data_3D3J # _entry.id 3D3J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3D3J pdb_00003d3j 10.2210/pdb3d3j/pdb RCSB RCSB047546 ? ? WWPDB D_1000047546 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3D3K _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3D3J _pdbx_database_status.recvd_initial_deposition_date 2008-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Ling, S.H.M.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of human Edc3 and its functional implications' _citation.journal_abbrev Mol.Cell.Biol. _citation.journal_volume 28 _citation.page_first 5965 _citation.page_last 5976 _citation.year 2008 _citation.journal_id_ASTM MCEBD4 _citation.country US _citation.journal_id_ISSN 0270-7306 _citation.journal_id_CSD 2044 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18678652 _citation.pdbx_database_id_DOI 10.1128/MCB.00761-08 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ling, S.H.M.' 1 ? primary 'Decker, C.J.' 2 ? primary 'Walsh, M.A.' 3 ? primary 'She, M.' 4 ? primary 'Parker, R.' 5 ? primary 'Song, H.' 6 ? # _cell.entry_id 3D3J _cell.length_a 119.741 _cell.length_b 119.741 _cell.length_c 93.923 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D3J _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Enhancer of mRNA-decapping protein 3' 34170.098 1 ? ? 'C-terminal Residues, UNP 203-508' ? 2 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'YjeF domain-containing protein 1, LSM16 homolog' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSI SYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDV QVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSI DPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA ; _entity_poly.pdbx_seq_one_letter_code_can ;DFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSI SYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDV QVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSI DPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PHE n 1 3 ASP n 1 4 PHE n 1 5 GLU n 1 6 GLY n 1 7 ASN n 1 8 LEU n 1 9 ALA n 1 10 LEU n 1 11 PHE n 1 12 ASP n 1 13 LYS n 1 14 ALA n 1 15 ALA n 1 16 VAL n 1 17 PHE n 1 18 GLU n 1 19 GLU n 1 20 ILE n 1 21 ASP n 1 22 THR n 1 23 TYR n 1 24 GLU n 1 25 ARG n 1 26 ARG n 1 27 SER n 1 28 GLY n 1 29 THR n 1 30 ARG n 1 31 SER n 1 32 ARG n 1 33 GLY n 1 34 ILE n 1 35 PRO n 1 36 ASN n 1 37 GLU n 1 38 ARG n 1 39 PRO n 1 40 THR n 1 41 ARG n 1 42 TYR n 1 43 ARG n 1 44 HIS n 1 45 ASP n 1 46 GLU n 1 47 ASN n 1 48 ILE n 1 49 LEU n 1 50 GLU n 1 51 SER n 1 52 GLU n 1 53 PRO n 1 54 ILE n 1 55 VAL n 1 56 TYR n 1 57 ARG n 1 58 ARG n 1 59 ILE n 1 60 ILE n 1 61 VAL n 1 62 PRO n 1 63 HIS n 1 64 ASN n 1 65 VAL n 1 66 SER n 1 67 LYS n 1 68 GLU n 1 69 PHE n 1 70 CYS n 1 71 THR n 1 72 ASP n 1 73 SER n 1 74 GLY n 1 75 LEU n 1 76 VAL n 1 77 VAL n 1 78 PRO n 1 79 SER n 1 80 ILE n 1 81 SER n 1 82 TYR n 1 83 GLU n 1 84 LEU n 1 85 HIS n 1 86 LYS n 1 87 LYS n 1 88 LEU n 1 89 LEU n 1 90 SER n 1 91 VAL n 1 92 ALA n 1 93 GLU n 1 94 LYS n 1 95 HIS n 1 96 GLY n 1 97 LEU n 1 98 THR n 1 99 LEU n 1 100 GLU n 1 101 ARG n 1 102 ARG n 1 103 LEU n 1 104 GLU n 1 105 MET n 1 106 THR n 1 107 GLY n 1 108 VAL n 1 109 CYS n 1 110 ALA n 1 111 SER n 1 112 GLN n 1 113 MET n 1 114 ALA n 1 115 LEU n 1 116 THR n 1 117 LEU n 1 118 LEU n 1 119 GLY n 1 120 GLY n 1 121 PRO n 1 122 ASN n 1 123 ARG n 1 124 LEU n 1 125 ASN n 1 126 PRO n 1 127 LYS n 1 128 ASN n 1 129 VAL n 1 130 HIS n 1 131 GLN n 1 132 ARG n 1 133 PRO n 1 134 THR n 1 135 VAL n 1 136 ALA n 1 137 LEU n 1 138 LEU n 1 139 CYS n 1 140 GLY n 1 141 PRO n 1 142 HIS n 1 143 VAL n 1 144 LYS n 1 145 GLY n 1 146 ALA n 1 147 GLN n 1 148 GLY n 1 149 ILE n 1 150 SER n 1 151 CYS n 1 152 GLY n 1 153 ARG n 1 154 HIS n 1 155 LEU n 1 156 ALA n 1 157 ASN n 1 158 HIS n 1 159 ASP n 1 160 VAL n 1 161 GLN n 1 162 VAL n 1 163 ILE n 1 164 LEU n 1 165 PHE n 1 166 LEU n 1 167 PRO n 1 168 ASN n 1 169 PHE n 1 170 VAL n 1 171 LYS n 1 172 MET n 1 173 LEU n 1 174 GLU n 1 175 SER n 1 176 ILE n 1 177 THR n 1 178 ASN n 1 179 GLU n 1 180 LEU n 1 181 SER n 1 182 LEU n 1 183 PHE n 1 184 SER n 1 185 LYS n 1 186 THR n 1 187 GLN n 1 188 GLY n 1 189 GLN n 1 190 GLN n 1 191 VAL n 1 192 SER n 1 193 SER n 1 194 LEU n 1 195 LYS n 1 196 ASP n 1 197 LEU n 1 198 PRO n 1 199 THR n 1 200 SER n 1 201 PRO n 1 202 VAL n 1 203 ASP n 1 204 LEU n 1 205 VAL n 1 206 ILE n 1 207 ASN n 1 208 CYS n 1 209 LEU n 1 210 ASP n 1 211 CYS n 1 212 PRO n 1 213 GLU n 1 214 ASN n 1 215 VAL n 1 216 PHE n 1 217 LEU n 1 218 ARG n 1 219 ASP n 1 220 GLN n 1 221 PRO n 1 222 TRP n 1 223 TYR n 1 224 LYS n 1 225 ALA n 1 226 ALA n 1 227 VAL n 1 228 ALA n 1 229 TRP n 1 230 ALA n 1 231 ASN n 1 232 GLN n 1 233 ASN n 1 234 ARG n 1 235 ALA n 1 236 PRO n 1 237 VAL n 1 238 LEU n 1 239 SER n 1 240 ILE n 1 241 ASP n 1 242 PRO n 1 243 PRO n 1 244 VAL n 1 245 HIS n 1 246 GLU n 1 247 VAL n 1 248 GLU n 1 249 GLN n 1 250 GLY n 1 251 ILE n 1 252 ASP n 1 253 ALA n 1 254 LYS n 1 255 TRP n 1 256 SER n 1 257 LEU n 1 258 ALA n 1 259 LEU n 1 260 GLY n 1 261 LEU n 1 262 PRO n 1 263 LEU n 1 264 PRO n 1 265 LEU n 1 266 GLY n 1 267 GLU n 1 268 HIS n 1 269 ALA n 1 270 GLY n 1 271 ARG n 1 272 ILE n 1 273 TYR n 1 274 LEU n 1 275 CYS n 1 276 ASP n 1 277 ILE n 1 278 GLY n 1 279 ILE n 1 280 PRO n 1 281 GLN n 1 282 GLN n 1 283 VAL n 1 284 PHE n 1 285 GLN n 1 286 GLU n 1 287 VAL n 1 288 GLY n 1 289 ILE n 1 290 ASN n 1 291 TYR n 1 292 HIS n 1 293 SER n 1 294 PRO n 1 295 PHE n 1 296 GLY n 1 297 CYS n 1 298 LYS n 1 299 PHE n 1 300 VAL n 1 301 ILE n 1 302 PRO n 1 303 LEU n 1 304 HIS n 1 305 SER n 1 306 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EDC3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6p1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EDC3_HUMAN _struct_ref.pdbx_db_accession Q96F86 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSGLVVPSI SYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDV QVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSI DPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA ; _struct_ref.pdbx_align_begin 203 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3D3J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 306 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96F86 _struct_ref_seq.db_align_beg 203 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 508 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 203 _struct_ref_seq.pdbx_auth_seq_align_end 508 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3D3J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 6000, sodium cacodylate, magnesium acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-07-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3D3J _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low ? _reflns.number_all 9673 _reflns.number_obs 9673 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3D3J _refine.ls_number_reflns_obs 8273 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.97 _refine.ls_R_factor_obs 0.23197 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22901 _refine.ls_R_factor_R_free 0.29062 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 419 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.900 _refine.B_iso_mean 76.149 _refine.aniso_B[1][1] 3.94 _refine.aniso_B[2][2] 3.94 _refine.aniso_B[3][3] -7.87 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3D3K' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.887 _refine.pdbx_overall_ESU_R_Free 0.388 _refine.overall_SU_ML 0.426 _refine.overall_SU_B 48.974 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1791 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1821 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1833 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.978 1.977 ? 2492 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.954 5.000 ? 227 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.375 24.110 ? 73 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.586 15.000 ? 309 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8.721 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.066 0.200 ? 289 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1361 'X-RAY DIFFRACTION' ? r_nbd_refined 0.181 0.200 ? 849 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.299 0.200 ? 1229 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.171 0.200 ? 62 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.233 0.200 ? 48 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.159 0.200 ? 6 'X-RAY DIFFRACTION' ? r_mcbond_it 0.210 1.500 ? 1180 'X-RAY DIFFRACTION' ? r_mcangle_it 0.396 2.000 ? 1872 'X-RAY DIFFRACTION' ? r_scbond_it 0.472 3.000 ? 725 'X-RAY DIFFRACTION' ? r_scangle_it 0.792 4.500 ? 620 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.871 _refine_ls_shell.number_reflns_R_work 609 _refine_ls_shell.R_factor_R_work 0.309 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.383 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D3J _struct.title 'Crystal structure of human Edc3p' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3D3J _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'hEdc3, Phosphoprotein, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 81 ? HIS A 95 ? SER A 283 HIS A 297 1 ? 15 HELX_P HELX_P2 2 THR A 98 ? GLY A 119 ? THR A 300 GLY A 321 1 ? 22 HELX_P HELX_P3 3 HIS A 142 ? HIS A 158 ? HIS A 344 HIS A 360 1 ? 17 HELX_P HELX_P4 4 LEU A 173 ? LYS A 185 ? LEU A 375 LYS A 387 1 ? 13 HELX_P HELX_P5 5 ASN A 214 ? ASP A 219 ? ASN A 416 ASP A 421 5 ? 6 HELX_P HELX_P6 6 GLN A 220 ? ASN A 233 ? GLN A 422 ASN A 435 1 ? 14 HELX_P HELX_P7 7 GLY A 266 ? GLY A 270 ? GLY A 468 GLY A 472 5 ? 5 HELX_P HELX_P8 8 PRO A 280 ? VAL A 287 ? PRO A 482 VAL A 489 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 68 ? CYS A 70 ? GLU A 270 CYS A 272 A 2 VAL A 76 ? PRO A 78 ? VAL A 278 PRO A 280 B 1 GLN A 189 ? VAL A 191 ? GLN A 391 VAL A 393 B 2 GLN A 161 ? PHE A 165 ? GLN A 363 PHE A 367 B 3 THR A 134 ? CYS A 139 ? THR A 336 CYS A 341 B 4 LEU A 204 ? CYS A 208 ? LEU A 406 CYS A 410 B 5 VAL A 237 ? ILE A 240 ? VAL A 439 ILE A 442 B 6 TRP A 255 ? LEU A 259 ? TRP A 457 LEU A 461 B 7 ARG A 271 ? CYS A 275 ? ARG A 473 CYS A 477 B 8 VAL A 300 ? PRO A 302 ? VAL A 502 PRO A 504 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 69 ? N PHE A 271 O VAL A 77 ? O VAL A 279 B 1 2 O GLN A 189 ? O GLN A 391 N VAL A 162 ? N VAL A 364 B 2 3 O PHE A 165 ? O PHE A 367 N LEU A 137 ? N LEU A 339 B 3 4 N LEU A 138 ? N LEU A 340 O CYS A 208 ? O CYS A 410 B 4 5 N ASN A 207 ? N ASN A 409 O LEU A 238 ? O LEU A 440 B 5 6 N SER A 239 ? N SER A 441 O LEU A 257 ? O LEU A 459 B 6 7 N ALA A 258 ? N ALA A 460 O CYS A 275 ? O CYS A 477 B 7 8 N LEU A 274 ? N LEU A 476 O ILE A 301 ? O ILE A 503 # _database_PDB_matrix.entry_id 3D3J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3D3J _atom_sites.fract_transf_matrix[1][1] 0.008351 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008351 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010647 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 203 ? ? ? A . n A 1 2 PHE 2 204 ? ? ? A . n A 1 3 ASP 3 205 ? ? ? A . n A 1 4 PHE 4 206 ? ? ? A . n A 1 5 GLU 5 207 ? ? ? A . n A 1 6 GLY 6 208 ? ? ? A . n A 1 7 ASN 7 209 ? ? ? A . n A 1 8 LEU 8 210 ? ? ? A . n A 1 9 ALA 9 211 ? ? ? A . n A 1 10 LEU 10 212 ? ? ? A . n A 1 11 PHE 11 213 ? ? ? A . n A 1 12 ASP 12 214 ? ? ? A . n A 1 13 LYS 13 215 ? ? ? A . n A 1 14 ALA 14 216 ? ? ? A . n A 1 15 ALA 15 217 ? ? ? A . n A 1 16 VAL 16 218 ? ? ? A . n A 1 17 PHE 17 219 ? ? ? A . n A 1 18 GLU 18 220 ? ? ? A . n A 1 19 GLU 19 221 ? ? ? A . n A 1 20 ILE 20 222 ? ? ? A . n A 1 21 ASP 21 223 ? ? ? A . n A 1 22 THR 22 224 ? ? ? A . n A 1 23 TYR 23 225 ? ? ? A . n A 1 24 GLU 24 226 ? ? ? A . n A 1 25 ARG 25 227 ? ? ? A . n A 1 26 ARG 26 228 ? ? ? A . n A 1 27 SER 27 229 ? ? ? A . n A 1 28 GLY 28 230 ? ? ? A . n A 1 29 THR 29 231 ? ? ? A . n A 1 30 ARG 30 232 ? ? ? A . n A 1 31 SER 31 233 ? ? ? A . n A 1 32 ARG 32 234 ? ? ? A . n A 1 33 GLY 33 235 ? ? ? A . n A 1 34 ILE 34 236 ? ? ? A . n A 1 35 PRO 35 237 ? ? ? A . n A 1 36 ASN 36 238 ? ? ? A . n A 1 37 GLU 37 239 ? ? ? A . n A 1 38 ARG 38 240 ? ? ? A . n A 1 39 PRO 39 241 ? ? ? A . n A 1 40 THR 40 242 ? ? ? A . n A 1 41 ARG 41 243 ? ? ? A . n A 1 42 TYR 42 244 ? ? ? A . n A 1 43 ARG 43 245 ? ? ? A . n A 1 44 HIS 44 246 ? ? ? A . n A 1 45 ASP 45 247 ? ? ? A . n A 1 46 GLU 46 248 ? ? ? A . n A 1 47 ASN 47 249 ? ? ? A . n A 1 48 ILE 48 250 ? ? ? A . n A 1 49 LEU 49 251 ? ? ? A . n A 1 50 GLU 50 252 ? ? ? A . n A 1 51 SER 51 253 ? ? ? A . n A 1 52 GLU 52 254 ? ? ? A . n A 1 53 PRO 53 255 ? ? ? A . n A 1 54 ILE 54 256 ? ? ? A . n A 1 55 VAL 55 257 ? ? ? A . n A 1 56 TYR 56 258 258 TYR TYR A . n A 1 57 ARG 57 259 259 ARG ARG A . n A 1 58 ARG 58 260 260 ARG ARG A . n A 1 59 ILE 59 261 261 ILE ILE A . n A 1 60 ILE 60 262 262 ILE ILE A . n A 1 61 VAL 61 263 263 VAL VAL A . n A 1 62 PRO 62 264 264 PRO PRO A . n A 1 63 HIS 63 265 ? ? ? A . n A 1 64 ASN 64 266 ? ? ? A . n A 1 65 VAL 65 267 ? ? ? A . n A 1 66 SER 66 268 268 SER SER A . n A 1 67 LYS 67 269 269 LYS LYS A . n A 1 68 GLU 68 270 270 GLU GLU A . n A 1 69 PHE 69 271 271 PHE PHE A . n A 1 70 CYS 70 272 272 CYS CYS A . n A 1 71 THR 71 273 273 THR THR A . n A 1 72 ASP 72 274 274 ASP ASP A . n A 1 73 SER 73 275 275 SER SER A . n A 1 74 GLY 74 276 276 GLY GLY A . n A 1 75 LEU 75 277 277 LEU LEU A . n A 1 76 VAL 76 278 278 VAL VAL A . n A 1 77 VAL 77 279 279 VAL VAL A . n A 1 78 PRO 78 280 280 PRO PRO A . n A 1 79 SER 79 281 281 SER SER A . n A 1 80 ILE 80 282 282 ILE ILE A . n A 1 81 SER 81 283 283 SER SER A . n A 1 82 TYR 82 284 284 TYR TYR A . n A 1 83 GLU 83 285 285 GLU GLU A . n A 1 84 LEU 84 286 286 LEU LEU A . n A 1 85 HIS 85 287 287 HIS HIS A . n A 1 86 LYS 86 288 288 LYS LYS A . n A 1 87 LYS 87 289 289 LYS LYS A . n A 1 88 LEU 88 290 290 LEU LEU A . n A 1 89 LEU 89 291 291 LEU LEU A . n A 1 90 SER 90 292 292 SER SER A . n A 1 91 VAL 91 293 293 VAL VAL A . n A 1 92 ALA 92 294 294 ALA ALA A . n A 1 93 GLU 93 295 295 GLU GLU A . n A 1 94 LYS 94 296 296 LYS LYS A . n A 1 95 HIS 95 297 297 HIS HIS A . n A 1 96 GLY 96 298 298 GLY GLY A . n A 1 97 LEU 97 299 299 LEU LEU A . n A 1 98 THR 98 300 300 THR THR A . n A 1 99 LEU 99 301 301 LEU LEU A . n A 1 100 GLU 100 302 302 GLU GLU A . n A 1 101 ARG 101 303 303 ARG ARG A . n A 1 102 ARG 102 304 304 ARG ARG A . n A 1 103 LEU 103 305 305 LEU LEU A . n A 1 104 GLU 104 306 306 GLU GLU A . n A 1 105 MET 105 307 307 MET MET A . n A 1 106 THR 106 308 308 THR THR A . n A 1 107 GLY 107 309 309 GLY GLY A . n A 1 108 VAL 108 310 310 VAL VAL A . n A 1 109 CYS 109 311 311 CYS CYS A . n A 1 110 ALA 110 312 312 ALA ALA A . n A 1 111 SER 111 313 313 SER SER A . n A 1 112 GLN 112 314 314 GLN GLN A . n A 1 113 MET 113 315 315 MET MET A . n A 1 114 ALA 114 316 316 ALA ALA A . n A 1 115 LEU 115 317 317 LEU LEU A . n A 1 116 THR 116 318 318 THR THR A . n A 1 117 LEU 117 319 319 LEU LEU A . n A 1 118 LEU 118 320 320 LEU LEU A . n A 1 119 GLY 119 321 321 GLY GLY A . n A 1 120 GLY 120 322 ? ? ? A . n A 1 121 PRO 121 323 ? ? ? A . n A 1 122 ASN 122 324 ? ? ? A . n A 1 123 ARG 123 325 ? ? ? A . n A 1 124 LEU 124 326 ? ? ? A . n A 1 125 ASN 125 327 ? ? ? A . n A 1 126 PRO 126 328 ? ? ? A . n A 1 127 LYS 127 329 ? ? ? A . n A 1 128 ASN 128 330 ? ? ? A . n A 1 129 VAL 129 331 ? ? ? A . n A 1 130 HIS 130 332 ? ? ? A . n A 1 131 GLN 131 333 333 GLN GLN A . n A 1 132 ARG 132 334 334 ARG ARG A . n A 1 133 PRO 133 335 335 PRO PRO A . n A 1 134 THR 134 336 336 THR THR A . n A 1 135 VAL 135 337 337 VAL VAL A . n A 1 136 ALA 136 338 338 ALA ALA A . n A 1 137 LEU 137 339 339 LEU LEU A . n A 1 138 LEU 138 340 340 LEU LEU A . n A 1 139 CYS 139 341 341 CYS CYS A . n A 1 140 GLY 140 342 342 GLY GLY A . n A 1 141 PRO 141 343 343 PRO PRO A . n A 1 142 HIS 142 344 344 HIS HIS A . n A 1 143 VAL 143 345 345 VAL VAL A . n A 1 144 LYS 144 346 346 LYS LYS A . n A 1 145 GLY 145 347 347 GLY GLY A . n A 1 146 ALA 146 348 348 ALA ALA A . n A 1 147 GLN 147 349 349 GLN GLN A . n A 1 148 GLY 148 350 350 GLY GLY A . n A 1 149 ILE 149 351 351 ILE ILE A . n A 1 150 SER 150 352 352 SER SER A . n A 1 151 CYS 151 353 353 CYS CYS A . n A 1 152 GLY 152 354 354 GLY GLY A . n A 1 153 ARG 153 355 355 ARG ARG A . n A 1 154 HIS 154 356 356 HIS HIS A . n A 1 155 LEU 155 357 357 LEU LEU A . n A 1 156 ALA 156 358 358 ALA ALA A . n A 1 157 ASN 157 359 359 ASN ASN A . n A 1 158 HIS 158 360 360 HIS HIS A . n A 1 159 ASP 159 361 361 ASP ASP A . n A 1 160 VAL 160 362 362 VAL VAL A . n A 1 161 GLN 161 363 363 GLN GLN A . n A 1 162 VAL 162 364 364 VAL VAL A . n A 1 163 ILE 163 365 365 ILE ILE A . n A 1 164 LEU 164 366 366 LEU LEU A . n A 1 165 PHE 165 367 367 PHE PHE A . n A 1 166 LEU 166 368 368 LEU LEU A . n A 1 167 PRO 167 369 369 PRO PRO A . n A 1 168 ASN 168 370 370 ASN ASN A . n A 1 169 PHE 169 371 371 PHE PHE A . n A 1 170 VAL 170 372 372 VAL VAL A . n A 1 171 LYS 171 373 373 LYS LYS A . n A 1 172 MET 172 374 374 MET MET A . n A 1 173 LEU 173 375 375 LEU LEU A . n A 1 174 GLU 174 376 376 GLU GLU A . n A 1 175 SER 175 377 377 SER SER A . n A 1 176 ILE 176 378 378 ILE ILE A . n A 1 177 THR 177 379 379 THR THR A . n A 1 178 ASN 178 380 380 ASN ASN A . n A 1 179 GLU 179 381 381 GLU GLU A . n A 1 180 LEU 180 382 382 LEU LEU A . n A 1 181 SER 181 383 383 SER SER A . n A 1 182 LEU 182 384 384 LEU LEU A . n A 1 183 PHE 183 385 385 PHE PHE A . n A 1 184 SER 184 386 386 SER SER A . n A 1 185 LYS 185 387 387 LYS LYS A . n A 1 186 THR 186 388 388 THR THR A . n A 1 187 GLN 187 389 389 GLN GLN A . n A 1 188 GLY 188 390 390 GLY GLY A . n A 1 189 GLN 189 391 391 GLN GLN A . n A 1 190 GLN 190 392 392 GLN GLN A . n A 1 191 VAL 191 393 393 VAL VAL A . n A 1 192 SER 192 394 394 SER SER A . n A 1 193 SER 193 395 395 SER SER A . n A 1 194 LEU 194 396 396 LEU LEU A . n A 1 195 LYS 195 397 397 LYS LYS A . n A 1 196 ASP 196 398 398 ASP ASP A . n A 1 197 LEU 197 399 399 LEU LEU A . n A 1 198 PRO 198 400 400 PRO PRO A . n A 1 199 THR 199 401 401 THR THR A . n A 1 200 SER 200 402 402 SER SER A . n A 1 201 PRO 201 403 403 PRO PRO A . n A 1 202 VAL 202 404 404 VAL VAL A . n A 1 203 ASP 203 405 405 ASP ASP A . n A 1 204 LEU 204 406 406 LEU LEU A . n A 1 205 VAL 205 407 407 VAL VAL A . n A 1 206 ILE 206 408 408 ILE ILE A . n A 1 207 ASN 207 409 409 ASN ASN A . n A 1 208 CYS 208 410 410 CYS CYS A . n A 1 209 LEU 209 411 411 LEU LEU A . n A 1 210 ASP 210 412 412 ASP ASP A . n A 1 211 CYS 211 413 413 CYS CYS A . n A 1 212 PRO 212 414 414 PRO PRO A . n A 1 213 GLU 213 415 415 GLU GLU A . n A 1 214 ASN 214 416 416 ASN ASN A . n A 1 215 VAL 215 417 417 VAL VAL A . n A 1 216 PHE 216 418 418 PHE PHE A . n A 1 217 LEU 217 419 419 LEU LEU A . n A 1 218 ARG 218 420 420 ARG ARG A . n A 1 219 ASP 219 421 421 ASP ASP A . n A 1 220 GLN 220 422 422 GLN GLN A . n A 1 221 PRO 221 423 423 PRO PRO A . n A 1 222 TRP 222 424 424 TRP TRP A . n A 1 223 TYR 223 425 425 TYR TYR A . n A 1 224 LYS 224 426 426 LYS LYS A . n A 1 225 ALA 225 427 427 ALA ALA A . n A 1 226 ALA 226 428 428 ALA ALA A . n A 1 227 VAL 227 429 429 VAL VAL A . n A 1 228 ALA 228 430 430 ALA ALA A . n A 1 229 TRP 229 431 431 TRP TRP A . n A 1 230 ALA 230 432 432 ALA ALA A . n A 1 231 ASN 231 433 433 ASN ASN A . n A 1 232 GLN 232 434 434 GLN GLN A . n A 1 233 ASN 233 435 435 ASN ASN A . n A 1 234 ARG 234 436 436 ARG ARG A . n A 1 235 ALA 235 437 437 ALA ALA A . n A 1 236 PRO 236 438 438 PRO PRO A . n A 1 237 VAL 237 439 439 VAL VAL A . n A 1 238 LEU 238 440 440 LEU LEU A . n A 1 239 SER 239 441 441 SER SER A . n A 1 240 ILE 240 442 442 ILE ILE A . n A 1 241 ASP 241 443 443 ASP ASP A . n A 1 242 PRO 242 444 444 PRO PRO A . n A 1 243 PRO 243 445 445 PRO PRO A . n A 1 244 VAL 244 446 446 VAL VAL A . n A 1 245 HIS 245 447 447 HIS HIS A . n A 1 246 GLU 246 448 ? ? ? A . n A 1 247 VAL 247 449 ? ? ? A . n A 1 248 GLU 248 450 ? ? ? A . n A 1 249 GLN 249 451 ? ? ? A . n A 1 250 GLY 250 452 ? ? ? A . n A 1 251 ILE 251 453 453 ILE ILE A . n A 1 252 ASP 252 454 454 ASP ASP A . n A 1 253 ALA 253 455 455 ALA ALA A . n A 1 254 LYS 254 456 456 LYS LYS A . n A 1 255 TRP 255 457 457 TRP TRP A . n A 1 256 SER 256 458 458 SER SER A . n A 1 257 LEU 257 459 459 LEU LEU A . n A 1 258 ALA 258 460 460 ALA ALA A . n A 1 259 LEU 259 461 461 LEU LEU A . n A 1 260 GLY 260 462 462 GLY GLY A . n A 1 261 LEU 261 463 463 LEU LEU A . n A 1 262 PRO 262 464 464 PRO PRO A . n A 1 263 LEU 263 465 465 LEU LEU A . n A 1 264 PRO 264 466 466 PRO PRO A . n A 1 265 LEU 265 467 467 LEU LEU A . n A 1 266 GLY 266 468 468 GLY GLY A . n A 1 267 GLU 267 469 469 GLU GLU A . n A 1 268 HIS 268 470 470 HIS HIS A . n A 1 269 ALA 269 471 471 ALA ALA A . n A 1 270 GLY 270 472 472 GLY GLY A . n A 1 271 ARG 271 473 473 ARG ARG A . n A 1 272 ILE 272 474 474 ILE ILE A . n A 1 273 TYR 273 475 475 TYR TYR A . n A 1 274 LEU 274 476 476 LEU LEU A . n A 1 275 CYS 275 477 477 CYS CYS A . n A 1 276 ASP 276 478 478 ASP ASP A . n A 1 277 ILE 277 479 479 ILE ILE A . n A 1 278 GLY 278 480 480 GLY GLY A . n A 1 279 ILE 279 481 481 ILE ILE A . n A 1 280 PRO 280 482 482 PRO PRO A . n A 1 281 GLN 281 483 483 GLN GLN A . n A 1 282 GLN 282 484 484 GLN GLN A . n A 1 283 VAL 283 485 485 VAL VAL A . n A 1 284 PHE 284 486 486 PHE PHE A . n A 1 285 GLN 285 487 487 GLN GLN A . n A 1 286 GLU 286 488 488 GLU GLU A . n A 1 287 VAL 287 489 489 VAL VAL A . n A 1 288 GLY 288 490 490 GLY GLY A . n A 1 289 ILE 289 491 491 ILE ILE A . n A 1 290 ASN 290 492 492 ASN ASN A . n A 1 291 TYR 291 493 493 TYR TYR A . n A 1 292 HIS 292 494 494 HIS HIS A . n A 1 293 SER 293 495 495 SER SER A . n A 1 294 PRO 294 496 496 PRO PRO A . n A 1 295 PHE 295 497 497 PHE PHE A . n A 1 296 GLY 296 498 498 GLY GLY A . n A 1 297 CYS 297 499 499 CYS CYS A . n A 1 298 LYS 298 500 500 LYS LYS A . n A 1 299 PHE 299 501 501 PHE PHE A . n A 1 300 VAL 300 502 502 VAL VAL A . n A 1 301 ILE 301 503 503 ILE ILE A . n A 1 302 PRO 302 504 504 PRO PRO A . n A 1 303 LEU 303 505 505 LEU LEU A . n A 1 304 HIS 304 506 506 HIS HIS A . n A 1 305 SER 305 507 507 SER SER A . n A 1 306 ALA 306 508 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3520 ? 1 MORE -2 ? 1 'SSA (A^2)' 19980 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 15_545 y+1/2,x-1/2,-z+1/2 0.0000000000 1.0000000000 0.0000000000 59.8705000000 1.0000000000 0.0000000000 0.0000000000 -59.8705000000 0.0000000000 0.0000000000 -1.0000000000 46.9615000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 12 ? B HOH . 2 1 A HOH 22 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 19.5418 _pdbx_refine_tls.origin_y -40.6056 _pdbx_refine_tls.origin_z 9.4753 _pdbx_refine_tls.T[1][1] -0.2128 _pdbx_refine_tls.T[2][2] 0.2172 _pdbx_refine_tls.T[3][3] -0.2050 _pdbx_refine_tls.T[1][2] -0.2717 _pdbx_refine_tls.T[1][3] -0.0524 _pdbx_refine_tls.T[2][3] -0.0493 _pdbx_refine_tls.L[1][1] 7.0690 _pdbx_refine_tls.L[2][2] 4.3856 _pdbx_refine_tls.L[3][3] 7.3908 _pdbx_refine_tls.L[1][2] -1.7571 _pdbx_refine_tls.L[1][3] -0.5983 _pdbx_refine_tls.L[2][3] -0.7318 _pdbx_refine_tls.S[1][1] 0.1968 _pdbx_refine_tls.S[1][2] 1.4222 _pdbx_refine_tls.S[1][3] -0.3399 _pdbx_refine_tls.S[2][1] -0.3520 _pdbx_refine_tls.S[2][2] -0.2431 _pdbx_refine_tls.S[2][3] 0.1725 _pdbx_refine_tls.S[3][1] 1.0336 _pdbx_refine_tls.S[3][2] -1.3006 _pdbx_refine_tls.S[3][3] 0.0463 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 258 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 56 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 507 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 305 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ILE _pdbx_validate_close_contact.auth_seq_id_1 453 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 13 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 299 ? ? -65.52 91.00 2 1 HIS A 360 ? ? -95.36 33.77 3 1 VAL A 372 ? ? -79.97 -81.17 4 1 ARG A 436 ? ? 85.39 -19.38 5 1 PRO A 466 ? ? -66.04 81.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 203 ? A ASP 1 2 1 Y 1 A PHE 204 ? A PHE 2 3 1 Y 1 A ASP 205 ? A ASP 3 4 1 Y 1 A PHE 206 ? A PHE 4 5 1 Y 1 A GLU 207 ? A GLU 5 6 1 Y 1 A GLY 208 ? A GLY 6 7 1 Y 1 A ASN 209 ? A ASN 7 8 1 Y 1 A LEU 210 ? A LEU 8 9 1 Y 1 A ALA 211 ? A ALA 9 10 1 Y 1 A LEU 212 ? A LEU 10 11 1 Y 1 A PHE 213 ? A PHE 11 12 1 Y 1 A ASP 214 ? A ASP 12 13 1 Y 1 A LYS 215 ? A LYS 13 14 1 Y 1 A ALA 216 ? A ALA 14 15 1 Y 1 A ALA 217 ? A ALA 15 16 1 Y 1 A VAL 218 ? A VAL 16 17 1 Y 1 A PHE 219 ? A PHE 17 18 1 Y 1 A GLU 220 ? A GLU 18 19 1 Y 1 A GLU 221 ? A GLU 19 20 1 Y 1 A ILE 222 ? A ILE 20 21 1 Y 1 A ASP 223 ? A ASP 21 22 1 Y 1 A THR 224 ? A THR 22 23 1 Y 1 A TYR 225 ? A TYR 23 24 1 Y 1 A GLU 226 ? A GLU 24 25 1 Y 1 A ARG 227 ? A ARG 25 26 1 Y 1 A ARG 228 ? A ARG 26 27 1 Y 1 A SER 229 ? A SER 27 28 1 Y 1 A GLY 230 ? A GLY 28 29 1 Y 1 A THR 231 ? A THR 29 30 1 Y 1 A ARG 232 ? A ARG 30 31 1 Y 1 A SER 233 ? A SER 31 32 1 Y 1 A ARG 234 ? A ARG 32 33 1 Y 1 A GLY 235 ? A GLY 33 34 1 Y 1 A ILE 236 ? A ILE 34 35 1 Y 1 A PRO 237 ? A PRO 35 36 1 Y 1 A ASN 238 ? A ASN 36 37 1 Y 1 A GLU 239 ? A GLU 37 38 1 Y 1 A ARG 240 ? A ARG 38 39 1 Y 1 A PRO 241 ? A PRO 39 40 1 Y 1 A THR 242 ? A THR 40 41 1 Y 1 A ARG 243 ? A ARG 41 42 1 Y 1 A TYR 244 ? A TYR 42 43 1 Y 1 A ARG 245 ? A ARG 43 44 1 Y 1 A HIS 246 ? A HIS 44 45 1 Y 1 A ASP 247 ? A ASP 45 46 1 Y 1 A GLU 248 ? A GLU 46 47 1 Y 1 A ASN 249 ? A ASN 47 48 1 Y 1 A ILE 250 ? A ILE 48 49 1 Y 1 A LEU 251 ? A LEU 49 50 1 Y 1 A GLU 252 ? A GLU 50 51 1 Y 1 A SER 253 ? A SER 51 52 1 Y 1 A GLU 254 ? A GLU 52 53 1 Y 1 A PRO 255 ? A PRO 53 54 1 Y 1 A ILE 256 ? A ILE 54 55 1 Y 1 A VAL 257 ? A VAL 55 56 1 Y 1 A HIS 265 ? A HIS 63 57 1 Y 1 A ASN 266 ? A ASN 64 58 1 Y 1 A VAL 267 ? A VAL 65 59 1 Y 1 A GLY 322 ? A GLY 120 60 1 Y 1 A PRO 323 ? A PRO 121 61 1 Y 1 A ASN 324 ? A ASN 122 62 1 Y 1 A ARG 325 ? A ARG 123 63 1 Y 1 A LEU 326 ? A LEU 124 64 1 Y 1 A ASN 327 ? A ASN 125 65 1 Y 1 A PRO 328 ? A PRO 126 66 1 Y 1 A LYS 329 ? A LYS 127 67 1 Y 1 A ASN 330 ? A ASN 128 68 1 Y 1 A VAL 331 ? A VAL 129 69 1 Y 1 A HIS 332 ? A HIS 130 70 1 Y 1 A GLU 448 ? A GLU 246 71 1 Y 1 A VAL 449 ? A VAL 247 72 1 Y 1 A GLU 450 ? A GLU 248 73 1 Y 1 A GLN 451 ? A GLN 249 74 1 Y 1 A GLY 452 ? A GLY 250 75 1 Y 1 A ALA 508 ? A ALA 306 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3D3K _pdbx_initial_refinement_model.details 'PDB ENTRY 3D3K' #