HEADER TRANSCRIPTION 14-JUL-08 3DT3 TITLE HUMAN ESTROGEN RECEPTOR ALPHA LBD WITH GW368 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: ER, ESTRADIOL RECEPTOR, ER-ALPHA, NUCLEAR RECEPTOR SUBFAMILY COMPND 6 3 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHTC_ERA KEYWDS ESTROGEN RECEPTOR, NUCLEAR RECEPTOR, SERM, TRANSCRIPTION FACTOR, KEYWDS 2 ALPHA-HELICAL SANDWICH, DNA-BINDING, LIPID-BINDING, METAL-BINDING, KEYWDS 3 NUCLEUS, PHOSPHOPROTEIN, RECEPTOR, STEROID-BINDING, TRANSCRIPTION, KEYWDS 4 TRANSCRIPTION REGULATION, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR S.P.WILLIAMS,A.B.MILLER REVDAT 8 03-APR-24 3DT3 1 REMARK REVDAT 7 13-MAR-24 3DT3 1 COMPND SOURCE REVDAT 6 21-FEB-24 3DT3 1 REMARK SEQADV REVDAT 5 25-OCT-17 3DT3 1 REMARK REVDAT 4 13-JUL-11 3DT3 1 VERSN REVDAT 3 24-FEB-09 3DT3 1 VERSN REVDAT 2 30-SEP-08 3DT3 1 JRNL REVDAT 1 09-SEP-08 3DT3 0 JRNL AUTH J.FANG,A.AKWABI-AMEYAW,J.E.BRITTON,S.R.KATAMREDDY,F.NAVAS, JRNL AUTH 2 A.B.MILLER,S.P.WILLIAMS,D.W.GRAY,L.A.ORBAND-MILLER, JRNL AUTH 3 J.SHEARIN,D.HEYER JRNL TITL SYNTHESIS OF 3-ALKYL NAPHTHALENES AS NOVEL ESTROGEN RECEPTOR JRNL TITL 2 LIGANDS. JRNL REF BIOORG.MED.CHEM.LETT. V. 18 5075 2008 JRNL REFN ISSN 0960-894X JRNL PMID 18722117 JRNL DOI 10.1016/J.BMCL.2008.07.121 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 19680 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1394 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1268 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3709 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 100 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.94000 REMARK 3 B22 (A**2) : 2.44000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.39000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.583 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.296 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.209 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.250 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3833 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2489 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5193 ; 0.990 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6104 ; 0.837 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 469 ; 4.938 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;36.295 ;24.221 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 683 ;13.454 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;16.275 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 613 ; 0.053 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4253 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 752 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2368 ; 0.365 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 956 ; 0.051 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3786 ; 0.690 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1465 ; 1.034 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1407 ; 1.645 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 306 A 551 REMARK 3 RESIDUE RANGE : A 1 A 1 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6943 6.9328 20.6851 REMARK 3 T TENSOR REMARK 3 T11: -0.1700 T22: -0.1824 REMARK 3 T33: -0.1977 T12: -0.1131 REMARK 3 T13: -0.0134 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 4.4655 L22: 2.2646 REMARK 3 L33: 3.4410 L12: -0.3264 REMARK 3 L13: -0.1018 L23: 0.2136 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: -0.1983 S13: -0.0829 REMARK 3 S21: 0.0964 S22: -0.0292 S23: -0.0743 REMARK 3 S31: 0.0720 S32: 0.1019 S33: 0.0167 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 306 B 548 REMARK 3 RESIDUE RANGE : B 2 B 2 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1604 -6.2702 18.8561 REMARK 3 T TENSOR REMARK 3 T11: -0.2340 T22: -0.0414 REMARK 3 T33: -0.1611 T12: -0.0588 REMARK 3 T13: 0.0186 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 3.1211 L22: 5.5266 REMARK 3 L33: 2.4279 L12: 1.3519 REMARK 3 L13: -0.1344 L23: -0.0398 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: -0.0088 S13: 0.0202 REMARK 3 S21: 0.0931 S22: -0.1513 S23: 0.1885 REMARK 3 S31: 0.1420 S32: -0.0632 S33: 0.0951 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048453. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : BENT CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.48900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: ERA LBD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH7.0, 12% PEG4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.65450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.99800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.65450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.99800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 297 REMARK 465 SER A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 SER A 305 REMARK 465 TYR A 331 REMARK 465 ASP A 332 REMARK 465 PRO A 333 REMARK 465 THR A 334 REMARK 465 ARG A 335 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 LEU A 462 REMARK 465 CYS A 530 REMARK 465 LYS A 531 REMARK 465 GLY B 297 REMARK 465 SER B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 SER B 305 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 LYS B 531 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 LYS A 416 CG CD CE NZ REMARK 470 GLU A 419 CG CD OE1 OE2 REMARK 470 TYR A 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 463 OG REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 LYS A 481 CE NZ REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 VAL A 533 CG1 CG2 REMARK 470 TYR B 331 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR B 334 OG1 CG2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 339 CG CD OE1 OE2 REMARK 470 LYS B 362 CE NZ REMARK 470 LYS B 401 CE NZ REMARK 470 ARG B 412 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 LEU B 466 CG CD1 CD2 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 SER B 468 OG REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 LYS B 529 CG CD CE NZ REMARK 470 VAL B 533 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 340 -144.48 -76.94 REMARK 500 LEU A 408 82.08 -152.19 REMARK 500 LYS A 416 16.98 -63.28 REMARK 500 THR A 460 41.31 -109.38 REMARK 500 VAL A 533 39.64 -76.47 REMARK 500 GLU B 339 46.20 -76.56 REMARK 500 GLU B 397 0.08 -68.81 REMARK 500 LEU B 408 78.48 -151.92 REMARK 500 GLU B 419 -75.10 -36.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 369 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 369 B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1X7R RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA COMPLEXED WITH REMARK 900 GENISTEIN REMARK 900 RELATED ID: 1L2I RELATED DB: PDB REMARK 900 HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 (R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2,8-DIOL AND A REMARK 900 GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE REMARK 900 RELATED ID: 1X7E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA COMPLEXED WITH WAY-244 REMARK 900 RELATED ID: 1UOM RELATED DB: PDB REMARK 900 THE STRUCTURE OF ESTROGEN RECEPTOR IN COMPLEX WITH A SELECTIVE AND REMARK 900 POTENT TETRAHYDROISOCHIOLIN LIGAND. REMARK 900 RELATED ID: 3ERT RELATED DB: PDB REMARK 900 HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 4-HYDROXYTAMOXIFEN REMARK 900 RELATED ID: 2OUZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA-LASOFOXIFENE COMPLEX DBREF 3DT3 A 299 551 UNP P03372 ESR1_HUMAN 299 551 DBREF 3DT3 B 299 551 UNP P03372 ESR1_HUMAN 299 551 SEQADV 3DT3 GLY A 297 UNP P03372 EXPRESSION TAG SEQADV 3DT3 SER A 298 UNP P03372 EXPRESSION TAG SEQADV 3DT3 GLY B 297 UNP P03372 EXPRESSION TAG SEQADV 3DT3 SER B 298 UNP P03372 EXPRESSION TAG SEQRES 1 A 255 GLY SER LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER SEQRES 2 A 255 LEU THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA SEQRES 3 A 255 GLU PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG SEQRES 4 A 255 PRO PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN SEQRES 5 A 255 LEU ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA SEQRES 6 A 255 LYS ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP SEQRES 7 A 255 GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU SEQRES 8 A 255 MET ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY SEQRES 9 A 255 LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN SEQRES 10 A 255 GLN GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP SEQRES 11 A 255 MET LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN SEQRES 12 A 255 LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE SEQRES 13 A 255 LEU LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR SEQRES 14 A 255 LEU LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL SEQRES 15 A 255 LEU ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA SEQRES 16 A 255 LYS ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU SEQRES 17 A 255 ALA GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SEQRES 18 A 255 SER ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS SEQRES 19 A 255 LYS ASN VAL VAL PRO LEU TYR ASP LEU LEU LEU GLU MET SEQRES 20 A 255 LEU ASP ALA HIS ARG LEU HIS ALA SEQRES 1 B 255 GLY SER LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER SEQRES 2 B 255 LEU THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA SEQRES 3 B 255 GLU PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG SEQRES 4 B 255 PRO PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN SEQRES 5 B 255 LEU ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA SEQRES 6 B 255 LYS ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP SEQRES 7 B 255 GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU SEQRES 8 B 255 MET ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY SEQRES 9 B 255 LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN SEQRES 10 B 255 GLN GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP SEQRES 11 B 255 MET LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN SEQRES 12 B 255 LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE SEQRES 13 B 255 LEU LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR SEQRES 14 B 255 LEU LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL SEQRES 15 B 255 LEU ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA SEQRES 16 B 255 LYS ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU SEQRES 17 B 255 ALA GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SEQRES 18 B 255 SER ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS SEQRES 19 B 255 LYS ASN VAL VAL PRO LEU TYR ASP LEU LEU LEU GLU MET SEQRES 20 B 255 LEU ASP ALA HIS ARG LEU HIS ALA HET 369 A 1 27 HET 369 B 2 27 HETNAM 369 5-(4-HYDROXYPHENOXY)-6-(3-HYDROXYPHENYL)-7- HETNAM 2 369 METHYLNAPHTHALEN-2-OL FORMUL 3 369 2(C23 H18 O4) FORMUL 5 HOH *100(H2 O) HELIX 1 1 LEU A 306 LEU A 310 5 5 HELIX 2 2 THR A 311 GLU A 323 1 13 HELIX 3 3 SER A 341 LYS A 362 1 22 HELIX 4 4 GLY A 366 LEU A 370 5 5 HELIX 5 5 THR A 371 MET A 396 1 26 HELIX 6 6 ARG A 412 LYS A 416 1 5 HELIX 7 7 GLY A 420 MET A 438 1 19 HELIX 8 8 GLN A 441 SER A 456 1 16 HELIX 9 9 GLY A 457 PHE A 461 5 5 HELIX 10 10 THR A 465 ALA A 493 1 29 HELIX 11 11 THR A 496 TYR A 526 1 31 HELIX 12 12 PRO A 535 ASP A 545 1 11 HELIX 13 13 LEU B 306 LEU B 310 5 5 HELIX 14 14 THR B 311 ALA B 322 1 12 HELIX 15 15 SER B 341 LYS B 362 1 22 HELIX 16 16 GLY B 366 LEU B 370 5 5 HELIX 17 17 THR B 371 MET B 396 1 26 HELIX 18 18 ARG B 412 LYS B 416 1 5 HELIX 19 19 MET B 421 ASN B 439 1 19 HELIX 20 20 GLN B 441 SER B 456 1 16 HELIX 21 21 THR B 465 ALA B 493 1 29 HELIX 22 22 THR B 496 SER B 527 1 32 HELIX 23 23 PRO B 535 HIS B 547 1 13 SHEET 1 A 2 LYS A 401 ALA A 405 0 SHEET 2 A 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 B 2 LYS B 401 ALA B 405 0 SHEET 2 B 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SITE 1 AC1 11 LEU A 346 THR A 347 ALA A 350 GLU A 353 SITE 2 AC1 11 MET A 388 ARG A 394 GLY A 521 HIS A 524 SITE 3 AC1 11 LEU A 525 HOH A 569 HOH A 605 SITE 1 AC2 10 LEU B 346 THR B 347 ALA B 350 GLU B 353 SITE 2 AC2 10 MET B 388 ARG B 394 PHE B 404 GLY B 521 SITE 3 AC2 10 HIS B 524 LEU B 525 CRYST1 103.309 57.996 88.331 90.00 105.15 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009680 0.000000 0.002622 0.00000 SCALE2 0.000000 0.017243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011729 0.00000