data_3EER # _entry.id 3EER # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3EER RCSB RCSB049231 WWPDB D_1000049231 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id IDP001325 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3EER _pdbx_database_status.recvd_initial_deposition_date 2008-09-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nocek, B.' 1 'Maltseva, N.' 2 'Kwon, K.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title ;High resolution crystal structure of the organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961 ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nocek, B.' 1 primary 'Mulligan, R.' 2 primary 'Kwon, K.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 3EER _cell.length_a 59.649 _cell.length_b 71.127 _cell.length_c 71.629 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EER _symmetry.space_group_name_H-M 'I 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Organic hydroperoxide resistance protein, putative' 15436.041 1 ? ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 7 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 4 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 5 water nat water 18.015 182 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAMRNKN(MSE)STIYQTSATASAGRNGVVSTEDKLLELNLSYPKE(MSE)GGSGTATNPEQLFAVGYAACFSNAILHV AREAKVALKEAPVTATVGIGPNGQGGFALSVALAAHIALEDEQARQLVTVAHQVCPYSNAVRGNIDVQVSVNGLAL ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMRNKNMSTIYQTSATASAGRNGVVSTEDKLLELNLSYPKEMGGSGTATNPEQLFAVGYAACFSNAILHVAREAKVAL KEAPVTATVGIGPNGQGGFALSVALAAHIALEDEQARQLVTVAHQVCPYSNAVRGNIDVQVSVNGLAL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP001325 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 ARG n 1 6 ASN n 1 7 LYS n 1 8 ASN n 1 9 MSE n 1 10 SER n 1 11 THR n 1 12 ILE n 1 13 TYR n 1 14 GLN n 1 15 THR n 1 16 SER n 1 17 ALA n 1 18 THR n 1 19 ALA n 1 20 SER n 1 21 ALA n 1 22 GLY n 1 23 ARG n 1 24 ASN n 1 25 GLY n 1 26 VAL n 1 27 VAL n 1 28 SER n 1 29 THR n 1 30 GLU n 1 31 ASP n 1 32 LYS n 1 33 LEU n 1 34 LEU n 1 35 GLU n 1 36 LEU n 1 37 ASN n 1 38 LEU n 1 39 SER n 1 40 TYR n 1 41 PRO n 1 42 LYS n 1 43 GLU n 1 44 MSE n 1 45 GLY n 1 46 GLY n 1 47 SER n 1 48 GLY n 1 49 THR n 1 50 ALA n 1 51 THR n 1 52 ASN n 1 53 PRO n 1 54 GLU n 1 55 GLN n 1 56 LEU n 1 57 PHE n 1 58 ALA n 1 59 VAL n 1 60 GLY n 1 61 TYR n 1 62 ALA n 1 63 ALA n 1 64 CYS n 1 65 PHE n 1 66 SER n 1 67 ASN n 1 68 ALA n 1 69 ILE n 1 70 LEU n 1 71 HIS n 1 72 VAL n 1 73 ALA n 1 74 ARG n 1 75 GLU n 1 76 ALA n 1 77 LYS n 1 78 VAL n 1 79 ALA n 1 80 LEU n 1 81 LYS n 1 82 GLU n 1 83 ALA n 1 84 PRO n 1 85 VAL n 1 86 THR n 1 87 ALA n 1 88 THR n 1 89 VAL n 1 90 GLY n 1 91 ILE n 1 92 GLY n 1 93 PRO n 1 94 ASN n 1 95 GLY n 1 96 GLN n 1 97 GLY n 1 98 GLY n 1 99 PHE n 1 100 ALA n 1 101 LEU n 1 102 SER n 1 103 VAL n 1 104 ALA n 1 105 LEU n 1 106 ALA n 1 107 ALA n 1 108 HIS n 1 109 ILE n 1 110 ALA n 1 111 LEU n 1 112 GLU n 1 113 ASP n 1 114 GLU n 1 115 GLN n 1 116 ALA n 1 117 ARG n 1 118 GLN n 1 119 LEU n 1 120 VAL n 1 121 THR n 1 122 VAL n 1 123 ALA n 1 124 HIS n 1 125 GLN n 1 126 VAL n 1 127 CYS n 1 128 PRO n 1 129 TYR n 1 130 SER n 1 131 ASN n 1 132 ALA n 1 133 VAL n 1 134 ARG n 1 135 GLY n 1 136 ASN n 1 137 ILE n 1 138 ASP n 1 139 VAL n 1 140 GLN n 1 141 VAL n 1 142 SER n 1 143 VAL n 1 144 ASN n 1 145 GLY n 1 146 LEU n 1 147 ALA n 1 148 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VC_A1006 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain N16961 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae O1 biovar El Tor' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243277 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BLD21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pMCSG7 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KKU4_VIBCH _struct_ref.pdbx_db_accession Q9KKU4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRNKNMSTIYQTSATASAGRNGVVSTEDKLLELNLSYPKEMGGSGTATNPEQLFAVGYAACFSNAILHVAREAKVALKEA PVTATVGIGPNGQGGFALSVALAAHIALEDEQARQLVTVAHQVCPYSNAVRGNIDVQVSVNGLAL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3EER _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9KKU4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 145 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 145 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EER SER A 1 ? UNP Q9KKU4 ? ? 'EXPRESSION TAG' -2 1 1 3EER ASN A 2 ? UNP Q9KKU4 ? ? 'EXPRESSION TAG' -1 2 1 3EER ALA A 3 ? UNP Q9KKU4 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3EER _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M ZnAcetate, 0.1 M Imidazole, 20% Peg 3000, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-3 _diffrn_detector.pdbx_collection_date 2008-08-16 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength 0.9794 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3EER _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 1.450 _reflns.number_obs 27234 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.10600 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.7000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.48 _reflns_shell.percent_possible_all 90.9 _reflns_shell.Rmerge_I_obs 0.46400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.340 _reflns_shell.pdbx_redundancy 2.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3EER _refine.ls_number_reflns_obs 25858 _refine.ls_number_reflns_all 27216 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 99.0 _refine.ls_R_factor_obs 0.141 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.139 _refine.ls_R_factor_R_free 0.164 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1358 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 5.82 _refine.aniso_B[1][1] 0.47000 _refine.aniso_B[2][2] -0.08000 _refine.aniso_B[3][3] -0.40000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.051 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.overall_SU_ML 0.031 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.360 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1009 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 1230 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1075 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 660 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.508 1.975 ? 1465 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.986 3.000 ? 1637 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.635 5.000 ? 149 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.118 25.610 ? 41 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.360 15.000 ? 161 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.242 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.097 0.200 ? 176 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1249 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 197 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.843 1.500 ? 728 'X-RAY DIFFRACTION' ? r_mcbond_other 0.255 1.500 ? 292 'X-RAY DIFFRACTION' ? r_mcangle_it 1.377 2.000 ? 1147 'X-RAY DIFFRACTION' ? r_scbond_it 2.156 3.000 ? 347 'X-RAY DIFFRACTION' ? r_scangle_it 3.316 4.500 ? 313 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.45 _refine_ls_shell.d_res_low 1.49 _refine_ls_shell.number_reflns_R_work 1717 _refine_ls_shell.R_factor_R_work 0.2150 _refine_ls_shell.percent_reflns_obs 90.64 _refine_ls_shell.R_factor_R_free 0.2710 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 103 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3EER _struct.title 'High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961' _struct.pdbx_descriptor 'Organic hydroperoxide resistance protein, putative' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EER _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;CSGID, organic hydroperoxide resistance protein, ORHC, Structural Genomics, Center for Structural Genomics of Infectious Diseases, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 4 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 41 ? GLY A 45 ? PRO A 38 GLY A 42 5 ? 5 HELX_P HELX_P2 2 ASN A 52 ? ALA A 76 ? ASN A 49 ALA A 73 1 ? 25 HELX_P HELX_P3 3 GLU A 112 ? CYS A 127 ? GLU A 109 CYS A 124 1 ? 16 HELX_P HELX_P4 4 CYS A 127 ? ARG A 134 ? CYS A 124 ARG A 131 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 9 C ? ? ? 1_555 A SER 10 N ? ? A MSE 6 A SER 7 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale ? ? A GLU 43 C ? ? ? 1_555 A MSE 44 N ? ? A GLU 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.313 ? covale3 covale ? ? A MSE 44 C ? ? ? 1_555 A GLY 45 N ? ? A MSE 41 A GLY 42 1_555 ? ? ? ? ? ? ? 1.307 ? metalc1 metalc ? ? A GLU 43 OE1 ? ? ? 1_555 I ZN . ZN ? ? A GLU 40 A ZN 2001 1_555 ? ? ? ? ? ? ? 2.042 ? metalc2 metalc ? ? A CYS 64 O ? ? ? 1_555 L ZN . ZN ? ? A CYS 61 A ZN 2004 1_555 ? ? ? ? ? ? ? 2.111 ? metalc3 metalc ? ? A CYS 64 SG ? ? ? 1_555 L ZN . ZN ? ? A CYS 61 A ZN 2004 1_555 ? ? ? ? ? ? ? 2.282 ? metalc4 metalc ? ? A HIS 71 ND1 ? ? ? 1_555 J ZN . ZN ? ? A HIS 68 A ZN 2002 1_555 ? ? ? ? ? ? ? 2.039 ? metalc5 metalc ? ? A GLU 82 OE2 ? ? ? 1_555 K ZN . ZN ? ? A GLU 79 A ZN 2003 1_555 ? ? ? ? ? ? ? 1.937 ? metalc6 metalc ? ? A HIS 108 NE2 ? ? ? 1_555 M ZN . ZN ? ? A HIS 105 A ZN 2005 1_555 ? ? ? ? ? ? ? 2.035 ? metalc7 metalc ? ? A CYS 127 SG ? ? ? 1_555 L ZN . ZN ? ? A CYS 124 A ZN 2004 1_555 ? ? ? ? ? ? ? 2.325 ? metalc8 metalc ? ? A LEU 148 OXT ? ? ? 1_555 N ZN . ZN ? ? A LEU 145 A ZN 2006 1_555 ? ? ? ? ? ? ? 1.926 ? metalc9 metalc ? ? B ACT . O ? ? ? 1_555 I ZN . ZN ? ? A ACT 1001 A ZN 2001 1_555 ? ? ? ? ? ? ? 1.935 ? metalc10 metalc ? ? C ACT . O ? ? ? 1_555 L ZN . ZN ? ? A ACT 1002 A ZN 2004 1_555 ? ? ? ? ? ? ? 1.985 ? metalc11 metalc ? ? D ACT . OXT ? ? ? 1_555 J ZN . ZN ? ? A ACT 1003 A ZN 2002 1_555 ? ? ? ? ? ? ? 1.978 ? metalc12 metalc ? ? E ACT . OXT ? ? ? 1_555 M ZN . ZN ? ? A ACT 1004 A ZN 2005 1_555 ? ? ? ? ? ? ? 1.975 ? metalc13 metalc ? ? H ACT . O ? ? ? 1_555 J ZN . ZN ? ? A ACT 1007 A ZN 2002 1_555 ? ? ? ? ? ? ? 2.021 ? metalc14 metalc ? ? I ZN . ZN ? ? ? 1_555 P HOH . O ? ? A ZN 2001 A HOH 3155 1_555 ? ? ? ? ? ? ? 2.076 ? metalc15 metalc ? ? I ZN . ZN ? ? ? 1_555 P HOH . O ? ? A ZN 2001 A HOH 3152 1_555 ? ? ? ? ? ? ? 1.978 ? metalc16 metalc ? ? J ZN . ZN ? ? ? 1_555 P HOH . O A ? A ZN 2002 A HOH 3153 1_555 ? ? ? ? ? ? ? 2.091 ? metalc17 metalc ? ? K ZN . ZN ? ? ? 1_555 O IMD . N1 ? ? A ZN 2003 A IMD 3001 1_555 ? ? ? ? ? ? ? 1.995 ? metalc18 metalc ? ? N ZN . ZN ? ? ? 1_555 P HOH . O ? ? A ZN 2006 A HOH 3183 1_555 ? ? ? ? ? ? ? 1.956 ? metalc19 metalc ? ? N ZN . ZN ? ? ? 1_555 P HOH . O ? ? A ZN 2006 A HOH 3104 1_555 ? ? ? ? ? ? ? 2.247 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 17 ? ALA A 19 ? ALA A 14 ALA A 16 A 2 GLY A 25 ? THR A 29 ? GLY A 22 THR A 26 A 3 GLU A 35 ? LEU A 38 ? GLU A 32 LEU A 35 B 1 VAL A 85 ? PRO A 93 ? VAL A 82 PRO A 90 B 2 PHE A 99 ? ALA A 107 ? PHE A 96 ALA A 104 B 3 GLN A 140 ? VAL A 143 ? GLN A 137 VAL A 140 B 4 LEU A 146 ? ALA A 147 ? LEU A 143 ALA A 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 18 ? N THR A 15 O SER A 28 ? O SER A 25 A 2 3 N VAL A 27 ? N VAL A 24 O LEU A 36 ? O LEU A 33 B 1 2 N THR A 88 ? N THR A 85 O ALA A 104 ? O ALA A 101 B 2 3 N ALA A 107 ? N ALA A 104 O SER A 142 ? O SER A 139 B 3 4 N VAL A 143 ? N VAL A 140 O LEU A 146 ? O LEU A 143 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE ACT A1001' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE ACT A1002' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ACT A1003' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A1004' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ACT A1005' AC6 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A1006' AC7 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE ACT A1007' AC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A2001' AC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A2002' BC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A2003' BC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A2004' BC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ZN A2005' BC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A2006' BC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE IMD A3001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TYR A 13 ? TYR A 10 . ? 8_555 ? 2 AC1 9 LEU A 33 ? LEU A 30 . ? 8_555 ? 3 AC1 9 PRO A 41 ? PRO A 38 . ? 1_555 ? 4 AC1 9 LYS A 42 ? LYS A 39 . ? 1_555 ? 5 AC1 9 GLU A 43 ? GLU A 40 . ? 1_555 ? 6 AC1 9 GLY A 48 ? GLY A 45 . ? 1_555 ? 7 AC1 9 ZN I . ? ZN A 2001 . ? 1_555 ? 8 AC1 9 HOH P . ? HOH A 3026 . ? 8_555 ? 9 AC1 9 HOH P . ? HOH A 3152 . ? 1_555 ? 10 AC2 8 ARG A 23 ? ARG A 20 . ? 8_555 ? 11 AC2 8 CYS A 64 ? CYS A 61 . ? 1_555 ? 12 AC2 8 ASN A 67 ? ASN A 64 . ? 1_555 ? 13 AC2 8 ALA A 68 ? ALA A 65 . ? 1_555 ? 14 AC2 8 CYS A 127 ? CYS A 124 . ? 1_555 ? 15 AC2 8 PRO A 128 ? PRO A 125 . ? 1_555 ? 16 AC2 8 ACT H . ? ACT A 1007 . ? 1_555 ? 17 AC2 8 ZN L . ? ZN A 2004 . ? 1_555 ? 18 AC3 6 TYR A 40 ? TYR A 37 . ? 8_555 ? 19 AC3 6 ASN A 67 ? ASN A 64 . ? 1_555 ? 20 AC3 6 HIS A 71 ? HIS A 68 . ? 1_555 ? 21 AC3 6 ARG A 74 ? ARG A 71 . ? 1_555 ? 22 AC3 6 ACT H . ? ACT A 1007 . ? 1_555 ? 23 AC3 6 ZN J . ? ZN A 2002 . ? 1_555 ? 24 AC4 5 ALA A 106 ? ALA A 103 . ? 7_555 ? 25 AC4 5 HIS A 108 ? HIS A 105 . ? 7_555 ? 26 AC4 5 ZN M . ? ZN A 2005 . ? 1_555 ? 27 AC4 5 HOH P . ? HOH A 3005 . ? 1_555 ? 28 AC4 5 HOH P . ? HOH A 3056 . ? 7_555 ? 29 AC5 6 GLU A 82 ? GLU A 79 . ? 7_555 ? 30 AC5 6 ASP A 113 ? ASP A 110 . ? 1_555 ? 31 AC5 6 ZN K . ? ZN A 2003 . ? 7_555 ? 32 AC5 6 IMD O . ? IMD A 3001 . ? 7_555 ? 33 AC5 6 HOH P . ? HOH A 3011 . ? 7_555 ? 34 AC5 6 HOH P . ? HOH A 3042 . ? 1_555 ? 35 AC6 5 GLU A 30 ? GLU A 27 . ? 1_555 ? 36 AC6 5 THR A 88 ? THR A 85 . ? 2_555 ? 37 AC6 5 ALA A 104 ? ALA A 101 . ? 2_555 ? 38 AC6 5 HOH P . ? HOH A 3039 . ? 2_555 ? 39 AC6 5 HOH P . ? HOH A 3138 . ? 1_555 ? 40 AC7 7 TYR A 40 ? TYR A 37 . ? 8_555 ? 41 AC7 7 ASN A 67 ? ASN A 64 . ? 1_555 ? 42 AC7 7 HIS A 71 ? HIS A 68 . ? 1_555 ? 43 AC7 7 PHE A 99 ? PHE A 96 . ? 8_555 ? 44 AC7 7 ACT C . ? ACT A 1002 . ? 1_555 ? 45 AC7 7 ACT D . ? ACT A 1003 . ? 1_555 ? 46 AC7 7 ZN J . ? ZN A 2002 . ? 1_555 ? 47 AC8 4 GLU A 43 ? GLU A 40 . ? 1_555 ? 48 AC8 4 ACT B . ? ACT A 1001 . ? 1_555 ? 49 AC8 4 HOH P . ? HOH A 3152 . ? 1_555 ? 50 AC8 4 HOH P . ? HOH A 3155 . ? 1_555 ? 51 AC9 4 HIS A 71 ? HIS A 68 . ? 1_555 ? 52 AC9 4 ACT D . ? ACT A 1003 . ? 1_555 ? 53 AC9 4 ACT H . ? ACT A 1007 . ? 1_555 ? 54 AC9 4 HOH P . ? HOH A 3153 . ? 1_555 ? 55 BC1 4 GLU A 82 ? GLU A 79 . ? 1_555 ? 56 BC1 4 ASP A 113 ? ASP A 110 . ? 7_555 ? 57 BC1 4 ACT F . ? ACT A 1005 . ? 7_555 ? 58 BC1 4 IMD O . ? IMD A 3001 . ? 1_555 ? 59 BC2 4 CYS A 64 ? CYS A 61 . ? 1_555 ? 60 BC2 4 CYS A 127 ? CYS A 124 . ? 1_555 ? 61 BC2 4 PRO A 128 ? PRO A 125 . ? 1_555 ? 62 BC2 4 ACT C . ? ACT A 1002 . ? 1_555 ? 63 BC3 2 HIS A 108 ? HIS A 105 . ? 7_555 ? 64 BC3 2 ACT E . ? ACT A 1004 . ? 7_555 ? 65 BC4 4 GLU A 114 ? GLU A 111 . ? 6_655 ? 66 BC4 4 LEU A 148 ? LEU A 145 . ? 1_555 ? 67 BC4 4 HOH P . ? HOH A 3104 . ? 1_555 ? 68 BC4 4 HOH P . ? HOH A 3183 . ? 1_555 ? 69 BC5 7 GLU A 82 ? GLU A 79 . ? 1_555 ? 70 BC5 7 PRO A 84 ? PRO A 81 . ? 1_555 ? 71 BC5 7 HIS A 108 ? HIS A 105 . ? 1_555 ? 72 BC5 7 ASP A 113 ? ASP A 110 . ? 7_555 ? 73 BC5 7 ASN A 144 ? ASN A 141 . ? 7_555 ? 74 BC5 7 ACT F . ? ACT A 1005 . ? 7_555 ? 75 BC5 7 ZN K . ? ZN A 2003 . ? 1_555 ? # _database_PDB_matrix.entry_id 3EER _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3EER _atom_sites.fract_transf_matrix[1][1] 0.016765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014059 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013961 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 ARG 5 2 ? ? ? A . n A 1 6 ASN 6 3 ? ? ? A . n A 1 7 LYS 7 4 ? ? ? A . n A 1 8 ASN 8 5 ? ? ? A . n A 1 9 MSE 9 6 6 MSE MSE A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 THR 11 8 8 THR THR A . n A 1 12 ILE 12 9 9 ILE ILE A . n A 1 13 TYR 13 10 10 TYR TYR A . n A 1 14 GLN 14 11 11 GLN GLN A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 SER 16 13 13 SER SER A . n A 1 17 ALA 17 14 14 ALA ALA A . n A 1 18 THR 18 15 15 THR THR A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 ALA 21 18 18 ALA ALA A . n A 1 22 GLY 22 19 19 GLY GLY A . n A 1 23 ARG 23 20 20 ARG ARG A . n A 1 24 ASN 24 21 21 ASN ASN A . n A 1 25 GLY 25 22 22 GLY GLY A . n A 1 26 VAL 26 23 23 VAL VAL A . n A 1 27 VAL 27 24 24 VAL VAL A . n A 1 28 SER 28 25 25 SER SER A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 GLU 30 27 27 GLU GLU A . n A 1 31 ASP 31 28 28 ASP ASP A . n A 1 32 LYS 32 29 29 LYS LYS A . n A 1 33 LEU 33 30 30 LEU LEU A . n A 1 34 LEU 34 31 31 LEU LEU A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASN 37 34 34 ASN ASN A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 SER 39 36 36 SER SER A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 PRO 41 38 38 PRO PRO A . n A 1 42 LYS 42 39 39 LYS LYS A . n A 1 43 GLU 43 40 40 GLU GLU A . n A 1 44 MSE 44 41 41 MSE MSE A . n A 1 45 GLY 45 42 42 GLY GLY A . n A 1 46 GLY 46 43 43 GLY GLY A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 GLY 48 45 45 GLY GLY A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 THR 51 48 48 THR THR A . n A 1 52 ASN 52 49 49 ASN ASN A . n A 1 53 PRO 53 50 50 PRO PRO A . n A 1 54 GLU 54 51 51 GLU GLU A . n A 1 55 GLN 55 52 52 GLN GLN A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 VAL 59 56 56 VAL VAL A . n A 1 60 GLY 60 57 57 GLY GLY A . n A 1 61 TYR 61 58 58 TYR TYR A . n A 1 62 ALA 62 59 59 ALA ALA A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 CYS 64 61 61 CYS CYS A . n A 1 65 PHE 65 62 62 PHE PHE A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASN 67 64 64 ASN ASN A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 LEU 70 67 67 LEU LEU A . n A 1 71 HIS 71 68 68 HIS HIS A . n A 1 72 VAL 72 69 69 VAL VAL A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 ARG 74 71 71 ARG ARG A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 LYS 77 74 74 LYS LYS A . n A 1 78 VAL 78 75 75 VAL VAL A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 LEU 80 77 77 LEU LEU A . n A 1 81 LYS 81 78 78 LYS LYS A . n A 1 82 GLU 82 79 79 GLU GLU A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 PRO 84 81 81 PRO PRO A . n A 1 85 VAL 85 82 82 VAL VAL A . n A 1 86 THR 86 83 83 THR THR A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 THR 88 85 85 THR THR A . n A 1 89 VAL 89 86 86 VAL VAL A . n A 1 90 GLY 90 87 87 GLY GLY A . n A 1 91 ILE 91 88 88 ILE ILE A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 PRO 93 90 90 PRO PRO A . n A 1 94 ASN 94 91 91 ASN ASN A . n A 1 95 GLY 95 92 92 GLY GLY A . n A 1 96 GLN 96 93 93 GLN GLN A . n A 1 97 GLY 97 94 94 GLY GLY A . n A 1 98 GLY 98 95 95 GLY GLY A . n A 1 99 PHE 99 96 96 PHE PHE A . n A 1 100 ALA 100 97 97 ALA ALA A . n A 1 101 LEU 101 98 98 LEU LEU A . n A 1 102 SER 102 99 99 SER SER A . n A 1 103 VAL 103 100 100 VAL VAL A . n A 1 104 ALA 104 101 101 ALA ALA A . n A 1 105 LEU 105 102 102 LEU LEU A . n A 1 106 ALA 106 103 103 ALA ALA A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 HIS 108 105 105 HIS HIS A . n A 1 109 ILE 109 106 106 ILE ILE A . n A 1 110 ALA 110 107 107 ALA ALA A . n A 1 111 LEU 111 108 108 LEU LEU A . n A 1 112 GLU 112 109 109 GLU GLU A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 GLN 115 112 112 GLN GLN A . n A 1 116 ALA 116 113 113 ALA ALA A . n A 1 117 ARG 117 114 114 ARG ARG A . n A 1 118 GLN 118 115 115 GLN GLN A . n A 1 119 LEU 119 116 116 LEU LEU A . n A 1 120 VAL 120 117 117 VAL VAL A . n A 1 121 THR 121 118 118 THR THR A . n A 1 122 VAL 122 119 119 VAL VAL A . n A 1 123 ALA 123 120 120 ALA ALA A . n A 1 124 HIS 124 121 121 HIS HIS A . n A 1 125 GLN 125 122 122 GLN GLN A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 CYS 127 124 124 CYS CYS A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 TYR 129 126 126 TYR TYR A . n A 1 130 SER 130 127 127 SER SER A . n A 1 131 ASN 131 128 128 ASN ASN A . n A 1 132 ALA 132 129 129 ALA ALA A . n A 1 133 VAL 133 130 130 VAL VAL A . n A 1 134 ARG 134 131 131 ARG ARG A . n A 1 135 GLY 135 132 132 GLY GLY A . n A 1 136 ASN 136 133 133 ASN ASN A . n A 1 137 ILE 137 134 134 ILE ILE A . n A 1 138 ASP 138 135 135 ASP ASP A . n A 1 139 VAL 139 136 136 VAL VAL A . n A 1 140 GLN 140 137 137 GLN GLN A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 SER 142 139 139 SER SER A . n A 1 143 VAL 143 140 140 VAL VAL A . n A 1 144 ASN 144 141 141 ASN ASN A . n A 1 145 GLY 145 142 142 GLY GLY A . n A 1 146 LEU 146 143 143 LEU LEU A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 LEU 148 145 145 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 9 A MSE 6 ? MET SELENOMETHIONINE 2 A MSE 44 A MSE 41 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9150 ? 1 MORE -309 ? 1 'SSA (A^2)' 11690 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x,-y,-z+1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 35.8145000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 2005 ? M ZN . 2 1 A HOH 3007 ? P HOH . 3 1 A HOH 3021 ? P HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 43 ? A GLU 40 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? B ACT . ? A ACT 1001 ? 1_555 106.3 ? 2 OE1 ? A GLU 43 ? A GLU 40 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? P HOH . ? A HOH 3155 ? 1_555 120.1 ? 3 O ? B ACT . ? A ACT 1001 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? P HOH . ? A HOH 3155 ? 1_555 111.9 ? 4 OE1 ? A GLU 43 ? A GLU 40 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? P HOH . ? A HOH 3152 ? 1_555 112.1 ? 5 O ? B ACT . ? A ACT 1001 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? P HOH . ? A HOH 3152 ? 1_555 96.8 ? 6 O ? P HOH . ? A HOH 3155 ? 1_555 ZN ? I ZN . ? A ZN 2001 ? 1_555 O ? P HOH . ? A HOH 3152 ? 1_555 107.1 ? 7 O ? A CYS 64 ? A CYS 61 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 SG ? A CYS 64 ? A CYS 61 ? 1_555 101.0 ? 8 O ? A CYS 64 ? A CYS 61 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 SG ? A CYS 127 ? A CYS 124 ? 1_555 106.8 ? 9 SG ? A CYS 64 ? A CYS 61 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 SG ? A CYS 127 ? A CYS 124 ? 1_555 107.0 ? 10 O ? A CYS 64 ? A CYS 61 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 O ? C ACT . ? A ACT 1002 ? 1_555 102.8 ? 11 SG ? A CYS 64 ? A CYS 61 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 O ? C ACT . ? A ACT 1002 ? 1_555 122.7 ? 12 SG ? A CYS 127 ? A CYS 124 ? 1_555 ZN ? L ZN . ? A ZN 2004 ? 1_555 O ? C ACT . ? A ACT 1002 ? 1_555 114.5 ? 13 ND1 ? A HIS 71 ? A HIS 68 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 OXT ? D ACT . ? A ACT 1003 ? 1_555 113.2 ? 14 ND1 ? A HIS 71 ? A HIS 68 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 O ? H ACT . ? A ACT 1007 ? 1_555 101.2 ? 15 OXT ? D ACT . ? A ACT 1003 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 O ? H ACT . ? A ACT 1007 ? 1_555 105.1 ? 16 ND1 ? A HIS 71 ? A HIS 68 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 O A P HOH . ? A HOH 3153 ? 1_555 110.7 ? 17 OXT ? D ACT . ? A ACT 1003 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 O A P HOH . ? A HOH 3153 ? 1_555 111.5 ? 18 O ? H ACT . ? A ACT 1007 ? 1_555 ZN ? J ZN . ? A ZN 2002 ? 1_555 O A P HOH . ? A HOH 3153 ? 1_555 114.9 ? 19 OE2 ? A GLU 82 ? A GLU 79 ? 1_555 ZN ? K ZN . ? A ZN 2003 ? 1_555 N1 ? O IMD . ? A IMD 3001 ? 1_555 110.8 ? 20 NE2 ? A HIS 108 ? A HIS 105 ? 1_555 ZN ? M ZN . ? A ZN 2005 ? 1_555 OXT ? E ACT . ? A ACT 1004 ? 1_555 106.7 ? 21 OXT ? A LEU 148 ? A LEU 145 ? 1_555 ZN ? N ZN . ? A ZN 2006 ? 1_555 O ? P HOH . ? A HOH 3183 ? 1_555 103.3 ? 22 OXT ? A LEU 148 ? A LEU 145 ? 1_555 ZN ? N ZN . ? A ZN 2006 ? 1_555 O ? P HOH . ? A HOH 3104 ? 1_555 108.3 ? 23 O ? P HOH . ? A HOH 3183 ? 1_555 ZN ? N ZN . ? A ZN 2006 ? 1_555 O ? P HOH . ? A HOH 3104 ? 1_555 88.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 17.2509 7.7785 32.3302 0.0517 0.0609 0.0287 0.0005 0.0146 -0.0072 8.1990 4.5944 7.9632 5.0793 3.9086 1.3011 -0.0699 0.0041 -0.1503 0.0739 0.0037 -0.1587 -0.2187 0.4068 0.0663 'X-RAY DIFFRACTION' 2 ? refined 10.3898 -8.6693 24.6132 0.0284 0.0552 0.0487 -0.0012 -0.0035 0.0029 0.3398 1.0063 1.0208 0.2739 0.1588 -0.2532 0.0219 0.0210 0.0577 0.0593 0.0282 0.0203 0.0872 -0.0640 -0.0502 'X-RAY DIFFRACTION' 3 ? refined 5.5006 -6.3435 25.1144 0.0529 0.0821 0.0567 -0.0100 -0.0146 0.0215 1.3263 8.9638 7.8679 0.2732 -1.3608 7.2157 0.0363 -0.0281 0.0983 0.2530 -0.0829 0.2601 0.2415 -0.1307 0.0466 'X-RAY DIFFRACTION' 4 ? refined 2.6408 -3.7487 22.3853 0.0556 0.1409 0.0861 0.0371 -0.0169 0.0163 1.1712 7.5806 9.7752 -0.0964 -1.1516 8.1822 -0.0367 -0.0296 0.1467 0.0915 -0.1445 0.2938 0.1275 -0.1591 0.1812 'X-RAY DIFFRACTION' 5 ? refined 7.7003 -13.1635 7.1855 0.0797 0.0582 0.0744 -0.0250 -0.0211 -0.0001 3.0422 3.0014 5.8083 0.6646 -0.9513 1.3080 0.0284 0.0889 -0.3012 -0.0680 -0.0257 0.2171 0.3805 -0.3383 -0.0027 'X-RAY DIFFRACTION' 6 ? refined 13.6661 5.9328 14.0906 0.0233 0.0501 0.0219 -0.0014 -0.0022 0.0007 0.5621 2.7268 0.8014 0.6410 0.1108 0.1692 0.0215 -0.0348 0.0158 0.0095 -0.0549 0.0283 -0.0140 -0.0611 0.0334 'X-RAY DIFFRACTION' 7 ? refined 18.6073 26.3739 17.1219 0.1525 0.0371 0.0937 -0.0173 -0.0251 -0.0345 5.5731 10.2480 3.1536 2.4779 1.6517 -1.0161 -0.0513 -0.1043 0.1910 0.4679 -0.0864 -0.1084 -0.5851 0.1403 0.1377 'X-RAY DIFFRACTION' 8 ? refined 12.7483 13.2058 8.1942 0.0360 0.0467 0.0245 0.0051 0.0001 0.0017 0.8676 7.7209 0.6317 -0.9297 0.0261 0.2238 -0.0188 -0.0467 -0.0150 0.0300 0.0361 0.0915 -0.1067 -0.0466 -0.0172 'X-RAY DIFFRACTION' 9 ? refined 23.7863 -11.1682 9.9073 0.0580 0.0440 0.0196 0.0278 0.0075 0.0125 4.7816 6.5008 5.3623 -1.7081 1.1161 -1.8880 0.0014 0.0920 -0.1047 -0.0472 -0.1732 -0.1675 0.3751 0.4174 0.1718 'X-RAY DIFFRACTION' 10 ? refined 18.4076 13.9508 5.1407 0.0292 0.0487 0.0298 -0.0071 0.0069 0.0067 0.8784 2.9102 0.9192 -0.3554 0.2207 -0.4735 0.0386 -0.0129 0.0335 -0.0172 -0.0786 -0.0116 -0.0945 0.0238 0.0400 'X-RAY DIFFRACTION' 11 ? refined 24.4159 20.8106 5.6140 0.0330 0.0439 0.0283 -0.0127 -0.0121 -0.0011 3.4397 4.4693 4.0945 -1.2845 0.1506 -1.3930 0.0316 0.0737 0.1122 0.0620 -0.0016 0.0282 -0.1892 0.0341 -0.0300 'X-RAY DIFFRACTION' 12 ? refined 23.9001 11.6616 15.9681 0.0374 0.0539 0.0381 -0.0103 -0.0091 0.0080 1.5583 2.9690 2.9263 1.7312 -1.9661 -2.5638 0.0086 -0.0325 -0.0036 0.1149 -0.0457 -0.0923 -0.0809 0.0929 0.0371 'X-RAY DIFFRACTION' 13 ? refined 27.3960 3.8388 16.3814 0.0314 0.0575 0.0437 0.0005 0.0045 0.0111 4.2253 4.5821 1.9506 -2.5118 -0.5518 0.4658 0.0394 0.0349 0.0730 -0.1428 0.0163 -0.2078 -0.0201 0.1770 -0.0557 'X-RAY DIFFRACTION' 14 ? refined 25.0598 4.9844 6.6824 0.0509 0.0720 0.1043 -0.0033 -0.0017 -0.0134 1.6394 10.3600 6.8923 -4.0378 3.1066 -7.0074 0.1121 0.0995 0.0852 -0.1976 -0.1672 -0.2759 0.3138 0.3173 0.0550 'X-RAY DIFFRACTION' 15 ? refined 22.4187 14.6234 0.7112 0.0729 0.0859 0.0604 -0.0316 -0.0111 0.0240 9.5899 2.7435 2.5718 -4.1405 4.9155 -2.1613 -0.0248 0.2960 0.1199 0.0653 -0.0684 -0.1617 -0.0662 0.1982 0.0932 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.pdbx_refine_id 1 1 A 6 ? ? A 11 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 12 ? ? A 20 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 21 ? ? A 28 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 29 ? ? A 35 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 36 ? ? A 45 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 46 ? ? A 70 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 71 ? ? A 76 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 77 ? ? A 86 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 87 ? ? A 98 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 99 ? ? A 109 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 110 ? ? A 117 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 118 ? ? A 126 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 A 127 ? ? A 133 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 A 134 ? ? A 139 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 A 140 ? ? A 145 ? ? ? ? 'X-RAY DIFFRACTION' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 MOLREP phasing . ? 2 CCP4 'model building' . ? 3 REFMAC refinement 5.5.0054 ? 4 HKL-3000 'data reduction' . ? 5 HKL-3000 'data scaling' . ? 6 HKL-3000 phasing . ? 7 DM phasing . ? 8 ARP/wARP 'model building' . ? 9 CCP4 phasing . ? 10 Coot 'model building' . ? 11 # _pdbx_entry_details.sequence_details 'TARGET ID DOES NOT EXIST IN TARGETDB A THE TIME OF PROCESSING.' _pdbx_entry_details.entry_id 3EER _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 6 ? CG ? A MSE 9 CG 2 1 Y 1 A MSE 6 ? SE ? A MSE 9 SE 3 1 Y 1 A MSE 6 ? CE ? A MSE 9 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A ARG 2 ? A ARG 5 6 1 Y 1 A ASN 3 ? A ASN 6 7 1 Y 1 A LYS 4 ? A LYS 7 8 1 Y 1 A ASN 5 ? A ASN 8 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'ZINC ION' ZN 4 IMIDAZOLE IMD 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 1001 1001 ACT ACT A . C 2 ACT 1 1002 1002 ACT ACT A . D 2 ACT 1 1003 1003 ACT ACT A . E 2 ACT 1 1004 1004 ACT ACT A . F 2 ACT 1 1005 1005 ACT ACT A . G 2 ACT 1 1006 1006 ACT ACT A . H 2 ACT 1 1007 1007 ACT ACT A . I 3 ZN 1 2001 2001 ZN ZN A . J 3 ZN 1 2002 2002 ZN ZN A . K 3 ZN 1 2003 2003 ZN ZN A . L 3 ZN 1 2004 2004 ZN ZN A . M 3 ZN 1 2005 2005 ZN ZN A . N 3 ZN 1 2006 2006 ZN ZN A . O 4 IMD 1 3001 3001 IMD IMD A . P 5 HOH 1 3002 3002 HOH HOH A . P 5 HOH 2 3003 3003 HOH HOH A . P 5 HOH 3 3004 3004 HOH HOH A . P 5 HOH 4 3005 3005 HOH HOH A . P 5 HOH 5 3006 3006 HOH HOH A . P 5 HOH 6 3007 3007 HOH HOH A . P 5 HOH 7 3008 3008 HOH HOH A . P 5 HOH 8 3009 3009 HOH HOH A . P 5 HOH 9 3010 3010 HOH HOH A . P 5 HOH 10 3011 3011 HOH HOH A . P 5 HOH 11 3012 3012 HOH HOH A . P 5 HOH 12 3013 3013 HOH HOH A . P 5 HOH 13 3014 3014 HOH HOH A . P 5 HOH 14 3015 3015 HOH HOH A . P 5 HOH 15 3016 3016 HOH HOH A . P 5 HOH 16 3017 3017 HOH HOH A . P 5 HOH 17 3018 3018 HOH HOH A . P 5 HOH 18 3019 3019 HOH HOH A . P 5 HOH 19 3020 3020 HOH HOH A . P 5 HOH 20 3021 3021 HOH HOH A . P 5 HOH 21 3022 3022 HOH HOH A . P 5 HOH 22 3023 3023 HOH HOH A . P 5 HOH 23 3024 3024 HOH HOH A . P 5 HOH 24 3025 3025 HOH HOH A . P 5 HOH 25 3026 3026 HOH HOH A . P 5 HOH 26 3027 3027 HOH HOH A . P 5 HOH 27 3028 3028 HOH HOH A . P 5 HOH 28 3029 3029 HOH HOH A . P 5 HOH 29 3030 3030 HOH HOH A . P 5 HOH 30 3031 3031 HOH HOH A . P 5 HOH 31 3032 3032 HOH HOH A . P 5 HOH 32 3033 3033 HOH HOH A . P 5 HOH 33 3034 3034 HOH HOH A . P 5 HOH 34 3035 3035 HOH HOH A . P 5 HOH 35 3036 3036 HOH HOH A . P 5 HOH 36 3037 3037 HOH HOH A . P 5 HOH 37 3038 3038 HOH HOH A . P 5 HOH 38 3039 3039 HOH HOH A . P 5 HOH 39 3040 3040 HOH HOH A . P 5 HOH 40 3041 3041 HOH HOH A . P 5 HOH 41 3042 3042 HOH HOH A . P 5 HOH 42 3043 3043 HOH HOH A . P 5 HOH 43 3044 3044 HOH HOH A . P 5 HOH 44 3045 3045 HOH HOH A . P 5 HOH 45 3046 3046 HOH HOH A . P 5 HOH 46 3047 3047 HOH HOH A . P 5 HOH 47 3048 3048 HOH HOH A . P 5 HOH 48 3049 3049 HOH HOH A . P 5 HOH 49 3050 3050 HOH HOH A . P 5 HOH 50 3051 3051 HOH HOH A . P 5 HOH 51 3052 3052 HOH HOH A . P 5 HOH 52 3053 3053 HOH HOH A . P 5 HOH 53 3054 3054 HOH HOH A . P 5 HOH 54 3055 3055 HOH HOH A . P 5 HOH 55 3056 3056 HOH HOH A . P 5 HOH 56 3057 3057 HOH HOH A . P 5 HOH 57 3058 3058 HOH HOH A . P 5 HOH 58 3059 3059 HOH HOH A . P 5 HOH 59 3060 3060 HOH HOH A . P 5 HOH 60 3061 3061 HOH HOH A . P 5 HOH 61 3062 3062 HOH HOH A . P 5 HOH 62 3063 3063 HOH HOH A . P 5 HOH 63 3064 3064 HOH HOH A . P 5 HOH 64 3065 3065 HOH HOH A . P 5 HOH 65 3066 3066 HOH HOH A . P 5 HOH 66 3067 3067 HOH HOH A . P 5 HOH 67 3068 3068 HOH HOH A . P 5 HOH 68 3069 3069 HOH HOH A . P 5 HOH 69 3070 3070 HOH HOH A . P 5 HOH 70 3071 3071 HOH HOH A . P 5 HOH 71 3072 3072 HOH HOH A . P 5 HOH 72 3073 3073 HOH HOH A . P 5 HOH 73 3074 3074 HOH HOH A . P 5 HOH 74 3075 3075 HOH HOH A . P 5 HOH 75 3076 3076 HOH HOH A . P 5 HOH 76 3077 3077 HOH HOH A . P 5 HOH 77 3078 3078 HOH HOH A . P 5 HOH 78 3079 3079 HOH HOH A . P 5 HOH 79 3080 3080 HOH HOH A . P 5 HOH 80 3081 3081 HOH HOH A . P 5 HOH 81 3082 3082 HOH HOH A . P 5 HOH 82 3083 3083 HOH HOH A . P 5 HOH 83 3084 3084 HOH HOH A . P 5 HOH 84 3085 3085 HOH HOH A . P 5 HOH 85 3086 3086 HOH HOH A . P 5 HOH 86 3087 3087 HOH HOH A . P 5 HOH 87 3088 3088 HOH HOH A . P 5 HOH 88 3089 3089 HOH HOH A . P 5 HOH 89 3090 3090 HOH HOH A . P 5 HOH 90 3091 3091 HOH HOH A . P 5 HOH 91 3092 3092 HOH HOH A . P 5 HOH 92 3093 3093 HOH HOH A . P 5 HOH 93 3094 3094 HOH HOH A . P 5 HOH 94 3095 3095 HOH HOH A . P 5 HOH 95 3096 3096 HOH HOH A . P 5 HOH 96 3097 3097 HOH HOH A . P 5 HOH 97 3098 3098 HOH HOH A . P 5 HOH 98 3099 3099 HOH HOH A . P 5 HOH 99 3100 3100 HOH HOH A . P 5 HOH 100 3101 3101 HOH HOH A . P 5 HOH 101 3102 3102 HOH HOH A . P 5 HOH 102 3103 3103 HOH HOH A . P 5 HOH 103 3104 3104 HOH HOH A . P 5 HOH 104 3105 3105 HOH HOH A . P 5 HOH 105 3106 3106 HOH HOH A . P 5 HOH 106 3107 3107 HOH HOH A . P 5 HOH 107 3108 3108 HOH HOH A . P 5 HOH 108 3109 3109 HOH HOH A . P 5 HOH 109 3110 3110 HOH HOH A . P 5 HOH 110 3111 3111 HOH HOH A . P 5 HOH 111 3112 3112 HOH HOH A . P 5 HOH 112 3113 3113 HOH HOH A . P 5 HOH 113 3114 3114 HOH HOH A . P 5 HOH 114 3115 3115 HOH HOH A . P 5 HOH 115 3116 3116 HOH HOH A . P 5 HOH 116 3117 3117 HOH HOH A . P 5 HOH 117 3118 3118 HOH HOH A . P 5 HOH 118 3119 3119 HOH HOH A . P 5 HOH 119 3120 3120 HOH HOH A . P 5 HOH 120 3121 3121 HOH HOH A . P 5 HOH 121 3122 3122 HOH HOH A . P 5 HOH 122 3123 3123 HOH HOH A . P 5 HOH 123 3124 3124 HOH HOH A . P 5 HOH 124 3125 3125 HOH HOH A . P 5 HOH 125 3126 3126 HOH HOH A . P 5 HOH 126 3127 3127 HOH HOH A . P 5 HOH 127 3128 3128 HOH HOH A . P 5 HOH 128 3129 3129 HOH HOH A . P 5 HOH 129 3130 3130 HOH HOH A . P 5 HOH 130 3131 3131 HOH HOH A . P 5 HOH 131 3132 3132 HOH HOH A . P 5 HOH 132 3133 3133 HOH HOH A . P 5 HOH 133 3134 3134 HOH HOH A . P 5 HOH 134 3135 3135 HOH HOH A . P 5 HOH 135 3136 3136 HOH HOH A . P 5 HOH 136 3137 3137 HOH HOH A . P 5 HOH 137 3138 3138 HOH HOH A . P 5 HOH 138 3139 3139 HOH HOH A . P 5 HOH 139 3140 3140 HOH HOH A . P 5 HOH 140 3141 3141 HOH HOH A . P 5 HOH 141 3142 3142 HOH HOH A . P 5 HOH 142 3143 3143 HOH HOH A . P 5 HOH 143 3144 3144 HOH HOH A . P 5 HOH 144 3145 3145 HOH HOH A . P 5 HOH 145 3146 3146 HOH HOH A . P 5 HOH 146 3147 3147 HOH HOH A . P 5 HOH 147 3148 3148 HOH HOH A . P 5 HOH 148 3149 3149 HOH HOH A . P 5 HOH 149 3150 3150 HOH HOH A . P 5 HOH 150 3151 3151 HOH HOH A . P 5 HOH 151 3152 3152 HOH HOH A . P 5 HOH 152 3153 3153 HOH HOH A . P 5 HOH 153 3154 3154 HOH HOH A . P 5 HOH 154 3155 3155 HOH HOH A . P 5 HOH 155 3156 3156 HOH HOH A . P 5 HOH 156 3157 3157 HOH HOH A . P 5 HOH 157 3158 3158 HOH HOH A . P 5 HOH 158 3159 3159 HOH HOH A . P 5 HOH 159 3160 3160 HOH HOH A . P 5 HOH 160 3161 3161 HOH HOH A . P 5 HOH 161 3162 3162 HOH HOH A . P 5 HOH 162 3163 3163 HOH HOH A . P 5 HOH 163 3164 3164 HOH HOH A . P 5 HOH 164 3165 3165 HOH HOH A . P 5 HOH 165 3166 3166 HOH HOH A . P 5 HOH 166 3167 3167 HOH HOH A . P 5 HOH 167 3168 3168 HOH HOH A . P 5 HOH 168 3169 3169 HOH HOH A . P 5 HOH 169 3170 3170 HOH HOH A . P 5 HOH 170 3171 3171 HOH HOH A . P 5 HOH 171 3172 3172 HOH HOH A . P 5 HOH 172 3173 3173 HOH HOH A . P 5 HOH 173 3174 3174 HOH HOH A . P 5 HOH 174 3175 3175 HOH HOH A . P 5 HOH 175 3176 3176 HOH HOH A . P 5 HOH 176 3177 3177 HOH HOH A . P 5 HOH 177 3178 3178 HOH HOH A . P 5 HOH 178 3179 3179 HOH HOH A . P 5 HOH 179 3180 3180 HOH HOH A . P 5 HOH 180 3181 3181 HOH HOH A . P 5 HOH 181 3182 3182 HOH HOH A . P 5 HOH 182 3183 3183 HOH HOH A . #