data_3D3O # _entry.id 3D3O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3D3O RCSB RCSB047551 WWPDB D_1000047551 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC87506.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3D3O _pdbx_database_status.recvd_initial_deposition_date 2008-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Shackelford, G.' 2 'Joachimiak, A.' 3 'Midwest Center for Structural Genomics (MCSG)' 4 # _citation.id primary _citation.title 'Crystal Structure of the Effector Domain of the Putative Transcriptional Regulator IclR from Acinetobacter sp. ADP1.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Shackelford, G.' 2 primary 'Joachimiak, A.' 3 # _cell.entry_id 3D3O _cell.length_a 60.382 _cell.length_b 71.681 _cell.length_c 96.222 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D3O _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative transcriptional regulator, IcIR family' 20524.051 2 ? ? 'Effector domain: Residues 81-255' ? 2 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 3 non-polymer syn 'AMMONIUM ION' 18.038 1 ? ? ? ? 4 water nat water 18.015 104 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNALFSSRDILEVLQDIH(MSE)ETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLT(MSE)SSNGW(MSE)L (MSE)ST(MSE)NDKAIDNTVRRANTITQKDGIRFEVDD(MSE)(MSE)ARIRQVREQGYASAEHIPFVGGGTICVLLP (MSE)TIQGQPVT(MSE)GLGGALDRIKQNYDRYLELLLNGVQQLKKSDSFHQPI ; _entity_poly.pdbx_seq_one_letter_code_can ;SNALFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNT VRRANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLEL LLNGVQQLKKSDSFHQPI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC87506.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 LEU n 1 5 PHE n 1 6 SER n 1 7 SER n 1 8 ARG n 1 9 ASP n 1 10 ILE n 1 11 LEU n 1 12 GLU n 1 13 VAL n 1 14 LEU n 1 15 GLN n 1 16 ASP n 1 17 ILE n 1 18 HIS n 1 19 MSE n 1 20 GLU n 1 21 THR n 1 22 GLY n 1 23 GLU n 1 24 THR n 1 25 VAL n 1 26 ALA n 1 27 ILE n 1 28 ALA n 1 29 THR n 1 30 LYS n 1 31 ASN n 1 32 ASP n 1 33 ILE n 1 34 TYR n 1 35 LEU n 1 36 GLN n 1 37 TYR n 1 38 ILE n 1 39 GLN n 1 40 ILE n 1 41 ILE n 1 42 GLU n 1 43 SER n 1 44 VAL n 1 45 HIS n 1 46 ALA n 1 47 LEU n 1 48 ARG n 1 49 PHE n 1 50 HIS n 1 51 VAL n 1 52 ASP n 1 53 GLU n 1 54 ASN n 1 55 ALA n 1 56 ILE n 1 57 ARG n 1 58 PRO n 1 59 LEU n 1 60 THR n 1 61 MSE n 1 62 SER n 1 63 SER n 1 64 ASN n 1 65 GLY n 1 66 TRP n 1 67 MSE n 1 68 LEU n 1 69 MSE n 1 70 SER n 1 71 THR n 1 72 MSE n 1 73 ASN n 1 74 ASP n 1 75 LYS n 1 76 ALA n 1 77 ILE n 1 78 ASP n 1 79 ASN n 1 80 THR n 1 81 VAL n 1 82 ARG n 1 83 ARG n 1 84 ALA n 1 85 ASN n 1 86 THR n 1 87 ILE n 1 88 THR n 1 89 GLN n 1 90 LYS n 1 91 ASP n 1 92 GLY n 1 93 ILE n 1 94 ARG n 1 95 PHE n 1 96 GLU n 1 97 VAL n 1 98 ASP n 1 99 ASP n 1 100 MSE n 1 101 MSE n 1 102 ALA n 1 103 ARG n 1 104 ILE n 1 105 ARG n 1 106 GLN n 1 107 VAL n 1 108 ARG n 1 109 GLU n 1 110 GLN n 1 111 GLY n 1 112 TYR n 1 113 ALA n 1 114 SER n 1 115 ALA n 1 116 GLU n 1 117 HIS n 1 118 ILE n 1 119 PRO n 1 120 PHE n 1 121 VAL n 1 122 GLY n 1 123 GLY n 1 124 GLY n 1 125 THR n 1 126 ILE n 1 127 CYS n 1 128 VAL n 1 129 LEU n 1 130 LEU n 1 131 PRO n 1 132 MSE n 1 133 THR n 1 134 ILE n 1 135 GLN n 1 136 GLY n 1 137 GLN n 1 138 PRO n 1 139 VAL n 1 140 THR n 1 141 MSE n 1 142 GLY n 1 143 LEU n 1 144 GLY n 1 145 GLY n 1 146 ALA n 1 147 LEU n 1 148 ASP n 1 149 ARG n 1 150 ILE n 1 151 LYS n 1 152 GLN n 1 153 ASN n 1 154 TYR n 1 155 ASP n 1 156 ARG n 1 157 TYR n 1 158 LEU n 1 159 GLU n 1 160 LEU n 1 161 LEU n 1 162 LEU n 1 163 ASN n 1 164 GLY n 1 165 VAL n 1 166 GLN n 1 167 GLN n 1 168 LEU n 1 169 LYS n 1 170 LYS n 1 171 SER n 1 172 ASP n 1 173 SER n 1 174 PHE n 1 175 HIS n 1 176 GLN n 1 177 PRO n 1 178 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ACIAD1822 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ADP1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'N-term 6-His-tag with TEV protease cleavage site' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acinetobacter sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 62977 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6FBA6_ACIAD _struct_ref.pdbx_db_accession Q6FBA6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LFSSRDILEVLQDIHMETGETVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMNDKAIDNTVRR ANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGGGTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLN GVQQLKKSDSFHQPI ; _struct_ref.pdbx_align_begin 81 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3D3O A 4 ? 178 ? Q6FBA6 81 ? 255 ? 1 175 2 1 3D3O B 4 ? 178 ? Q6FBA6 81 ? 255 ? 1 175 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3D3O SER A 1 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' -2 1 1 3D3O ASN A 2 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' -1 2 1 3D3O ALA A 3 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' 0 3 2 3D3O SER B 1 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' -2 4 2 3D3O ASN B 2 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' -1 5 2 3D3O ALA B 3 ? UNP Q6FBA6 ? ? 'EXPRESSION TAG' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3D3O _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pdbx_details '1.26M Ammonium sulfate, 0.1M CHES pH 9.5, 0.2M NaCl, pH 8.3, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-02-27 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 3D3O _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.46 _reflns.d_resolution_low 35.84 _reflns.number_all 15652 _reflns.number_obs 15652 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.0 _reflns.B_iso_Wilson_estimate 53.69 _reflns.pdbx_redundancy 9.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.46 _reflns_shell.d_res_low 2.50 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.850 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 9.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 778 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3D3O _refine.ls_number_reflns_obs 14818 _refine.ls_number_reflns_all 14818 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.84 _refine.ls_d_res_high 2.46 _refine.ls_percent_reflns_obs 99.17 _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all 0.198 _refine.ls_R_factor_R_work 0.195 _refine.ls_R_factor_R_free 0.269 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 780 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.897 _refine.B_iso_mean 64.159 _refine.aniso_B[1][1] -1.16 _refine.aniso_B[2][2] 0.24 _refine.aniso_B[3][3] 0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.499 _refine.pdbx_overall_ESU_R_Free 0.304 _refine.overall_SU_ML 0.217 _refine.overall_SU_B 19.088 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2744 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 2874 _refine_hist.d_res_high 2.46 _refine_hist.d_res_low 35.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2927 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.656 1.961 ? 3970 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.521 5.000 ? 370 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.160 24.414 ? 145 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.048 15.000 ? 542 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.127 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 444 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2220 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.247 0.200 ? 1379 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 2041 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.195 0.200 ? 156 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.215 0.200 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.154 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.986 1.500 ? 1847 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.599 2.000 ? 2917 'X-RAY DIFFRACTION' ? r_scbond_it 2.386 3.000 ? 1195 'X-RAY DIFFRACTION' ? r_scangle_it 3.462 4.500 ? 1053 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.460 _refine_ls_shell.d_res_low 2.524 _refine_ls_shell.number_reflns_R_work 1075 _refine_ls_shell.R_factor_R_work 0.298 _refine_ls_shell.percent_reflns_obs 98.52 _refine_ls_shell.R_factor_R_free 0.413 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1128 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D3O _struct.title 'Crystal structure of the effector domain of the putative transcriptional regulator IclR from Acinetobacter sp. ADP1' _struct.pdbx_descriptor 'Putative transcriptional regulator, IcIR family' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3D3O _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' _struct_keywords.text ;alpha-beta structure, effector domain, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, TRANSCRIPTION REGULATOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details 'AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLY A 22 ? ASN A -1 GLY A 19 1 ? 21 HELX_P HELX_P2 2 PRO A 58 ? MSE A 61 ? PRO A 55 MSE A 58 5 ? 4 HELX_P HELX_P3 3 SER A 62 ? SER A 70 ? SER A 59 SER A 67 1 ? 9 HELX_P HELX_P4 4 ASN A 73 ? GLN A 89 ? ASN A 70 GLN A 86 1 ? 17 HELX_P HELX_P5 5 LYS A 90 ? GLY A 92 ? LYS A 87 GLY A 89 5 ? 3 HELX_P HELX_P6 6 GLU A 96 ? GLY A 111 ? GLU A 93 GLY A 108 1 ? 16 HELX_P HELX_P7 7 LEU A 147 ? LYS A 169 ? LEU A 144 LYS A 166 1 ? 23 HELX_P HELX_P8 8 ASN B 2 ? GLY B 22 ? ASN B -1 GLY B 19 1 ? 21 HELX_P HELX_P9 9 SER B 62 ? SER B 70 ? SER B 59 SER B 67 1 ? 9 HELX_P HELX_P10 10 ASN B 73 ? GLN B 89 ? ASN B 70 GLN B 86 1 ? 17 HELX_P HELX_P11 11 LYS B 90 ? GLY B 92 ? LYS B 87 GLY B 89 5 ? 3 HELX_P HELX_P12 12 VAL B 97 ? GLY B 111 ? VAL B 94 GLY B 108 1 ? 15 HELX_P HELX_P13 13 LEU B 147 ? ASN B 153 ? LEU B 144 ASN B 150 1 ? 7 HELX_P HELX_P14 14 ASN B 153 ? LYS B 169 ? ASN B 150 LYS B 166 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A HIS 18 C ? ? ? 1_555 A MSE 19 N ? ? A HIS 15 A MSE 16 1_555 ? ? ? ? ? ? ? 1.319 ? covale2 covale ? ? A MSE 19 C ? ? ? 1_555 A GLU 20 N ? ? A MSE 16 A GLU 17 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale ? ? A THR 60 C ? ? ? 1_555 A MSE 61 N ? ? A THR 57 A MSE 58 1_555 ? ? ? ? ? ? ? 1.322 ? covale4 covale ? ? A MSE 61 C ? ? ? 1_555 A SER 62 N ? ? A MSE 58 A SER 59 1_555 ? ? ? ? ? ? ? 1.338 ? covale5 covale ? ? A TRP 66 C ? ? ? 1_555 A MSE 67 N ? ? A TRP 63 A MSE 64 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 67 C ? ? ? 1_555 A LEU 68 N ? ? A MSE 64 A LEU 65 1_555 ? ? ? ? ? ? ? 1.340 ? covale7 covale ? ? A LEU 68 C ? ? ? 1_555 A MSE 69 N ? ? A LEU 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A MSE 69 C ? ? ? 1_555 A SER 70 N ? ? A MSE 66 A SER 67 1_555 ? ? ? ? ? ? ? 1.339 ? covale9 covale ? ? A THR 71 C ? ? ? 1_555 A MSE 72 N ? ? A THR 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.339 ? covale10 covale ? ? A MSE 72 C ? ? ? 1_555 A ASN 73 N ? ? A MSE 69 A ASN 70 1_555 ? ? ? ? ? ? ? 1.336 ? covale11 covale ? ? A ASP 99 C A ? ? 1_555 A MSE 100 N ? ? A ASP 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.320 ? covale12 covale ? ? A ASP 99 C B ? ? 1_555 A MSE 100 N ? ? A ASP 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.325 ? covale13 covale ? ? A MSE 100 C ? ? ? 1_555 A MSE 101 N ? ? A MSE 97 A MSE 98 1_555 ? ? ? ? ? ? ? 1.334 ? covale14 covale ? ? A MSE 101 C ? ? ? 1_555 A ALA 102 N ? ? A MSE 98 A ALA 99 1_555 ? ? ? ? ? ? ? 1.328 ? covale15 covale ? ? A PRO 131 C ? ? ? 1_555 A MSE 132 N ? ? A PRO 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.322 ? covale16 covale ? ? A MSE 132 C ? ? ? 1_555 A THR 133 N ? ? A MSE 129 A THR 130 1_555 ? ? ? ? ? ? ? 1.327 ? covale17 covale ? ? A THR 140 C ? ? ? 1_555 A MSE 141 N ? ? A THR 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.318 ? covale18 covale ? ? A MSE 141 C ? ? ? 1_555 A GLY 142 N ? ? A MSE 138 A GLY 139 1_555 ? ? ? ? ? ? ? 1.326 ? covale19 covale ? ? B HIS 18 C ? ? ? 1_555 B MSE 19 N A ? B HIS 15 B MSE 16 1_555 ? ? ? ? ? ? ? 1.338 ? covale20 covale ? ? B HIS 18 C ? ? ? 1_555 B MSE 19 N B ? B HIS 15 B MSE 16 1_555 ? ? ? ? ? ? ? 1.333 ? covale21 covale ? ? B MSE 19 C A ? ? 1_555 B GLU 20 N ? ? B MSE 16 B GLU 17 1_555 ? ? ? ? ? ? ? 1.329 ? covale22 covale ? ? B MSE 19 C B ? ? 1_555 B GLU 20 N ? ? B MSE 16 B GLU 17 1_555 ? ? ? ? ? ? ? 1.336 ? covale23 covale ? ? B THR 60 C ? ? ? 1_555 B MSE 61 N ? ? B THR 57 B MSE 58 1_555 ? ? ? ? ? ? ? 1.323 ? covale24 covale ? ? B MSE 61 C ? ? ? 1_555 B SER 62 N ? ? B MSE 58 B SER 59 1_555 ? ? ? ? ? ? ? 1.329 ? covale25 covale ? ? B TRP 66 C ? ? ? 1_555 B MSE 67 N ? ? B TRP 63 B MSE 64 1_555 ? ? ? ? ? ? ? 1.332 ? covale26 covale ? ? B MSE 67 C ? ? ? 1_555 B LEU 68 N ? ? B MSE 64 B LEU 65 1_555 ? ? ? ? ? ? ? 1.330 ? covale27 covale ? ? B LEU 68 C ? ? ? 1_555 B MSE 69 N ? ? B LEU 65 B MSE 66 1_555 ? ? ? ? ? ? ? 1.326 ? covale28 covale ? ? B MSE 69 C ? ? ? 1_555 B SER 70 N ? ? B MSE 66 B SER 67 1_555 ? ? ? ? ? ? ? 1.324 ? covale29 covale ? ? B THR 71 C ? ? ? 1_555 B MSE 72 N ? ? B THR 68 B MSE 69 1_555 ? ? ? ? ? ? ? 1.331 ? covale30 covale ? ? B MSE 72 C ? ? ? 1_555 B ASN 73 N ? ? B MSE 69 B ASN 70 1_555 ? ? ? ? ? ? ? 1.332 ? covale31 covale ? ? B ASP 99 C ? ? ? 1_555 B MSE 100 N ? ? B ASP 96 B MSE 97 1_555 ? ? ? ? ? ? ? 1.333 ? covale32 covale ? ? B MSE 100 C ? ? ? 1_555 B MSE 101 N ? ? B MSE 97 B MSE 98 1_555 ? ? ? ? ? ? ? 1.343 ? covale33 covale ? ? B MSE 101 C ? ? ? 1_555 B ALA 102 N ? ? B MSE 98 B ALA 99 1_555 ? ? ? ? ? ? ? 1.329 ? covale34 covale ? ? B PRO 131 C ? ? ? 1_555 B MSE 132 N ? ? B PRO 128 B MSE 129 1_555 ? ? ? ? ? ? ? 1.326 ? covale35 covale ? ? B MSE 132 C ? ? ? 1_555 B THR 133 N ? ? B MSE 129 B THR 130 1_555 ? ? ? ? ? ? ? 1.330 ? covale36 covale ? ? B THR 140 C ? ? ? 1_555 B MSE 141 N ? ? B THR 137 B MSE 138 1_555 ? ? ? ? ? ? ? 1.332 ? covale37 covale ? ? B MSE 141 C ? ? ? 1_555 B GLY 142 N ? ? B MSE 138 B GLY 139 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 118 A . ? ILE 115 A PRO 119 A ? PRO 116 A 1 7.98 2 ILE 118 B . ? ILE 115 B PRO 119 B ? PRO 116 B 1 5.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 34 ? ILE A 41 ? TYR A 31 ILE A 38 A 2 THR A 24 ? ASN A 31 ? THR A 21 ASN A 28 A 3 GLN A 137 ? ALA A 146 ? GLN A 134 ALA A 143 A 4 GLY A 123 ? ILE A 134 ? GLY A 120 ILE A 131 A 5 TYR A 112 ? GLU A 116 ? TYR A 109 GLU A 113 B 1 ARG A 48 ? PHE A 49 ? ARG A 45 PHE A 46 B 2 LEU B 47 ? ARG B 48 ? LEU B 44 ARG B 45 C 1 ARG B 57 ? PRO B 58 ? ARG B 54 PRO B 55 C 2 TYR B 34 ? ILE B 41 ? TYR B 31 ILE B 38 C 3 THR B 24 ? ASN B 31 ? THR B 21 ASN B 28 C 4 VAL B 139 ? ALA B 146 ? VAL B 136 ALA B 143 C 5 GLY B 123 ? LEU B 129 ? GLY B 120 LEU B 126 C 6 TYR B 112 ? GLU B 116 ? TYR B 109 GLU B 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 38 ? O ILE A 35 N ILE A 27 ? N ILE A 24 A 2 3 N ALA A 28 ? N ALA A 25 O THR A 140 ? O THR A 137 A 3 4 O MSE A 141 ? O MSE A 138 N VAL A 128 ? N VAL A 125 A 4 5 O CYS A 127 ? O CYS A 124 N ALA A 113 ? N ALA A 110 B 1 2 N ARG A 48 ? N ARG A 45 O ARG B 48 ? O ARG B 45 C 1 2 O ARG B 57 ? O ARG B 54 N LEU B 35 ? N LEU B 32 C 2 3 O GLN B 36 ? O GLN B 33 N THR B 29 ? N THR B 26 C 3 4 N ALA B 26 ? N ALA B 23 O GLY B 142 ? O GLY B 139 C 4 5 O MSE B 141 ? O MSE B 138 N VAL B 128 ? N VAL B 125 C 5 6 O CYS B 127 ? O CYS B 124 N ALA B 113 ? N ALA B 110 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 176' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 177' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 B 176' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 B 177' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 B 178' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TYR A 37 ? TYR A 34 . ? 1_555 ? 2 AC1 4 PHE A 49 ? PHE A 46 . ? 1_555 ? 3 AC1 4 LEU A 143 ? LEU A 140 . ? 1_555 ? 4 AC1 4 GLY A 144 ? GLY A 141 . ? 1_555 ? 5 AC2 4 TYR A 37 ? TYR A 34 . ? 1_555 ? 6 AC2 4 ARG A 57 ? ARG A 54 . ? 1_555 ? 7 AC2 4 PHE A 120 ? PHE A 117 . ? 1_555 ? 8 AC2 4 ALA B 46 ? ALA B 43 . ? 1_555 ? 9 AC3 4 ASN B 54 ? ASN B 51 . ? 4_566 ? 10 AC3 4 ARG B 103 ? ARG B 100 . ? 1_555 ? 11 AC3 4 ALA B 115 ? ALA B 112 . ? 1_555 ? 12 AC3 4 GLU B 116 ? GLU B 113 . ? 1_555 ? 13 AC4 5 ILE B 56 ? ILE B 53 . ? 4_566 ? 14 AC4 5 SER B 114 ? SER B 111 . ? 1_555 ? 15 AC4 5 ALA B 115 ? ALA B 112 . ? 1_555 ? 16 AC4 5 GLU B 116 ? GLU B 113 . ? 1_555 ? 17 AC4 5 TYR B 154 ? TYR B 151 . ? 1_555 ? 18 AC5 6 ALA B 26 ? ALA B 23 . ? 1_555 ? 19 AC5 6 TYR B 37 ? TYR B 34 . ? 1_555 ? 20 AC5 6 ASN B 64 ? ASN B 61 . ? 1_555 ? 21 AC5 6 THR B 125 ? THR B 122 . ? 1_555 ? 22 AC5 6 GLY B 142 ? GLY B 139 . ? 1_555 ? 23 AC5 6 LEU B 143 ? LEU B 140 . ? 1_555 ? # _database_PDB_matrix.entry_id 3D3O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3D3O _atom_sites.fract_transf_matrix[1][1] 0.016561 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013951 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010393 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 -2 SER SER A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 LEU 4 1 1 LEU LEU A . n A 1 5 PHE 5 2 2 PHE PHE A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 SER 7 4 4 SER SER A . n A 1 8 ARG 8 5 5 ARG ARG A . n A 1 9 ASP 9 6 6 ASP ASP A . n A 1 10 ILE 10 7 7 ILE ILE A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 GLN 15 12 12 GLN GLN A . n A 1 16 ASP 16 13 13 ASP ASP A . n A 1 17 ILE 17 14 14 ILE ILE A . n A 1 18 HIS 18 15 15 HIS HIS A . n A 1 19 MSE 19 16 16 MSE MSE A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 THR 21 18 18 THR THR A . n A 1 22 GLY 22 19 19 GLY GLY A . n A 1 23 GLU 23 20 20 GLU GLU A . n A 1 24 THR 24 21 21 THR THR A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 ALA 26 23 23 ALA ALA A . n A 1 27 ILE 27 24 24 ILE ILE A . n A 1 28 ALA 28 25 25 ALA ALA A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 LYS 30 27 27 LYS LYS A . n A 1 31 ASN 31 28 28 ASN ASN A . n A 1 32 ASP 32 29 29 ASP ASP A . n A 1 33 ILE 33 30 30 ILE ILE A . n A 1 34 TYR 34 31 31 TYR TYR A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 GLN 36 33 33 GLN GLN A . n A 1 37 TYR 37 34 34 TYR TYR A . n A 1 38 ILE 38 35 35 ILE ILE A . n A 1 39 GLN 39 36 36 GLN GLN A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 GLU 42 39 39 GLU GLU A . n A 1 43 SER 43 40 40 SER SER A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 HIS 45 42 42 HIS HIS A . n A 1 46 ALA 46 43 43 ALA ALA A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 PHE 49 46 46 PHE PHE A . n A 1 50 HIS 50 47 47 HIS HIS A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 ASP 52 49 49 ASP ASP A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 ASN 54 51 51 ASN ASN A . n A 1 55 ALA 55 52 52 ALA ALA A . n A 1 56 ILE 56 53 53 ILE ILE A . n A 1 57 ARG 57 54 54 ARG ARG A . n A 1 58 PRO 58 55 55 PRO PRO A . n A 1 59 LEU 59 56 56 LEU LEU A . n A 1 60 THR 60 57 57 THR THR A . n A 1 61 MSE 61 58 58 MSE MSE A . n A 1 62 SER 62 59 59 SER SER A . n A 1 63 SER 63 60 60 SER SER A . n A 1 64 ASN 64 61 61 ASN ASN A . n A 1 65 GLY 65 62 62 GLY GLY A . n A 1 66 TRP 66 63 63 TRP TRP A . n A 1 67 MSE 67 64 64 MSE MSE A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 MSE 69 66 66 MSE MSE A . n A 1 70 SER 70 67 67 SER SER A . n A 1 71 THR 71 68 68 THR THR A . n A 1 72 MSE 72 69 69 MSE MSE A . n A 1 73 ASN 73 70 70 ASN ASN A . n A 1 74 ASP 74 71 71 ASP ASP A . n A 1 75 LYS 75 72 72 LYS LYS A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 ILE 77 74 74 ILE ILE A . n A 1 78 ASP 78 75 75 ASP ASP A . n A 1 79 ASN 79 76 76 ASN ASN A . n A 1 80 THR 80 77 77 THR THR A . n A 1 81 VAL 81 78 78 VAL VAL A . n A 1 82 ARG 82 79 79 ARG ARG A . n A 1 83 ARG 83 80 80 ARG ARG A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 THR 86 83 83 THR THR A . n A 1 87 ILE 87 84 84 ILE ILE A . n A 1 88 THR 88 85 85 THR THR A . n A 1 89 GLN 89 86 86 GLN GLN A . n A 1 90 LYS 90 87 87 LYS LYS A . n A 1 91 ASP 91 88 88 ASP ASP A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 ILE 93 90 90 ILE ILE A . n A 1 94 ARG 94 91 91 ARG ARG A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 GLU 96 93 93 GLU GLU A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 ASP 98 95 95 ASP ASP A . n A 1 99 ASP 99 96 96 ASP ASP A . n A 1 100 MSE 100 97 97 MSE MSE A . n A 1 101 MSE 101 98 98 MSE MSE A . n A 1 102 ALA 102 99 99 ALA ALA A . n A 1 103 ARG 103 100 100 ARG ARG A . n A 1 104 ILE 104 101 101 ILE ILE A . n A 1 105 ARG 105 102 102 ARG ARG A . n A 1 106 GLN 106 103 103 GLN GLN A . n A 1 107 VAL 107 104 104 VAL VAL A . n A 1 108 ARG 108 105 105 ARG ARG A . n A 1 109 GLU 109 106 106 GLU GLU A . n A 1 110 GLN 110 107 107 GLN GLN A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 TYR 112 109 109 TYR TYR A . n A 1 113 ALA 113 110 110 ALA ALA A . n A 1 114 SER 114 111 111 SER SER A . n A 1 115 ALA 115 112 112 ALA ALA A . n A 1 116 GLU 116 113 113 GLU GLU A . n A 1 117 HIS 117 114 114 HIS HIS A . n A 1 118 ILE 118 115 115 ILE ILE A . n A 1 119 PRO 119 116 116 PRO PRO A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 GLY 122 119 119 GLY GLY A . n A 1 123 GLY 123 120 120 GLY GLY A . n A 1 124 GLY 124 121 121 GLY GLY A . n A 1 125 THR 125 122 122 THR THR A . n A 1 126 ILE 126 123 123 ILE ILE A . n A 1 127 CYS 127 124 124 CYS CYS A . n A 1 128 VAL 128 125 125 VAL VAL A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 PRO 131 128 128 PRO PRO A . n A 1 132 MSE 132 129 129 MSE MSE A . n A 1 133 THR 133 130 130 THR THR A . n A 1 134 ILE 134 131 131 ILE ILE A . n A 1 135 GLN 135 132 132 GLN GLN A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 GLN 137 134 134 GLN GLN A . n A 1 138 PRO 138 135 135 PRO PRO A . n A 1 139 VAL 139 136 136 VAL VAL A . n A 1 140 THR 140 137 137 THR THR A . n A 1 141 MSE 141 138 138 MSE MSE A . n A 1 142 GLY 142 139 139 GLY GLY A . n A 1 143 LEU 143 140 140 LEU LEU A . n A 1 144 GLY 144 141 141 GLY GLY A . n A 1 145 GLY 145 142 142 GLY GLY A . n A 1 146 ALA 146 143 143 ALA ALA A . n A 1 147 LEU 147 144 144 LEU LEU A . n A 1 148 ASP 148 145 145 ASP ASP A . n A 1 149 ARG 149 146 146 ARG ARG A . n A 1 150 ILE 150 147 147 ILE ILE A . n A 1 151 LYS 151 148 148 LYS LYS A . n A 1 152 GLN 152 149 149 GLN GLN A . n A 1 153 ASN 153 150 150 ASN ASN A . n A 1 154 TYR 154 151 151 TYR TYR A . n A 1 155 ASP 155 152 152 ASP ASP A . n A 1 156 ARG 156 153 153 ARG ARG A . n A 1 157 TYR 157 154 154 TYR TYR A . n A 1 158 LEU 158 155 155 LEU LEU A . n A 1 159 GLU 159 156 156 GLU GLU A . n A 1 160 LEU 160 157 157 LEU LEU A . n A 1 161 LEU 161 158 158 LEU LEU A . n A 1 162 LEU 162 159 159 LEU LEU A . n A 1 163 ASN 163 160 160 ASN ASN A . n A 1 164 GLY 164 161 161 GLY GLY A . n A 1 165 VAL 165 162 162 VAL VAL A . n A 1 166 GLN 166 163 163 GLN GLN A . n A 1 167 GLN 167 164 164 GLN GLN A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 LYS 169 166 166 LYS LYS A . n A 1 170 LYS 170 167 167 LYS LYS A . n A 1 171 SER 171 168 168 SER SER A . n A 1 172 ASP 172 169 169 ASP ASP A . n A 1 173 SER 173 170 170 SER SER A . n A 1 174 PHE 174 171 171 PHE PHE A . n A 1 175 HIS 175 172 172 HIS HIS A . n A 1 176 GLN 176 173 173 GLN GLN A . n A 1 177 PRO 177 174 ? ? ? A . n A 1 178 ILE 178 175 ? ? ? A . n B 1 1 SER 1 -2 -2 SER SER B . n B 1 2 ASN 2 -1 -1 ASN ASN B . n B 1 3 ALA 3 0 0 ALA ALA B . n B 1 4 LEU 4 1 1 LEU LEU B . n B 1 5 PHE 5 2 2 PHE PHE B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 SER 7 4 4 SER SER B . n B 1 8 ARG 8 5 5 ARG ARG B . n B 1 9 ASP 9 6 6 ASP ASP B . n B 1 10 ILE 10 7 7 ILE ILE B . n B 1 11 LEU 11 8 8 LEU LEU B . n B 1 12 GLU 12 9 9 GLU GLU B . n B 1 13 VAL 13 10 10 VAL VAL B . n B 1 14 LEU 14 11 11 LEU LEU B . n B 1 15 GLN 15 12 12 GLN GLN B . n B 1 16 ASP 16 13 13 ASP ASP B . n B 1 17 ILE 17 14 14 ILE ILE B . n B 1 18 HIS 18 15 15 HIS HIS B . n B 1 19 MSE 19 16 16 MSE MSE B . n B 1 20 GLU 20 17 17 GLU GLU B . n B 1 21 THR 21 18 18 THR THR B . n B 1 22 GLY 22 19 19 GLY GLY B . n B 1 23 GLU 23 20 20 GLU GLU B . n B 1 24 THR 24 21 21 THR THR B . n B 1 25 VAL 25 22 22 VAL VAL B . n B 1 26 ALA 26 23 23 ALA ALA B . n B 1 27 ILE 27 24 24 ILE ILE B . n B 1 28 ALA 28 25 25 ALA ALA B . n B 1 29 THR 29 26 26 THR THR B . n B 1 30 LYS 30 27 27 LYS LYS B . n B 1 31 ASN 31 28 28 ASN ASN B . n B 1 32 ASP 32 29 29 ASP ASP B . n B 1 33 ILE 33 30 30 ILE ILE B . n B 1 34 TYR 34 31 31 TYR TYR B . n B 1 35 LEU 35 32 32 LEU LEU B . n B 1 36 GLN 36 33 33 GLN GLN B . n B 1 37 TYR 37 34 34 TYR TYR B . n B 1 38 ILE 38 35 35 ILE ILE B . n B 1 39 GLN 39 36 36 GLN GLN B . n B 1 40 ILE 40 37 37 ILE ILE B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 GLU 42 39 39 GLU GLU B . n B 1 43 SER 43 40 40 SER SER B . n B 1 44 VAL 44 41 41 VAL VAL B . n B 1 45 HIS 45 42 42 HIS HIS B . n B 1 46 ALA 46 43 43 ALA ALA B . n B 1 47 LEU 47 44 44 LEU LEU B . n B 1 48 ARG 48 45 45 ARG ARG B . n B 1 49 PHE 49 46 46 PHE PHE B . n B 1 50 HIS 50 47 47 HIS HIS B . n B 1 51 VAL 51 48 48 VAL VAL B . n B 1 52 ASP 52 49 49 ASP ASP B . n B 1 53 GLU 53 50 50 GLU GLU B . n B 1 54 ASN 54 51 51 ASN ASN B . n B 1 55 ALA 55 52 52 ALA ALA B . n B 1 56 ILE 56 53 53 ILE ILE B . n B 1 57 ARG 57 54 54 ARG ARG B . n B 1 58 PRO 58 55 55 PRO PRO B . n B 1 59 LEU 59 56 56 LEU LEU B . n B 1 60 THR 60 57 57 THR THR B . n B 1 61 MSE 61 58 58 MSE MSE B . n B 1 62 SER 62 59 59 SER SER B . n B 1 63 SER 63 60 60 SER SER B . n B 1 64 ASN 64 61 61 ASN ASN B . n B 1 65 GLY 65 62 62 GLY GLY B . n B 1 66 TRP 66 63 63 TRP TRP B . n B 1 67 MSE 67 64 64 MSE MSE B . n B 1 68 LEU 68 65 65 LEU LEU B . n B 1 69 MSE 69 66 66 MSE MSE B . n B 1 70 SER 70 67 67 SER SER B . n B 1 71 THR 71 68 68 THR THR B . n B 1 72 MSE 72 69 69 MSE MSE B . n B 1 73 ASN 73 70 70 ASN ASN B . n B 1 74 ASP 74 71 71 ASP ASP B . n B 1 75 LYS 75 72 72 LYS LYS B . n B 1 76 ALA 76 73 73 ALA ALA B . n B 1 77 ILE 77 74 74 ILE ILE B . n B 1 78 ASP 78 75 75 ASP ASP B . n B 1 79 ASN 79 76 76 ASN ASN B . n B 1 80 THR 80 77 77 THR THR B . n B 1 81 VAL 81 78 78 VAL VAL B . n B 1 82 ARG 82 79 79 ARG ARG B . n B 1 83 ARG 83 80 80 ARG ARG B . n B 1 84 ALA 84 81 81 ALA ALA B . n B 1 85 ASN 85 82 82 ASN ASN B . n B 1 86 THR 86 83 83 THR THR B . n B 1 87 ILE 87 84 84 ILE ILE B . n B 1 88 THR 88 85 85 THR THR B . n B 1 89 GLN 89 86 86 GLN GLN B . n B 1 90 LYS 90 87 87 LYS LYS B . n B 1 91 ASP 91 88 88 ASP ASP B . n B 1 92 GLY 92 89 89 GLY GLY B . n B 1 93 ILE 93 90 90 ILE ILE B . n B 1 94 ARG 94 91 91 ARG ARG B . n B 1 95 PHE 95 92 92 PHE PHE B . n B 1 96 GLU 96 93 93 GLU GLU B . n B 1 97 VAL 97 94 94 VAL VAL B . n B 1 98 ASP 98 95 95 ASP ASP B . n B 1 99 ASP 99 96 96 ASP ASP B . n B 1 100 MSE 100 97 97 MSE MSE B . n B 1 101 MSE 101 98 98 MSE MSE B . n B 1 102 ALA 102 99 99 ALA ALA B . n B 1 103 ARG 103 100 100 ARG ARG B . n B 1 104 ILE 104 101 101 ILE ILE B . n B 1 105 ARG 105 102 102 ARG ARG B . n B 1 106 GLN 106 103 103 GLN GLN B . n B 1 107 VAL 107 104 104 VAL VAL B . n B 1 108 ARG 108 105 105 ARG ARG B . n B 1 109 GLU 109 106 106 GLU GLU B . n B 1 110 GLN 110 107 107 GLN GLN B . n B 1 111 GLY 111 108 108 GLY GLY B . n B 1 112 TYR 112 109 109 TYR TYR B . n B 1 113 ALA 113 110 110 ALA ALA B . n B 1 114 SER 114 111 111 SER SER B . n B 1 115 ALA 115 112 112 ALA ALA B . n B 1 116 GLU 116 113 113 GLU GLU B . n B 1 117 HIS 117 114 114 HIS HIS B . n B 1 118 ILE 118 115 115 ILE ILE B . n B 1 119 PRO 119 116 116 PRO PRO B . n B 1 120 PHE 120 117 117 PHE PHE B . n B 1 121 VAL 121 118 118 VAL VAL B . n B 1 122 GLY 122 119 119 GLY GLY B . n B 1 123 GLY 123 120 120 GLY GLY B . n B 1 124 GLY 124 121 121 GLY GLY B . n B 1 125 THR 125 122 122 THR THR B . n B 1 126 ILE 126 123 123 ILE ILE B . n B 1 127 CYS 127 124 124 CYS CYS B . n B 1 128 VAL 128 125 125 VAL VAL B . n B 1 129 LEU 129 126 126 LEU LEU B . n B 1 130 LEU 130 127 127 LEU LEU B . n B 1 131 PRO 131 128 128 PRO PRO B . n B 1 132 MSE 132 129 129 MSE MSE B . n B 1 133 THR 133 130 130 THR THR B . n B 1 134 ILE 134 131 131 ILE ILE B . n B 1 135 GLN 135 132 132 GLN GLN B . n B 1 136 GLY 136 133 133 GLY GLY B . n B 1 137 GLN 137 134 134 GLN GLN B . n B 1 138 PRO 138 135 135 PRO PRO B . n B 1 139 VAL 139 136 136 VAL VAL B . n B 1 140 THR 140 137 137 THR THR B . n B 1 141 MSE 141 138 138 MSE MSE B . n B 1 142 GLY 142 139 139 GLY GLY B . n B 1 143 LEU 143 140 140 LEU LEU B . n B 1 144 GLY 144 141 141 GLY GLY B . n B 1 145 GLY 145 142 142 GLY GLY B . n B 1 146 ALA 146 143 143 ALA ALA B . n B 1 147 LEU 147 144 144 LEU LEU B . n B 1 148 ASP 148 145 145 ASP ASP B . n B 1 149 ARG 149 146 146 ARG ARG B . n B 1 150 ILE 150 147 147 ILE ILE B . n B 1 151 LYS 151 148 148 LYS LYS B . n B 1 152 GLN 152 149 149 GLN GLN B . n B 1 153 ASN 153 150 150 ASN ASN B . n B 1 154 TYR 154 151 151 TYR TYR B . n B 1 155 ASP 155 152 152 ASP ASP B . n B 1 156 ARG 156 153 153 ARG ARG B . n B 1 157 TYR 157 154 154 TYR TYR B . n B 1 158 LEU 158 155 155 LEU LEU B . n B 1 159 GLU 159 156 156 GLU GLU B . n B 1 160 LEU 160 157 157 LEU LEU B . n B 1 161 LEU 161 158 158 LEU LEU B . n B 1 162 LEU 162 159 159 LEU LEU B . n B 1 163 ASN 163 160 160 ASN ASN B . n B 1 164 GLY 164 161 161 GLY GLY B . n B 1 165 VAL 165 162 162 VAL VAL B . n B 1 166 GLN 166 163 163 GLN GLN B . n B 1 167 GLN 167 164 164 GLN GLN B . n B 1 168 LEU 168 165 165 LEU LEU B . n B 1 169 LYS 169 166 166 LYS LYS B . n B 1 170 LYS 170 167 167 LYS LYS B . n B 1 171 SER 171 168 168 SER SER B . n B 1 172 ASP 172 169 169 ASP ASP B . n B 1 173 SER 173 170 ? ? ? B . n B 1 174 PHE 174 171 ? ? ? B . n B 1 175 HIS 175 172 ? ? ? B . n B 1 176 GLN 176 173 ? ? ? B . n B 1 177 PRO 177 174 ? ? ? B . n B 1 178 ILE 178 175 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 19 A MSE 16 ? MET SELENOMETHIONINE 2 A MSE 61 A MSE 58 ? MET SELENOMETHIONINE 3 A MSE 67 A MSE 64 ? MET SELENOMETHIONINE 4 A MSE 69 A MSE 66 ? MET SELENOMETHIONINE 5 A MSE 72 A MSE 69 ? MET SELENOMETHIONINE 6 A MSE 100 A MSE 97 ? MET SELENOMETHIONINE 7 A MSE 101 A MSE 98 ? MET SELENOMETHIONINE 8 A MSE 132 A MSE 129 ? MET SELENOMETHIONINE 9 A MSE 141 A MSE 138 ? MET SELENOMETHIONINE 10 B MSE 19 B MSE 16 ? MET SELENOMETHIONINE 11 B MSE 61 B MSE 58 ? MET SELENOMETHIONINE 12 B MSE 67 B MSE 64 ? MET SELENOMETHIONINE 13 B MSE 69 B MSE 66 ? MET SELENOMETHIONINE 14 B MSE 72 B MSE 69 ? MET SELENOMETHIONINE 15 B MSE 100 B MSE 97 ? MET SELENOMETHIONINE 16 B MSE 101 B MSE 98 ? MET SELENOMETHIONINE 17 B MSE 132 B MSE 129 ? MET SELENOMETHIONINE 18 B MSE 141 B MSE 138 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,I 2 1 B,E,F,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 33.2734 36.1797 75.5819 -0.2629 -0.2207 -0.3488 -0.0014 -0.0544 -0.0284 4.1406 3.6367 2.3983 -1.1305 -1.2024 -0.1523 -0.1143 -0.6686 0.0456 0.2680 0.1214 -0.1057 0.0650 0.3368 -0.0071 'X-RAY DIFFRACTION' 2 ? refined 26.6914 49.7791 41.7982 -0.2570 -0.0952 -0.0885 0.0810 0.0658 0.1680 6.4198 3.0355 3.8624 0.5145 0.7886 -1.6378 0.1038 1.0213 1.0000 0.0729 -0.0701 0.0492 -0.3044 0.0907 -0.0337 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A -2 A 1 A 172 A 175 ? 'X-RAY DIFFRACTION' ? 2 2 B -2 B 1 B 169 B 172 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SBC-Collect 'data collection' . ? 2 HKL-3000 'data collection' . ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 HKL-3000 phasing . ? 6 SHELXD phasing . ? 7 MLPHARE phasing . ? 8 SOLVE phasing . ? 9 RESOLVE phasing . ? 10 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 181 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 221 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ B ARG 80 ? ? NH1 B ARG 80 ? ? 1.229 1.326 -0.097 0.013 N 2 1 C B GLY 89 ? ? N B ILE 90 ? ? 1.491 1.336 0.155 0.023 Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 80 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 80 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 80 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.90 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.40 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A -1 ? ? -146.89 18.42 2 1 ASP A 29 ? ? 58.58 -110.08 3 1 ARG A 91 ? ? -163.70 117.42 4 1 LYS A 166 ? ? -48.71 -12.55 5 1 LYS A 166 ? ? -48.71 -10.72 6 1 HIS A 172 ? ? -116.89 75.26 7 1 ASP B 29 ? ? 71.02 -105.88 8 1 SER B 40 ? ? -48.38 153.19 9 1 LYS B 87 ? ? -68.76 0.73 10 1 VAL B 94 ? ? -55.94 -82.31 11 1 LYS B 167 ? ? -97.51 57.63 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 174 ? A PRO 177 2 1 Y 1 A ILE 175 ? A ILE 178 3 1 Y 1 B SER 170 ? B SER 173 4 1 Y 1 B PHE 171 ? B PHE 174 5 1 Y 1 B HIS 172 ? B HIS 175 6 1 Y 1 B GLN 173 ? B GLN 176 7 1 Y 1 B PRO 174 ? B PRO 177 8 1 Y 1 B ILE 175 ? B ILE 178 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'AMMONIUM ION' NH4 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 176 1 SO4 SO4 A . D 2 SO4 1 177 2 SO4 SO4 A . E 2 SO4 1 176 3 SO4 SO4 B . F 2 SO4 1 177 4 SO4 SO4 B . G 2 SO4 1 178 5 SO4 SO4 B . H 3 NH4 1 179 6 NH4 NH4 B . I 4 HOH 1 178 2 HOH HOH A . I 4 HOH 2 179 3 HOH HOH A . I 4 HOH 3 180 5 HOH HOH A . I 4 HOH 4 181 6 HOH HOH A . I 4 HOH 5 182 7 HOH HOH A . I 4 HOH 6 183 9 HOH HOH A . I 4 HOH 7 184 11 HOH HOH A . I 4 HOH 8 185 13 HOH HOH A . I 4 HOH 9 186 15 HOH HOH A . I 4 HOH 10 187 17 HOH HOH A . I 4 HOH 11 188 28 HOH HOH A . I 4 HOH 12 189 33 HOH HOH A . I 4 HOH 13 190 34 HOH HOH A . I 4 HOH 14 191 35 HOH HOH A . I 4 HOH 15 192 37 HOH HOH A . I 4 HOH 16 193 38 HOH HOH A . I 4 HOH 17 194 40 HOH HOH A . I 4 HOH 18 195 41 HOH HOH A . I 4 HOH 19 196 42 HOH HOH A . I 4 HOH 20 197 43 HOH HOH A . I 4 HOH 21 198 44 HOH HOH A . I 4 HOH 22 199 46 HOH HOH A . I 4 HOH 23 200 47 HOH HOH A . I 4 HOH 24 201 48 HOH HOH A . I 4 HOH 25 202 50 HOH HOH A . I 4 HOH 26 203 53 HOH HOH A . I 4 HOH 27 204 56 HOH HOH A . I 4 HOH 28 205 60 HOH HOH A . I 4 HOH 29 206 63 HOH HOH A . I 4 HOH 30 207 66 HOH HOH A . I 4 HOH 31 208 67 HOH HOH A . I 4 HOH 32 209 73 HOH HOH A . I 4 HOH 33 210 80 HOH HOH A . I 4 HOH 34 211 81 HOH HOH A . I 4 HOH 35 212 84 HOH HOH A . I 4 HOH 36 213 87 HOH HOH A . I 4 HOH 37 214 90 HOH HOH A . I 4 HOH 38 215 95 HOH HOH A . I 4 HOH 39 216 104 HOH HOH A . J 4 HOH 1 180 1 HOH HOH B . J 4 HOH 2 181 4 HOH HOH B . J 4 HOH 3 182 8 HOH HOH B . J 4 HOH 4 183 10 HOH HOH B . J 4 HOH 5 184 12 HOH HOH B . J 4 HOH 6 185 14 HOH HOH B . J 4 HOH 7 186 16 HOH HOH B . J 4 HOH 8 187 18 HOH HOH B . J 4 HOH 9 188 19 HOH HOH B . J 4 HOH 10 189 20 HOH HOH B . J 4 HOH 11 190 21 HOH HOH B . J 4 HOH 12 191 22 HOH HOH B . J 4 HOH 13 192 23 HOH HOH B . J 4 HOH 14 193 24 HOH HOH B . J 4 HOH 15 194 25 HOH HOH B . J 4 HOH 16 195 26 HOH HOH B . J 4 HOH 17 196 27 HOH HOH B . J 4 HOH 18 197 29 HOH HOH B . J 4 HOH 19 198 30 HOH HOH B . J 4 HOH 20 199 31 HOH HOH B . J 4 HOH 21 200 32 HOH HOH B . J 4 HOH 22 201 36 HOH HOH B . J 4 HOH 23 202 39 HOH HOH B . J 4 HOH 24 203 45 HOH HOH B . J 4 HOH 25 204 49 HOH HOH B . J 4 HOH 26 205 51 HOH HOH B . J 4 HOH 27 206 52 HOH HOH B . J 4 HOH 28 207 54 HOH HOH B . J 4 HOH 29 208 55 HOH HOH B . J 4 HOH 30 209 57 HOH HOH B . J 4 HOH 31 210 58 HOH HOH B . J 4 HOH 32 211 59 HOH HOH B . J 4 HOH 33 212 61 HOH HOH B . J 4 HOH 34 213 62 HOH HOH B . J 4 HOH 35 214 64 HOH HOH B . J 4 HOH 36 215 65 HOH HOH B . J 4 HOH 37 216 68 HOH HOH B . J 4 HOH 38 217 69 HOH HOH B . J 4 HOH 39 218 70 HOH HOH B . J 4 HOH 40 219 71 HOH HOH B . J 4 HOH 41 220 72 HOH HOH B . J 4 HOH 42 221 74 HOH HOH B . J 4 HOH 43 222 75 HOH HOH B . J 4 HOH 44 223 76 HOH HOH B . J 4 HOH 45 224 77 HOH HOH B . J 4 HOH 46 225 78 HOH HOH B . J 4 HOH 47 226 79 HOH HOH B . J 4 HOH 48 227 82 HOH HOH B . J 4 HOH 49 228 83 HOH HOH B . J 4 HOH 50 229 85 HOH HOH B . J 4 HOH 51 230 86 HOH HOH B . J 4 HOH 52 231 88 HOH HOH B . J 4 HOH 53 232 89 HOH HOH B . J 4 HOH 54 233 91 HOH HOH B . J 4 HOH 55 234 92 HOH HOH B . J 4 HOH 56 235 93 HOH HOH B . J 4 HOH 57 236 94 HOH HOH B . J 4 HOH 58 237 96 HOH HOH B . J 4 HOH 59 238 97 HOH HOH B . J 4 HOH 60 239 98 HOH HOH B . J 4 HOH 61 240 99 HOH HOH B . J 4 HOH 62 241 100 HOH HOH B . J 4 HOH 63 242 101 HOH HOH B . J 4 HOH 64 243 102 HOH HOH B . J 4 HOH 65 244 103 HOH HOH B . #