data_3EUM # _entry.id 3EUM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EUM pdb_00003eum 10.2210/pdb3eum/pdb NDB DD0101 ? ? RCSB RCSB049786 ? ? WWPDB D_1000049786 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1L1H 'Same quadruplex structure bound with a different ligand BSU-6039' unspecified PDB 1JPQ 'Same quadruplex structure in its native form (ligand-free)' unspecified PDB 1JRN 'Same quadruplex structure in its native form (ligand-free)' unspecified PDB 3CE5 'A bimolecular parallel-stranded human telomeric quadruplex in complex with a 3,6,9-trisubstituted acridine molecular BRACO19' unspecified PDB 3EM2 'A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6038' unspecified PDB 3EQW ;A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6042 in small unit cell ; unspecified PDB 3ERU 'A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6045' unspecified PDB 3ES0 'A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6048' unspecified PDB 3ET8 'A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6054' unspecified PDB 3EUI ;A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6042 in large unit cell ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3EUM _pdbx_database_status.recvd_initial_deposition_date 2008-10-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Campbell, N.H.' 1 'Parkinson, G.' 2 'Neidle, S.' 3 # _citation.id primary _citation.title 'Selectivity in Ligand Recognition of G-Quadruplex Loops.' _citation.journal_abbrev Biochemistry _citation.journal_volume 48 _citation.page_first 1675 _citation.page_last 1680 _citation.year 2009 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19173611 _citation.pdbx_database_id_DOI 10.1021/bi802233v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Campbell, N.H.' 1 ? primary 'Patel, M.' 2 ? primary 'Tofa, A.B.' 3 ? primary 'Ghosh, R.' 4 ? primary 'Parkinson, G.N.' 5 ? primary 'Neidle, S.' 6 ? # _cell.entry_id 3EUM _cell.length_a 55.620 _cell.length_b 42.307 _cell.length_c 27.079 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EUM _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*DGP*DGP*DGP*DGP*DTP*DTP*DTP*DTP*DGP*DGP*DGP*DG)-3'" 3805.460 2 ? ? ? 'Bimolecular anti-parallel-stranded DNA quadruplex' 2 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? 3 non-polymer syn '3,6-Bis[3-(azepan-1-yl)propionamido]acridine' 515.690 1 ? ? ? ? 4 water nat water 18.015 52 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DG)(DG)(DT)(DT)(DT)(DT)(DG)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GGGGTTTTGGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The sequence occurs naturally in Oxytricha nova' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3EUM _struct_ref.pdbx_db_accession 3EUM _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code GGGGTTTTGGGG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EUM A 1 ? 12 ? 3EUM 1 ? 12 ? 1 12 2 1 3EUM B 1 ? 12 ? 3EUM 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NCQ non-polymer . '3,6-Bis[3-(azepan-1-yl)propionamido]acridine' "N,N'-acridine-3,6-diylbis(3-azepan-1-ylpropanamide)" 'C31 H41 N5 O2' 515.690 # _exptl.entry_id 3EUM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 41.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 285.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;2 microliter drops containing 5% v/v MPD, 0.50 mM DNA, 0.25 mM Ligand, 40 mM Potassium chloride, 5 mM Magnesium chloride, 4.1 Spermine equilibrated against 35% v/v MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 285.15K ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 'Potassium chloride' ? ? ? 1 3 1 'Magnesium chloride' ? ? ? 1 4 1 Spermine ? ? ? 1 5 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'OXFORD ONYX CCD' _diffrn_detector.pdbx_collection_date 2007-08-09 _diffrn_detector.details 'Oxford diffraction Nova' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.540562 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type 'OXFORD DIFFRACTION ENHANCE ULTRA' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.540562 # _reflns.entry_id 3EUM _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 24.35 _reflns.d_resolution_high 1.78 _reflns.number_obs 5372 _reflns.number_all 6576 _reflns.percent_possible_obs 81.7 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.57 _reflns.B_iso_Wilson_estimate 14.2 _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.78 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 39.1 _reflns_shell.Rmerge_I_obs 0.280 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 539 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3EUM _refine.ls_number_reflns_obs 5106 _refine.ls_number_reflns_all 5372 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.35 _refine.ls_d_res_high 1.78 _refine.ls_percent_reflns_obs 81.91 _refine.ls_R_factor_obs 0.22410 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22174 _refine.ls_R_factor_R_free 0.27042 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 238 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 16.544 _refine.aniso_B[1][1] -0.87 _refine.aniso_B[2][2] -0.93 _refine.aniso_B[3][3] 1.80 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ID 1L1H' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.202 _refine.pdbx_overall_ESU_R_Free 0.179 _refine.overall_SU_ML 0.107 _refine.overall_SU_B 3.508 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 506 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 600 _refine_hist.d_res_high 1.78 _refine_hist.d_res_low 24.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 610 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.894 3.000 ? 936 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.066 0.200 ? 94 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 298 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.340 0.200 ? 211 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.294 0.200 ? 346 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.123 0.200 ? 31 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.082 0.200 ? 10 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.153 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.272 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.438 3.000 ? 683 'X-RAY DIFFRACTION' ? r_scangle_it 2.055 4.500 ? 936 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.78 _refine_ls_shell.d_res_low 1.83 _refine_ls_shell.number_reflns_R_work 107 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 24.79 _refine_ls_shell.R_factor_R_free 0.258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 9 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3EUM _struct.title 'A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6066' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EUM _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'quadruplex, Oxtyricha nova, BSU-6066, BSU6066, anti-parallel, bimolecular, macromolecule, DNA, G-quadruplex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 C K . K ? ? A DG 1 A K 26 1_555 ? ? ? ? ? ? ? 2.723 ? ? metalc2 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 26 1_555 ? ? ? ? ? ? ? 2.864 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 27 1_555 ? ? ? ? ? ? ? 2.866 ? ? metalc4 metalc ? ? A DG 3 O6 ? ? ? 1_555 D K . K ? ? A DG 3 A K 27 1_555 ? ? ? ? ? ? ? 2.822 ? ? metalc5 metalc ? ? A DG 4 O6 ? ? ? 1_555 E K . K ? ? A DG 4 A K 28 1_555 ? ? ? ? ? ? ? 2.793 ? ? metalc6 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 28 1_555 ? ? ? ? ? ? ? 2.690 ? ? metalc7 metalc ? ? A DG 10 O6 ? ? ? 1_555 D K . K ? ? A DG 10 A K 27 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc8 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 28 1_555 ? ? ? ? ? ? ? 2.974 ? ? metalc9 metalc ? ? A DG 11 O6 ? ? ? 1_555 C K . K ? ? A DG 11 A K 26 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc10 metalc ? ? A DG 11 O6 ? ? ? 1_555 D K . K ? ? A DG 11 A K 27 1_555 ? ? ? ? ? ? ? 2.919 ? ? metalc11 metalc ? ? A DG 12 O6 ? ? ? 1_555 C K . K ? ? A DG 12 A K 26 1_555 ? ? ? ? ? ? ? 2.899 ? ? metalc12 metalc ? ? A DG 12 O6 ? ? ? 1_555 G K . K ? ? A DG 12 B K 25 1_555 ? ? ? ? ? ? ? 2.915 ? ? metalc13 metalc ? ? C K . K ? ? ? 1_555 B DG 3 O6 ? ? A K 26 B DG 15 1_555 ? ? ? ? ? ? ? 2.867 ? ? metalc14 metalc ? ? C K . K ? ? ? 1_555 B DG 4 O6 ? ? A K 26 B DG 16 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc15 metalc ? ? C K . K ? ? ? 1_555 B DG 9 O6 ? ? A K 26 B DG 21 1_555 ? ? ? ? ? ? ? 2.962 ? ? metalc16 metalc ? ? C K . K ? ? ? 1_555 B DG 10 O6 ? ? A K 26 B DG 22 1_555 ? ? ? ? ? ? ? 2.905 ? ? metalc17 metalc ? ? D K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 27 B DG 14 1_555 ? ? ? ? ? ? ? 2.704 ? ? metalc18 metalc ? ? D K . K ? ? ? 1_555 B DG 3 O6 ? ? A K 27 B DG 15 1_555 ? ? ? ? ? ? ? 2.855 ? ? metalc19 metalc ? ? D K . K ? ? ? 1_555 B DG 10 O6 ? ? A K 27 B DG 22 1_555 ? ? ? ? ? ? ? 2.802 ? ? metalc20 metalc ? ? D K . K ? ? ? 1_555 B DG 11 O6 ? ? A K 27 B DG 23 1_555 ? ? ? ? ? ? ? 2.825 ? ? metalc21 metalc ? ? E K . K ? ? ? 1_555 B DG 1 O6 ? ? A K 28 B DG 13 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc22 metalc ? ? E K . K ? ? ? 1_555 B DG 2 O6 ? ? A K 28 B DG 14 1_555 ? ? ? ? ? ? ? 2.896 ? ? metalc23 metalc ? ? E K . K ? ? ? 1_555 B DG 11 O6 ? ? A K 28 B DG 23 1_555 ? ? ? ? ? ? ? 2.989 ? ? metalc24 metalc ? ? E K . K ? ? ? 1_555 B DG 12 O6 ? ? A K 28 B DG 24 1_555 ? ? ? ? ? ? ? 2.767 ? ? metalc25 metalc ? ? B DG 4 O6 ? ? ? 1_555 G K . K ? ? B DG 16 B K 25 1_555 ? ? ? ? ? ? ? 2.891 ? ? metalc26 metalc ? ? B DT 5 O2 ? ? ? 1_555 G K . K ? ? B DT 17 B K 25 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc27 metalc ? ? B DT 7 O2 ? ? ? 1_555 G K . K ? ? B DT 19 B K 25 1_555 ? ? ? ? ? ? ? 2.641 ? ? metalc28 metalc ? ? B DG 9 O6 ? ? ? 1_555 G K . K ? ? B DG 21 B K 25 1_555 ? ? ? ? ? ? ? 2.945 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 B DG 4 N2 ? ? A DG 1 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DG 4 N1 ? ? A DG 1 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DG 9 O6 ? ? A DG 1 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DG 9 N7 ? ? A DG 1 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DG 3 O6 ? ? A DG 2 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DG 3 N7 ? ? A DG 2 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 B DG 10 N2 ? ? A DG 2 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DG 10 N1 ? ? A DG 2 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N7 ? ? ? 1_555 B DG 2 N2 ? ? A DG 3 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DG 2 N1 ? ? A DG 3 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DG 11 O6 ? ? A DG 3 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DG 11 N7 ? ? A DG 3 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DG 1 O6 ? ? A DG 4 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DG 1 N7 ? ? A DG 4 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 4 N7 ? ? ? 1_555 B DG 12 N2 ? ? A DG 4 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DG 12 N1 ? ? A DG 4 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N7 ? ? ? 1_555 B DG 1 N2 ? ? A DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DG 1 N1 ? ? A DG 9 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DG 12 O6 ? ? A DG 9 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DG 12 N7 ? ? A DG 9 B DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DG 2 O6 ? ? A DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DG 2 N7 ? ? A DG 10 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 10 N7 ? ? ? 1_555 B DG 11 N2 ? ? A DG 10 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DG 11 N1 ? ? A DG 10 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 11 N7 ? ? ? 1_555 B DG 3 N2 ? ? A DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DG 3 N1 ? ? A DG 11 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DG 10 O6 ? ? A DG 11 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DG 10 N7 ? ? A DG 11 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DG 4 O6 ? ? A DG 12 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DG 4 N7 ? ? A DG 12 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? A DG 12 N7 ? ? ? 1_555 B DG 9 N2 ? ? A DG 12 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DG 9 N1 ? ? A DG 12 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DT 5 O2 ? ? ? 1_555 B DT 7 N3 ? ? B DT 17 B DT 19 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 26 ? 10 'BINDING SITE FOR RESIDUE K A 26' AC2 Software A K 27 ? 10 'BINDING SITE FOR RESIDUE K A 27' AC3 Software A K 28 ? 9 'BINDING SITE FOR RESIDUE K A 28' AC4 Software A NCQ 29 ? 9 'BINDING SITE FOR RESIDUE NCQ A 29' AC5 Software B K 25 ? 7 'BINDING SITE FOR RESIDUE K B 25' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 DG A 1 ? DG A 1 . ? 1_555 ? 2 AC1 10 DG A 2 ? DG A 2 . ? 1_555 ? 3 AC1 10 DG A 11 ? DG A 11 . ? 1_555 ? 4 AC1 10 DG A 12 ? DG A 12 . ? 1_555 ? 5 AC1 10 K D . ? K A 27 . ? 1_555 ? 6 AC1 10 DG B 3 ? DG B 15 . ? 1_555 ? 7 AC1 10 DG B 4 ? DG B 16 . ? 1_555 ? 8 AC1 10 DG B 9 ? DG B 21 . ? 1_555 ? 9 AC1 10 DG B 10 ? DG B 22 . ? 1_555 ? 10 AC1 10 K G . ? K B 25 . ? 1_555 ? 11 AC2 10 DG A 2 ? DG A 2 . ? 1_555 ? 12 AC2 10 DG A 3 ? DG A 3 . ? 1_555 ? 13 AC2 10 DG A 10 ? DG A 10 . ? 1_555 ? 14 AC2 10 DG A 11 ? DG A 11 . ? 1_555 ? 15 AC2 10 K C . ? K A 26 . ? 1_555 ? 16 AC2 10 K E . ? K A 28 . ? 1_555 ? 17 AC2 10 DG B 2 ? DG B 14 . ? 1_555 ? 18 AC2 10 DG B 3 ? DG B 15 . ? 1_555 ? 19 AC2 10 DG B 10 ? DG B 22 . ? 1_555 ? 20 AC2 10 DG B 11 ? DG B 23 . ? 1_555 ? 21 AC3 9 DG A 3 ? DG A 3 . ? 1_555 ? 22 AC3 9 DG A 4 ? DG A 4 . ? 1_555 ? 23 AC3 9 DG A 9 ? DG A 9 . ? 1_555 ? 24 AC3 9 DG A 10 ? DG A 10 . ? 1_555 ? 25 AC3 9 K D . ? K A 27 . ? 1_555 ? 26 AC3 9 DG B 1 ? DG B 13 . ? 1_555 ? 27 AC3 9 DG B 2 ? DG B 14 . ? 1_555 ? 28 AC3 9 DG B 11 ? DG B 23 . ? 1_555 ? 29 AC3 9 DG B 12 ? DG B 24 . ? 1_555 ? 30 AC4 9 DT A 6 ? DT A 6 . ? 1_555 ? 31 AC4 9 DT A 7 ? DT A 7 . ? 1_555 ? 32 AC4 9 DG A 9 ? DG A 9 . ? 1_555 ? 33 AC4 9 HOH H . ? HOH A 34 . ? 1_555 ? 34 AC4 9 HOH H . ? HOH A 52 . ? 1_555 ? 35 AC4 9 DG B 1 ? DG B 13 . ? 1_555 ? 36 AC4 9 DT B 8 ? DT B 20 . ? 3_556 ? 37 AC4 9 DG B 9 ? DG B 21 . ? 3_556 ? 38 AC4 9 DG B 12 ? DG B 24 . ? 1_555 ? 39 AC5 7 DG A 1 ? DG A 1 . ? 1_555 ? 40 AC5 7 DG A 12 ? DG A 12 . ? 1_555 ? 41 AC5 7 K C . ? K A 26 . ? 1_555 ? 42 AC5 7 DG B 4 ? DG B 16 . ? 1_555 ? 43 AC5 7 DT B 5 ? DT B 17 . ? 1_555 ? 44 AC5 7 DT B 7 ? DT B 19 . ? 1_555 ? 45 AC5 7 DG B 9 ? DG B 21 . ? 1_555 ? # _database_PDB_matrix.entry_id 3EUM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3EUM _atom_sites.fract_transf_matrix[1][1] 0.017979 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023637 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.036929 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DG 11 11 11 DG G A . n A 1 12 DG 12 12 12 DG G A . n B 1 1 DG 1 13 13 DG G B . n B 1 2 DG 2 14 14 DG G B . n B 1 3 DG 3 15 15 DG G B . n B 1 4 DG 4 16 16 DG G B . n B 1 5 DT 5 17 17 DT T B . n B 1 6 DT 6 18 18 DT T B . n B 1 7 DT 7 19 19 DT T B . n B 1 8 DT 8 20 20 DT T B . n B 1 9 DG 9 21 21 DG G B . n B 1 10 DG 10 22 22 DG G B . n B 1 11 DG 11 23 23 DG G B . n B 1 12 DG 12 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 26 26 K K A . D 2 K 1 27 27 K K A . E 2 K 1 28 28 K K A . F 3 NCQ 1 29 29 NCQ NCQ A . G 2 K 1 25 25 K K B . H 4 HOH 1 30 6 HOH HOH A . H 4 HOH 2 31 7 HOH HOH A . H 4 HOH 3 32 10 HOH HOH A . H 4 HOH 4 33 11 HOH HOH A . H 4 HOH 5 34 12 HOH HOH A . H 4 HOH 6 35 14 HOH HOH A . H 4 HOH 7 36 15 HOH HOH A . H 4 HOH 8 37 16 HOH HOH A . H 4 HOH 9 38 23 HOH HOH A . H 4 HOH 10 39 32 HOH HOH A . H 4 HOH 11 40 34 HOH HOH A . H 4 HOH 12 41 35 HOH HOH A . H 4 HOH 13 42 36 HOH HOH A . H 4 HOH 14 43 40 HOH HOH A . H 4 HOH 15 44 44 HOH HOH A . H 4 HOH 16 45 49 HOH HOH A . H 4 HOH 17 46 50 HOH HOH A . H 4 HOH 18 47 51 HOH HOH A . H 4 HOH 19 48 54 HOH HOH A . H 4 HOH 20 49 56 HOH HOH A . H 4 HOH 21 50 57 HOH HOH A . H 4 HOH 22 51 58 HOH HOH A . H 4 HOH 23 52 59 HOH HOH A . H 4 HOH 24 53 39 HOH HOH A . H 4 HOH 25 54 41 HOH HOH A . H 4 HOH 26 55 47 HOH HOH A . I 4 HOH 1 26 1 HOH HOH B . I 4 HOH 2 27 2 HOH HOH B . I 4 HOH 3 28 3 HOH HOH B . I 4 HOH 4 29 4 HOH HOH B . I 4 HOH 5 30 8 HOH HOH B . I 4 HOH 6 31 9 HOH HOH B . I 4 HOH 7 32 13 HOH HOH B . I 4 HOH 8 33 17 HOH HOH B . I 4 HOH 9 34 18 HOH HOH B . I 4 HOH 10 35 21 HOH HOH B . I 4 HOH 11 36 24 HOH HOH B . I 4 HOH 12 37 26 HOH HOH B . I 4 HOH 13 38 27 HOH HOH B . I 4 HOH 14 39 28 HOH HOH B . I 4 HOH 15 40 29 HOH HOH B . I 4 HOH 16 41 31 HOH HOH B . I 4 HOH 17 42 37 HOH HOH B . I 4 HOH 18 43 38 HOH HOH B . I 4 HOH 19 46 42 HOH HOH B . I 4 HOH 20 47 43 HOH HOH B . I 4 HOH 21 48 45 HOH HOH B . I 4 HOH 22 49 46 HOH HOH B . I 4 HOH 23 51 48 HOH HOH B . I 4 HOH 24 52 52 HOH HOH B . I 4 HOH 25 53 53 HOH HOH B . I 4 HOH 26 54 55 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3160 ? 1 MORE -9.4 ? 1 'SSA (A^2)' 3650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 68.5 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 170.4 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 108.9 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 111.5 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 173.5 ? 6 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 72.2 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 102.4 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 70.0 ? 9 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 68.3 ? 10 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 115.9 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 71.7 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 116.0 ? 13 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 102.4 ? 14 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 69.5 ? 15 O6 ? B DG 3 ? B DG 15 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 72.3 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 70.7 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 104.9 ? 18 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 118.7 ? 19 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 69.5 ? 20 O6 ? B DG 3 ? B DG 15 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 172.8 ? 21 O6 ? B DG 4 ? B DG 16 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 106.5 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 115.3 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 68.4 ? 24 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 70.8 ? 25 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 106.5 ? 26 O6 ? B DG 3 ? B DG 15 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 105.4 ? 27 O6 ? B DG 4 ? B DG 16 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 173.0 ? 28 O6 ? B DG 9 ? B DG 21 ? 1_555 K ? C K . ? A K 26 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 76.6 ? 29 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 87.6 ? 30 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 128.3 ? 31 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 113.1 ? 32 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 105.3 ? 33 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 132.2 ? 34 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 94.6 ? 35 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 155.8 ? 36 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 73.8 ? 37 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 74.4 ? 38 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 77.8 ? 39 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 70.2 ? 40 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 75.6 ? 41 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 158.1 ? 42 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 66.7 ? 43 O6 ? B DG 2 ? B DG 14 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 3 ? B DG 15 ? 1_555 90.0 ? 44 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 69.8 ? 45 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 152.9 ? 46 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 73.2 ? 47 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 70.4 ? 48 O6 ? B DG 2 ? B DG 14 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 131.7 ? 49 O6 ? B DG 3 ? B DG 15 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 10 ? B DG 22 ? 1_555 108.6 ? 50 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 75.6 ? 51 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 66.2 ? 52 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 71.6 ? 53 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 161.3 ? 54 O6 ? B DG 2 ? B DG 14 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 109.3 ? 55 O6 ? B DG 3 ? B DG 15 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 129.1 ? 56 O6 ? B DG 10 ? B DG 22 ? 1_555 K ? D K . ? A K 27 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 93.1 ? 57 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 122.8 ? 58 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 164.0 ? 59 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 71.9 ? 60 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 1 ? B DG 13 ? 1_555 73.8 ? 61 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 1 ? B DG 13 ? 1_555 76.3 ? 62 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 1 ? B DG 13 ? 1_555 118.7 ? 63 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 112.5 ? 64 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 100.6 ? 65 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 66.9 ? 66 O6 ? B DG 1 ? B DG 13 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 2 ? B DG 14 ? 1_555 69.5 ? 67 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 100.1 ? 68 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 118.9 ? 69 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 65.1 ? 70 O6 ? B DG 1 ? B DG 13 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 163.6 ? 71 O6 ? B DG 2 ? B DG 14 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 11 ? B DG 23 ? 1_555 100.0 ? 72 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 73.7 ? 73 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 80.6 ? 74 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 105.1 ? 75 O6 ? B DG 1 ? B DG 13 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 119.6 ? 76 O6 ? B DG 2 ? B DG 14 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 170.7 ? 77 O6 ? B DG 11 ? B DG 23 ? 1_555 K ? E K . ? A K 28 ? 1_555 O6 ? B DG 12 ? B DG 24 ? 1_555 71.5 ? 78 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? G K . ? B K 25 ? 1_555 O6 ? B DG 4 ? B DG 16 ? 1_555 67.6 ? 79 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? G K . ? B K 25 ? 1_555 O2 ? B DT 5 ? B DT 17 ? 1_555 129.4 ? 80 O6 ? B DG 4 ? B DG 16 ? 1_555 K ? G K . ? B K 25 ? 1_555 O2 ? B DT 5 ? B DT 17 ? 1_555 75.0 ? 81 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? G K . ? B K 25 ? 1_555 O2 ? B DT 7 ? B DT 19 ? 1_555 153.1 ? 82 O6 ? B DG 4 ? B DG 16 ? 1_555 K ? G K . ? B K 25 ? 1_555 O2 ? B DT 7 ? B DT 19 ? 1_555 128.5 ? 83 O2 ? B DT 5 ? B DT 17 ? 1_555 K ? G K . ? B K 25 ? 1_555 O2 ? B DT 7 ? B DT 19 ? 1_555 77.5 ? 84 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? G K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 69.5 ? 85 O6 ? B DG 4 ? B DG 16 ? 1_555 K ? G K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 103.7 ? 86 O2 ? B DT 5 ? B DT 17 ? 1_555 K ? G K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 155.0 ? 87 O2 ? B DT 7 ? B DT 19 ? 1_555 K ? G K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 21 ? 1_555 84.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2018-04-04 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' diffrn_source 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_diffrn_source.type' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_dist_value' 6 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 20 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 21 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 22 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrysalisPro 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 CrysalisPro 'data reduction' . ? 4 CrysalisPro 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C5 A DG 3 ? ? C6 A DG 3 ? ? N1 A DG 3 ? ? 114.81 111.50 3.31 0.50 N 2 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.21 108.30 1.91 0.30 N 3 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.63 108.30 3.33 0.30 N 4 1 "O5'" A DG 11 ? ? "C5'" A DG 11 ? ? "C4'" A DG 11 ? ? 100.68 109.40 -8.72 0.80 N 5 1 C5 A DG 12 ? ? C6 A DG 12 ? ? O6 A DG 12 ? ? 124.62 128.60 -3.98 0.60 N 6 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 113.74 108.30 5.44 0.30 N 7 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.40 108.30 3.10 0.30 N 8 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.54 108.30 3.24 0.30 N 9 1 "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? "C3'" B DT 17 ? ? 101.07 104.50 -3.43 0.40 N 10 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.10 108.30 3.80 0.30 N 11 1 "C3'" B DG 22 ? ? "O3'" B DG 22 ? ? P B DG 23 ? ? 127.69 119.70 7.99 1.20 Y 12 1 "O4'" B DG 23 ? ? "C1'" B DG 23 ? ? N9 B DG 23 ? ? 111.13 108.30 2.83 0.30 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DG OP3 O N N 1 DG P P N N 2 DG OP1 O N N 3 DG OP2 O N N 4 DG "O5'" O N N 5 DG "C5'" C N N 6 DG "C4'" C N R 7 DG "O4'" O N N 8 DG "C3'" C N S 9 DG "O3'" O N N 10 DG "C2'" C N N 11 DG "C1'" C N R 12 DG N9 N Y N 13 DG C8 C Y N 14 DG N7 N Y N 15 DG C5 C Y N 16 DG C6 C N N 17 DG O6 O N N 18 DG N1 N N N 19 DG C2 C N N 20 DG N2 N N N 21 DG N3 N N N 22 DG C4 C Y N 23 DG HOP3 H N N 24 DG HOP2 H N N 25 DG "H5'" H N N 26 DG "H5''" H N N 27 DG "H4'" H N N 28 DG "H3'" H N N 29 DG "HO3'" H N N 30 DG "H2'" H N N 31 DG "H2''" H N N 32 DG "H1'" H N N 33 DG H8 H N N 34 DG H1 H N N 35 DG H21 H N N 36 DG H22 H N N 37 DT OP3 O N N 38 DT P P N N 39 DT OP1 O N N 40 DT OP2 O N N 41 DT "O5'" O N N 42 DT "C5'" C N N 43 DT "C4'" C N R 44 DT "O4'" O N N 45 DT "C3'" C N S 46 DT "O3'" O N N 47 DT "C2'" C N N 48 DT "C1'" C N R 49 DT N1 N N N 50 DT C2 C N N 51 DT O2 O N N 52 DT N3 N N N 53 DT C4 C N N 54 DT O4 O N N 55 DT C5 C N N 56 DT C7 C N N 57 DT C6 C N N 58 DT HOP3 H N N 59 DT HOP2 H N N 60 DT "H5'" H N N 61 DT "H5''" H N N 62 DT "H4'" H N N 63 DT "H3'" H N N 64 DT "HO3'" H N N 65 DT "H2'" H N N 66 DT "H2''" H N N 67 DT "H1'" H N N 68 DT H3 H N N 69 DT H71 H N N 70 DT H72 H N N 71 DT H73 H N N 72 DT H6 H N N 73 HOH O O N N 74 HOH H1 H N N 75 HOH H2 H N N 76 K K K N N 77 NCQ O39 O N N 78 NCQ C9 C N N 79 NCQ C10 C N N 80 NCQ C13 C N N 81 NCQ N16 N N N 82 NCQ C36 C N N 83 NCQ C33 C N N 84 NCQ C30 C N N 85 NCQ C27 C N N 86 NCQ C73 C N N 87 NCQ C11 C N N 88 NCQ N7 N N N 89 NCQ C6 C Y N 90 NCQ C40 C Y N 91 NCQ C42 C Y N 92 NCQ C4 C Y N 93 NCQ C3 C Y N 94 NCQ N1 N Y N 95 NCQ C44 C Y N 96 NCQ C45 C Y N 97 NCQ C2 C Y N 98 NCQ C87 C Y N 99 NCQ C47 C Y N 100 NCQ C49 C Y N 101 NCQ C51 C Y N 102 NCQ C85 C Y N 103 NCQ N52 N N N 104 NCQ C54 C N N 105 NCQ O84 O N N 106 NCQ C55 C N N 107 NCQ C58 C N N 108 NCQ N61 N N N 109 NCQ C75 C N N 110 NCQ C72 C N N 111 NCQ C69 C N N 112 NCQ C66 C N N 113 NCQ C29 C N N 114 NCQ C31 C N N 115 NCQ H10 H N N 116 NCQ H10A H N N 117 NCQ H13 H N N 118 NCQ H13A H N N 119 NCQ H36 H N N 120 NCQ H36A H N N 121 NCQ H33 H N N 122 NCQ H33A H N N 123 NCQ H30 H N N 124 NCQ H30A H N N 125 NCQ H27 H N N 126 NCQ H27A H N N 127 NCQ H73 H N N 128 NCQ H73A H N N 129 NCQ H11 H N N 130 NCQ H11A H N N 131 NCQ HN7 H N N 132 NCQ H40 H N N 133 NCQ H42 H N N 134 NCQ H4 H N N 135 NCQ H45 H N N 136 NCQ H47 H N N 137 NCQ H49 H N N 138 NCQ H85 H N N 139 NCQ HN52 H N N 140 NCQ H55 H N N 141 NCQ H55A H N N 142 NCQ H58 H N N 143 NCQ H58A H N N 144 NCQ H75 H N N 145 NCQ H75A H N N 146 NCQ H72 H N N 147 NCQ H72A H N N 148 NCQ H69 H N N 149 NCQ H69A H N N 150 NCQ H66 H N N 151 NCQ H66A H N N 152 NCQ H29 H N N 153 NCQ H29A H N N 154 NCQ H31 H N N 155 NCQ H31A H N N 156 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DG OP3 P sing N N 1 DG OP3 HOP3 sing N N 2 DG P OP1 doub N N 3 DG P OP2 sing N N 4 DG P "O5'" sing N N 5 DG OP2 HOP2 sing N N 6 DG "O5'" "C5'" sing N N 7 DG "C5'" "C4'" sing N N 8 DG "C5'" "H5'" sing N N 9 DG "C5'" "H5''" sing N N 10 DG "C4'" "O4'" sing N N 11 DG "C4'" "C3'" sing N N 12 DG "C4'" "H4'" sing N N 13 DG "O4'" "C1'" sing N N 14 DG "C3'" "O3'" sing N N 15 DG "C3'" "C2'" sing N N 16 DG "C3'" "H3'" sing N N 17 DG "O3'" "HO3'" sing N N 18 DG "C2'" "C1'" sing N N 19 DG "C2'" "H2'" sing N N 20 DG "C2'" "H2''" sing N N 21 DG "C1'" N9 sing N N 22 DG "C1'" "H1'" sing N N 23 DG N9 C8 sing Y N 24 DG N9 C4 sing Y N 25 DG C8 N7 doub Y N 26 DG C8 H8 sing N N 27 DG N7 C5 sing Y N 28 DG C5 C6 sing N N 29 DG C5 C4 doub Y N 30 DG C6 O6 doub N N 31 DG C6 N1 sing N N 32 DG N1 C2 sing N N 33 DG N1 H1 sing N N 34 DG C2 N2 sing N N 35 DG C2 N3 doub N N 36 DG N2 H21 sing N N 37 DG N2 H22 sing N N 38 DG N3 C4 sing N N 39 DT OP3 P sing N N 40 DT OP3 HOP3 sing N N 41 DT P OP1 doub N N 42 DT P OP2 sing N N 43 DT P "O5'" sing N N 44 DT OP2 HOP2 sing N N 45 DT "O5'" "C5'" sing N N 46 DT "C5'" "C4'" sing N N 47 DT "C5'" "H5'" sing N N 48 DT "C5'" "H5''" sing N N 49 DT "C4'" "O4'" sing N N 50 DT "C4'" "C3'" sing N N 51 DT "C4'" "H4'" sing N N 52 DT "O4'" "C1'" sing N N 53 DT "C3'" "O3'" sing N N 54 DT "C3'" "C2'" sing N N 55 DT "C3'" "H3'" sing N N 56 DT "O3'" "HO3'" sing N N 57 DT "C2'" "C1'" sing N N 58 DT "C2'" "H2'" sing N N 59 DT "C2'" "H2''" sing N N 60 DT "C1'" N1 sing N N 61 DT "C1'" "H1'" sing N N 62 DT N1 C2 sing N N 63 DT N1 C6 sing N N 64 DT C2 O2 doub N N 65 DT C2 N3 sing N N 66 DT N3 C4 sing N N 67 DT N3 H3 sing N N 68 DT C4 O4 doub N N 69 DT C4 C5 sing N N 70 DT C5 C7 sing N N 71 DT C5 C6 doub N N 72 DT C7 H71 sing N N 73 DT C7 H72 sing N N 74 DT C7 H73 sing N N 75 DT C6 H6 sing N N 76 HOH O H1 sing N N 77 HOH O H2 sing N N 78 NCQ O39 C9 doub N N 79 NCQ N7 C9 sing N N 80 NCQ C9 C10 sing N N 81 NCQ C10 C13 sing N N 82 NCQ C10 H10 sing N N 83 NCQ C10 H10A sing N N 84 NCQ C13 N16 sing N N 85 NCQ C13 H13 sing N N 86 NCQ C13 H13A sing N N 87 NCQ N16 C36 sing N N 88 NCQ N16 C11 sing N N 89 NCQ C36 C33 sing N N 90 NCQ C36 H36 sing N N 91 NCQ C36 H36A sing N N 92 NCQ C33 C30 sing N N 93 NCQ C33 H33 sing N N 94 NCQ C33 H33A sing N N 95 NCQ C30 C27 sing N N 96 NCQ C30 H30 sing N N 97 NCQ C30 H30A sing N N 98 NCQ C73 C27 sing N N 99 NCQ C27 H27 sing N N 100 NCQ C27 H27A sing N N 101 NCQ C11 C73 sing N N 102 NCQ C73 H73 sing N N 103 NCQ C73 H73A sing N N 104 NCQ C11 H11 sing N N 105 NCQ C11 H11A sing N N 106 NCQ C6 N7 sing N N 107 NCQ N7 HN7 sing N N 108 NCQ C40 C6 doub Y N 109 NCQ C4 C6 sing Y N 110 NCQ C42 C40 sing Y N 111 NCQ C40 H40 sing N N 112 NCQ C44 C42 doub Y N 113 NCQ C42 H42 sing N N 114 NCQ C3 C4 doub Y N 115 NCQ C4 H4 sing N N 116 NCQ C44 C3 sing Y N 117 NCQ N1 C3 sing Y N 118 NCQ C87 N1 doub Y N 119 NCQ C45 C44 sing Y N 120 NCQ C2 C45 doub Y N 121 NCQ C45 H45 sing N N 122 NCQ C47 C2 sing Y N 123 NCQ C2 C87 sing Y N 124 NCQ C85 C87 sing Y N 125 NCQ C49 C47 doub Y N 126 NCQ C47 H47 sing N N 127 NCQ C49 C51 sing Y N 128 NCQ C49 H49 sing N N 129 NCQ N52 C51 sing N N 130 NCQ C51 C85 doub Y N 131 NCQ C85 H85 sing N N 132 NCQ N52 C54 sing N N 133 NCQ N52 HN52 sing N N 134 NCQ C55 C54 sing N N 135 NCQ C54 O84 doub N N 136 NCQ C55 C58 sing N N 137 NCQ C55 H55 sing N N 138 NCQ C55 H55A sing N N 139 NCQ N61 C58 sing N N 140 NCQ C58 H58 sing N N 141 NCQ C58 H58A sing N N 142 NCQ C75 N61 sing N N 143 NCQ N61 C31 sing N N 144 NCQ C72 C75 sing N N 145 NCQ C75 H75 sing N N 146 NCQ C75 H75A sing N N 147 NCQ C72 C69 sing N N 148 NCQ C72 H72 sing N N 149 NCQ C72 H72A sing N N 150 NCQ C69 C66 sing N N 151 NCQ C69 H69 sing N N 152 NCQ C69 H69A sing N N 153 NCQ C66 C29 sing N N 154 NCQ C66 H66 sing N N 155 NCQ C66 H66A sing N N 156 NCQ C31 C29 sing N N 157 NCQ C29 H29 sing N N 158 NCQ C29 H29A sing N N 159 NCQ C31 H31 sing N N 160 NCQ C31 H31A sing N N 161 # _ndb_struct_conf_na.entry_id 3EUM _ndb_struct_conf_na.feature 'quadruple helix' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 '3,6-Bis[3-(azepan-1-yl)propionamido]acridine' NCQ 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L1H _pdbx_initial_refinement_model.details 'PDB ID 1L1H' #