data_3F8F # _entry.id 3F8F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3F8F pdb_00003f8f 10.2210/pdb3f8f/pdb RCSB RCSB050276 ? ? WWPDB D_1000050276 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3F8B 'LmrR in drug free state' unspecified PDB 3F8C . unspecified # _pdbx_database_status.entry_id 3F8F _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-11-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Madoori, P.K.' 1 'Agustiandari, H.' 2 'Driessen, A.J.M.' 3 'Thunnissen, A.-M.W.H.' 4 # _citation.id primary _citation.title 'Structure of the transcriptional regulator LmrR and its mechanism of multidrug recognition.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 28 _citation.page_first 156 _citation.page_last 166 _citation.year 2009 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19096365 _citation.pdbx_database_id_DOI 10.1038/emboj.2008.263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Madoori, P.K.' 1 ? primary 'Agustiandari, H.' 2 ? primary 'Driessen, A.J.' 3 ? primary 'Thunnissen, A.M.' 4 ? # _cell.length_a 35.450 _cell.length_b 53.025 _cell.length_c 147.116 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3F8F _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3F8F _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, PadR-like family' 14764.789 2 ? ? ? ? 2 non-polymer syn DAUNOMYCIN 527.520 1 ? ? ? ? 3 water nat water 18.015 43 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'transcription regulator LmrR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYR LTEIGHENMRLAFESWSRVDKIIENLEANKKSEAIKSRWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYR LTEIGHENMRLAFESWSRVDKIIENLEANKKSEAIKSRWSHPQFEK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLU n 1 4 ILE n 1 5 PRO n 1 6 LYS n 1 7 GLU n 1 8 MET n 1 9 LEU n 1 10 ARG n 1 11 ALA n 1 12 GLN n 1 13 THR n 1 14 ASN n 1 15 VAL n 1 16 ILE n 1 17 LEU n 1 18 LEU n 1 19 ASN n 1 20 VAL n 1 21 LEU n 1 22 LYS n 1 23 GLN n 1 24 GLY n 1 25 ASP n 1 26 ASN n 1 27 TYR n 1 28 VAL n 1 29 TYR n 1 30 GLY n 1 31 ILE n 1 32 ILE n 1 33 LYS n 1 34 GLN n 1 35 VAL n 1 36 LYS n 1 37 GLU n 1 38 ALA n 1 39 SER n 1 40 ASN n 1 41 GLY n 1 42 GLU n 1 43 MET n 1 44 GLU n 1 45 LEU n 1 46 ASN n 1 47 GLU n 1 48 ALA n 1 49 THR n 1 50 LEU n 1 51 TYR n 1 52 THR n 1 53 ILE n 1 54 PHE n 1 55 LYS n 1 56 ARG n 1 57 LEU n 1 58 GLU n 1 59 LYS n 1 60 ASP n 1 61 GLY n 1 62 ILE n 1 63 ILE n 1 64 SER n 1 65 SER n 1 66 TYR n 1 67 TRP n 1 68 GLY n 1 69 ASP n 1 70 GLU n 1 71 SER n 1 72 GLN n 1 73 GLY n 1 74 GLY n 1 75 ARG n 1 76 ARG n 1 77 LYS n 1 78 TYR n 1 79 TYR n 1 80 ARG n 1 81 LEU n 1 82 THR n 1 83 GLU n 1 84 ILE n 1 85 GLY n 1 86 HIS n 1 87 GLU n 1 88 ASN n 1 89 MET n 1 90 ARG n 1 91 LEU n 1 92 ALA n 1 93 PHE n 1 94 GLU n 1 95 SER n 1 96 TRP n 1 97 SER n 1 98 ARG n 1 99 VAL n 1 100 ASP n 1 101 LYS n 1 102 ILE n 1 103 ILE n 1 104 GLU n 1 105 ASN n 1 106 LEU n 1 107 GLU n 1 108 ALA n 1 109 ASN n 1 110 LYS n 1 111 LYS n 1 112 SER n 1 113 GLU n 1 114 ALA n 1 115 ILE n 1 116 LYS n 1 117 SER n 1 118 ARG n 1 119 TRP n 1 120 SER n 1 121 HIS n 1 122 PRO n 1 123 GLN n 1 124 PHE n 1 125 GLU n 1 126 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lmrR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MG1363 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactococcus lactis subsp. cremoris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 416870 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Lactococcus lactis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1358 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain NZ9000 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNSC8048 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A2RI36_LACLM _struct_ref.pdbx_db_accession A2RI36 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYR LTEIGHENMRLAFESWSRVDKIIENLEANKKSEAIK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3F8F A 1 ? 116 ? A2RI36 1 ? 116 ? 1 116 2 1 3F8F B 1 ? 116 ? A2RI36 1 ? 116 ? 1 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3F8F SER A 117 ? UNP A2RI36 ? ? 'expression tag' 117 1 1 3F8F ARG A 118 ? UNP A2RI36 ? ? 'expression tag' 118 2 1 3F8F TRP A 119 ? UNP A2RI36 ? ? 'expression tag' 119 3 1 3F8F SER A 120 ? UNP A2RI36 ? ? 'expression tag' 120 4 1 3F8F HIS A 121 ? UNP A2RI36 ? ? 'expression tag' 121 5 1 3F8F PRO A 122 ? UNP A2RI36 ? ? 'expression tag' 122 6 1 3F8F GLN A 123 ? UNP A2RI36 ? ? 'expression tag' 123 7 1 3F8F PHE A 124 ? UNP A2RI36 ? ? 'expression tag' 124 8 1 3F8F GLU A 125 ? UNP A2RI36 ? ? 'expression tag' 125 9 1 3F8F LYS A 126 ? UNP A2RI36 ? ? 'expression tag' 126 10 2 3F8F SER B 117 ? UNP A2RI36 ? ? 'expression tag' 117 11 2 3F8F ARG B 118 ? UNP A2RI36 ? ? 'expression tag' 118 12 2 3F8F TRP B 119 ? UNP A2RI36 ? ? 'expression tag' 119 13 2 3F8F SER B 120 ? UNP A2RI36 ? ? 'expression tag' 120 14 2 3F8F HIS B 121 ? UNP A2RI36 ? ? 'expression tag' 121 15 2 3F8F PRO B 122 ? UNP A2RI36 ? ? 'expression tag' 122 16 2 3F8F GLN B 123 ? UNP A2RI36 ? ? 'expression tag' 123 17 2 3F8F PHE B 124 ? UNP A2RI36 ? ? 'expression tag' 124 18 2 3F8F GLU B 125 ? UNP A2RI36 ? ? 'expression tag' 125 19 2 3F8F LYS B 126 ? UNP A2RI36 ? ? 'expression tag' 126 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DM1 non-polymer . DAUNOMYCIN DAUNORUBICIN 'C27 H29 N O10' 527.520 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3F8F _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.570 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 47.46 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '25% PEG1500, 0.1M malonic acid/imidazol/boric (MIB) buffer, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-11-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_wavelength_list 0.92 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 # _reflns.entry_id 3F8F _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 49.884 _reflns.number_all 14655 _reflns.number_obs 14655 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_netI_over_sigmaI 6.600 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.400 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 2 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.32 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all 7225 _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.273 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_Rsym_value 0.273 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 3.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2074 _reflns_shell.percent_possible_all 99.90 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3F8F _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 49.880 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 100.000 _refine.ls_number_reflns_obs 13853 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;AUTHOR CHECKED USING MOLPROBITY AND IN COOT FOR TORSION ANGLES OUTSIDE AND ALL RESIDUES ARE WITHIN THE ALLOWED CONFORMATIONS. THERE ARE NO OUTLIERS. ; _refine.ls_R_factor_obs 0.23465 _refine.ls_R_factor_R_work 0.23205 _refine.ls_wR_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.27960 _refine.ls_wR_factor_R_free 0.273 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 762 _refine.B_iso_mean 24.347 _refine.aniso_B[1][1] -1.78 _refine.aniso_B[2][2] 3.32 _refine.aniso_B[3][3] -1.54 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.correlation_coeff_Fo_to_Fc 0.920 _refine.correlation_coeff_Fo_to_Fc_free 0.886 _refine.overall_SU_R_Cruickshank_DPI 0.273 _refine.overall_SU_R_free 0.227 _refine.pdbx_overall_ESU_R 0.289 _refine.pdbx_overall_ESU_R_Free 0.233 _refine.overall_SU_ML 0.171 _refine.overall_SU_B 13.402 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.812 _refine.B_iso_max 109.23 _refine.B_iso_min 4.98 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 14615 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 3F8B _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1832 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 1913 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 49.880 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1899 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.651 1.988 ? 2552 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.729 5.000 ? 222 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.087 24.681 ? 94 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.916 15.000 ? 371 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.174 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.063 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.001 0.020 ? 1395 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.217 0.200 ? 819 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.316 0.200 ? 1309 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.167 0.200 ? 75 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.183 0.200 ? 53 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.166 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.684 1.500 ? 1148 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.131 2.000 ? 1771 'X-RAY DIFFRACTION' ? r_scbond_it 1.687 3.000 ? 970 'X-RAY DIFFRACTION' ? r_scangle_it 2.798 4.500 ? 781 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 819 0.77 0.50 'medium positional' 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 A 819 0.46 2.00 'medium thermal' 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 1030 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.233 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A LYS 6 . A ASP 69 . A LYS 6 A ASP 69 4 ? 1 2 1 B LYS 6 . B ASP 69 . B LYS 6 B ASP 69 4 ? 1 1 2 A ARG 76 . A LYS 110 . A ARG 76 A LYS 110 4 ? 1 2 2 B ARG 76 . B LYS 110 . B ARG 76 B LYS 110 4 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3F8F _struct.title 'Crystal structure of multidrug binding transcriptional regulator LmrR complexed with Daunomycin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3F8F _struct_keywords.text 'Winged helix turn helix, TRANSCRIPTION REGULATOR' _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 5 ? GLY A 24 ? PRO A 5 GLY A 24 1 ? 20 HELX_P HELX_P2 2 TYR A 27 ? SER A 39 ? TYR A 27 SER A 39 1 ? 13 HELX_P HELX_P3 3 ASN A 46 ? ASP A 60 ? ASN A 46 ASP A 60 1 ? 15 HELX_P HELX_P4 4 THR A 82 ? LYS A 116 ? THR A 82 LYS A 116 1 ? 35 HELX_P HELX_P5 5 PRO B 5 ? GLY B 24 ? PRO B 5 GLY B 24 1 ? 20 HELX_P HELX_P6 6 TYR B 27 ? ALA B 38 ? TYR B 27 ALA B 38 1 ? 12 HELX_P HELX_P7 7 ASN B 46 ? ASP B 60 ? ASN B 46 ASP B 60 1 ? 15 HELX_P HELX_P8 8 THR B 82 ? GLU B 113 ? THR B 82 GLU B 113 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 63 ? TRP A 67 ? ILE A 63 TRP A 67 A 2 LYS A 77 ? LEU A 81 ? LYS A 77 LEU A 81 B 1 ILE B 63 ? GLY B 68 ? ILE B 63 GLY B 68 B 2 ARG B 76 ? LEU B 81 ? ARG B 76 LEU B 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 66 ? N TYR A 66 O TYR A 78 ? O TYR A 78 B 1 2 N TYR B 66 ? N TYR B 66 O TYR B 78 ? O TYR B 78 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id DM1 _struct_site.pdbx_auth_seq_id 127 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE DM1 A 127' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 MET A 8 ? MET A 8 . ? 1_555 ? 2 AC1 8 VAL A 15 ? VAL A 15 . ? 1_555 ? 3 AC1 8 MET A 89 ? MET A 89 . ? 1_555 ? 4 AC1 8 PHE A 93 ? PHE A 93 . ? 1_555 ? 5 AC1 8 TRP A 96 ? TRP A 96 . ? 1_555 ? 6 AC1 8 HOH D . ? HOH A 147 . ? 1_555 ? 7 AC1 8 VAL B 15 ? VAL B 15 . ? 1_555 ? 8 AC1 8 TRP B 96 ? TRP B 96 . ? 1_555 ? # _atom_sites.entry_id 3F8F _atom_sites.fract_transf_matrix[1][1] 0.028209 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018859 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006797 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET GLY A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 MET 43 43 43 MET MET A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 SER 71 71 ? ? ? A . n A 1 72 GLN 72 72 ? ? ? A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 MET 89 89 89 MET MET A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 SER 117 117 ? ? ? A . n A 1 118 ARG 118 118 ? ? ? A . n A 1 119 TRP 119 119 ? ? ? A . n A 1 120 SER 120 120 ? ? ? A . n A 1 121 HIS 121 121 ? ? ? A . n A 1 122 PRO 122 122 ? ? ? A . n A 1 123 GLN 123 123 ? ? ? A . n A 1 124 PHE 124 124 ? ? ? A . n A 1 125 GLU 125 125 ? ? ? A . n A 1 126 LYS 126 126 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 GLU 3 3 ? ? ? B . n B 1 4 ILE 4 4 ? ? ? B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 MET 8 8 8 MET MET B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 GLN 12 12 12 GLN GLN B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 ASN 14 14 14 ASN ASN B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 GLN 23 23 23 GLN GLN B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 ASN 26 26 26 ASN ASN B . n B 1 27 TYR 27 27 27 TYR TYR B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 TYR 29 29 29 TYR TYR B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 GLN 34 34 34 GLN GLN B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 MET 43 43 43 MET MET B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 LEU 45 45 45 LEU LEU B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 TYR 51 51 51 TYR TYR B . n B 1 52 THR 52 52 52 THR THR B . n B 1 53 ILE 53 53 53 ILE ILE B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 ARG 56 56 56 ARG ARG B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 LYS 59 59 59 LYS LYS B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 TYR 66 66 66 TYR TYR B . n B 1 67 TRP 67 67 67 TRP TRP B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 ASP 69 69 69 ASP ASP B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 SER 71 71 71 SER SER B . n B 1 72 GLN 72 72 72 GLN GLN B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 TYR 78 78 78 TYR TYR B . n B 1 79 TYR 79 79 79 TYR TYR B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 GLU 83 83 83 GLU GLU B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 GLY 85 85 85 GLY GLY B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 MET 89 89 89 MET MET B . n B 1 90 ARG 90 90 90 ARG ARG B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 PHE 93 93 93 PHE PHE B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 SER 95 95 95 SER SER B . n B 1 96 TRP 96 96 96 TRP TRP B . n B 1 97 SER 97 97 97 SER SER B . n B 1 98 ARG 98 98 98 ARG ARG B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 LYS 101 101 101 LYS LYS B . n B 1 102 ILE 102 102 102 ILE ILE B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 ASN 105 105 105 ASN ASN B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 ASN 109 109 109 ASN ASN B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 LYS 111 111 111 LYS LYS B . n B 1 112 SER 112 112 112 SER SER B . n B 1 113 GLU 113 113 113 GLU GLU B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 ILE 115 115 115 ILE ILE B . n B 1 116 LYS 116 116 ? ? ? B . n B 1 117 SER 117 117 ? ? ? B . n B 1 118 ARG 118 118 ? ? ? B . n B 1 119 TRP 119 119 ? ? ? B . n B 1 120 SER 120 120 ? ? ? B . n B 1 121 HIS 121 121 ? ? ? B . n B 1 122 PRO 122 122 ? ? ? B . n B 1 123 GLN 123 123 ? ? ? B . n B 1 124 PHE 124 124 ? ? ? B . n B 1 125 GLU 125 125 ? ? ? B . n B 1 126 LYS 126 126 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DM1 1 127 1 DM1 DM1 A . D 3 HOH 1 128 1 HOH HOH A . D 3 HOH 2 129 4 HOH HOH A . D 3 HOH 3 131 8 HOH HOH A . D 3 HOH 4 132 9 HOH HOH A . D 3 HOH 5 133 10 HOH HOH A . D 3 HOH 6 134 14 HOH HOH A . D 3 HOH 7 136 16 HOH HOH A . D 3 HOH 8 139 19 HOH HOH A . D 3 HOH 9 140 20 HOH HOH A . D 3 HOH 10 141 21 HOH HOH A . D 3 HOH 11 143 23 HOH HOH A . D 3 HOH 12 147 27 HOH HOH A . D 3 HOH 13 149 29 HOH HOH A . D 3 HOH 14 157 37 HOH HOH A . D 3 HOH 15 158 38 HOH HOH A . E 3 HOH 1 127 2 HOH HOH B . E 3 HOH 2 128 3 HOH HOH B . E 3 HOH 3 129 6 HOH HOH B . E 3 HOH 4 130 7 HOH HOH B . E 3 HOH 5 131 11 HOH HOH B . E 3 HOH 6 132 12 HOH HOH B . E 3 HOH 7 133 13 HOH HOH B . E 3 HOH 8 134 5 HOH HOH B . E 3 HOH 9 135 15 HOH HOH B . E 3 HOH 10 137 17 HOH HOH B . E 3 HOH 11 138 18 HOH HOH B . E 3 HOH 12 142 22 HOH HOH B . E 3 HOH 13 144 24 HOH HOH B . E 3 HOH 14 145 25 HOH HOH B . E 3 HOH 15 146 26 HOH HOH B . E 3 HOH 16 148 28 HOH HOH B . E 3 HOH 17 150 30 HOH HOH B . E 3 HOH 18 151 31 HOH HOH B . E 3 HOH 19 152 32 HOH HOH B . E 3 HOH 20 153 33 HOH HOH B . E 3 HOH 21 154 34 HOH HOH B . E 3 HOH 22 155 35 HOH HOH B . E 3 HOH 23 156 36 HOH HOH B . E 3 HOH 24 159 39 HOH HOH B . E 3 HOH 25 160 40 HOH HOH B . E 3 HOH 26 161 41 HOH HOH B . E 3 HOH 27 162 42 HOH HOH B . E 3 HOH 28 163 43 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4090 ? 1 MORE -22 ? 1 'SSA (A^2)' 13720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-04-09 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Source and taxonomy' 4 2 'Structure model' 'Version format compliance' 5 3 'Structure model' 'Database references' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ncs_dom_lim 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 4 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 5 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 6 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 7 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 8 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 9 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 10 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 11 4 'Structure model' '_struct_ref_seq_dif.details' 12 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 34.5380 36.2156 48.4598 0.0765 -0.0548 0.0968 -0.0735 0.0126 -0.0491 12.2559 8.1259 28.9968 -6.8484 -9.8544 6.4035 0.0978 -0.2272 0.1294 -0.4624 0.1925 -0.1772 0.2305 -0.4230 0.2490 'X-RAY DIFFRACTION' 2 ? refined 22.8049 32.8752 64.6123 0.0655 0.2169 0.1160 -0.0406 0.0081 -0.0479 3.2259 1.7696 5.1815 -0.1564 -2.9824 1.2800 -0.1052 0.0264 0.0788 -0.3871 -0.0925 0.1886 0.0726 0.4727 -0.4412 'X-RAY DIFFRACTION' 3 ? refined 28.6195 26.0497 63.5564 0.2109 0.1944 0.0491 0.0430 0.0288 0.0107 7.1333 12.0382 10.6275 4.2598 5.1893 9.0127 0.1528 0.0901 -0.2429 -0.4296 -0.7236 -0.4258 0.2825 1.1231 0.6145 'X-RAY DIFFRACTION' 4 ? refined 28.8923 42.7832 66.5509 0.1940 0.3017 0.0472 -0.0623 -0.0335 0.0390 23.0502 9.5229 3.5474 -3.4355 -2.3814 5.8092 -0.2258 0.1135 0.1122 -0.3857 0.4067 -0.4433 0.1880 -0.6906 0.5167 'X-RAY DIFFRACTION' 5 ? refined 21.0523 39.9395 75.6152 -0.0357 0.3981 0.1579 0.0213 -0.0505 -0.0597 5.5905 11.7138 5.6381 -0.5689 3.0539 4.0688 -0.1558 0.0981 0.0577 -0.7437 -0.0082 -0.6983 0.8427 0.1391 -0.0733 'X-RAY DIFFRACTION' 6 ? refined 22.3580 35.4631 77.5082 -0.0009 0.3333 0.1158 0.0389 0.0533 -0.0262 6.1911 7.9094 16.5187 -3.7701 1.1844 -0.3704 -0.4133 0.4983 -0.0849 -0.6329 -0.5114 -0.3627 0.4095 0.2669 0.7013 'X-RAY DIFFRACTION' 7 ? refined 13.8368 43.9897 58.2011 0.1336 0.3974 0.2189 0.1046 0.0113 -0.0444 1.1624 0.2323 28.2425 0.5170 -4.3532 -1.7697 -0.0485 -0.1586 0.2071 -0.1893 0.3247 0.1923 -0.2990 -0.5628 -1.3495 'X-RAY DIFFRACTION' 8 ? refined 15.7631 41.2808 39.0573 0.0774 0.1261 0.1736 0.0156 0.0325 0.0110 1.8388 5.1804 39.1523 -2.0046 -1.3518 7.0688 -0.6057 0.1294 0.4763 0.0971 -0.3073 0.0262 0.3226 0.6164 0.1169 'X-RAY DIFFRACTION' 9 ? refined 14.7350 39.6184 22.6877 0.6669 0.2780 0.2059 -0.0353 -0.0065 -0.0067 10.2095 11.4264 49.0020 -6.8898 13.2866 5.6932 0.9113 -0.1245 -0.7868 0.4071 -0.2203 -0.3704 -1.0866 -0.5959 -1.0243 'X-RAY DIFFRACTION' 10 ? refined 25.0319 48.8239 50.8369 0.2430 0.6270 0.3582 -0.0196 -0.0725 -0.4894 32.1312 37.1399 55.6904 -6.5764 -8.1404 -2.2889 0.1991 -0.2923 0.0933 -4.0596 3.3220 0.5815 1.9543 -1.1578 -0.4599 'X-RAY DIFFRACTION' 11 ? refined 26.1396 45.8743 34.1925 0.1392 0.0950 0.1742 0.0309 -0.0067 -0.0177 3.6014 2.9099 4.5050 -0.7530 -0.4790 -0.8491 -0.1132 0.1533 -0.0400 0.2059 -0.0471 -0.0037 -0.0692 -0.0926 -0.2456 'X-RAY DIFFRACTION' 12 ? refined 17.6269 51.4637 35.7054 0.1596 0.1114 0.1699 0.1385 0.0109 -0.0025 12.8871 7.8082 10.8286 9.9859 1.4839 0.2840 -0.0196 -0.0320 0.0516 -0.6446 0.6210 0.7241 -0.1212 -0.0232 -0.7686 'X-RAY DIFFRACTION' 13 ? refined 32.0577 51.9098 38.6868 0.1791 -0.0422 0.1563 -0.0448 0.0975 0.0224 12.1999 24.7394 4.6771 -12.0581 2.3921 -9.7096 0.4890 0.1383 -0.6273 0.0019 -0.2538 -0.1632 -0.5785 -0.0508 -0.2437 'X-RAY DIFFRACTION' 14 ? refined 38.6904 42.9300 39.5692 0.0926 0.1097 0.1523 0.0121 0.0547 0.0282 27.4934 27.9044 6.0353 0.2904 2.5235 5.5615 -0.0992 -0.0720 0.1712 -0.6492 0.9949 -0.7421 0.6147 0.3682 1.0276 'X-RAY DIFFRACTION' 15 ? refined 36.7835 50.8141 22.6159 0.1785 0.0864 0.1618 0.0434 0.0779 -0.0177 3.2214 9.0217 13.5469 5.3902 -5.4879 -9.2836 0.1688 -0.1810 0.0122 0.3910 -0.1793 0.1180 -0.2702 0.1146 0.1746 'X-RAY DIFFRACTION' 16 ? refined 31.8111 35.6084 34.9200 0.1491 0.0151 0.1573 0.0126 0.0352 -0.0152 0.0454 3.3442 1.5174 0.3652 -0.0746 0.1518 0.0029 0.0173 -0.0201 0.1257 0.0381 -0.1441 -0.5553 0.4415 0.1524 'X-RAY DIFFRACTION' 17 ? refined 20.7241 27.1383 53.4677 0.1431 0.1097 0.1190 -0.0649 -0.0110 -0.0358 6.2092 6.9228 12.9325 5.9024 -2.6901 -3.7840 0.0701 -0.0697 -0.0003 0.2764 -0.7823 0.0175 0.1917 0.2040 -0.6616 'X-RAY DIFFRACTION' 18 ? refined 11.1701 21.3921 65.7715 0.0991 0.7009 0.3417 -0.2118 -0.0494 0.0692 28.2091 50.1212 49.7736 -24.6800 -3.8801 -9.3267 1.0683 -1.7405 0.6722 -0.7718 -1.0108 -1.9328 0.5521 3.3078 -3.1847 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 10 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 11 A 34 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 35 A 51 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 52 A 60 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 61 A 70 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 74 A 81 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 82 A 96 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 97 A 108 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 A 109 A 116 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 B 6 B 10 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 B 11 B 34 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 B 35 B 47 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 B 48 B 55 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 B 56 B 63 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 B 64 B 78 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 B 79 B 94 ? . . . . ? 'X-RAY DIFFRACTION' 17 17 B 95 B 109 ? . . . . ? 'X-RAY DIFFRACTION' 18 18 B 110 B 115 ? . . . . ? # _pdbx_phasing_MR.entry_id 3F8F _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 54.510 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.100 _pdbx_phasing_MR.d_res_low_rotation 73.630 _pdbx_phasing_MR.d_res_high_translation 2.100 _pdbx_phasing_MR.d_res_low_translation 73.630 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 1 SCALA 3.2.25 21/9/2006 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC 'Quantum 315' ? ? ? ? 'data collection' ? ? ? 6 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 75 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -165.63 _pdbx_validate_torsion.psi 89.51 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 1 ? CB ? A MET 1 CB 2 1 Y 1 A MET 1 ? CG ? A MET 1 CG 3 1 Y 1 A MET 1 ? SD ? A MET 1 SD 4 1 Y 1 A MET 1 ? CE ? A MET 1 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 71 ? A SER 71 2 1 Y 1 A GLN 72 ? A GLN 72 3 1 Y 1 A SER 117 ? A SER 117 4 1 Y 1 A ARG 118 ? A ARG 118 5 1 Y 1 A TRP 119 ? A TRP 119 6 1 Y 1 A SER 120 ? A SER 120 7 1 Y 1 A HIS 121 ? A HIS 121 8 1 Y 1 A PRO 122 ? A PRO 122 9 1 Y 1 A GLN 123 ? A GLN 123 10 1 Y 1 A PHE 124 ? A PHE 124 11 1 Y 1 A GLU 125 ? A GLU 125 12 1 Y 1 A LYS 126 ? A LYS 126 13 1 Y 1 B MET 1 ? B MET 1 14 1 Y 1 B ALA 2 ? B ALA 2 15 1 Y 1 B GLU 3 ? B GLU 3 16 1 Y 1 B ILE 4 ? B ILE 4 17 1 Y 1 B LYS 116 ? B LYS 116 18 1 Y 1 B SER 117 ? B SER 117 19 1 Y 1 B ARG 118 ? B ARG 118 20 1 Y 1 B TRP 119 ? B TRP 119 21 1 Y 1 B SER 120 ? B SER 120 22 1 Y 1 B HIS 121 ? B HIS 121 23 1 Y 1 B PRO 122 ? B PRO 122 24 1 Y 1 B GLN 123 ? B GLN 123 25 1 Y 1 B PHE 124 ? B PHE 124 26 1 Y 1 B GLU 125 ? B GLU 125 27 1 Y 1 B LYS 126 ? B LYS 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DM1 C1 C Y N 74 DM1 C2 C Y N 75 DM1 C3 C Y N 76 DM1 C4 C Y N 77 DM1 O4 O N N 78 DM1 C5 C Y N 79 DM1 C6 C N N 80 DM1 O6 O N N 81 DM1 C7 C Y N 82 DM1 C8 C Y N 83 DM1 O8 O N N 84 DM1 C9 C Y N 85 DM1 C10 C N S 86 DM1 O10 O N N 87 DM1 C11 C N N 88 DM1 C12 C N S 89 DM1 O12 O N N 90 DM1 C13 C N N 91 DM1 O13 O N N 92 DM1 C14 C N N 93 DM1 C15 C N N 94 DM1 C16 C Y N 95 DM1 C17 C Y N 96 DM1 O17 O N N 97 DM1 C18 C Y N 98 DM1 C19 C N N 99 DM1 O19 O N N 100 DM1 C20 C Y N 101 DM1 C21 C N N 102 DM1 "C1'" C N R 103 DM1 "C2'" C N N 104 DM1 "C3'" C N S 105 DM1 "N3'" N N N 106 DM1 "C4'" C N S 107 DM1 "O4'" O N N 108 DM1 "C5'" C N S 109 DM1 "O5'" O N N 110 DM1 "C6'" C N N 111 DM1 H1 H N N 112 DM1 H2 H N N 113 DM1 H3 H N N 114 DM1 HO8 H N N 115 DM1 H10 H N N 116 DM1 H111 H N N 117 DM1 H112 H N N 118 DM1 HO12 H N N 119 DM1 H141 H N N 120 DM1 H142 H N N 121 DM1 H143 H N N 122 DM1 H151 H N N 123 DM1 H152 H N N 124 DM1 HO17 H N N 125 DM1 H211 H N N 126 DM1 H212 H N N 127 DM1 H213 H N N 128 DM1 "H1'" H N N 129 DM1 "H2'1" H N N 130 DM1 "H2'2" H N N 131 DM1 "H3'" H N N 132 DM1 "HN'1" H N N 133 DM1 "HN'2" H N N 134 DM1 "H4'" H N N 135 DM1 "HO4'" H N N 136 DM1 "H5'" H N N 137 DM1 "H6'1" H N N 138 DM1 "H6'2" H N N 139 DM1 "H6'3" H N N 140 GLN N N N N 141 GLN CA C N S 142 GLN C C N N 143 GLN O O N N 144 GLN CB C N N 145 GLN CG C N N 146 GLN CD C N N 147 GLN OE1 O N N 148 GLN NE2 N N N 149 GLN OXT O N N 150 GLN H H N N 151 GLN H2 H N N 152 GLN HA H N N 153 GLN HB2 H N N 154 GLN HB3 H N N 155 GLN HG2 H N N 156 GLN HG3 H N N 157 GLN HE21 H N N 158 GLN HE22 H N N 159 GLN HXT H N N 160 GLU N N N N 161 GLU CA C N S 162 GLU C C N N 163 GLU O O N N 164 GLU CB C N N 165 GLU CG C N N 166 GLU CD C N N 167 GLU OE1 O N N 168 GLU OE2 O N N 169 GLU OXT O N N 170 GLU H H N N 171 GLU H2 H N N 172 GLU HA H N N 173 GLU HB2 H N N 174 GLU HB3 H N N 175 GLU HG2 H N N 176 GLU HG3 H N N 177 GLU HE2 H N N 178 GLU HXT H N N 179 GLY N N N N 180 GLY CA C N N 181 GLY C C N N 182 GLY O O N N 183 GLY OXT O N N 184 GLY H H N N 185 GLY H2 H N N 186 GLY HA2 H N N 187 GLY HA3 H N N 188 GLY HXT H N N 189 HIS N N N N 190 HIS CA C N S 191 HIS C C N N 192 HIS O O N N 193 HIS CB C N N 194 HIS CG C Y N 195 HIS ND1 N Y N 196 HIS CD2 C Y N 197 HIS CE1 C Y N 198 HIS NE2 N Y N 199 HIS OXT O N N 200 HIS H H N N 201 HIS H2 H N N 202 HIS HA H N N 203 HIS HB2 H N N 204 HIS HB3 H N N 205 HIS HD1 H N N 206 HIS HD2 H N N 207 HIS HE1 H N N 208 HIS HE2 H N N 209 HIS HXT H N N 210 HOH O O N N 211 HOH H1 H N N 212 HOH H2 H N N 213 ILE N N N N 214 ILE CA C N S 215 ILE C C N N 216 ILE O O N N 217 ILE CB C N S 218 ILE CG1 C N N 219 ILE CG2 C N N 220 ILE CD1 C N N 221 ILE OXT O N N 222 ILE H H N N 223 ILE H2 H N N 224 ILE HA H N N 225 ILE HB H N N 226 ILE HG12 H N N 227 ILE HG13 H N N 228 ILE HG21 H N N 229 ILE HG22 H N N 230 ILE HG23 H N N 231 ILE HD11 H N N 232 ILE HD12 H N N 233 ILE HD13 H N N 234 ILE HXT H N N 235 LEU N N N N 236 LEU CA C N S 237 LEU C C N N 238 LEU O O N N 239 LEU CB C N N 240 LEU CG C N N 241 LEU CD1 C N N 242 LEU CD2 C N N 243 LEU OXT O N N 244 LEU H H N N 245 LEU H2 H N N 246 LEU HA H N N 247 LEU HB2 H N N 248 LEU HB3 H N N 249 LEU HG H N N 250 LEU HD11 H N N 251 LEU HD12 H N N 252 LEU HD13 H N N 253 LEU HD21 H N N 254 LEU HD22 H N N 255 LEU HD23 H N N 256 LEU HXT H N N 257 LYS N N N N 258 LYS CA C N S 259 LYS C C N N 260 LYS O O N N 261 LYS CB C N N 262 LYS CG C N N 263 LYS CD C N N 264 LYS CE C N N 265 LYS NZ N N N 266 LYS OXT O N N 267 LYS H H N N 268 LYS H2 H N N 269 LYS HA H N N 270 LYS HB2 H N N 271 LYS HB3 H N N 272 LYS HG2 H N N 273 LYS HG3 H N N 274 LYS HD2 H N N 275 LYS HD3 H N N 276 LYS HE2 H N N 277 LYS HE3 H N N 278 LYS HZ1 H N N 279 LYS HZ2 H N N 280 LYS HZ3 H N N 281 LYS HXT H N N 282 MET N N N N 283 MET CA C N S 284 MET C C N N 285 MET O O N N 286 MET CB C N N 287 MET CG C N N 288 MET SD S N N 289 MET CE C N N 290 MET OXT O N N 291 MET H H N N 292 MET H2 H N N 293 MET HA H N N 294 MET HB2 H N N 295 MET HB3 H N N 296 MET HG2 H N N 297 MET HG3 H N N 298 MET HE1 H N N 299 MET HE2 H N N 300 MET HE3 H N N 301 MET HXT H N N 302 PHE N N N N 303 PHE CA C N S 304 PHE C C N N 305 PHE O O N N 306 PHE CB C N N 307 PHE CG C Y N 308 PHE CD1 C Y N 309 PHE CD2 C Y N 310 PHE CE1 C Y N 311 PHE CE2 C Y N 312 PHE CZ C Y N 313 PHE OXT O N N 314 PHE H H N N 315 PHE H2 H N N 316 PHE HA H N N 317 PHE HB2 H N N 318 PHE HB3 H N N 319 PHE HD1 H N N 320 PHE HD2 H N N 321 PHE HE1 H N N 322 PHE HE2 H N N 323 PHE HZ H N N 324 PHE HXT H N N 325 PRO N N N N 326 PRO CA C N S 327 PRO C C N N 328 PRO O O N N 329 PRO CB C N N 330 PRO CG C N N 331 PRO CD C N N 332 PRO OXT O N N 333 PRO H H N N 334 PRO HA H N N 335 PRO HB2 H N N 336 PRO HB3 H N N 337 PRO HG2 H N N 338 PRO HG3 H N N 339 PRO HD2 H N N 340 PRO HD3 H N N 341 PRO HXT H N N 342 SER N N N N 343 SER CA C N S 344 SER C C N N 345 SER O O N N 346 SER CB C N N 347 SER OG O N N 348 SER OXT O N N 349 SER H H N N 350 SER H2 H N N 351 SER HA H N N 352 SER HB2 H N N 353 SER HB3 H N N 354 SER HG H N N 355 SER HXT H N N 356 THR N N N N 357 THR CA C N S 358 THR C C N N 359 THR O O N N 360 THR CB C N R 361 THR OG1 O N N 362 THR CG2 C N N 363 THR OXT O N N 364 THR H H N N 365 THR H2 H N N 366 THR HA H N N 367 THR HB H N N 368 THR HG1 H N N 369 THR HG21 H N N 370 THR HG22 H N N 371 THR HG23 H N N 372 THR HXT H N N 373 TRP N N N N 374 TRP CA C N S 375 TRP C C N N 376 TRP O O N N 377 TRP CB C N N 378 TRP CG C Y N 379 TRP CD1 C Y N 380 TRP CD2 C Y N 381 TRP NE1 N Y N 382 TRP CE2 C Y N 383 TRP CE3 C Y N 384 TRP CZ2 C Y N 385 TRP CZ3 C Y N 386 TRP CH2 C Y N 387 TRP OXT O N N 388 TRP H H N N 389 TRP H2 H N N 390 TRP HA H N N 391 TRP HB2 H N N 392 TRP HB3 H N N 393 TRP HD1 H N N 394 TRP HE1 H N N 395 TRP HE3 H N N 396 TRP HZ2 H N N 397 TRP HZ3 H N N 398 TRP HH2 H N N 399 TRP HXT H N N 400 TYR N N N N 401 TYR CA C N S 402 TYR C C N N 403 TYR O O N N 404 TYR CB C N N 405 TYR CG C Y N 406 TYR CD1 C Y N 407 TYR CD2 C Y N 408 TYR CE1 C Y N 409 TYR CE2 C Y N 410 TYR CZ C Y N 411 TYR OH O N N 412 TYR OXT O N N 413 TYR H H N N 414 TYR H2 H N N 415 TYR HA H N N 416 TYR HB2 H N N 417 TYR HB3 H N N 418 TYR HD1 H N N 419 TYR HD2 H N N 420 TYR HE1 H N N 421 TYR HE2 H N N 422 TYR HH H N N 423 TYR HXT H N N 424 VAL N N N N 425 VAL CA C N S 426 VAL C C N N 427 VAL O O N N 428 VAL CB C N N 429 VAL CG1 C N N 430 VAL CG2 C N N 431 VAL OXT O N N 432 VAL H H N N 433 VAL H2 H N N 434 VAL HA H N N 435 VAL HB H N N 436 VAL HG11 H N N 437 VAL HG12 H N N 438 VAL HG13 H N N 439 VAL HG21 H N N 440 VAL HG22 H N N 441 VAL HG23 H N N 442 VAL HXT H N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DM1 C1 C2 doub Y N 70 DM1 C1 C20 sing Y N 71 DM1 C1 H1 sing N N 72 DM1 C2 C3 sing Y N 73 DM1 C2 H2 sing N N 74 DM1 C3 C4 doub Y N 75 DM1 C3 H3 sing N N 76 DM1 C4 O4 sing N N 77 DM1 C4 C5 sing Y N 78 DM1 O4 C21 sing N N 79 DM1 C5 C6 sing N N 80 DM1 C5 C20 doub Y N 81 DM1 C6 O6 doub N N 82 DM1 C6 C7 sing N N 83 DM1 C7 C8 doub Y N 84 DM1 C7 C18 sing Y N 85 DM1 C8 O8 sing N N 86 DM1 C8 C9 sing Y N 87 DM1 O8 HO8 sing N N 88 DM1 C9 C10 sing N N 89 DM1 C9 C16 doub Y N 90 DM1 C10 O10 sing N N 91 DM1 C10 C11 sing N N 92 DM1 C10 H10 sing N N 93 DM1 O10 "C1'" sing N N 94 DM1 C11 C12 sing N N 95 DM1 C11 H111 sing N N 96 DM1 C11 H112 sing N N 97 DM1 C12 O12 sing N N 98 DM1 C12 C13 sing N N 99 DM1 C12 C15 sing N N 100 DM1 O12 HO12 sing N N 101 DM1 C13 O13 doub N N 102 DM1 C13 C14 sing N N 103 DM1 C14 H141 sing N N 104 DM1 C14 H142 sing N N 105 DM1 C14 H143 sing N N 106 DM1 C15 C16 sing N N 107 DM1 C15 H151 sing N N 108 DM1 C15 H152 sing N N 109 DM1 C16 C17 sing Y N 110 DM1 C17 O17 sing N N 111 DM1 C17 C18 doub Y N 112 DM1 O17 HO17 sing N N 113 DM1 C18 C19 sing N N 114 DM1 C19 O19 doub N N 115 DM1 C19 C20 sing N N 116 DM1 C21 H211 sing N N 117 DM1 C21 H212 sing N N 118 DM1 C21 H213 sing N N 119 DM1 "C1'" "C2'" sing N N 120 DM1 "C1'" "O5'" sing N N 121 DM1 "C1'" "H1'" sing N N 122 DM1 "C2'" "C3'" sing N N 123 DM1 "C2'" "H2'1" sing N N 124 DM1 "C2'" "H2'2" sing N N 125 DM1 "C3'" "N3'" sing N N 126 DM1 "C3'" "C4'" sing N N 127 DM1 "C3'" "H3'" sing N N 128 DM1 "N3'" "HN'1" sing N N 129 DM1 "N3'" "HN'2" sing N N 130 DM1 "C4'" "O4'" sing N N 131 DM1 "C4'" "C5'" sing N N 132 DM1 "C4'" "H4'" sing N N 133 DM1 "O4'" "HO4'" sing N N 134 DM1 "C5'" "O5'" sing N N 135 DM1 "C5'" "C6'" sing N N 136 DM1 "C5'" "H5'" sing N N 137 DM1 "C6'" "H6'1" sing N N 138 DM1 "C6'" "H6'2" sing N N 139 DM1 "C6'" "H6'3" sing N N 140 GLN N CA sing N N 141 GLN N H sing N N 142 GLN N H2 sing N N 143 GLN CA C sing N N 144 GLN CA CB sing N N 145 GLN CA HA sing N N 146 GLN C O doub N N 147 GLN C OXT sing N N 148 GLN CB CG sing N N 149 GLN CB HB2 sing N N 150 GLN CB HB3 sing N N 151 GLN CG CD sing N N 152 GLN CG HG2 sing N N 153 GLN CG HG3 sing N N 154 GLN CD OE1 doub N N 155 GLN CD NE2 sing N N 156 GLN NE2 HE21 sing N N 157 GLN NE2 HE22 sing N N 158 GLN OXT HXT sing N N 159 GLU N CA sing N N 160 GLU N H sing N N 161 GLU N H2 sing N N 162 GLU CA C sing N N 163 GLU CA CB sing N N 164 GLU CA HA sing N N 165 GLU C O doub N N 166 GLU C OXT sing N N 167 GLU CB CG sing N N 168 GLU CB HB2 sing N N 169 GLU CB HB3 sing N N 170 GLU CG CD sing N N 171 GLU CG HG2 sing N N 172 GLU CG HG3 sing N N 173 GLU CD OE1 doub N N 174 GLU CD OE2 sing N N 175 GLU OE2 HE2 sing N N 176 GLU OXT HXT sing N N 177 GLY N CA sing N N 178 GLY N H sing N N 179 GLY N H2 sing N N 180 GLY CA C sing N N 181 GLY CA HA2 sing N N 182 GLY CA HA3 sing N N 183 GLY C O doub N N 184 GLY C OXT sing N N 185 GLY OXT HXT sing N N 186 HIS N CA sing N N 187 HIS N H sing N N 188 HIS N H2 sing N N 189 HIS CA C sing N N 190 HIS CA CB sing N N 191 HIS CA HA sing N N 192 HIS C O doub N N 193 HIS C OXT sing N N 194 HIS CB CG sing N N 195 HIS CB HB2 sing N N 196 HIS CB HB3 sing N N 197 HIS CG ND1 sing Y N 198 HIS CG CD2 doub Y N 199 HIS ND1 CE1 doub Y N 200 HIS ND1 HD1 sing N N 201 HIS CD2 NE2 sing Y N 202 HIS CD2 HD2 sing N N 203 HIS CE1 NE2 sing Y N 204 HIS CE1 HE1 sing N N 205 HIS NE2 HE2 sing N N 206 HIS OXT HXT sing N N 207 HOH O H1 sing N N 208 HOH O H2 sing N N 209 ILE N CA sing N N 210 ILE N H sing N N 211 ILE N H2 sing N N 212 ILE CA C sing N N 213 ILE CA CB sing N N 214 ILE CA HA sing N N 215 ILE C O doub N N 216 ILE C OXT sing N N 217 ILE CB CG1 sing N N 218 ILE CB CG2 sing N N 219 ILE CB HB sing N N 220 ILE CG1 CD1 sing N N 221 ILE CG1 HG12 sing N N 222 ILE CG1 HG13 sing N N 223 ILE CG2 HG21 sing N N 224 ILE CG2 HG22 sing N N 225 ILE CG2 HG23 sing N N 226 ILE CD1 HD11 sing N N 227 ILE CD1 HD12 sing N N 228 ILE CD1 HD13 sing N N 229 ILE OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 MET N CA sing N N 276 MET N H sing N N 277 MET N H2 sing N N 278 MET CA C sing N N 279 MET CA CB sing N N 280 MET CA HA sing N N 281 MET C O doub N N 282 MET C OXT sing N N 283 MET CB CG sing N N 284 MET CB HB2 sing N N 285 MET CB HB3 sing N N 286 MET CG SD sing N N 287 MET CG HG2 sing N N 288 MET CG HG3 sing N N 289 MET SD CE sing N N 290 MET CE HE1 sing N N 291 MET CE HE2 sing N N 292 MET CE HE3 sing N N 293 MET OXT HXT sing N N 294 PHE N CA sing N N 295 PHE N H sing N N 296 PHE N H2 sing N N 297 PHE CA C sing N N 298 PHE CA CB sing N N 299 PHE CA HA sing N N 300 PHE C O doub N N 301 PHE C OXT sing N N 302 PHE CB CG sing N N 303 PHE CB HB2 sing N N 304 PHE CB HB3 sing N N 305 PHE CG CD1 doub Y N 306 PHE CG CD2 sing Y N 307 PHE CD1 CE1 sing Y N 308 PHE CD1 HD1 sing N N 309 PHE CD2 CE2 doub Y N 310 PHE CD2 HD2 sing N N 311 PHE CE1 CZ doub Y N 312 PHE CE1 HE1 sing N N 313 PHE CE2 CZ sing Y N 314 PHE CE2 HE2 sing N N 315 PHE CZ HZ sing N N 316 PHE OXT HXT sing N N 317 PRO N CA sing N N 318 PRO N CD sing N N 319 PRO N H sing N N 320 PRO CA C sing N N 321 PRO CA CB sing N N 322 PRO CA HA sing N N 323 PRO C O doub N N 324 PRO C OXT sing N N 325 PRO CB CG sing N N 326 PRO CB HB2 sing N N 327 PRO CB HB3 sing N N 328 PRO CG CD sing N N 329 PRO CG HG2 sing N N 330 PRO CG HG3 sing N N 331 PRO CD HD2 sing N N 332 PRO CD HD3 sing N N 333 PRO OXT HXT sing N N 334 SER N CA sing N N 335 SER N H sing N N 336 SER N H2 sing N N 337 SER CA C sing N N 338 SER CA CB sing N N 339 SER CA HA sing N N 340 SER C O doub N N 341 SER C OXT sing N N 342 SER CB OG sing N N 343 SER CB HB2 sing N N 344 SER CB HB3 sing N N 345 SER OG HG sing N N 346 SER OXT HXT sing N N 347 THR N CA sing N N 348 THR N H sing N N 349 THR N H2 sing N N 350 THR CA C sing N N 351 THR CA CB sing N N 352 THR CA HA sing N N 353 THR C O doub N N 354 THR C OXT sing N N 355 THR CB OG1 sing N N 356 THR CB CG2 sing N N 357 THR CB HB sing N N 358 THR OG1 HG1 sing N N 359 THR CG2 HG21 sing N N 360 THR CG2 HG22 sing N N 361 THR CG2 HG23 sing N N 362 THR OXT HXT sing N N 363 TRP N CA sing N N 364 TRP N H sing N N 365 TRP N H2 sing N N 366 TRP CA C sing N N 367 TRP CA CB sing N N 368 TRP CA HA sing N N 369 TRP C O doub N N 370 TRP C OXT sing N N 371 TRP CB CG sing N N 372 TRP CB HB2 sing N N 373 TRP CB HB3 sing N N 374 TRP CG CD1 doub Y N 375 TRP CG CD2 sing Y N 376 TRP CD1 NE1 sing Y N 377 TRP CD1 HD1 sing N N 378 TRP CD2 CE2 doub Y N 379 TRP CD2 CE3 sing Y N 380 TRP NE1 CE2 sing Y N 381 TRP NE1 HE1 sing N N 382 TRP CE2 CZ2 sing Y N 383 TRP CE3 CZ3 doub Y N 384 TRP CE3 HE3 sing N N 385 TRP CZ2 CH2 doub Y N 386 TRP CZ2 HZ2 sing N N 387 TRP CZ3 CH2 sing Y N 388 TRP CZ3 HZ3 sing N N 389 TRP CH2 HH2 sing N N 390 TRP OXT HXT sing N N 391 TYR N CA sing N N 392 TYR N H sing N N 393 TYR N H2 sing N N 394 TYR CA C sing N N 395 TYR CA CB sing N N 396 TYR CA HA sing N N 397 TYR C O doub N N 398 TYR C OXT sing N N 399 TYR CB CG sing N N 400 TYR CB HB2 sing N N 401 TYR CB HB3 sing N N 402 TYR CG CD1 doub Y N 403 TYR CG CD2 sing Y N 404 TYR CD1 CE1 sing Y N 405 TYR CD1 HD1 sing N N 406 TYR CD2 CE2 doub Y N 407 TYR CD2 HD2 sing N N 408 TYR CE1 CZ doub Y N 409 TYR CE1 HE1 sing N N 410 TYR CE2 CZ sing Y N 411 TYR CE2 HE2 sing N N 412 TYR CZ OH sing N N 413 TYR OH HH sing N N 414 TYR OXT HXT sing N N 415 VAL N CA sing N N 416 VAL N H sing N N 417 VAL N H2 sing N N 418 VAL CA C sing N N 419 VAL CA CB sing N N 420 VAL CA HA sing N N 421 VAL C O doub N N 422 VAL C OXT sing N N 423 VAL CB CG1 sing N N 424 VAL CB CG2 sing N N 425 VAL CB HB sing N N 426 VAL CG1 HG11 sing N N 427 VAL CG1 HG12 sing N N 428 VAL CG1 HG13 sing N N 429 VAL CG2 HG21 sing N N 430 VAL CG2 HG22 sing N N 431 VAL CG2 HG23 sing N N 432 VAL OXT HXT sing N N 433 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 DAUNOMYCIN DM1 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3F8B _pdbx_initial_refinement_model.details ? #