data_3EMT # _entry.id 3EMT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EMT pdb_00003emt 10.2210/pdb3emt/pdb RCSB RCSB049519 ? ? WWPDB D_1000049519 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2B8P _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3EMT _pdbx_database_status.recvd_initial_deposition_date 2008-09-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jeudy, S.' 1 'Lartigue, A.' 2 'Claverie, J.M.' 3 'Abergel, C.' 4 # _citation.id primary _citation.title 'Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.' _citation.journal_abbrev J.Virol. _citation.journal_volume 83 _citation.page_first 7142 _citation.page_last 7150 _citation.year 2009 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19439473 _citation.pdbx_database_id_DOI 10.1128/JVI.00511-09 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jeudy, S.' 1 ? primary 'Lartigue, A.' 2 ? primary 'Claverie, J.M.' 3 ? primary 'Abergel, C.' 4 ? # _cell.entry_id 3EMT _cell.length_a 70.212 _cell.length_b 70.212 _cell.length_c 104.668 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EMT _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleoside diphosphate kinase' 16528.648 2 2.7.4.6 '+Kpn, R107G' ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn "2'-DEOXYGUANOSINE-5'-DIPHOSPHATE" 427.201 2 ? ? ? ? 4 water nat water 18.015 184 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NDP kinase, NDK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;YKKAGLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIV YEGTDAISKIRRLQGNTNPLASAPGTIRGDLANDIGENLIHASDSEDSAVDEISIWFPETKMETDN ; _entity_poly.pdbx_seq_one_letter_code_can ;YKKAGLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIV YEGTDAISKIRRLQGNTNPLASAPGTIRGDLANDIGENLIHASDSEDSAVDEISIWFPETKMETDN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 LYS n 1 3 LYS n 1 4 ALA n 1 5 GLY n 1 6 LEU n 1 7 GLN n 1 8 ARG n 1 9 THR n 1 10 LEU n 1 11 VAL n 1 12 LEU n 1 13 ILE n 1 14 LYS n 1 15 PRO n 1 16 ASP n 1 17 ALA n 1 18 PHE n 1 19 GLU n 1 20 ARG n 1 21 SER n 1 22 LEU n 1 23 VAL n 1 24 ALA n 1 25 GLU n 1 26 ILE n 1 27 MET n 1 28 GLY n 1 29 ARG n 1 30 ILE n 1 31 GLU n 1 32 LYS n 1 33 LYS n 1 34 ASN n 1 35 PHE n 1 36 LYS n 1 37 ILE n 1 38 VAL n 1 39 SER n 1 40 MET n 1 41 LYS n 1 42 PHE n 1 43 TRP n 1 44 SER n 1 45 LYS n 1 46 ALA n 1 47 PRO n 1 48 ARG n 1 49 ASN n 1 50 LEU n 1 51 ILE n 1 52 GLU n 1 53 GLN n 1 54 HIS n 1 55 TYR n 1 56 LYS n 1 57 GLU n 1 58 HIS n 1 59 SER n 1 60 GLU n 1 61 GLN n 1 62 SER n 1 63 TYR n 1 64 PHE n 1 65 ASN n 1 66 ASP n 1 67 ASN n 1 68 CYS n 1 69 ASP n 1 70 PHE n 1 71 MET n 1 72 VAL n 1 73 SER n 1 74 GLY n 1 75 PRO n 1 76 ILE n 1 77 ILE n 1 78 SER n 1 79 ILE n 1 80 VAL n 1 81 TYR n 1 82 GLU n 1 83 GLY n 1 84 THR n 1 85 ASP n 1 86 ALA n 1 87 ILE n 1 88 SER n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 ARG n 1 93 LEU n 1 94 GLN n 1 95 GLY n 1 96 ASN n 1 97 THR n 1 98 ASN n 1 99 PRO n 1 100 LEU n 1 101 ALA n 1 102 SER n 1 103 ALA n 1 104 PRO n 1 105 GLY n 1 106 THR n 1 107 ILE n 1 108 ARG n 1 109 GLY n 1 110 ASP n 1 111 LEU n 1 112 ALA n 1 113 ASN n 1 114 ASP n 1 115 ILE n 1 116 GLY n 1 117 GLU n 1 118 ASN n 1 119 LEU n 1 120 ILE n 1 121 HIS n 1 122 ALA n 1 123 SER n 1 124 ASP n 1 125 SER n 1 126 GLU n 1 127 ASP n 1 128 SER n 1 129 ALA n 1 130 VAL n 1 131 ASP n 1 132 GLU n 1 133 ILE n 1 134 SER n 1 135 ILE n 1 136 TRP n 1 137 PHE n 1 138 PRO n 1 139 GLU n 1 140 THR n 1 141 LYS n 1 142 MET n 1 143 GLU n 1 144 THR n 1 145 ASP n 1 146 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MIMI_R418, NDK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acanthamoeba polyphaga mimivirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 212035 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'rosetta(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDIGS02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NDK_MIMIV _struct_ref.pdbx_db_accession Q5UQL3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIVYEGTDA ISKIRRLQGNILTPGTIRGDLANDIRENLIHASDSEDSAVDEISIWFPETKMETDN ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EMT A 7 ? 146 ? Q5UQL3 2 ? 137 ? 2 141 2 1 3EMT B 7 ? 146 ? Q5UQL3 2 ? 137 ? 2 141 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EMT TYR A 1 ? UNP Q5UQL3 ? ? 'expression tag' -4 1 1 3EMT LYS A 2 ? UNP Q5UQL3 ? ? 'expression tag' -3 2 1 3EMT LYS A 3 ? UNP Q5UQL3 ? ? 'expression tag' -2 3 1 3EMT ALA A 4 ? UNP Q5UQL3 ? ? 'expression tag' -1 4 1 3EMT GLY A 5 ? UNP Q5UQL3 ? ? 'expression tag' 0 5 1 3EMT LEU A 6 ? UNP Q5UQL3 ? ? 'expression tag' 1 6 1 3EMT THR A 97 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 92 7 1 3EMT ASN A 98 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 93 8 1 3EMT PRO A 99 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 94 9 1 3EMT LEU A 100 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 95 10 1 3EMT ALA A 101 ? UNP Q5UQL3 ILE 92 'SEE REMARK 999' 96 11 1 3EMT SER A 102 ? UNP Q5UQL3 LEU 93 'SEE REMARK 999' 97 12 1 3EMT ALA A 103 ? UNP Q5UQL3 THR 94 'SEE REMARK 999' 98 13 1 3EMT GLY A 116 ? UNP Q5UQL3 ARG 107 'engineered mutation' 111 14 2 3EMT TYR B 1 ? UNP Q5UQL3 ? ? 'expression tag' -4 15 2 3EMT LYS B 2 ? UNP Q5UQL3 ? ? 'expression tag' -3 16 2 3EMT LYS B 3 ? UNP Q5UQL3 ? ? 'expression tag' -2 17 2 3EMT ALA B 4 ? UNP Q5UQL3 ? ? 'expression tag' -1 18 2 3EMT GLY B 5 ? UNP Q5UQL3 ? ? 'expression tag' 0 19 2 3EMT LEU B 6 ? UNP Q5UQL3 ? ? 'expression tag' 1 20 2 3EMT THR B 97 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 92 21 2 3EMT ASN B 98 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 93 22 2 3EMT PRO B 99 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 94 23 2 3EMT LEU B 100 ? UNP Q5UQL3 ? ? 'SEE REMARK 999' 95 24 2 3EMT ALA B 101 ? UNP Q5UQL3 ILE 92 'SEE REMARK 999' 96 25 2 3EMT SER B 102 ? UNP Q5UQL3 LEU 93 'SEE REMARK 999' 97 26 2 3EMT ALA B 103 ? UNP Q5UQL3 THR 94 'SEE REMARK 999' 98 27 2 3EMT GLY B 116 ? UNP Q5UQL3 ARG 107 'engineered mutation' 111 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DGI 'DNA linking' n "2'-DEOXYGUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3EMT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.pdbx_details '0.8 to 1.1M Sodium Citrate, 0.1M Tris, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2007-09-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Diamond (111), Ge(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.934 # _reflns.entry_id 3EMT _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.8 _reflns.d_resolution_high 1.6 _reflns.number_obs 38246 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.B_iso_Wilson_estimate 16.685 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.310 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5578 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3EMT _refine.ls_d_res_high 1.600 _refine.ls_d_res_low 60.806 _refine.pdbx_ls_sigma_F 1.86 _refine.ls_percent_reflns_obs 99.280 _refine.ls_number_reflns_obs 38246 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_R_work 0.173 _refine.ls_R_factor_R_free 0.197 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1914 _refine.ls_number_reflns_R_work 36332 _refine.B_iso_mean 16.905 _refine.solvent_model_param_bsol 56.187 _refine.solvent_model_param_ksol 0.405 _refine.aniso_B[1][1] -0.103 _refine.aniso_B[2][2] -0.103 _refine.aniso_B[3][3] 0.206 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.overall_SU_ML 0.170 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2B8P _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.B_iso_max 55.16 _refine.B_iso_min 6.36 _refine.pdbx_overall_phase_error 17.840 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_ion_probe_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2113 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 184 _refine_hist.number_atoms_total 2353 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 60.806 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2213 0.006 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3001 1.142 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 325 0.069 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 383 0.004 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 827 19.039 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.600 1.640 14 99.000 2598 . 0.181 0.219 . 113 . 2711 . 'X-RAY DIFFRACTION' . 1.640 1.684 14 100.000 2594 . 0.182 0.223 . 134 . 2728 . 'X-RAY DIFFRACTION' . 1.684 1.734 14 100.000 2608 . 0.174 0.208 . 137 . 2745 . 'X-RAY DIFFRACTION' . 1.734 1.790 14 100.000 2618 . 0.164 0.204 . 131 . 2749 . 'X-RAY DIFFRACTION' . 1.790 1.854 14 100.000 2601 . 0.169 0.190 . 137 . 2738 . 'X-RAY DIFFRACTION' . 1.854 1.928 14 100.000 2594 . 0.166 0.174 . 132 . 2726 . 'X-RAY DIFFRACTION' . 1.928 2.016 14 100.000 2628 . 0.164 0.199 . 130 . 2758 . 'X-RAY DIFFRACTION' . 2.016 2.122 14 100.000 2582 . 0.164 0.190 . 139 . 2721 . 'X-RAY DIFFRACTION' . 2.122 2.255 14 100.000 2595 . 0.159 0.191 . 151 . 2746 . 'X-RAY DIFFRACTION' . 2.255 2.429 14 99.000 2596 . 0.169 0.204 . 141 . 2737 . 'X-RAY DIFFRACTION' . 2.429 2.674 14 99.000 2560 . 0.179 0.209 . 154 . 2714 . 'X-RAY DIFFRACTION' . 2.674 3.060 14 99.000 2604 . 0.177 0.191 . 135 . 2739 . 'X-RAY DIFFRACTION' . 3.060 3.856 14 98.000 2573 . 0.156 0.190 . 139 . 2712 . 'X-RAY DIFFRACTION' . 3.856 60.850 14 97.000 2581 . 0.187 0.186 . 141 . 2722 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3EMT _struct.title 'Crystal structure of the mimivirus NDK +Kpn-R107G double mutant complexed with dGDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EMT _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;phosphotransferase, nucleotide binding, ATP-binding, Kinase, Magnesium, Metal-binding, Nucleotide metabolism, Nucleotide-binding, Phosphoprotein, Transferase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 14 ? ARG A 20 ? LYS A 9 ARG A 15 1 ? 7 HELX_P HELX_P2 2 LEU A 22 ? LYS A 32 ? LEU A 17 LYS A 27 1 ? 11 HELX_P HELX_P3 3 PRO A 47 ? TYR A 55 ? PRO A 42 TYR A 50 1 ? 9 HELX_P HELX_P4 4 LYS A 56 ? SER A 59 ? LYS A 51 SER A 54 5 ? 4 HELX_P HELX_P5 5 TYR A 63 ? VAL A 72 ? TYR A 58 VAL A 67 1 ? 10 HELX_P HELX_P6 6 ASP A 85 ? GLY A 95 ? ASP A 80 GLY A 90 1 ? 11 HELX_P HELX_P7 7 THR A 106 ? ALA A 112 ? THR A 101 ALA A 107 1 ? 7 HELX_P HELX_P8 8 SER A 125 ? PHE A 137 ? SER A 120 PHE A 132 1 ? 13 HELX_P HELX_P9 9 LYS B 14 ? ARG B 20 ? LYS B 9 ARG B 15 1 ? 7 HELX_P HELX_P10 10 LEU B 22 ? LYS B 32 ? LEU B 17 LYS B 27 1 ? 11 HELX_P HELX_P11 11 PRO B 47 ? TYR B 55 ? PRO B 42 TYR B 50 1 ? 9 HELX_P HELX_P12 12 LYS B 56 ? SER B 59 ? LYS B 51 SER B 54 5 ? 4 HELX_P HELX_P13 13 TYR B 63 ? VAL B 72 ? TYR B 58 VAL B 67 1 ? 10 HELX_P HELX_P14 14 ASP B 85 ? GLY B 95 ? ASP B 80 GLY B 90 1 ? 11 HELX_P HELX_P15 15 THR B 106 ? ALA B 112 ? THR B 101 ALA B 107 1 ? 7 HELX_P HELX_P16 16 SER B 125 ? PHE B 137 ? SER B 120 PHE B 132 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? D DGI . O2B ? ? ? 1_555 C MG . MG ? ? A DGI 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc2 metalc ? ? D DGI . O2A ? ? ? 1_555 C MG . MG ? ? A DGI 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 202 A HOH 233 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc4 metalc ? ? F DGI . O1A ? ? ? 1_555 E MG . MG ? ? B DGI 201 B MG 202 1_555 ? ? ? ? ? ? ? 2.224 ? ? metalc5 metalc ? ? F DGI . O2B ? ? ? 1_555 E MG . MG ? ? B DGI 201 B MG 202 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 202 B HOH 224 1_555 ? ? ? ? ? ? ? 2.397 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 36 ? TRP A 43 ? LYS A 31 TRP A 38 A 2 ILE A 76 ? GLU A 82 ? ILE A 71 GLU A 77 A 3 ARG A 8 ? ILE A 13 ? ARG A 3 ILE A 8 A 4 ILE A 120 ? ALA A 122 ? ILE A 115 ALA A 117 B 1 LYS B 36 ? TRP B 43 ? LYS B 31 TRP B 38 B 2 ILE B 76 ? GLY B 83 ? ILE B 71 GLY B 78 B 3 GLN B 7 ? ILE B 13 ? GLN B 2 ILE B 8 B 4 ILE B 120 ? ALA B 122 ? ILE B 115 ALA B 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 43 ? N TRP A 38 O ILE A 76 ? O ILE A 71 A 2 3 O ILE A 79 ? O ILE A 74 N VAL A 11 ? N VAL A 6 A 3 4 N LEU A 12 ? N LEU A 7 O HIS A 121 ? O HIS A 116 B 1 2 N TRP B 43 ? N TRP B 38 O ILE B 76 ? O ILE B 71 B 2 3 O ILE B 79 ? O ILE B 74 N VAL B 11 ? N VAL B 6 B 3 4 N LEU B 12 ? N LEU B 7 O HIS B 121 ? O HIS B 116 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 202 ? 3 'BINDING SITE FOR RESIDUE MG A 202' AC2 Software A DGI 201 ? 18 'BINDING SITE FOR RESIDUE DGI A 201' AC3 Software B MG 202 ? 3 'BINDING SITE FOR RESIDUE MG B 202' AC4 Software B DGI 201 ? 16 'BINDING SITE FOR RESIDUE DGI B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DGI D . ? DGI A 201 . ? 1_555 ? 2 AC1 3 HOH G . ? HOH A 233 . ? 1_555 ? 3 AC1 3 HOH G . ? HOH A 236 . ? 1_555 ? 4 AC2 18 LYS A 14 ? LYS A 9 . ? 1_555 ? 5 AC2 18 TYR A 55 ? TYR A 50 . ? 1_555 ? 6 AC2 18 HIS A 58 ? HIS A 53 . ? 1_555 ? 7 AC2 18 TYR A 63 ? TYR A 58 . ? 1_555 ? 8 AC2 18 ARG A 91 ? ARG A 86 . ? 1_555 ? 9 AC2 18 THR A 97 ? THR A 92 . ? 1_555 ? 10 AC2 18 ARG A 108 ? ARG A 103 . ? 1_555 ? 11 AC2 18 ILE A 115 ? ILE A 110 . ? 1_555 ? 12 AC2 18 ASN A 118 ? ASN A 113 . ? 1_555 ? 13 AC2 18 MG C . ? MG A 202 . ? 1_555 ? 14 AC2 18 HOH G . ? HOH A 213 . ? 1_555 ? 15 AC2 18 HOH G . ? HOH A 229 . ? 1_555 ? 16 AC2 18 HOH G . ? HOH A 232 . ? 1_555 ? 17 AC2 18 HOH G . ? HOH A 236 . ? 1_555 ? 18 AC2 18 HOH G . ? HOH A 242 . ? 1_555 ? 19 AC2 18 HOH G . ? HOH A 252 . ? 1_555 ? 20 AC2 18 HOH G . ? HOH A 280 . ? 1_555 ? 21 AC2 18 HOH G . ? HOH A 282 . ? 1_555 ? 22 AC3 3 DGI F . ? DGI B 201 . ? 1_555 ? 23 AC3 3 HOH H . ? HOH B 224 . ? 1_555 ? 24 AC3 3 HOH H . ? HOH B 269 . ? 1_555 ? 25 AC4 16 LYS B 14 ? LYS B 9 . ? 1_555 ? 26 AC4 16 TYR B 55 ? TYR B 50 . ? 1_555 ? 27 AC4 16 HIS B 58 ? HIS B 53 . ? 1_555 ? 28 AC4 16 TYR B 63 ? TYR B 58 . ? 1_555 ? 29 AC4 16 ARG B 91 ? ARG B 86 . ? 1_555 ? 30 AC4 16 THR B 97 ? THR B 92 . ? 1_555 ? 31 AC4 16 ARG B 108 ? ARG B 103 . ? 1_555 ? 32 AC4 16 ILE B 115 ? ILE B 110 . ? 1_555 ? 33 AC4 16 ASN B 118 ? ASN B 113 . ? 1_555 ? 34 AC4 16 MG E . ? MG B 202 . ? 1_555 ? 35 AC4 16 HOH H . ? HOH B 205 . ? 1_555 ? 36 AC4 16 HOH H . ? HOH B 211 . ? 1_555 ? 37 AC4 16 HOH H . ? HOH B 265 . ? 1_555 ? 38 AC4 16 HOH H . ? HOH B 269 . ? 1_555 ? 39 AC4 16 HOH H . ? HOH B 274 . ? 1_555 ? 40 AC4 16 HOH H . ? HOH B 278 . ? 1_555 ? # _database_PDB_matrix.entry_id 3EMT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3EMT _atom_sites.fract_transf_matrix[1][1] 0.014242 _atom_sites.fract_transf_matrix[1][2] 0.008223 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016446 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009554 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 -4 ? ? ? A . n A 1 2 LYS 2 -3 ? ? ? A . n A 1 3 LYS 3 -2 ? ? ? A . n A 1 4 ALA 4 -1 ? ? ? A . n A 1 5 GLY 5 0 ? ? ? A . n A 1 6 LEU 6 1 ? ? ? A . n A 1 7 GLN 7 2 2 GLN GLN A . n A 1 8 ARG 8 3 3 ARG ARG A . n A 1 9 THR 9 4 4 THR THR A . n A 1 10 LEU 10 5 5 LEU LEU A . n A 1 11 VAL 11 6 6 VAL VAL A . n A 1 12 LEU 12 7 7 LEU LEU A . n A 1 13 ILE 13 8 8 ILE ILE A . n A 1 14 LYS 14 9 9 LYS LYS A . n A 1 15 PRO 15 10 10 PRO PRO A . n A 1 16 ASP 16 11 11 ASP ASP A . n A 1 17 ALA 17 12 12 ALA ALA A . n A 1 18 PHE 18 13 13 PHE PHE A . n A 1 19 GLU 19 14 14 GLU GLU A . n A 1 20 ARG 20 15 15 ARG ARG A . n A 1 21 SER 21 16 16 SER SER A . n A 1 22 LEU 22 17 17 LEU LEU A . n A 1 23 VAL 23 18 18 VAL VAL A . n A 1 24 ALA 24 19 19 ALA ALA A . n A 1 25 GLU 25 20 20 GLU GLU A . n A 1 26 ILE 26 21 21 ILE ILE A . n A 1 27 MET 27 22 22 MET MET A . n A 1 28 GLY 28 23 23 GLY GLY A . n A 1 29 ARG 29 24 24 ARG ARG A . n A 1 30 ILE 30 25 25 ILE ILE A . n A 1 31 GLU 31 26 26 GLU GLU A . n A 1 32 LYS 32 27 27 LYS LYS A . n A 1 33 LYS 33 28 28 LYS LYS A . n A 1 34 ASN 34 29 29 ASN ASN A . n A 1 35 PHE 35 30 30 PHE PHE A . n A 1 36 LYS 36 31 31 LYS LYS A . n A 1 37 ILE 37 32 32 ILE ILE A . n A 1 38 VAL 38 33 33 VAL VAL A . n A 1 39 SER 39 34 34 SER SER A . n A 1 40 MET 40 35 35 MET MET A . n A 1 41 LYS 41 36 36 LYS LYS A . n A 1 42 PHE 42 37 37 PHE PHE A . n A 1 43 TRP 43 38 38 TRP TRP A . n A 1 44 SER 44 39 39 SER SER A . n A 1 45 LYS 45 40 40 LYS LYS A . n A 1 46 ALA 46 41 41 ALA ALA A . n A 1 47 PRO 47 42 42 PRO PRO A . n A 1 48 ARG 48 43 43 ARG ARG A . n A 1 49 ASN 49 44 44 ASN ASN A . n A 1 50 LEU 50 45 45 LEU LEU A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 GLU 52 47 47 GLU GLU A . n A 1 53 GLN 53 48 48 GLN GLN A . n A 1 54 HIS 54 49 49 HIS HIS A . n A 1 55 TYR 55 50 50 TYR TYR A . n A 1 56 LYS 56 51 51 LYS LYS A . n A 1 57 GLU 57 52 52 GLU GLU A . n A 1 58 HIS 58 53 53 HIS HIS A . n A 1 59 SER 59 54 54 SER SER A . n A 1 60 GLU 60 55 55 GLU GLU A . n A 1 61 GLN 61 56 56 GLN GLN A . n A 1 62 SER 62 57 57 SER SER A . n A 1 63 TYR 63 58 58 TYR TYR A . n A 1 64 PHE 64 59 59 PHE PHE A . n A 1 65 ASN 65 60 60 ASN ASN A . n A 1 66 ASP 66 61 61 ASP ASP A . n A 1 67 ASN 67 62 62 ASN ASN A . n A 1 68 CYS 68 63 63 CYS CYS A . n A 1 69 ASP 69 64 64 ASP ASP A . n A 1 70 PHE 70 65 65 PHE PHE A . n A 1 71 MET 71 66 66 MET MET A . n A 1 72 VAL 72 67 67 VAL VAL A . n A 1 73 SER 73 68 68 SER SER A . n A 1 74 GLY 74 69 69 GLY GLY A . n A 1 75 PRO 75 70 70 PRO PRO A . n A 1 76 ILE 76 71 71 ILE ILE A . n A 1 77 ILE 77 72 72 ILE ILE A . n A 1 78 SER 78 73 73 SER SER A . n A 1 79 ILE 79 74 74 ILE ILE A . n A 1 80 VAL 80 75 75 VAL VAL A . n A 1 81 TYR 81 76 76 TYR TYR A . n A 1 82 GLU 82 77 77 GLU GLU A . n A 1 83 GLY 83 78 78 GLY GLY A . n A 1 84 THR 84 79 79 THR THR A . n A 1 85 ASP 85 80 80 ASP ASP A . n A 1 86 ALA 86 81 81 ALA ALA A . n A 1 87 ILE 87 82 82 ILE ILE A . n A 1 88 SER 88 83 83 SER SER A . n A 1 89 LYS 89 84 84 LYS LYS A . n A 1 90 ILE 90 85 85 ILE ILE A . n A 1 91 ARG 91 86 86 ARG ARG A . n A 1 92 ARG 92 87 87 ARG ARG A . n A 1 93 LEU 93 88 88 LEU LEU A . n A 1 94 GLN 94 89 89 GLN GLN A . n A 1 95 GLY 95 90 90 GLY GLY A . n A 1 96 ASN 96 91 91 ASN ASN A . n A 1 97 THR 97 92 92 THR THR A . n A 1 98 ASN 98 93 93 ASN ASN A . n A 1 99 PRO 99 94 94 PRO PRO A . n A 1 100 LEU 100 95 95 LEU LEU A . n A 1 101 ALA 101 96 96 ALA ALA A . n A 1 102 SER 102 97 97 SER SER A . n A 1 103 ALA 103 98 98 ALA ALA A . n A 1 104 PRO 104 99 99 PRO PRO A . n A 1 105 GLY 105 100 100 GLY GLY A . n A 1 106 THR 106 101 101 THR THR A . n A 1 107 ILE 107 102 102 ILE ILE A . n A 1 108 ARG 108 103 103 ARG ARG A . n A 1 109 GLY 109 104 104 GLY GLY A . n A 1 110 ASP 110 105 105 ASP ASP A . n A 1 111 LEU 111 106 106 LEU LEU A . n A 1 112 ALA 112 107 107 ALA ALA A . n A 1 113 ASN 113 108 108 ASN ASN A . n A 1 114 ASP 114 109 109 ASP ASP A . n A 1 115 ILE 115 110 110 ILE ILE A . n A 1 116 GLY 116 111 111 GLY GLY A . n A 1 117 GLU 117 112 112 GLU GLU A . n A 1 118 ASN 118 113 113 ASN ASN A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 ILE 120 115 115 ILE ILE A . n A 1 121 HIS 121 116 116 HIS HIS A . n A 1 122 ALA 122 117 117 ALA ALA A . n A 1 123 SER 123 118 118 SER SER A . n A 1 124 ASP 124 119 119 ASP ASP A . n A 1 125 SER 125 120 120 SER SER A . n A 1 126 GLU 126 121 121 GLU GLU A . n A 1 127 ASP 127 122 122 ASP ASP A . n A 1 128 SER 128 123 123 SER SER A . n A 1 129 ALA 129 124 124 ALA ALA A . n A 1 130 VAL 130 125 125 VAL VAL A . n A 1 131 ASP 131 126 126 ASP ASP A . n A 1 132 GLU 132 127 127 GLU GLU A . n A 1 133 ILE 133 128 128 ILE ILE A . n A 1 134 SER 134 129 129 SER SER A . n A 1 135 ILE 135 130 130 ILE ILE A . n A 1 136 TRP 136 131 131 TRP TRP A . n A 1 137 PHE 137 132 132 PHE PHE A . n A 1 138 PRO 138 133 133 PRO PRO A . n A 1 139 GLU 139 134 134 GLU GLU A . n A 1 140 THR 140 135 ? ? ? A . n A 1 141 LYS 141 136 ? ? ? A . n A 1 142 MET 142 137 ? ? ? A . n A 1 143 GLU 143 138 ? ? ? A . n A 1 144 THR 144 139 ? ? ? A . n A 1 145 ASP 145 140 ? ? ? A . n A 1 146 ASN 146 141 ? ? ? A . n B 1 1 TYR 1 -4 ? ? ? B . n B 1 2 LYS 2 -3 ? ? ? B . n B 1 3 LYS 3 -2 ? ? ? B . n B 1 4 ALA 4 -1 ? ? ? B . n B 1 5 GLY 5 0 ? ? ? B . n B 1 6 LEU 6 1 1 LEU LEU B . n B 1 7 GLN 7 2 2 GLN GLN B . n B 1 8 ARG 8 3 3 ARG ARG B . n B 1 9 THR 9 4 4 THR THR B . n B 1 10 LEU 10 5 5 LEU LEU B . n B 1 11 VAL 11 6 6 VAL VAL B . n B 1 12 LEU 12 7 7 LEU LEU B . n B 1 13 ILE 13 8 8 ILE ILE B . n B 1 14 LYS 14 9 9 LYS LYS B . n B 1 15 PRO 15 10 10 PRO PRO B . n B 1 16 ASP 16 11 11 ASP ASP B . n B 1 17 ALA 17 12 12 ALA ALA B . n B 1 18 PHE 18 13 13 PHE PHE B . n B 1 19 GLU 19 14 14 GLU GLU B . n B 1 20 ARG 20 15 15 ARG ARG B . n B 1 21 SER 21 16 16 SER SER B . n B 1 22 LEU 22 17 17 LEU LEU B . n B 1 23 VAL 23 18 18 VAL VAL B . n B 1 24 ALA 24 19 19 ALA ALA B . n B 1 25 GLU 25 20 20 GLU GLU B . n B 1 26 ILE 26 21 21 ILE ILE B . n B 1 27 MET 27 22 22 MET MET B . n B 1 28 GLY 28 23 23 GLY GLY B . n B 1 29 ARG 29 24 24 ARG ARG B . n B 1 30 ILE 30 25 25 ILE ILE B . n B 1 31 GLU 31 26 26 GLU GLU B . n B 1 32 LYS 32 27 27 LYS LYS B . n B 1 33 LYS 33 28 28 LYS LYS B . n B 1 34 ASN 34 29 29 ASN ASN B . n B 1 35 PHE 35 30 30 PHE PHE B . n B 1 36 LYS 36 31 31 LYS LYS B . n B 1 37 ILE 37 32 32 ILE ILE B . n B 1 38 VAL 38 33 33 VAL VAL B . n B 1 39 SER 39 34 34 SER SER B . n B 1 40 MET 40 35 35 MET MET B . n B 1 41 LYS 41 36 36 LYS LYS B . n B 1 42 PHE 42 37 37 PHE PHE B . n B 1 43 TRP 43 38 38 TRP TRP B . n B 1 44 SER 44 39 39 SER SER B . n B 1 45 LYS 45 40 40 LYS LYS B . n B 1 46 ALA 46 41 41 ALA ALA B . n B 1 47 PRO 47 42 42 PRO PRO B . n B 1 48 ARG 48 43 43 ARG ARG B . n B 1 49 ASN 49 44 44 ASN ASN B . n B 1 50 LEU 50 45 45 LEU LEU B . n B 1 51 ILE 51 46 46 ILE ILE B . n B 1 52 GLU 52 47 47 GLU GLU B . n B 1 53 GLN 53 48 48 GLN GLN B . n B 1 54 HIS 54 49 49 HIS HIS B . n B 1 55 TYR 55 50 50 TYR TYR B . n B 1 56 LYS 56 51 51 LYS LYS B . n B 1 57 GLU 57 52 52 GLU GLU B . n B 1 58 HIS 58 53 53 HIS HIS B . n B 1 59 SER 59 54 54 SER SER B . n B 1 60 GLU 60 55 55 GLU GLU B . n B 1 61 GLN 61 56 56 GLN GLN B . n B 1 62 SER 62 57 57 SER SER B . n B 1 63 TYR 63 58 58 TYR TYR B . n B 1 64 PHE 64 59 59 PHE PHE B . n B 1 65 ASN 65 60 60 ASN ASN B . n B 1 66 ASP 66 61 61 ASP ASP B . n B 1 67 ASN 67 62 62 ASN ASN B . n B 1 68 CYS 68 63 63 CYS CYS B . n B 1 69 ASP 69 64 64 ASP ASP B . n B 1 70 PHE 70 65 65 PHE PHE B . n B 1 71 MET 71 66 66 MET MET B . n B 1 72 VAL 72 67 67 VAL VAL B . n B 1 73 SER 73 68 68 SER SER B . n B 1 74 GLY 74 69 69 GLY GLY B . n B 1 75 PRO 75 70 70 PRO PRO B . n B 1 76 ILE 76 71 71 ILE ILE B . n B 1 77 ILE 77 72 72 ILE ILE B . n B 1 78 SER 78 73 73 SER SER B . n B 1 79 ILE 79 74 74 ILE ILE B . n B 1 80 VAL 80 75 75 VAL VAL B . n B 1 81 TYR 81 76 76 TYR TYR B . n B 1 82 GLU 82 77 77 GLU GLU B . n B 1 83 GLY 83 78 78 GLY GLY B . n B 1 84 THR 84 79 79 THR THR B . n B 1 85 ASP 85 80 80 ASP ASP B . n B 1 86 ALA 86 81 81 ALA ALA B . n B 1 87 ILE 87 82 82 ILE ILE B . n B 1 88 SER 88 83 83 SER SER B . n B 1 89 LYS 89 84 84 LYS LYS B . n B 1 90 ILE 90 85 85 ILE ILE B . n B 1 91 ARG 91 86 86 ARG ARG B . n B 1 92 ARG 92 87 87 ARG ARG B . n B 1 93 LEU 93 88 88 LEU LEU B . n B 1 94 GLN 94 89 89 GLN GLN B . n B 1 95 GLY 95 90 90 GLY GLY B . n B 1 96 ASN 96 91 91 ASN ASN B . n B 1 97 THR 97 92 92 THR THR B . n B 1 98 ASN 98 93 93 ASN ASN B . n B 1 99 PRO 99 94 94 PRO PRO B . n B 1 100 LEU 100 95 95 LEU LEU B . n B 1 101 ALA 101 96 96 ALA ALA B . n B 1 102 SER 102 97 97 SER SER B . n B 1 103 ALA 103 98 98 ALA ALA B . n B 1 104 PRO 104 99 99 PRO PRO B . n B 1 105 GLY 105 100 100 GLY GLY B . n B 1 106 THR 106 101 101 THR THR B . n B 1 107 ILE 107 102 102 ILE ILE B . n B 1 108 ARG 108 103 103 ARG ARG B . n B 1 109 GLY 109 104 104 GLY GLY B . n B 1 110 ASP 110 105 105 ASP ASP B . n B 1 111 LEU 111 106 106 LEU LEU B . n B 1 112 ALA 112 107 107 ALA ALA B . n B 1 113 ASN 113 108 108 ASN ASN B . n B 1 114 ASP 114 109 109 ASP ASP B . n B 1 115 ILE 115 110 110 ILE ILE B . n B 1 116 GLY 116 111 111 GLY GLY B . n B 1 117 GLU 117 112 112 GLU GLU B . n B 1 118 ASN 118 113 113 ASN ASN B . n B 1 119 LEU 119 114 114 LEU LEU B . n B 1 120 ILE 120 115 115 ILE ILE B . n B 1 121 HIS 121 116 116 HIS HIS B . n B 1 122 ALA 122 117 117 ALA ALA B . n B 1 123 SER 123 118 118 SER SER B . n B 1 124 ASP 124 119 119 ASP ASP B . n B 1 125 SER 125 120 120 SER SER B . n B 1 126 GLU 126 121 121 GLU GLU B . n B 1 127 ASP 127 122 122 ASP ASP B . n B 1 128 SER 128 123 123 SER SER B . n B 1 129 ALA 129 124 124 ALA ALA B . n B 1 130 VAL 130 125 125 VAL VAL B . n B 1 131 ASP 131 126 126 ASP ASP B . n B 1 132 GLU 132 127 127 GLU GLU B . n B 1 133 ILE 133 128 128 ILE ILE B . n B 1 134 SER 134 129 129 SER SER B . n B 1 135 ILE 135 130 130 ILE ILE B . n B 1 136 TRP 136 131 131 TRP TRP B . n B 1 137 PHE 137 132 132 PHE PHE B . n B 1 138 PRO 138 133 133 PRO PRO B . n B 1 139 GLU 139 134 ? ? ? B . n B 1 140 THR 140 135 ? ? ? B . n B 1 141 LYS 141 136 ? ? ? B . n B 1 142 MET 142 137 ? ? ? B . n B 1 143 GLU 143 138 ? ? ? B . n B 1 144 THR 144 139 ? ? ? B . n B 1 145 ASP 145 140 ? ? ? B . n B 1 146 ASN 146 141 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 202 202 MG MG A . D 3 DGI 1 201 201 DGI DGI A . E 2 MG 1 202 202 MG MG B . F 3 DGI 1 201 201 DGI DGI B . G 4 HOH 1 203 1 HOH HOH A . G 4 HOH 2 204 4 HOH HOH A . G 4 HOH 3 205 6 HOH HOH A . G 4 HOH 4 206 8 HOH HOH A . G 4 HOH 5 207 9 HOH HOH A . G 4 HOH 6 208 10 HOH HOH A . G 4 HOH 7 209 11 HOH HOH A . G 4 HOH 8 210 12 HOH HOH A . G 4 HOH 9 211 13 HOH HOH A . G 4 HOH 10 212 16 HOH HOH A . G 4 HOH 11 213 17 HOH HOH A . G 4 HOH 12 214 21 HOH HOH A . G 4 HOH 13 215 22 HOH HOH A . G 4 HOH 14 216 23 HOH HOH A . G 4 HOH 15 217 24 HOH HOH A . G 4 HOH 16 218 25 HOH HOH A . G 4 HOH 17 219 28 HOH HOH A . G 4 HOH 18 220 31 HOH HOH A . G 4 HOH 19 221 32 HOH HOH A . G 4 HOH 20 222 34 HOH HOH A . G 4 HOH 21 223 35 HOH HOH A . G 4 HOH 22 224 36 HOH HOH A . G 4 HOH 23 225 40 HOH HOH A . G 4 HOH 24 226 45 HOH HOH A . G 4 HOH 25 227 46 HOH HOH A . G 4 HOH 26 228 49 HOH HOH A . G 4 HOH 27 229 50 HOH HOH A . G 4 HOH 28 230 51 HOH HOH A . G 4 HOH 29 231 54 HOH HOH A . G 4 HOH 30 232 57 HOH HOH A . G 4 HOH 31 233 59 HOH HOH A . G 4 HOH 32 234 61 HOH HOH A . G 4 HOH 33 235 65 HOH HOH A . G 4 HOH 34 236 67 HOH HOH A . G 4 HOH 35 237 70 HOH HOH A . G 4 HOH 36 238 73 HOH HOH A . G 4 HOH 37 239 75 HOH HOH A . G 4 HOH 38 240 80 HOH HOH A . G 4 HOH 39 241 81 HOH HOH A . G 4 HOH 40 242 83 HOH HOH A . G 4 HOH 41 243 86 HOH HOH A . G 4 HOH 42 244 89 HOH HOH A . G 4 HOH 43 245 90 HOH HOH A . G 4 HOH 44 246 102 HOH HOH A . G 4 HOH 45 247 103 HOH HOH A . G 4 HOH 46 248 105 HOH HOH A . G 4 HOH 47 249 112 HOH HOH A . G 4 HOH 48 250 115 HOH HOH A . G 4 HOH 49 251 116 HOH HOH A . G 4 HOH 50 252 122 HOH HOH A . G 4 HOH 51 253 123 HOH HOH A . G 4 HOH 52 254 124 HOH HOH A . G 4 HOH 53 255 129 HOH HOH A . G 4 HOH 54 256 134 HOH HOH A . G 4 HOH 55 257 139 HOH HOH A . G 4 HOH 56 258 141 HOH HOH A . G 4 HOH 57 259 145 HOH HOH A . G 4 HOH 58 260 148 HOH HOH A . G 4 HOH 59 261 149 HOH HOH A . G 4 HOH 60 262 150 HOH HOH A . G 4 HOH 61 263 151 HOH HOH A . G 4 HOH 62 264 163 HOH HOH A . G 4 HOH 63 265 173 HOH HOH A . G 4 HOH 64 266 181 HOH HOH A . G 4 HOH 65 267 183 HOH HOH A . G 4 HOH 66 268 186 HOH HOH A . G 4 HOH 67 269 202 HOH HOH A . G 4 HOH 68 270 214 HOH HOH A . G 4 HOH 69 271 227 HOH HOH A . G 4 HOH 70 272 241 HOH HOH A . G 4 HOH 71 273 265 HOH HOH A . G 4 HOH 72 274 272 HOH HOH A . G 4 HOH 73 275 292 HOH HOH A . G 4 HOH 74 276 308 HOH HOH A . G 4 HOH 75 277 309 HOH HOH A . G 4 HOH 76 278 315 HOH HOH A . G 4 HOH 77 279 318 HOH HOH A . G 4 HOH 78 280 320 HOH HOH A . G 4 HOH 79 281 323 HOH HOH A . G 4 HOH 80 282 332 HOH HOH A . G 4 HOH 81 283 334 HOH HOH A . G 4 HOH 82 284 337 HOH HOH A . G 4 HOH 83 285 339 HOH HOH A . G 4 HOH 84 286 342 HOH HOH A . G 4 HOH 85 287 347 HOH HOH A . G 4 HOH 86 288 351 HOH HOH A . G 4 HOH 87 289 355 HOH HOH A . G 4 HOH 88 290 359 HOH HOH A . H 4 HOH 1 203 2 HOH HOH B . H 4 HOH 2 204 3 HOH HOH B . H 4 HOH 3 205 5 HOH HOH B . H 4 HOH 4 206 7 HOH HOH B . H 4 HOH 5 207 14 HOH HOH B . H 4 HOH 6 208 15 HOH HOH B . H 4 HOH 7 209 18 HOH HOH B . H 4 HOH 8 210 19 HOH HOH B . H 4 HOH 9 211 20 HOH HOH B . H 4 HOH 10 212 26 HOH HOH B . H 4 HOH 11 213 27 HOH HOH B . H 4 HOH 12 214 29 HOH HOH B . H 4 HOH 13 215 30 HOH HOH B . H 4 HOH 14 216 33 HOH HOH B . H 4 HOH 15 217 38 HOH HOH B . H 4 HOH 16 218 41 HOH HOH B . H 4 HOH 17 219 43 HOH HOH B . H 4 HOH 18 220 47 HOH HOH B . H 4 HOH 19 221 52 HOH HOH B . H 4 HOH 20 222 56 HOH HOH B . H 4 HOH 21 223 58 HOH HOH B . H 4 HOH 22 224 60 HOH HOH B . H 4 HOH 23 225 63 HOH HOH B . H 4 HOH 24 226 64 HOH HOH B . H 4 HOH 25 227 68 HOH HOH B . H 4 HOH 26 228 69 HOH HOH B . H 4 HOH 27 229 71 HOH HOH B . H 4 HOH 28 230 77 HOH HOH B . H 4 HOH 29 231 78 HOH HOH B . H 4 HOH 30 232 79 HOH HOH B . H 4 HOH 31 233 82 HOH HOH B . H 4 HOH 32 234 84 HOH HOH B . H 4 HOH 33 235 87 HOH HOH B . H 4 HOH 34 236 88 HOH HOH B . H 4 HOH 35 237 92 HOH HOH B . H 4 HOH 36 238 93 HOH HOH B . H 4 HOH 37 239 96 HOH HOH B . H 4 HOH 38 240 98 HOH HOH B . H 4 HOH 39 241 99 HOH HOH B . H 4 HOH 40 242 104 HOH HOH B . H 4 HOH 41 243 106 HOH HOH B . H 4 HOH 42 244 109 HOH HOH B . H 4 HOH 43 245 111 HOH HOH B . H 4 HOH 44 246 114 HOH HOH B . H 4 HOH 45 247 118 HOH HOH B . H 4 HOH 46 248 120 HOH HOH B . H 4 HOH 47 249 125 HOH HOH B . H 4 HOH 48 250 133 HOH HOH B . H 4 HOH 49 251 137 HOH HOH B . H 4 HOH 50 252 140 HOH HOH B . H 4 HOH 51 253 146 HOH HOH B . H 4 HOH 52 254 153 HOH HOH B . H 4 HOH 53 255 154 HOH HOH B . H 4 HOH 54 256 155 HOH HOH B . H 4 HOH 55 257 160 HOH HOH B . H 4 HOH 56 258 176 HOH HOH B . H 4 HOH 57 259 177 HOH HOH B . H 4 HOH 58 260 187 HOH HOH B . H 4 HOH 59 261 188 HOH HOH B . H 4 HOH 60 262 191 HOH HOH B . H 4 HOH 61 263 194 HOH HOH B . H 4 HOH 62 264 198 HOH HOH B . H 4 HOH 63 265 212 HOH HOH B . H 4 HOH 64 266 213 HOH HOH B . H 4 HOH 65 267 215 HOH HOH B . H 4 HOH 66 268 223 HOH HOH B . H 4 HOH 67 269 232 HOH HOH B . H 4 HOH 68 270 234 HOH HOH B . H 4 HOH 69 271 244 HOH HOH B . H 4 HOH 70 272 257 HOH HOH B . H 4 HOH 71 273 261 HOH HOH B . H 4 HOH 72 274 264 HOH HOH B . H 4 HOH 73 275 273 HOH HOH B . H 4 HOH 74 276 283 HOH HOH B . H 4 HOH 75 277 290 HOH HOH B . H 4 HOH 76 278 302 HOH HOH B . H 4 HOH 77 279 303 HOH HOH B . H 4 HOH 78 280 310 HOH HOH B . H 4 HOH 79 281 311 HOH HOH B . H 4 HOH 80 282 313 HOH HOH B . H 4 HOH 81 283 317 HOH HOH B . H 4 HOH 82 284 319 HOH HOH B . H 4 HOH 83 285 321 HOH HOH B . H 4 HOH 84 286 322 HOH HOH B . H 4 HOH 85 287 324 HOH HOH B . H 4 HOH 86 288 325 HOH HOH B . H 4 HOH 87 289 326 HOH HOH B . H 4 HOH 88 290 327 HOH HOH B . H 4 HOH 89 291 328 HOH HOH B . H 4 HOH 90 292 331 HOH HOH B . H 4 HOH 91 293 336 HOH HOH B . H 4 HOH 92 294 350 HOH HOH B . H 4 HOH 93 295 357 HOH HOH B . H 4 HOH 94 296 361 HOH HOH B . H 4 HOH 95 297 362 HOH HOH B . H 4 HOH 96 298 363 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 70.2120000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 35.1060000000 -0.8660254038 -0.5000000000 0.0000000000 60.8053756505 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2B ? D DGI . ? A DGI 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2A ? D DGI . ? A DGI 201 ? 1_555 89.3 ? 2 O2B ? D DGI . ? A DGI 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? G HOH . ? A HOH 233 ? 1_555 89.9 ? 3 O2A ? D DGI . ? A DGI 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? G HOH . ? A HOH 233 ? 1_555 174.4 ? 4 O1A ? F DGI . ? B DGI 201 ? 1_555 MG ? E MG . ? B MG 202 ? 1_555 O2B ? F DGI . ? B DGI 201 ? 1_555 90.9 ? 5 O1A ? F DGI . ? B DGI 201 ? 1_555 MG ? E MG . ? B MG 202 ? 1_555 O ? H HOH . ? B HOH 224 ? 1_555 174.5 ? 6 O2B ? F DGI . ? B DGI 201 ? 1_555 MG ? E MG . ? B MG 202 ? 1_555 O ? H HOH . ? B HOH 224 ? 1_555 89.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 3 'Structure model' '_struct_ref_seq_dif.details' 17 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 AMoRE phasing . ? 2 PHENIX refinement . ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3EMT _pdbx_entry_details.sequence_details 'RESIDUES 92-94 ILT WERE REPLACED BY RESIDUES 92-98 TNPLASA.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 114 ? ? 71.48 -37.45 2 1 ASN B 29 ? ? 80.69 23.98 3 1 LEU B 114 ? ? 74.22 -38.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR -4 ? A TYR 1 2 1 Y 1 A LYS -3 ? A LYS 2 3 1 Y 1 A LYS -2 ? A LYS 3 4 1 Y 1 A ALA -1 ? A ALA 4 5 1 Y 1 A GLY 0 ? A GLY 5 6 1 Y 1 A LEU 1 ? A LEU 6 7 1 Y 1 A THR 135 ? A THR 140 8 1 Y 1 A LYS 136 ? A LYS 141 9 1 Y 1 A MET 137 ? A MET 142 10 1 Y 1 A GLU 138 ? A GLU 143 11 1 Y 1 A THR 139 ? A THR 144 12 1 Y 1 A ASP 140 ? A ASP 145 13 1 Y 1 A ASN 141 ? A ASN 146 14 1 Y 1 B TYR -4 ? B TYR 1 15 1 Y 1 B LYS -3 ? B LYS 2 16 1 Y 1 B LYS -2 ? B LYS 3 17 1 Y 1 B ALA -1 ? B ALA 4 18 1 Y 1 B GLY 0 ? B GLY 5 19 1 Y 1 B GLU 134 ? B GLU 139 20 1 Y 1 B THR 135 ? B THR 140 21 1 Y 1 B LYS 136 ? B LYS 141 22 1 Y 1 B MET 137 ? B MET 142 23 1 Y 1 B GLU 138 ? B GLU 143 24 1 Y 1 B THR 139 ? B THR 144 25 1 Y 1 B ASP 140 ? B ASP 145 26 1 Y 1 B ASN 141 ? B ASN 146 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DGI O1B O N N 88 DGI PB P N N 89 DGI O2B O N N 90 DGI O3B O N N 91 DGI O3A O N N 92 DGI PA P N S 93 DGI O1A O N N 94 DGI O2A O N N 95 DGI "O5'" O N N 96 DGI "C5'" C N N 97 DGI "C4'" C N R 98 DGI "O4'" O N N 99 DGI "C3'" C N S 100 DGI "O3'" O N N 101 DGI "C2'" C N N 102 DGI "C1'" C N R 103 DGI N9 N Y N 104 DGI C8 C Y N 105 DGI N7 N Y N 106 DGI C5 C Y N 107 DGI C4 C Y N 108 DGI N3 N N N 109 DGI C2 C N N 110 DGI N2 N N N 111 DGI N1 N N N 112 DGI C6 C N N 113 DGI O6 O N N 114 DGI HOB2 H N N 115 DGI HOB3 H N N 116 DGI HOA2 H N N 117 DGI "H5'" H N N 118 DGI "H5''" H N N 119 DGI "H4'" H N N 120 DGI "H3'" H N N 121 DGI "HO3'" H N N 122 DGI "H2'" H N N 123 DGI "H2''" H N N 124 DGI "H1'" H N N 125 DGI H8 H N N 126 DGI HN21 H N N 127 DGI HN22 H N N 128 DGI HN1 H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIS N N N N 179 HIS CA C N S 180 HIS C C N N 181 HIS O O N N 182 HIS CB C N N 183 HIS CG C Y N 184 HIS ND1 N Y N 185 HIS CD2 C Y N 186 HIS CE1 C Y N 187 HIS NE2 N Y N 188 HIS OXT O N N 189 HIS H H N N 190 HIS H2 H N N 191 HIS HA H N N 192 HIS HB2 H N N 193 HIS HB3 H N N 194 HIS HD1 H N N 195 HIS HD2 H N N 196 HIS HE1 H N N 197 HIS HE2 H N N 198 HIS HXT H N N 199 HOH O O N N 200 HOH H1 H N N 201 HOH H2 H N N 202 ILE N N N N 203 ILE CA C N S 204 ILE C C N N 205 ILE O O N N 206 ILE CB C N S 207 ILE CG1 C N N 208 ILE CG2 C N N 209 ILE CD1 C N N 210 ILE OXT O N N 211 ILE H H N N 212 ILE H2 H N N 213 ILE HA H N N 214 ILE HB H N N 215 ILE HG12 H N N 216 ILE HG13 H N N 217 ILE HG21 H N N 218 ILE HG22 H N N 219 ILE HG23 H N N 220 ILE HD11 H N N 221 ILE HD12 H N N 222 ILE HD13 H N N 223 ILE HXT H N N 224 LEU N N N N 225 LEU CA C N S 226 LEU C C N N 227 LEU O O N N 228 LEU CB C N N 229 LEU CG C N N 230 LEU CD1 C N N 231 LEU CD2 C N N 232 LEU OXT O N N 233 LEU H H N N 234 LEU H2 H N N 235 LEU HA H N N 236 LEU HB2 H N N 237 LEU HB3 H N N 238 LEU HG H N N 239 LEU HD11 H N N 240 LEU HD12 H N N 241 LEU HD13 H N N 242 LEU HD21 H N N 243 LEU HD22 H N N 244 LEU HD23 H N N 245 LEU HXT H N N 246 LYS N N N N 247 LYS CA C N S 248 LYS C C N N 249 LYS O O N N 250 LYS CB C N N 251 LYS CG C N N 252 LYS CD C N N 253 LYS CE C N N 254 LYS NZ N N N 255 LYS OXT O N N 256 LYS H H N N 257 LYS H2 H N N 258 LYS HA H N N 259 LYS HB2 H N N 260 LYS HB3 H N N 261 LYS HG2 H N N 262 LYS HG3 H N N 263 LYS HD2 H N N 264 LYS HD3 H N N 265 LYS HE2 H N N 266 LYS HE3 H N N 267 LYS HZ1 H N N 268 LYS HZ2 H N N 269 LYS HZ3 H N N 270 LYS HXT H N N 271 MET N N N N 272 MET CA C N S 273 MET C C N N 274 MET O O N N 275 MET CB C N N 276 MET CG C N N 277 MET SD S N N 278 MET CE C N N 279 MET OXT O N N 280 MET H H N N 281 MET H2 H N N 282 MET HA H N N 283 MET HB2 H N N 284 MET HB3 H N N 285 MET HG2 H N N 286 MET HG3 H N N 287 MET HE1 H N N 288 MET HE2 H N N 289 MET HE3 H N N 290 MET HXT H N N 291 MG MG MG N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DGI O1B PB doub N N 83 DGI PB O2B sing N N 84 DGI PB O3B sing N N 85 DGI PB O3A sing N N 86 DGI O2B HOB2 sing N N 87 DGI O3B HOB3 sing N N 88 DGI O3A PA sing N N 89 DGI PA O1A doub N N 90 DGI PA O2A sing N N 91 DGI PA "O5'" sing N N 92 DGI O2A HOA2 sing N N 93 DGI "O5'" "C5'" sing N N 94 DGI "C5'" "C4'" sing N N 95 DGI "C5'" "H5'" sing N N 96 DGI "C5'" "H5''" sing N N 97 DGI "C4'" "O4'" sing N N 98 DGI "C4'" "C3'" sing N N 99 DGI "C4'" "H4'" sing N N 100 DGI "O4'" "C1'" sing N N 101 DGI "C3'" "O3'" sing N N 102 DGI "C3'" "C2'" sing N N 103 DGI "C3'" "H3'" sing N N 104 DGI "O3'" "HO3'" sing N N 105 DGI "C2'" "C1'" sing N N 106 DGI "C2'" "H2'" sing N N 107 DGI "C2'" "H2''" sing N N 108 DGI "C1'" N9 sing N N 109 DGI "C1'" "H1'" sing N N 110 DGI N9 C8 sing Y N 111 DGI N9 C4 sing Y N 112 DGI C8 N7 doub Y N 113 DGI C8 H8 sing N N 114 DGI N7 C5 sing Y N 115 DGI C5 C4 doub Y N 116 DGI C5 C6 sing N N 117 DGI C4 N3 sing N N 118 DGI N3 C2 doub N N 119 DGI C2 N2 sing N N 120 DGI C2 N1 sing N N 121 DGI N2 HN21 sing N N 122 DGI N2 HN22 sing N N 123 DGI N1 C6 sing N N 124 DGI N1 HN1 sing N N 125 DGI C6 O6 doub N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "2'-DEOXYGUANOSINE-5'-DIPHOSPHATE" DGI 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2B8P _pdbx_initial_refinement_model.details ? #