A . n A 1 69 ILE 69 95 95 ILE ILE A . n A 1 70 PRO 70 96 96 PRO PRO A . n A 1 71 GLU 71 97 97 GLU GLU A . n A 1 72 VAL 72 98 98 VAL VAL A . n A 1 73 GLN 73 99 99 GLN GLN A . n A 1 74 SER 74 100 100 SER SER A . n A 1 75 ALA 75 101 101 ALA ALA A . n A 1 76 TYR 76 102 102 TYR TYR A . n A 1 77 ILE 77 103 103 ILE ILE A . n A 1 78 THR 78 104 104 THR THR A . n A 1 79 ILE 79 105 105 ILE ILE A . n A 1 80 SER 80 106 106 SER SER A . n A 1 81 ILE 81 107 107 ILE ILE A . n A 1 82 ALA 82 108 108 ALA ALA A . n A 1 83 ASN 83 109 109 ASN ASN A . n A 1 84 PHE 84 110 110 PHE PHE A . n A 1 85 PRO 85 111 111 PRO PRO A . n A 1 86 ALA 86 112 112 ALA ALA A . n A 1 87 GLU 87 113 113 GLU GLU A . n A 1 88 GLU 88 114 114 GLU GLU A . n A 1 89 TYR 89 115 115 TYR TYR A . n A 1 90 LYS 90 116 116 LYS LYS A . n A 1 91 LEU 91 117 117 LEU LEU A . n A 1 92 GLU 92 118 118 GLU GLU A . n A 1 93 ILE 93 119 119 ILE ILE A . n A 1 94 THR 94 120 120 THR THR A . n A 1 95 GLY 95 121 121 GLY GLY A . n A 1 96 THR 96 122 122 THR THR A . n A 1 97 PRO 97 123 123 PRO PRO A . n A 1 98 SER 98 124 124 SER SER A . n A 1 99 GLY 99 125 125 GLY GLY A . n A 1 100 HIS 100 126 126 HIS HIS A . n A 1 101 LEU 101 127 127 LEU LEU A . n A 1 102 THR 102 128 128 THR THR A . n A 1 103 GLY 103 129 129 GLY GLY A . n A 1 104 TYR 104 130 130 TYR TYR A . n A 1 105 PHE 105 131 131 PHE PHE A . n A 1 106 THR 106 132 132 THR THR A . n A 1 107 LYS 107 133 133 LYS LYS A . n A 1 108 GLU 108 134 134 GLU GLU A . n B 1 1 GLY 1 27 ? ? ? B . n B 1 2 ALA 2 28 ? ? ? B . n B 1 3 ASN 3 29 ? ? ? B . n B 1 4 THR 4 30 ? ? ? B . n B 1 5 THR 5 31 ? ? ? B . n B 1 6 GLU 6 32 ? ? ? B . n B 1 7 THR 7 33 ? ? ? B . n B 1 8 PRO 8 34 34 PRO PRO B . n B 1 9 VAL 9 35 35 VAL VAL B . n B 1 10 LYS 10 36 36 LYS LYS B . n B 1 11 ASP 11 37 37 ASP ASP B . n B 1 12 VAL 12 38 38 VAL VAL B . n B 1 13 GLU 13 39 39 GLU GLU B . n B 1 14 LEU 14 40 40 LEU LEU B . n B 1 15 ASP 15 41 41 ASP ASP B . n B 1 16 GLY 16 42 42 GLY GLY B . n B 1 17 ARG 17 43 43 ARG ARG B . n B 1 18 TRP 18 44 44 TRP TRP B . n B 1 19 ASP 19 45 45 ASP ASP B . n B 1 20 ASP 20 46 ? ? ? B . n B 1 21 PRO 21 47 ? ? ? B . n B 1 22 ILE 22 48 ? ? ? B . n B 1 23 ARG 23 49 ? ? ? B . n B 1 24 SER 24 50 ? ? ? B . n B 1 25 ALA 25 51 ? ? ? B . n B 1 26 ALA 26 52 ? ? ? B . n B 1 27 THR 27 53 ? ? ? B . n B 1 28 ASN 28 54 54 ASN ASN B . n B 1 29 CYS 29 55 55 CYS CYS B . n B 1 30 PRO 30 56 56 PRO PRO B . n B 1 31 ILE 31 57 57 ILE ILE B . n B 1 32 THR 32 58 58 THR THR B . n B 1 33 VAL 33 59 59 VAL VAL B . n B 1 34 PHE 34 60 60 PHE PHE B . n B 1 35 THR 35 61 61 THR THR B . n B 1 36 ASP 36 62 62 ASP ASP B . n B 1 37 GLY 37 63 63 GLY GLY B . n B 1 38 TYR 38 64 64 TYR TYR B . n B 1 39 LEU 39 65 65 LEU LEU B . n B 1 40 LEU 40 66 66 LEU LEU B . n B 1 41 THR 41 67 67 THR THR B . n B 1 42 LEU 42 68 68 LEU LEU B . n B 1 43 LYS 43 69 69 LYS LYS B . n B 1 44 ASN 44 70 70 ASN ASN B . n B 1 45 ALA 45 71 71 ALA ALA B . n B 1 46 SER 46 72 72 SER SER B . n B 1 47 PRO 47 73 73 PRO PRO B . n B 1 48 ASP 48 74 74 ASP ASP B . n B 1 49 ARG 49 75 75 ARG ARG B . n B 1 50 ASP 50 76 76 ASP ASP B . n B 1 51 MSE 51 77 77 MSE MSE B . n B 1 52 THR 52 78 78 THR THR B . n B 1 53 ILE 53 79 79 ILE ILE B . n B 1 54 ARG 54 80 80 ARG ARG B . n B 1 55 ILE 55 81 81 ILE ILE B . n B 1 56 THR 56 82 82 THR THR B . n B 1 57 ASP 57 83 83 ASP ASP B . n B 1 58 MSE 58 84 84 MSE MSE B . n B 1 59 ALA 59 85 85 ALA ALA B . n B 1 60 LYS 60 86 86 LYS LYS B . n B 1 61 GLY 61 87 87 GLY GLY B . n B 1 62 GLY 62 88 88 GLY GLY B . n B 1 63 VAL 63 89 89 VAL VAL B . n B 1 64 VAL 64 90 90 VAL VAL B . n B 1 65 TYR 65 91 91 TYR TYR B . n B 1 66 GLU 66 92 92 GLU GLU B . n B 1 67 ASN 67 93 93 ASN ASN B . n B 1 68 ASP 68 94 94 ASP ASP B . n B 1 69 ILE 69 95 95 ILE ILE B . n B 1 70 PRO 70 96 96 PRO PRO B . n B 1 71 GLU 71 97 97 GLU GLU B . n B 1 72 VAL 72 98 98 VAL VAL B . n B 1 73 GLN 73 99 99 GLN GLN B . n B 1 74 SER 74 100 100 SER SER B . n B 1 75 ALA 75 101 101 ALA ALA B . n B 1 76 TYR 76 102 102 TYR TYR B . n B 1 77 ILE 77 103 103 ILE ILE B . n B 1 78 THR 78 104 104 THR THR B . n B 1 79 ILE 79 105 105 ILE ILE B . n B 1 80 SER 80 106 106 SER SER B . n B 1 81 ILE 81 107 107 ILE ILE B . n B 1 82 ALA 82 108 108 ALA ALA B . n B 1 83 ASN 83 109 109 ASN ASN B . n B 1 84 PHE 84 110 110 PHE PHE B . n B 1 85 PRO 85 111 111 PRO PRO B . n B 1 86 ALA 86 112 112 ALA ALA B . n B 1 87 GLU 87 113 113 GLU GLU B . n B 1 88 GLU 88 114 114 GLU GLU B . n B 1 89 TYR 89 115 115 TYR TYR B . n B 1 90 LYS 90 116 116 LYS LYS B . n B 1 91 LEU 91 117 117 LEU LEU B . n B 1 92 GLU 92 118 118 GLU GLU B . n B 1 93 ILE 93 119 119 ILE ILE B . n B 1 94 THR 94 120 120 THR THR B . n B 1 95 GLY 95 121 121 GLY GLY B . n B 1 96 THR 96 122 122 THR THR B . n B 1 97 PRO 97 123 123 PRO PRO B . n B 1 98 SER 98 124 124 SER SER B . n B 1 99 GLY 99 125 125 GLY GLY B . n B 1 100 HIS 100 126 126 HIS HIS B . n B 1 101 LEU 101 127 127 LEU LEU B . n B 1 102 THR 102 128 128 THR THR B . n B 1 103 GLY 103 129 129 GLY GLY B . n B 1 104 TYR 104 130 130 TYR TYR B . n B 1 105 PHE 105 131 131 PHE PHE B . n B 1 106 THR 106 132 132 THR THR B . n B 1 107 LYS 107 133 133 LYS LYS B . n B 1 108 GLU 108 134 134 GLU GLU B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 135 1 HOH HOH A . C 2 HOH 2 136 3 HOH HOH A . C 2 HOH 3 137 5 HOH HOH A . C 2 HOH 4 138 13 HOH HOH A . C 2 HOH 5 139 17 HOH HOH A . C 2 HOH 6 140 18 HOH HOH A . C 2 HOH 7 141 21 HOH HOH A . C 2 HOH 8 142 23 HOH HOH A . C 2 HOH 9 143 24 HOH HOH A . C 2 HOH 10 144 25 HOH HOH A . C 2 HOH 11 145 26 HOH HOH A . C 2 HOH 12 146 28 HOH HOH A . C 2 HOH 13 147 30 HOH HOH A . C 2 HOH 14 148 32 HOH HOH A . C 2 HOH 15 149 33 HOH HOH A . C 2 HOH 16 150 35 HOH HOH A . C 2 HOH 17 151 36 HOH HOH A . C 2 HOH 18 152 41 HOH HOH A . C 2 HOH 19 153 46 HOH HOH A . C 2 HOH 20 154 47 HOH HOH A . C 2 HOH 21 155 48 HOH HOH A . C 2 HOH 22 156 49 HOH HOH A . C 2 HOH 23 157 53 HOH HOH A . C 2 HOH 24 158 54 HOH HOH A . C 2 HOH 25 159 55 HOH HOH A . C 2 HOH 26 160 56 HOH HOH A . C 2 HOH 27 161 60 HOH HOH A . C 2 HOH 28 162 61 HOH HOH A . C 2 HOH 29 163 62 HOH HOH A . C 2 HOH 30 164 63 HOH HOH A . C 2 HOH 31 165 64 HOH HOH A . C 2 HOH 32 166 65 HOH HOH A . C 2 HOH 33 167 66 HOH HOH A . C 2 HOH 34 168 67 HOH HOH A . C 2 HOH 35 169 68 HOH HOH A . C 2 HOH 36 170 69 HOH HOH A . C 2 HOH 37 171 75 HOH HOH A . C 2 HOH 38 172 76 HOH HOH A . C 2 HOH 39 173 82 HOH HOH A . C 2 HOH 40 174 84 HOH HOH A . C 2 HOH 41 175 88 HOH HOH A . C 2 HOH 42 176 89 HOH HOH A . C 2 HOH 43 177 90 HOH HOH A . C 2 HOH 44 178 93 HOH HOH A . C 2 HOH 45 179 95 HOH HOH A . C 2 HOH 46 180 97 HOH HOH A . C 2 HOH 47 181 101 HOH HOH A . C 2 HOH 48 182 102 HOH HOH A . C 2 HOH 49 183 103 HOH HOH A . C 2 HOH 50 184 104 HOH HOH A . C 2 HOH 51 185 106 HOH HOH A . C 2 HOH 52 186 109 HOH HOH A . C 2 HOH 53 187 110 HOH HOH A . C 2 HOH 54 188 111 HOH HOH A . C 2 HOH 55 189 116 HOH HOH A . C 2 HOH 56 190 117 HOH HOH A . C 2 HOH 57 191 118 HOH HOH A . C 2 HOH 58 192 119 HOH HOH A . C 2 HOH 59 193 121 HOH HOH A . C 2 HOH 60 194 122 HOH HOH A . C 2 HOH 61 195 124 HOH HOH A . C 2 HOH 62 196 126 HOH HOH A . C 2 HOH 63 197 127 HOH HOH A . C 2 HOH 64 198 128 HOH HOH A . C 2 HOH 65 199 129 HOH HOH A . C 2 HOH 66 200 132 HOH HOH A . C 2 HOH 67 201 133 HOH HOH A . C 2 HOH 68 202 135 HOH HOH A . C 2 HOH 69 203 136 HOH HOH A . C 2 HOH 70 204 146 HOH HOH A . C 2 HOH 71 205 150 HOH HOH A . C 2 HOH 72 206 151 HOH HOH A . C 2 HOH 73 207 153 HOH HOH A . C 2 HOH 74 208 155 HOH HOH A . C 2 HOH 75 209 158 HOH HOH A . C 2 HOH 76 210 159 HOH HOH A . C 2 HOH 77 211 163 HOH HOH A . C 2 HOH 78 212 164 HOH HOH A . C 2 HOH 79 213 166 HOH HOH A . C 2 HOH 80 214 167 HOH HOH A . C 2 HOH 81 215 170 HOH HOH A . C 2 HOH 82 216 172 HOH HOH A . C 2 HOH 83 217 176 HOH HOH A . C 2 HOH 84 218 179 HOH HOH A . C 2 HOH 85 219 181 HOH HOH A . C 2 HOH 86 220 183 HOH HOH A . C 2 HOH 87 221 187 HOH HOH A . C 2 HOH 88 222 188 HOH HOH A . C 2 HOH 89 223 190 HOH HOH A . C 2 HOH 90 224 191 HOH HOH A . C 2 HOH 91 225 194 HOH HOH A . C 2 HOH 92 226 196 HOH HOH A . C 2 HOH 93 227 198 HOH HOH A . C 2 HOH 94 228 204 HOH HOH A . C 2 HOH 95 229 205 HOH HOH A . C 2 HOH 96 230 209 HOH HOH A . C 2 HOH 97 231 212 HOH HOH A . C 2 HOH 98 232 215 HOH HOH A . C 2 HOH 99 233 216 HOH HOH A . C 2 HOH 100 234 224 HOH HOH A . C 2 HOH 101 235 225 HOH HOH A . C 2 HOH 102 236 226 HOH HOH A . C 2 HOH 103 237 227 HOH HOH A . C 2 HOH 104 238 228 HOH HOH A . C 2 HOH 105 239 229 HOH HOH A . C 2 HOH 106 240 230 HOH HOH A . C 2 HOH 107 241 231 HOH HOH A . C 2 HOH 108 242 237 HOH HOH A . C 2 HOH 109 243 238 HOH HOH A . C 2 HOH 110 244 240 HOH HOH A . C 2 HOH 111 245 241 HOH HOH A . C 2 HOH 112 246 242 HOH HOH A . C 2 HOH 113 247 244 HOH HOH A . C 2 HOH 114 248 246 HOH HOH A . C 2 HOH 115 249 247 HOH HOH A . C 2 HOH 116 250 248 HOH HOH A . C 2 HOH 117 251 255 HOH HOH A . C 2 HOH 118 252 261 HOH HOH A . C 2 HOH 119 253 262 HOH HOH A . C 2 HOH 120 254 264 HOH HOH A . C 2 HOH 121 255 265 HOH HOH A . C 2 HOH 122 256 267 HOH HOH A . C 2 HOH 123 257 269 HOH HOH A . C 2 HOH 124 258 270 HOH HOH A . C 2 HOH 125 259 272 HOH HOH A . C 2 HOH 126 260 273 HOH HOH A . C 2 HOH 127 261 274 HOH HOH A . C 2 HOH 128 262 276 HOH HOH A . C 2 HOH 129 263 280 HOH HOH A . C 2 HOH 130 264 281 HOH HOH A . D 2 HOH 1 135 2 HOH HOH B . D 2 HOH 2 136 4 HOH HOH B . D 2 HOH 3 137 6 HOH HOH B . D 2 HOH 4 138 7 HOH HOH B . D 2 HOH 5 139 8 HOH HOH B . D 2 HOH 6 140 9 HOH HOH B . D 2 HOH 7 141 10 HOH HOH B . D 2 HOH 8 142 11 HOH HOH B . D 2 HOH 9 143 12 HOH HOH B . D 2 HOH 10 144 14 HOH HOH B . D 2 HOH 11 145 15 HOH HOH B . D 2 HOH 12 146 16 HOH HOH B . D 2 HOH 13 147 19 HOH HOH B . D 2 HOH 14 148 20 HOH HOH B . D 2 HOH 15 149 22 HOH HOH B . D 2 HOH 16 150 27 HOH HOH B . D 2 HOH 17 151 29 HOH HOH B . D 2 HOH 18 152 31 HOH HOH B . D 2 HOH 19 153 34 HOH HOH B . D 2 HOH 20 154 37 HOH HOH B . D 2 HOH 21 155 38 HOH HOH B . D 2 HOH 22 156 39 HOH HOH B . D 2 HOH 23 157 40 HOH HOH B . D 2 HOH 24 158 42 HOH HOH B . D 2 HOH 25 159 43 HOH HOH B . D 2 HOH 26 160 44 HOH HOH B . D 2 HOH 27 161 45 HOH HOH B . D 2 HOH 28 162 50 HOH HOH B . D 2 HOH 29 163 51 HOH HOH B . D 2 HOH 30 164 52 HOH HOH B . D 2 HOH 31 165 57 HOH HOH B . D 2 HOH 32 166 58 HOH HOH B . D 2 HOH 33 167 59 HOH HOH B . D 2 HOH 34 168 70 HOH HOH B . D 2 HOH 35 169 71 HOH HOH B . D 2 HOH 36 170 72 HOH HOH B . D 2 HOH 37 171 73 HOH HOH B . D 2 HOH 38 172 74 HOH HOH B . D 2 HOH 39 173 77 HOH HOH B . D 2 HOH 40 174 78 HOH HOH B . D 2 HOH 41 175 79 HOH HOH B . D 2 HOH 42 176 80 HOH HOH B . D 2 HOH 43 177 81 HOH HOH B . D 2 HOH 44 178 83 HOH HOH B . D 2 HOH 45 179 85 HOH HOH B . D 2 HOH 46 180 86 HOH HOH B . D 2 HOH 47 181 87 HOH HOH B . D 2 HOH 48 182 91 HOH HOH B . D 2 HOH 49 183 92 HOH HOH B . D 2 HOH 50 184 94 HOH HOH B . D 2 HOH 51 185 96 HOH HOH B . D 2 HOH 52 186 98 HOH HOH B . D 2 HOH 53 187 99 HOH HOH B . D 2 HOH 54 188 100 HOH HOH B . D 2 HOH 55 189 105 HOH HOH B . D 2 HOH 56 190 107 HOH HOH B . D 2 HOH 57 191 108 HOH HOH B . D 2 HOH 58 192 112 HOH HOH B . D 2 HOH 59 193 113 HOH HOH B . D 2 HOH 60 194 114 HOH HOH B . D 2 HOH 61 195 115 HOH HOH B . D 2 HOH 62 196 120 HOH HOH B . D 2 HOH 63 197 123 HOH HOH B . D 2 HOH 64 198 125 HOH HOH B . D 2 HOH 65 199 130 HOH HOH B . D 2 HOH 66 200 131 HOH HOH B . D 2 HOH 67 201 134 HOH HOH B . D 2 HOH 68 202 137 HOH HOH B . D 2 HOH 69 203 138 HOH HOH B . D 2 HOH 70 204 139 HOH HOH B . D 2 HOH 71 205 140 HOH HOH B . D 2 HOH 72 206 141 HOH HOH B . D 2 HOH 73 207 142 HOH HOH B . D 2 HOH 74 208 143 HOH HOH B . D 2 HOH 75 209 144 HOH HOH B . D 2 HOH 76 210 145 HOH HOH B . D 2 HOH 77 211 147 HOH HOH B . D 2 HOH 78 212 148 HOH HOH B . D 2 HOH 79 213 149 HOH HOH B . D 2 HOH 80 214 152 HOH HOH B . D 2 HOH 81 215 154 HOH HOH B . D 2 HOH 82 216 156 HOH HOH B . D 2 HOH 83 217 157 HOH HOH B . D 2 HOH 84 218 160 HOH HOH B . D 2 HOH 85 219 161 HOH HOH B . D 2 HOH 86 220 162 HOH HOH B . D 2 HOH 87 221 165 HOH HOH B . D 2 HOH 88 222 168 HOH HOH B . D 2 HOH 89 223 169 HOH HOH B . D 2 HOH 90 224 171 HOH HOH B . D 2 HOH 91 225 173 HOH HOH B . D 2 HOH 92 226 174 HOH HOH B . D 2 HOH 93 227 175 HOH HOH B . D 2 HOH 94 228 177 HOH HOH B . D 2 HOH 95 229 178 HOH HOH B . D 2 HOH 96 230 180 HOH HOH B . D 2 HOH 97 231 182 HOH HOH B . D 2 HOH 98 232 184 HOH HOH B . D 2 HOH 99 233 185 HOH HOH B . D 2 HOH 100 234 186 HOH HOH B . D 2 HOH 101 235 189 HOH HOH B . D 2 HOH 102 236 192 HOH HOH B . D 2 HOH 103 237 193 HOH HOH B . D 2 HOH 104 238 195 HOH HOH B . D 2 HOH 105 239 197 HOH HOH B . D 2 HOH 106 240 199 HOH HOH B . D 2 HOH 107 241 200 HOH HOH B . D 2 HOH 108 242 201 HOH HOH B . D 2 HOH 109 243 202 HOH HOH B . D 2 HOH 110 244 203 HOH HOH B . D 2 HOH 111 245 206 HOH HOH B . D 2 HOH 112 246 207 HOH HOH B . D 2 HOH 113 247 208 HOH HOH B . D 2 HOH 114 248 210 HOH HOH B . D 2 HOH 115 249 211 HOH HOH B . D 2 HOH 116 250 213 HOH HOH B . D 2 HOH 117 251 214 HOH HOH B . D 2 HOH 118 252 217 HOH HOH B . D 2 HOH 119 253 218 HOH HOH B . D 2 HOH 120 254 219 HOH HOH B . D 2 HOH 121 255 220 HOH HOH B . D 2 HOH 122 256 221 HOH HOH B . D 2 HOH 123 257 222 HOH HOH B . D 2 HOH 124 258 223 HOH HOH B . D 2 HOH 125 259 232 HOH HOH B . D 2 HOH 126 260 233 HOH HOH B . D 2 HOH 127 261 234 HOH HOH B . D 2 HOH 128 262 235 HOH HOH B . D 2 HOH 129 263 236 HOH HOH B . D 2 HOH 130 264 239 HOH HOH B . D 2 HOH 131 265 243 HOH HOH B . D 2 HOH 132 266 245 HOH HOH B . D 2 HOH 133 267 249 HOH HOH B . D 2 HOH 134 268 250 HOH HOH B . D 2 HOH 135 269 251 HOH HOH B . D 2 HOH 136 270 252 HOH HOH B . D 2 HOH 137 271 253 HOH HOH B . D 2 HOH 138 272 254 HOH HOH B . D 2 HOH 139 273 256 HOH HOH B . D 2 HOH 140 274 257 HOH HOH B . D 2 HOH 141 275 258 HOH HOH B . D 2 HOH 142 276 259 HOH HOH B . D 2 HOH 143 277 260 HOH HOH B . D 2 HOH 144 278 263 HOH HOH B . D 2 HOH 145 279 266 HOH HOH B . D 2 HOH 146 280 268 HOH HOH B . D 2 HOH 147 281 271 HOH HOH B . D 2 HOH 148 282 275 HOH HOH B . D 2 HOH 149 283 277 HOH HOH B . D 2 HOH 150 284 278 HOH HOH B . D 2 HOH 151 285 279 HOH HOH B . D 2 HOH 152 286 282 HOH HOH B . D 2 HOH 153 287 283 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 51 A MSE 77 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 84 ? MET SELENOMETHIONINE 3 B MSE 51 B MSE 77 ? MET SELENOMETHIONINE 4 B MSE 58 B MSE 84 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 9.2825 11.7246 10.8684 -0.0637 -0.0470 -0.0435 0.0074 -0.0065 -0.0074 1.1627 1.7736 2.3912 0.3124 0.0569 0.0921 0.0150 -0.0250 0.0100 -0.0750 0.0047 0.0761 0.0108 -0.0036 0.0341 'X-RAY DIFFRACTION' 2 ? refined 10.6125 22.0998 -9.3901 -0.0578 -0.0388 -0.0292 -0.0095 0.0037 -0.0125 1.2694 1.6648 1.9261 -0.6028 -0.4287 -0.1177 -0.0035 -0.0244 0.0278 0.0804 0.0129 0.0670 -0.0030 0.0434 0.0573 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 8 A 108 ? A 34 A 134 'X-RAY DIFFRACTION' ? 2 2 B 8 B 108 ? B 34 B 134 'X-RAY DIFFRACTION' ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3D33 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 28-134 OF THE FULL LENGTH PROTEIN. THIS REMOVED THE PUTATIVE SIGNAL PEPTIDE WHOSE PREDICTED CLEAVAGE SITE IS BETWEEN RESIDUES 28-29. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 74 ? ? -159.09 5.85 2 1 ASP B 74 ? ? -153.23 6.03 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 36 ? CD ? A LYS 10 CD 2 1 Y 1 A LYS 36 ? CE ? A LYS 10 CE 3 1 Y 1 A LYS 36 ? NZ ? A LYS 10 NZ 4 1 Y 1 A ASN 54 ? CG ? A ASN 28 CG 5 1 Y 1 A ASN 54 ? OD1 ? A ASN 28 OD1 6 1 Y 1 A ASN 54 ? ND2 ? A ASN 28 ND2 7 1 Y 1 A GLU 134 ? CG ? A GLU 108 CG 8 1 Y 1 A GLU 134 ? CD ? A GLU 108 CD 9 1 Y 1 A GLU 134 ? OE1 ? A GLU 108 OE1 10 1 Y 1 A GLU 134 ? OE2 ? A GLU 108 OE2 11 1 Y 1 B LYS 36 ? CG ? B LYS 10 CG 12 1 Y 1 B LYS 36 ? CD ? B LYS 10 CD 13 1 Y 1 B LYS 36 ? CE ? B LYS 10 CE 14 1 Y 1 B LYS 36 ? NZ ? B LYS 10 NZ 15 1 Y 1 B GLU 39 ? CD ? B GLU 13 CD 16 1 Y 1 B GLU 39 ? OE1 ? B GLU 13 OE1 17 1 Y 1 B GLU 39 ? OE2 ? B GLU 13 OE2 18 1 Y 1 B ASN 54 ? CG ? B ASN 28 CG 19 1 Y 1 B ASN 54 ? OD1 ? B ASN 28 OD1 20 1 Y 1 B ASN 54 ? ND2 ? B ASN 28 ND2 21 1 Y 1 B TYR 64 ? CG ? B TYR 38 CG 22 1 Y 1 B TYR 64 ? CD1 ? B TYR 38 CD1 23 1 Y 1 B TYR 64 ? CD2 ? B TYR 38 CD2 24 1 Y 1 B TYR 64 ? CE1 ? B TYR 38 CE1 25 1 Y 1 B TYR 64 ? CE2 ? B TYR 38 CE2 26 1 Y 1 B TYR 64 ? CZ ? B TYR 38 CZ 27 1 Y 1 B TYR 64 ? OH ? B TYR 38 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 27 ? A GLY 1 2 1 Y 1 A ALA 28 ? A ALA 2 3 1 Y 1 A ASN 29 ? A ASN 3 4 1 Y 1 A THR 30 ? A THR 4 5 1 Y 1 A THR 31 ? A THR 5 6 1 Y 1 A GLU 32 ? A GLU 6 7 1 Y 1 A THR 33 ? A THR 7 8 1 Y 1 A PRO 47 ? A PRO 21 9 1 Y 1 A ILE 48 ? A ILE 22 10 1 Y 1 A ARG 49 ? A ARG 23 11 1 Y 1 A SER 50 ? A SER 24 12 1 Y 1 A ALA 51 ? A ALA 25 13 1 Y 1 A ALA 52 ? A ALA 26 14 1 Y 1 A THR 53 ? A THR 27 15 1 Y 1 B GLY 27 ? B GLY 1 16 1 Y 1 B ALA 28 ? B ALA 2 17 1 Y 1 B ASN 29 ? B ASN 3 18 1 Y 1 B THR 30 ? B THR 4 19 1 Y 1 B THR 31 ? B THR 5 20 1 Y 1 B GLU 32 ? B GLU 6 21 1 Y 1 B THR 33 ? B THR 7 22 1 Y 1 B ASP 46 ? B ASP 20 23 1 Y 1 B PRO 47 ? B PRO 21 24 1 Y 1 B ILE 48 ? B ILE 22 25 1 Y 1 B ARG 49 ? B ARG 23 26 1 Y 1 B SER 50 ? B SER 24 27 1 Y 1 B ALA 51 ? B ALA 25 28 1 Y 1 B ALA 52 ? B ALA 26 29 1 Y 1 B THR 53 ? B THR 27 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 2 'gel filtration' ? #