data_3DS4 # _entry.id 3DS4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DS4 pdb_00003ds4 10.2210/pdb3ds4/pdb RCSB RCSB048418 ? ? WWPDB D_1000048418 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DS2 'HIV-1 capsid C-terminal domain mutant (Y169A)' unspecified PDB 3DS3 'HIV-1 capsid C-terminal domain mutant (Y169A) in complex with an inhibitor of particle assembly (CAI)' unspecified PDB 3DTJ 'HIV-1 capsid C-terminal domain mutant (E187A)' unspecified PDB 3DS1 'HIV-1 capsid C-terminal domain mutant (E187A) in complex with an inhibitor of particle assembly (CAI)' unspecified PDB 3DS5 'HIV-1 capsid C-terminal domain mutant (N183A)' unspecified PDB 3DS0 'HIV-1 capsid C-terminal domain mutant (N183A) in complex with an inhibitor of particle assembly (CAI)' unspecified PDB 3DPH 'HIV-1 capsid C-terminal domain mutant (L211S)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DS4 _pdbx_database_status.recvd_initial_deposition_date 2008-07-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Igonet, S.' 1 'Vaney, M.C.' 2 'Rey, F.A.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein. ; J.Biol.Chem. 283 32024 32033 2008 JBCHA3 US 0021-9258 0071 ? 18772135 10.1074/jbc.M804230200 1 'The HIV-1 capsid protein C-terminal domain in complex with a virus assembly inhibitor' Nat.Struct.Mol.Biol. 12 678 682 2005 ? US 1545-9993 ? ? 16041386 10.1038/nsmb967 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bartonova, V.' 1 ? primary 'Igonet, S.' 2 ? primary 'Sticht, J.' 3 ? primary 'Glass, B.' 4 ? primary 'Habermann, A.' 5 ? primary 'Vaney, M.C.' 6 ? primary 'Sehr, P.' 7 ? primary 'Lewis, J.' 8 ? primary 'Rey, F.A.' 9 ? primary 'Krausslich, H.G.' 10 ? 1 'Ternois, F.' 11 ? 1 'Sticht, J.' 12 ? 1 'Duquerroy, S.' 13 ? 1 'Krausslich, H.-G.' 14 ? 1 'Rey, F.A.' 15 ? # _cell.entry_id 3DS4 _cell.length_a 31.510 _cell.length_b 69.270 _cell.length_c 41.550 _cell.angle_alpha 90.00 _cell.angle_beta 97.66 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DS4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 CAPSID PROTEIN' 9504.841 2 ? L211S 'C-terminal domain, UNP residues 278-363' ? 2 polymer syn 'Peptide inhibitor of capsid assembly' 1445.570 1 ? ? ? ? 3 water nat water 18.015 321 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATSEEMMTACQGVGGPG HKARVL ; ;SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATSEEMMTACQGVGGPG HKARVL ; A,B ? 2 'polypeptide(L)' no no ITFEDLLDYYGP ITFEDLLDYYGP T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 THR n 1 4 SER n 1 5 ILE n 1 6 LEU n 1 7 ASP n 1 8 ILE n 1 9 ARG n 1 10 GLN n 1 11 GLY n 1 12 PRO n 1 13 LYS n 1 14 GLU n 1 15 PRO n 1 16 PHE n 1 17 ARG n 1 18 ASP n 1 19 TYR n 1 20 VAL n 1 21 ASP n 1 22 ARG n 1 23 PHE n 1 24 TYR n 1 25 LYS n 1 26 THR n 1 27 LEU n 1 28 ARG n 1 29 ALA n 1 30 GLU n 1 31 GLN n 1 32 ALA n 1 33 SER n 1 34 GLN n 1 35 GLU n 1 36 VAL n 1 37 LYS n 1 38 ASN n 1 39 TRP n 1 40 MET n 1 41 THR n 1 42 GLU n 1 43 THR n 1 44 LEU n 1 45 LEU n 1 46 VAL n 1 47 GLN n 1 48 ASN n 1 49 ALA n 1 50 ASN n 1 51 PRO n 1 52 ASP n 1 53 CYS n 1 54 LYS n 1 55 THR n 1 56 ILE n 1 57 LEU n 1 58 LYS n 1 59 ALA n 1 60 LEU n 1 61 GLY n 1 62 PRO n 1 63 GLY n 1 64 ALA n 1 65 THR n 1 66 SER n 1 67 GLU n 1 68 GLU n 1 69 MET n 1 70 MET n 1 71 THR n 1 72 ALA n 1 73 CYS n 1 74 GLN n 1 75 GLY n 1 76 VAL n 1 77 GLY n 1 78 GLY n 1 79 PRO n 1 80 GLY n 1 81 HIS n 1 82 LYS n 1 83 ALA n 1 84 ARG n 1 85 VAL n 1 86 LEU n 2 1 ILE n 2 2 THR n 2 3 PHE n 2 4 GLU n 2 5 ASP n 2 6 LEU n 2 7 LEU n 2 8 ASP n 2 9 TYR n 2 10 TYR n 2 11 GLY n 2 12 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NL4-3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11698 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)codonplus RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11c _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'CAI peptide was obtained as lyophilized trifluoroacetic acid salts.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP Q72497_9HIV1 1 ;SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPG HKARVL ; 278 Q72497 ? 2 PDB 3DS4 2 ITFEDLLDYYGP 1 3DS4 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DS4 A 1 ? 86 ? Q72497 278 ? 363 ? 146 231 2 1 3DS4 B 1 ? 86 ? Q72497 278 ? 363 ? 146 231 3 2 3DS4 T 1 ? 12 ? 3DS4 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DS4 SER A 66 ? UNP Q72497 LEU 343 'engineered mutation' 211 1 2 3DS4 SER B 66 ? UNP Q72497 LEU 343 'engineered mutation' 211 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DS4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PEG4000, 200mM ammonium sulfate, EVAPORATION, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-03-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0080 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0080 # _reflns.entry_id 3DS4 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 41.2 _reflns.d_resolution_high 1.12 _reflns.number_obs 63254 _reflns.number_all ? _reflns.percent_possible_obs 93.2 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.12 _reflns_shell.d_res_low 1.19 _reflns_shell.percent_possible_all 73.3 _reflns_shell.Rmerge_I_obs 0.41 _reflns_shell.pdbx_Rsym_value 0.41 _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DS4 _refine.ls_number_reflns_obs 62969 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.40 _refine.ls_d_res_high 1.12 _refine.ls_percent_reflns_obs 95.84 _refine.ls_R_factor_obs 0.20907 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20827 _refine.ls_R_factor_R_free 0.23412 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.1 _refine.ls_number_reflns_R_free 2022 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.B_iso_mean 17.054 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2BUO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.044 _refine.pdbx_overall_ESU_R_Free 0.043 _refine.overall_SU_ML 0.032 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.500 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1303 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 321 _refine_hist.number_atoms_total 1624 _refine_hist.d_res_high 1.12 _refine_hist.d_res_low 35.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1327 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.072 1.980 ? 1795 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.238 5.000 ? 165 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.830 24.677 ? 62 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.544 15.000 ? 237 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.197 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.070 0.200 ? 196 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1013 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.191 0.200 ? 713 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 940 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.118 0.200 ? 264 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.168 0.200 ? 61 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.109 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.923 1.500 ? 850 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.364 2.000 ? 1335 'X-RAY DIFFRACTION' ? r_scbond_it 2.256 3.000 ? 541 'X-RAY DIFFRACTION' ? r_scangle_it 2.650 4.500 ? 460 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.994 3.000 ? 1391 'X-RAY DIFFRACTION' ? r_sphericity_free 2.490 3.000 ? 326 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2.135 3.000 ? 1303 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.120 _refine_ls_shell.d_res_low 1.149 _refine_ls_shell.number_reflns_R_work 3416 _refine_ls_shell.R_factor_R_work 0.317 _refine_ls_shell.percent_reflns_obs 70.68 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 111 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DS4 _struct.title 'HIV-1 capsid C-terminal domain mutant (L211S) in complex with an inhibitor of particle assembly (CAI)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DS4 _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'HIV, capsid, mutant, inhibitor, assembly, polyprotein, complex(viral protein-peptide), mainly alpha, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? ILE A 8 ? SER A 149 ILE A 153 5 ? 5 HELX_P HELX_P2 2 PRO A 15 ? GLU A 30 ? PRO A 160 GLU A 175 1 ? 16 HELX_P HELX_P3 3 SER A 33 ? ASN A 48 ? SER A 178 ASN A 193 1 ? 16 HELX_P HELX_P4 4 ASN A 50 ? GLY A 61 ? ASN A 195 GLY A 206 1 ? 12 HELX_P HELX_P5 5 THR A 65 ? GLN A 74 ? THR A 210 GLN A 219 1 ? 10 HELX_P HELX_P6 6 PRO B 15 ? GLU B 30 ? PRO B 160 GLU B 175 1 ? 16 HELX_P HELX_P7 7 SER B 33 ? THR B 43 ? SER B 178 THR B 188 1 ? 11 HELX_P HELX_P8 8 THR B 43 ? ASN B 48 ? THR B 188 ASN B 193 1 ? 6 HELX_P HELX_P9 9 ASN B 50 ? GLY B 61 ? ASN B 195 GLY B 206 1 ? 12 HELX_P HELX_P10 10 THR B 65 ? GLN B 74 ? THR B 210 GLN B 219 1 ? 10 HELX_P HELX_P11 11 THR C 2 ? GLY C 11 ? THR T 2 GLY T 11 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 3DS4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DS4 _atom_sites.fract_transf_matrix[1][1] 0.031736 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004268 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014436 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024284 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 146 ? ? ? A . n A 1 2 PRO 2 147 ? ? ? A . n A 1 3 THR 3 148 148 THR THR A . n A 1 4 SER 4 149 149 SER SER A . n A 1 5 ILE 5 150 150 ILE ILE A . n A 1 6 LEU 6 151 151 LEU LEU A . n A 1 7 ASP 7 152 152 ASP ASP A . n A 1 8 ILE 8 153 153 ILE ILE A . n A 1 9 ARG 9 154 154 ARG ARG A . n A 1 10 GLN 10 155 155 GLN GLN A . n A 1 11 GLY 11 156 156 GLY GLY A . n A 1 12 PRO 12 157 157 PRO PRO A . n A 1 13 LYS 13 158 158 LYS LYS A . n A 1 14 GLU 14 159 159 GLU GLU A . n A 1 15 PRO 15 160 160 PRO PRO A . n A 1 16 PHE 16 161 161 PHE PHE A . n A 1 17 ARG 17 162 162 ARG ARG A . n A 1 18 ASP 18 163 163 ASP ASP A . n A 1 19 TYR 19 164 164 TYR TYR A . n A 1 20 VAL 20 165 165 VAL VAL A . n A 1 21 ASP 21 166 166 ASP ASP A . n A 1 22 ARG 22 167 167 ARG ARG A . n A 1 23 PHE 23 168 168 PHE PHE A . n A 1 24 TYR 24 169 169 TYR TYR A . n A 1 25 LYS 25 170 170 LYS LYS A . n A 1 26 THR 26 171 171 THR THR A . n A 1 27 LEU 27 172 172 LEU LEU A . n A 1 28 ARG 28 173 173 ARG ARG A . n A 1 29 ALA 29 174 174 ALA ALA A . n A 1 30 GLU 30 175 175 GLU GLU A . n A 1 31 GLN 31 176 176 GLN GLN A . n A 1 32 ALA 32 177 177 ALA ALA A . n A 1 33 SER 33 178 178 SER SER A . n A 1 34 GLN 34 179 179 GLN GLN A . n A 1 35 GLU 35 180 180 GLU GLU A . n A 1 36 VAL 36 181 181 VAL VAL A . n A 1 37 LYS 37 182 182 LYS LYS A . n A 1 38 ASN 38 183 183 ASN ASN A . n A 1 39 TRP 39 184 184 TRP TRP A . n A 1 40 MET 40 185 185 MET MET A . n A 1 41 THR 41 186 186 THR THR A . n A 1 42 GLU 42 187 187 GLU GLU A . n A 1 43 THR 43 188 188 THR THR A . n A 1 44 LEU 44 189 189 LEU LEU A . n A 1 45 LEU 45 190 190 LEU LEU A . n A 1 46 VAL 46 191 191 VAL VAL A . n A 1 47 GLN 47 192 192 GLN GLN A . n A 1 48 ASN 48 193 193 ASN ASN A . n A 1 49 ALA 49 194 194 ALA ALA A . n A 1 50 ASN 50 195 195 ASN ASN A . n A 1 51 PRO 51 196 196 PRO PRO A . n A 1 52 ASP 52 197 197 ASP ASP A . n A 1 53 CYS 53 198 198 CYS CYS A . n A 1 54 LYS 54 199 199 LYS LYS A . n A 1 55 THR 55 200 200 THR THR A . n A 1 56 ILE 56 201 201 ILE ILE A . n A 1 57 LEU 57 202 202 LEU LEU A . n A 1 58 LYS 58 203 203 LYS LYS A . n A 1 59 ALA 59 204 204 ALA ALA A . n A 1 60 LEU 60 205 205 LEU LEU A . n A 1 61 GLY 61 206 206 GLY GLY A . n A 1 62 PRO 62 207 207 PRO PRO A . n A 1 63 GLY 63 208 208 GLY GLY A . n A 1 64 ALA 64 209 209 ALA ALA A . n A 1 65 THR 65 210 210 THR THR A . n A 1 66 SER 66 211 211 SER SER A . n A 1 67 GLU 67 212 212 GLU GLU A . n A 1 68 GLU 68 213 213 GLU GLU A . n A 1 69 MET 69 214 214 MET MET A . n A 1 70 MET 70 215 215 MET MET A . n A 1 71 THR 71 216 216 THR THR A . n A 1 72 ALA 72 217 217 ALA ALA A . n A 1 73 CYS 73 218 218 CYS CYS A . n A 1 74 GLN 74 219 219 GLN GLN A . n A 1 75 GLY 75 220 220 GLY GLY A . n A 1 76 VAL 76 221 221 VAL VAL A . n A 1 77 GLY 77 222 222 GLY GLY A . n A 1 78 GLY 78 223 223 GLY GLY A . n A 1 79 PRO 79 224 224 PRO PRO A . n A 1 80 GLY 80 225 ? ? ? A . n A 1 81 HIS 81 226 ? ? ? A . n A 1 82 LYS 82 227 ? ? ? A . n A 1 83 ALA 83 228 ? ? ? A . n A 1 84 ARG 84 229 ? ? ? A . n A 1 85 VAL 85 230 ? ? ? A . n A 1 86 LEU 86 231 ? ? ? A . n B 1 1 SER 1 146 ? ? ? B . n B 1 2 PRO 2 147 ? ? ? B . n B 1 3 THR 3 148 ? ? ? B . n B 1 4 SER 4 149 149 SER SER B . n B 1 5 ILE 5 150 150 ILE ILE B . n B 1 6 LEU 6 151 151 LEU LEU B . n B 1 7 ASP 7 152 152 ASP ASP B . n B 1 8 ILE 8 153 153 ILE ILE B . n B 1 9 ARG 9 154 154 ARG ARG B . n B 1 10 GLN 10 155 155 GLN GLN B . n B 1 11 GLY 11 156 156 GLY GLY B . n B 1 12 PRO 12 157 157 PRO PRO B . n B 1 13 LYS 13 158 158 LYS LYS B . n B 1 14 GLU 14 159 159 GLU GLU B . n B 1 15 PRO 15 160 160 PRO PRO B . n B 1 16 PHE 16 161 161 PHE PHE B . n B 1 17 ARG 17 162 162 ARG ARG B . n B 1 18 ASP 18 163 163 ASP ASP B . n B 1 19 TYR 19 164 164 TYR TYR B . n B 1 20 VAL 20 165 165 VAL VAL B . n B 1 21 ASP 21 166 166 ASP ASP B . n B 1 22 ARG 22 167 167 ARG ARG B . n B 1 23 PHE 23 168 168 PHE PHE B . n B 1 24 TYR 24 169 169 TYR TYR B . n B 1 25 LYS 25 170 170 LYS LYS B . n B 1 26 THR 26 171 171 THR THR B . n B 1 27 LEU 27 172 172 LEU LEU B . n B 1 28 ARG 28 173 173 ARG ARG B . n B 1 29 ALA 29 174 174 ALA ALA B . n B 1 30 GLU 30 175 175 GLU GLU B . n B 1 31 GLN 31 176 176 GLN GLN B . n B 1 32 ALA 32 177 177 ALA ALA B . n B 1 33 SER 33 178 178 SER SER B . n B 1 34 GLN 34 179 179 GLN GLN B . n B 1 35 GLU 35 180 180 GLU GLU B . n B 1 36 VAL 36 181 181 VAL VAL B . n B 1 37 LYS 37 182 182 LYS LYS B . n B 1 38 ASN 38 183 183 ASN ASN B . n B 1 39 TRP 39 184 184 TRP TRP B . n B 1 40 MET 40 185 185 MET MET B . n B 1 41 THR 41 186 186 THR THR B . n B 1 42 GLU 42 187 187 GLU GLU B . n B 1 43 THR 43 188 188 THR THR B . n B 1 44 LEU 44 189 189 LEU LEU B . n B 1 45 LEU 45 190 190 LEU LEU B . n B 1 46 VAL 46 191 191 VAL VAL B . n B 1 47 GLN 47 192 192 GLN GLN B . n B 1 48 ASN 48 193 193 ASN ASN B . n B 1 49 ALA 49 194 194 ALA ALA B . n B 1 50 ASN 50 195 195 ASN ASN B . n B 1 51 PRO 51 196 196 PRO PRO B . n B 1 52 ASP 52 197 197 ASP ASP B . n B 1 53 CYS 53 198 198 CYS CYS B . n B 1 54 LYS 54 199 199 LYS LYS B . n B 1 55 THR 55 200 200 THR THR B . n B 1 56 ILE 56 201 201 ILE ILE B . n B 1 57 LEU 57 202 202 LEU LEU B . n B 1 58 LYS 58 203 203 LYS LYS B . n B 1 59 ALA 59 204 204 ALA ALA B . n B 1 60 LEU 60 205 205 LEU LEU B . n B 1 61 GLY 61 206 206 GLY GLY B . n B 1 62 PRO 62 207 207 PRO PRO B . n B 1 63 GLY 63 208 208 GLY GLY B . n B 1 64 ALA 64 209 209 ALA ALA B . n B 1 65 THR 65 210 210 THR THR B . n B 1 66 SER 66 211 211 SER SER B . n B 1 67 GLU 67 212 212 GLU GLU B . n B 1 68 GLU 68 213 213 GLU GLU B . n B 1 69 MET 69 214 214 MET MET B . n B 1 70 MET 70 215 215 MET MET B . n B 1 71 THR 71 216 216 THR THR B . n B 1 72 ALA 72 217 217 ALA ALA B . n B 1 73 CYS 73 218 218 CYS CYS B . n B 1 74 GLN 74 219 219 GLN GLN B . n B 1 75 GLY 75 220 220 GLY GLY B . n B 1 76 VAL 76 221 221 VAL VAL B . n B 1 77 GLY 77 222 222 GLY GLY B . n B 1 78 GLY 78 223 223 GLY GLY B . n B 1 79 PRO 79 224 ? ? ? B . n B 1 80 GLY 80 225 ? ? ? B . n B 1 81 HIS 81 226 ? ? ? B . n B 1 82 LYS 82 227 ? ? ? B . n B 1 83 ALA 83 228 ? ? ? B . n B 1 84 ARG 84 229 ? ? ? B . n B 1 85 VAL 85 230 ? ? ? B . n B 1 86 LEU 86 231 ? ? ? B . n C 2 1 ILE 1 1 1 ILE ILE T . n C 2 2 THR 2 2 2 THR THR T . n C 2 3 PHE 3 3 3 PHE PHE T . n C 2 4 GLU 4 4 4 GLU GLU T . n C 2 5 ASP 5 5 5 ASP ASP T . n C 2 6 LEU 6 6 6 LEU LEU T . n C 2 7 LEU 7 7 7 LEU LEU T . n C 2 8 ASP 8 8 8 ASP ASP T . n C 2 9 TYR 9 9 9 TYR TYR T . n C 2 10 TYR 10 10 10 TYR TYR T . n C 2 11 GLY 11 11 11 GLY GLY T . n C 2 12 PRO 12 12 12 PRO PRO T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 232 2 HOH HOH A . D 3 HOH 2 233 3 HOH HOH A . D 3 HOH 3 234 8 HOH HOH A . D 3 HOH 4 235 11 HOH HOH A . D 3 HOH 5 236 12 HOH HOH A . D 3 HOH 6 237 13 HOH HOH A . D 3 HOH 7 238 14 HOH HOH A . D 3 HOH 8 239 17 HOH HOH A . D 3 HOH 9 240 19 HOH HOH A . D 3 HOH 10 241 20 HOH HOH A . D 3 HOH 11 242 22 HOH HOH A . D 3 HOH 12 243 24 HOH HOH A . D 3 HOH 13 244 25 HOH HOH A . D 3 HOH 14 245 27 HOH HOH A . D 3 HOH 15 246 31 HOH HOH A . D 3 HOH 16 247 34 HOH HOH A . D 3 HOH 17 248 38 HOH HOH A . D 3 HOH 18 249 40 HOH HOH A . D 3 HOH 19 250 42 HOH HOH A . D 3 HOH 20 251 46 HOH HOH A . D 3 HOH 21 252 47 HOH HOH A . D 3 HOH 22 253 48 HOH HOH A . D 3 HOH 23 254 49 HOH HOH A . D 3 HOH 24 255 53 HOH HOH A . D 3 HOH 25 256 54 HOH HOH A . D 3 HOH 26 257 55 HOH HOH A . D 3 HOH 27 258 56 HOH HOH A . D 3 HOH 28 259 60 HOH HOH A . D 3 HOH 29 260 62 HOH HOH A . D 3 HOH 30 261 65 HOH HOH A . D 3 HOH 31 262 68 HOH HOH A . D 3 HOH 32 263 71 HOH HOH A . D 3 HOH 33 264 74 HOH HOH A . D 3 HOH 34 265 75 HOH HOH A . D 3 HOH 35 266 76 HOH HOH A . D 3 HOH 36 267 82 HOH HOH A . D 3 HOH 37 268 83 HOH HOH A . D 3 HOH 38 269 84 HOH HOH A . D 3 HOH 39 270 87 HOH HOH A . D 3 HOH 40 271 88 HOH HOH A . D 3 HOH 41 272 89 HOH HOH A . D 3 HOH 42 273 90 HOH HOH A . D 3 HOH 43 274 91 HOH HOH A . D 3 HOH 44 275 94 HOH HOH A . D 3 HOH 45 276 97 HOH HOH A . D 3 HOH 46 277 98 HOH HOH A . D 3 HOH 47 278 99 HOH HOH A . D 3 HOH 48 279 103 HOH HOH A . D 3 HOH 49 280 104 HOH HOH A . D 3 HOH 50 281 106 HOH HOH A . D 3 HOH 51 282 107 HOH HOH A . D 3 HOH 52 283 108 HOH HOH A . D 3 HOH 53 284 110 HOH HOH A . D 3 HOH 54 285 117 HOH HOH A . D 3 HOH 55 286 118 HOH HOH A . D 3 HOH 56 287 121 HOH HOH A . D 3 HOH 57 288 124 HOH HOH A . D 3 HOH 58 289 125 HOH HOH A . D 3 HOH 59 290 130 HOH HOH A . D 3 HOH 60 291 131 HOH HOH A . D 3 HOH 61 292 132 HOH HOH A . D 3 HOH 62 293 136 HOH HOH A . D 3 HOH 63 294 137 HOH HOH A . D 3 HOH 64 295 141 HOH HOH A . D 3 HOH 65 296 144 HOH HOH A . D 3 HOH 66 297 145 HOH HOH A . D 3 HOH 67 298 146 HOH HOH A . D 3 HOH 68 299 147 HOH HOH A . D 3 HOH 69 300 148 HOH HOH A . D 3 HOH 70 301 149 HOH HOH A . D 3 HOH 71 302 151 HOH HOH A . D 3 HOH 72 303 154 HOH HOH A . D 3 HOH 73 304 155 HOH HOH A . D 3 HOH 74 305 157 HOH HOH A . D 3 HOH 75 306 162 HOH HOH A . D 3 HOH 76 307 166 HOH HOH A . D 3 HOH 77 308 167 HOH HOH A . D 3 HOH 78 309 169 HOH HOH A . D 3 HOH 79 310 171 HOH HOH A . D 3 HOH 80 311 172 HOH HOH A . D 3 HOH 81 312 173 HOH HOH A . D 3 HOH 82 313 175 HOH HOH A . D 3 HOH 83 314 181 HOH HOH A . D 3 HOH 84 315 184 HOH HOH A . D 3 HOH 85 316 185 HOH HOH A . D 3 HOH 86 317 188 HOH HOH A . D 3 HOH 87 318 190 HOH HOH A . D 3 HOH 88 319 193 HOH HOH A . D 3 HOH 89 320 194 HOH HOH A . D 3 HOH 90 321 195 HOH HOH A . D 3 HOH 91 322 196 HOH HOH A . D 3 HOH 92 323 197 HOH HOH A . D 3 HOH 93 324 203 HOH HOH A . D 3 HOH 94 325 205 HOH HOH A . D 3 HOH 95 326 207 HOH HOH A . D 3 HOH 96 327 208 HOH HOH A . D 3 HOH 97 328 210 HOH HOH A . D 3 HOH 98 329 211 HOH HOH A . D 3 HOH 99 330 212 HOH HOH A . D 3 HOH 100 331 213 HOH HOH A . D 3 HOH 101 332 216 HOH HOH A . D 3 HOH 102 333 217 HOH HOH A . D 3 HOH 103 334 218 HOH HOH A . D 3 HOH 104 335 219 HOH HOH A . D 3 HOH 105 336 222 HOH HOH A . D 3 HOH 106 337 223 HOH HOH A . D 3 HOH 107 338 224 HOH HOH A . D 3 HOH 108 339 225 HOH HOH A . D 3 HOH 109 340 226 HOH HOH A . D 3 HOH 110 341 227 HOH HOH A . D 3 HOH 111 342 231 HOH HOH A . D 3 HOH 112 343 235 HOH HOH A . D 3 HOH 113 344 236 HOH HOH A . D 3 HOH 114 345 237 HOH HOH A . D 3 HOH 115 346 238 HOH HOH A . D 3 HOH 116 347 239 HOH HOH A . D 3 HOH 117 348 240 HOH HOH A . D 3 HOH 118 349 243 HOH HOH A . D 3 HOH 119 350 244 HOH HOH A . D 3 HOH 120 351 247 HOH HOH A . D 3 HOH 121 352 251 HOH HOH A . D 3 HOH 122 353 253 HOH HOH A . D 3 HOH 123 354 257 HOH HOH A . D 3 HOH 124 355 260 HOH HOH A . D 3 HOH 125 356 266 HOH HOH A . D 3 HOH 126 357 267 HOH HOH A . D 3 HOH 127 358 272 HOH HOH A . D 3 HOH 128 359 275 HOH HOH A . D 3 HOH 129 360 277 HOH HOH A . D 3 HOH 130 361 283 HOH HOH A . D 3 HOH 131 362 287 HOH HOH A . D 3 HOH 132 363 291 HOH HOH A . D 3 HOH 133 364 292 HOH HOH A . D 3 HOH 134 365 295 HOH HOH A . D 3 HOH 135 366 297 HOH HOH A . D 3 HOH 136 367 300 HOH HOH A . D 3 HOH 137 368 302 HOH HOH A . D 3 HOH 138 369 303 HOH HOH A . D 3 HOH 139 370 304 HOH HOH A . D 3 HOH 140 371 307 HOH HOH A . D 3 HOH 141 372 311 HOH HOH A . D 3 HOH 142 373 312 HOH HOH A . D 3 HOH 143 374 318 HOH HOH A . D 3 HOH 144 375 319 HOH HOH A . D 3 HOH 145 376 320 HOH HOH A . D 3 HOH 146 377 321 HOH HOH A . D 3 HOH 147 378 322 HOH HOH A . D 3 HOH 148 379 323 HOH HOH A . D 3 HOH 149 380 325 HOH HOH A . E 3 HOH 1 232 4 HOH HOH B . E 3 HOH 2 233 5 HOH HOH B . E 3 HOH 3 234 6 HOH HOH B . E 3 HOH 4 235 7 HOH HOH B . E 3 HOH 5 236 9 HOH HOH B . E 3 HOH 6 237 15 HOH HOH B . E 3 HOH 7 238 16 HOH HOH B . E 3 HOH 8 239 23 HOH HOH B . E 3 HOH 9 240 26 HOH HOH B . E 3 HOH 10 241 28 HOH HOH B . E 3 HOH 11 242 29 HOH HOH B . E 3 HOH 12 243 30 HOH HOH B . E 3 HOH 13 244 32 HOH HOH B . E 3 HOH 14 245 36 HOH HOH B . E 3 HOH 15 246 37 HOH HOH B . E 3 HOH 16 247 39 HOH HOH B . E 3 HOH 17 248 41 HOH HOH B . E 3 HOH 18 249 43 HOH HOH B . E 3 HOH 19 250 45 HOH HOH B . E 3 HOH 20 251 50 HOH HOH B . E 3 HOH 21 252 57 HOH HOH B . E 3 HOH 22 253 58 HOH HOH B . E 3 HOH 23 254 59 HOH HOH B . E 3 HOH 24 255 61 HOH HOH B . E 3 HOH 25 256 63 HOH HOH B . E 3 HOH 26 257 64 HOH HOH B . E 3 HOH 27 258 66 HOH HOH B . E 3 HOH 28 259 67 HOH HOH B . E 3 HOH 29 260 69 HOH HOH B . E 3 HOH 30 261 70 HOH HOH B . E 3 HOH 31 262 72 HOH HOH B . E 3 HOH 32 263 73 HOH HOH B . E 3 HOH 33 264 77 HOH HOH B . E 3 HOH 34 265 78 HOH HOH B . E 3 HOH 35 266 79 HOH HOH B . E 3 HOH 36 267 80 HOH HOH B . E 3 HOH 37 268 81 HOH HOH B . E 3 HOH 38 269 85 HOH HOH B . E 3 HOH 39 270 86 HOH HOH B . E 3 HOH 40 271 92 HOH HOH B . E 3 HOH 41 272 93 HOH HOH B . E 3 HOH 42 273 95 HOH HOH B . E 3 HOH 43 274 100 HOH HOH B . E 3 HOH 44 275 101 HOH HOH B . E 3 HOH 45 276 102 HOH HOH B . E 3 HOH 46 277 111 HOH HOH B . E 3 HOH 47 278 112 HOH HOH B . E 3 HOH 48 279 113 HOH HOH B . E 3 HOH 49 280 115 HOH HOH B . E 3 HOH 50 281 116 HOH HOH B . E 3 HOH 51 282 119 HOH HOH B . E 3 HOH 52 283 120 HOH HOH B . E 3 HOH 53 284 123 HOH HOH B . E 3 HOH 54 285 126 HOH HOH B . E 3 HOH 55 286 127 HOH HOH B . E 3 HOH 56 287 128 HOH HOH B . E 3 HOH 57 288 133 HOH HOH B . E 3 HOH 58 289 135 HOH HOH B . E 3 HOH 59 290 138 HOH HOH B . E 3 HOH 60 291 139 HOH HOH B . E 3 HOH 61 292 140 HOH HOH B . E 3 HOH 62 293 142 HOH HOH B . E 3 HOH 63 294 150 HOH HOH B . E 3 HOH 64 295 152 HOH HOH B . E 3 HOH 65 296 153 HOH HOH B . E 3 HOH 66 297 156 HOH HOH B . E 3 HOH 67 298 158 HOH HOH B . E 3 HOH 68 299 161 HOH HOH B . E 3 HOH 69 300 163 HOH HOH B . E 3 HOH 70 301 164 HOH HOH B . E 3 HOH 71 302 165 HOH HOH B . E 3 HOH 72 303 168 HOH HOH B . E 3 HOH 73 304 170 HOH HOH B . E 3 HOH 74 305 176 HOH HOH B . E 3 HOH 75 306 177 HOH HOH B . E 3 HOH 76 307 178 HOH HOH B . E 3 HOH 77 308 179 HOH HOH B . E 3 HOH 78 309 180 HOH HOH B . E 3 HOH 79 310 182 HOH HOH B . E 3 HOH 80 311 183 HOH HOH B . E 3 HOH 81 312 186 HOH HOH B . E 3 HOH 82 313 187 HOH HOH B . E 3 HOH 83 314 189 HOH HOH B . E 3 HOH 84 315 191 HOH HOH B . E 3 HOH 85 316 192 HOH HOH B . E 3 HOH 86 317 198 HOH HOH B . E 3 HOH 87 318 199 HOH HOH B . E 3 HOH 88 319 200 HOH HOH B . E 3 HOH 89 320 201 HOH HOH B . E 3 HOH 90 321 202 HOH HOH B . E 3 HOH 91 322 206 HOH HOH B . E 3 HOH 92 323 209 HOH HOH B . E 3 HOH 93 324 214 HOH HOH B . E 3 HOH 94 325 215 HOH HOH B . E 3 HOH 95 326 220 HOH HOH B . E 3 HOH 96 327 221 HOH HOH B . E 3 HOH 97 328 228 HOH HOH B . E 3 HOH 98 329 229 HOH HOH B . E 3 HOH 99 330 230 HOH HOH B . E 3 HOH 100 331 232 HOH HOH B . E 3 HOH 101 332 233 HOH HOH B . E 3 HOH 102 333 242 HOH HOH B . E 3 HOH 103 334 246 HOH HOH B . E 3 HOH 104 335 248 HOH HOH B . E 3 HOH 105 336 250 HOH HOH B . E 3 HOH 106 337 252 HOH HOH B . E 3 HOH 107 338 254 HOH HOH B . E 3 HOH 108 339 258 HOH HOH B . E 3 HOH 109 340 259 HOH HOH B . E 3 HOH 110 341 262 HOH HOH B . E 3 HOH 111 342 263 HOH HOH B . E 3 HOH 112 343 264 HOH HOH B . E 3 HOH 113 344 265 HOH HOH B . E 3 HOH 114 345 268 HOH HOH B . E 3 HOH 115 346 269 HOH HOH B . E 3 HOH 116 347 271 HOH HOH B . E 3 HOH 117 348 273 HOH HOH B . E 3 HOH 118 349 274 HOH HOH B . E 3 HOH 119 350 276 HOH HOH B . E 3 HOH 120 351 278 HOH HOH B . E 3 HOH 121 352 279 HOH HOH B . E 3 HOH 122 353 282 HOH HOH B . E 3 HOH 123 354 284 HOH HOH B . E 3 HOH 124 355 286 HOH HOH B . E 3 HOH 125 356 288 HOH HOH B . E 3 HOH 126 357 293 HOH HOH B . E 3 HOH 127 358 294 HOH HOH B . E 3 HOH 128 359 296 HOH HOH B . E 3 HOH 129 360 298 HOH HOH B . E 3 HOH 130 361 299 HOH HOH B . E 3 HOH 131 362 301 HOH HOH B . E 3 HOH 132 363 305 HOH HOH B . E 3 HOH 133 364 306 HOH HOH B . E 3 HOH 134 365 308 HOH HOH B . E 3 HOH 135 366 309 HOH HOH B . E 3 HOH 136 367 313 HOH HOH B . E 3 HOH 137 368 314 HOH HOH B . E 3 HOH 138 369 316 HOH HOH B . E 3 HOH 139 370 317 HOH HOH B . E 3 HOH 140 371 326 HOH HOH B . F 3 HOH 1 13 1 HOH HOH T . F 3 HOH 2 14 10 HOH HOH T . F 3 HOH 3 15 18 HOH HOH T . F 3 HOH 4 16 21 HOH HOH T . F 3 HOH 5 17 33 HOH HOH T . F 3 HOH 6 18 35 HOH HOH T . F 3 HOH 7 19 44 HOH HOH T . F 3 HOH 8 20 51 HOH HOH T . F 3 HOH 9 21 52 HOH HOH T . F 3 HOH 10 22 96 HOH HOH T . F 3 HOH 11 23 105 HOH HOH T . F 3 HOH 12 24 109 HOH HOH T . F 3 HOH 13 25 114 HOH HOH T . F 3 HOH 14 26 122 HOH HOH T . F 3 HOH 15 27 129 HOH HOH T . F 3 HOH 16 28 134 HOH HOH T . F 3 HOH 17 29 143 HOH HOH T . F 3 HOH 18 30 159 HOH HOH T . F 3 HOH 19 31 160 HOH HOH T . F 3 HOH 20 32 174 HOH HOH T . F 3 HOH 21 33 204 HOH HOH T . F 3 HOH 22 34 234 HOH HOH T . F 3 HOH 23 35 241 HOH HOH T . F 3 HOH 24 36 249 HOH HOH T . F 3 HOH 25 37 255 HOH HOH T . F 3 HOH 26 38 256 HOH HOH T . F 3 HOH 27 39 261 HOH HOH T . F 3 HOH 28 40 285 HOH HOH T . F 3 HOH 29 41 289 HOH HOH T . F 3 HOH 30 42 290 HOH HOH T . F 3 HOH 31 43 315 HOH HOH T . F 3 HOH 32 44 324 HOH HOH T . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2350 ? 1 MORE -18 ? 1 'SSA (A^2)' 9090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0077 ? 1 RemDAq 'data collection' . ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 PHASER phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 188 ? ? -103.84 -60.84 2 1 THR B 188 ? A -123.99 -66.37 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 146 ? A SER 1 2 1 Y 1 A PRO 147 ? A PRO 2 3 1 Y 1 A GLY 225 ? A GLY 80 4 1 Y 1 A HIS 226 ? A HIS 81 5 1 Y 1 A LYS 227 ? A LYS 82 6 1 Y 1 A ALA 228 ? A ALA 83 7 1 Y 1 A ARG 229 ? A ARG 84 8 1 Y 1 A VAL 230 ? A VAL 85 9 1 Y 1 A LEU 231 ? A LEU 86 10 1 Y 1 B SER 146 ? B SER 1 11 1 Y 1 B PRO 147 ? B PRO 2 12 1 Y 1 B THR 148 ? B THR 3 13 1 Y 1 B PRO 224 ? B PRO 79 14 1 Y 1 B GLY 225 ? B GLY 80 15 1 Y 1 B HIS 226 ? B HIS 81 16 1 Y 1 B LYS 227 ? B LYS 82 17 1 Y 1 B ALA 228 ? B ALA 83 18 1 Y 1 B ARG 229 ? B ARG 84 19 1 Y 1 B VAL 230 ? B VAL 85 20 1 Y 1 B LEU 231 ? B LEU 86 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BUO _pdbx_initial_refinement_model.details 'PDB entry 2BUO' #