data_3FOV # _entry.id 3FOV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3FOV RCSB RCSB050857 WWPDB D_1000050857 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC7380 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3FOV _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-01-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Skarina, T.' 2 'Kagan, O.' 3 'Savchenko, A.' 4 'Edwards, A.M.' 5 'Joachimiak, A.' 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title 'X-ray crystal structure of protein RPA0323 of unknown function from Rhodopseudomonas palustris.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Osipiuk, J.' 1 primary 'Skarina, T.' 2 primary 'Kagan, O.' 3 primary 'Savchenko, A.' 4 primary 'Edwards, A.M.' 5 primary 'Joachimiak, A.' 6 # _cell.length_a 76.341 _cell.length_b 44.747 _cell.length_c 32.661 _cell.angle_alpha 90.000 _cell.angle_beta 108.620 _cell.angle_gamma 90.000 _cell.entry_id 3FOV _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3FOV _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UPF0102 protein RPA0323' 14714.326 1 ? ? ? ? 2 non-polymer syn 'NITRATE ION' 62.005 2 ? ? ? ? 3 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)AKTDRSQPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVAFVEVKARGNVDD AAYAVTPRQQSRIVAAAEAWLSRHPEHA(MSE)SELRFDAILIAPNTAPRHLPGAFDATPGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMAKTDRSQPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVAFVEVKARGNVDDAAYA VTPRQQSRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFDATPGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC7380 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 ALA n 1 5 LYS n 1 6 THR n 1 7 ASP n 1 8 ARG n 1 9 SER n 1 10 GLN n 1 11 PRO n 1 12 SER n 1 13 VAL n 1 14 LEU n 1 15 ALA n 1 16 ARG n 1 17 ILE n 1 18 ALA n 1 19 ALA n 1 20 PHE n 1 21 ARG n 1 22 THR n 1 23 GLY n 1 24 LEU n 1 25 SER n 1 26 ALA n 1 27 GLU n 1 28 ALA n 1 29 SER n 1 30 ALA n 1 31 ALA n 1 32 ASP n 1 33 TYR n 1 34 LEU n 1 35 GLU n 1 36 ARG n 1 37 GLN n 1 38 GLY n 1 39 TYR n 1 40 ARG n 1 41 ILE n 1 42 LEU n 1 43 ALA n 1 44 ARG n 1 45 ARG n 1 46 PHE n 1 47 LYS n 1 48 THR n 1 49 ARG n 1 50 CYS n 1 51 GLY n 1 52 GLU n 1 53 ILE n 1 54 ASP n 1 55 LEU n 1 56 VAL n 1 57 ALA n 1 58 GLN n 1 59 ARG n 1 60 ASP n 1 61 ALA n 1 62 LEU n 1 63 VAL n 1 64 ALA n 1 65 PHE n 1 66 VAL n 1 67 GLU n 1 68 VAL n 1 69 LYS n 1 70 ALA n 1 71 ARG n 1 72 GLY n 1 73 ASN n 1 74 VAL n 1 75 ASP n 1 76 ASP n 1 77 ALA n 1 78 ALA n 1 79 TYR n 1 80 ALA n 1 81 VAL n 1 82 THR n 1 83 PRO n 1 84 ARG n 1 85 GLN n 1 86 GLN n 1 87 SER n 1 88 ARG n 1 89 ILE n 1 90 VAL n 1 91 ALA n 1 92 ALA n 1 93 ALA n 1 94 GLU n 1 95 ALA n 1 96 TRP n 1 97 LEU n 1 98 SER n 1 99 ARG n 1 100 HIS n 1 101 PRO n 1 102 GLU n 1 103 HIS n 1 104 ALA n 1 105 MSE n 1 106 SER n 1 107 GLU n 1 108 LEU n 1 109 ARG n 1 110 PHE n 1 111 ASP n 1 112 ALA n 1 113 ILE n 1 114 LEU n 1 115 ILE n 1 116 ALA n 1 117 PRO n 1 118 ASN n 1 119 THR n 1 120 ALA n 1 121 PRO n 1 122 ARG n 1 123 HIS n 1 124 LEU n 1 125 PRO n 1 126 GLY n 1 127 ALA n 1 128 PHE n 1 129 ASP n 1 130 ALA n 1 131 THR n 1 132 PRO n 1 133 GLY n 1 134 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RPA0323 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CGA009 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rhodopseudomonas palustris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 258594 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-98 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET15b modified' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y323_RHOPA _struct_ref.pdbx_db_accession Q6NCZ4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAKTDRSQPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFKTRCGEIDLVAQRDALVAFVEVKARGNVDDAAYAVT PRQQSRIVAAAEAWLSRHPEHAMSELRFDAILIAPNTAPRHLPGAFDATP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FOV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 132 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6NCZ4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FOV GLY A 1 ? UNP Q6NCZ4 ? ? 'EXPRESSION TAG' -1 1 1 3FOV HIS A 2 ? UNP Q6NCZ4 ? ? 'EXPRESSION TAG' 0 2 1 3FOV GLY A 133 ? UNP Q6NCZ4 ? ? 'EXPRESSION TAG' 131 3 1 3FOV SER A 134 ? UNP Q6NCZ4 ? ? 'EXPRESSION TAG' 132 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3FOV _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 31.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.temp 294 _exptl_crystal_grow.pdbx_details '20% PEG 3350, 0.2 M Magnesium nitrate, 0.3 M NSDB-256, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 294K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-10-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM # _reflns.entry_id 3FOV _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 26.3 _reflns.number_obs 8519 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 40.099 _reflns.pdbx_chi_squared 1.211 _reflns.pdbx_redundancy 10.400 _reflns.percent_possible_obs 99.500 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 8519 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 36.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.94 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.445 _reflns_shell.meanI_over_sigI_obs 6.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.492 _reflns_shell.pdbx_redundancy 10.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 492 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3FOV _refine.ls_d_res_high 1.880 _refine.ls_d_res_low 26.270 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.430 _refine.ls_number_reflns_obs 8456 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details '1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_obs 0.190 _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.222 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 407 _refine.B_iso_mean 23.636 _refine.aniso_B[1][1] 0.100 _refine.aniso_B[2][2] 0.400 _refine.aniso_B[3][3] -0.670 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.280 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.pdbx_overall_ESU_R 0.166 _refine.pdbx_overall_ESU_R_Free 0.144 _refine.overall_SU_ML 0.117 _refine.overall_SU_B 8.988 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 55.54 _refine.B_iso_min 12.24 _refine.occupancy_max 1.00 _refine.occupancy_min 0.40 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 8456 _refine.ls_R_factor_all 0.190 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 798 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 894 _refine_hist.d_res_high 1.880 _refine_hist.d_res_low 26.270 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 849 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 592 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1156 1.488 1.955 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1424 0.914 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 109 6.518 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43 33.327 21.860 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 136 17.176 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 16.598 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 127 0.091 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 969 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 190 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 532 0.922 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 205 0.216 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 843 1.706 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 317 2.614 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 308 4.373 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.880 _refine_ls_shell.d_res_low 1.929 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.590 _refine_ls_shell.number_reflns_R_work 548 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.296 _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 577 _refine_ls_shell.number_reflns_obs 677 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FOV _struct.title 'Crystal structure of protein RPA0323 of unknown function from Rhodopseudomonas palustris' _struct.pdbx_descriptor 'UPF0102 protein RPA0323' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FOV _struct_keywords.text 'structural genomics, APC7380, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details 'AUTHORS STATE THAT THE ASSEMBLY OF THE BIOLOGICAL UNIT THAT IS SHOWN IN REMARK 350 IS PUTATIVE AT THE TIME OF DEPOSITION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 25 ? GLN A 37 ? SER A 23 GLN A 35 1 ? 13 HELX_P HELX_P2 2 THR A 82 ? HIS A 100 ? THR A 80 HIS A 98 1 ? 19 HELX_P HELX_P3 3 PRO A 101 ? ALA A 104 ? PRO A 99 ALA A 102 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 50 SG ? ? A CYS 48 A CYS 48 2_555 ? ? ? ? ? ? ? 2.096 ? covale1 covale ? ? A ALA 104 C ? ? ? 1_555 A MSE 105 N ? ? A ALA 102 A MSE 103 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? A MSE 105 C ? ? ? 1_555 A SER 106 N ? ? A MSE 103 A SER 104 1_555 ? ? ? ? ? ? ? 1.331 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 40 ? THR A 48 ? ARG A 38 THR A 46 A 2 GLY A 51 ? ARG A 59 ? GLY A 49 ARG A 57 A 3 LEU A 62 ? ALA A 70 ? LEU A 60 ALA A 68 A 4 GLU A 107 ? ILE A 115 ? GLU A 105 ILE A 113 A 5 ARG A 122 ? PHE A 128 ? ARG A 120 PHE A 126 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 42 ? N LEU A 40 O VAL A 56 ? O VAL A 54 A 2 3 N ALA A 57 ? N ALA A 55 O ALA A 64 ? O ALA A 62 A 3 4 N VAL A 63 ? N VAL A 61 O GLU A 107 ? O GLU A 105 A 4 5 N ALA A 112 ? N ALA A 110 O LEU A 124 ? O LEU A 122 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE NO3 A 201' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NO3 A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TYR A 33 ? TYR A 31 . ? 4_546 ? 2 AC1 7 PHE A 46 ? PHE A 44 . ? 1_555 ? 3 AC1 7 ARG A 99 ? ARG A 97 . ? 1_555 ? 4 AC1 7 HIS A 100 ? HIS A 98 . ? 1_555 ? 5 AC1 7 ALA A 120 ? ALA A 118 . ? 4_546 ? 6 AC1 7 HOH D . ? HOH A 139 . ? 4_546 ? 7 AC1 7 HOH D . ? HOH A 186 . ? 1_555 ? 8 AC2 2 ARG A 36 ? ARG A 34 . ? 1_555 ? 9 AC2 2 ARG A 99 ? ARG A 97 . ? 4_556 ? # _atom_sites.entry_id 3FOV _atom_sites.fract_transf_matrix[1][1] 0.013099 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004414 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022348 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032309 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MSE 3 1 ? ? ? A . n A 1 4 ALA 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 THR 6 4 ? ? ? A . n A 1 7 ASP 7 5 ? ? ? A . n A 1 8 ARG 8 6 ? ? ? A . n A 1 9 SER 9 7 ? ? ? A . n A 1 10 GLN 10 8 ? ? ? A . n A 1 11 PRO 11 9 ? ? ? A . n A 1 12 SER 12 10 ? ? ? A . n A 1 13 VAL 13 11 ? ? ? A . n A 1 14 LEU 14 12 ? ? ? A . n A 1 15 ALA 15 13 ? ? ? A . n A 1 16 ARG 16 14 ? ? ? A . n A 1 17 ILE 17 15 ? ? ? A . n A 1 18 ALA 18 16 ? ? ? A . n A 1 19 ALA 19 17 ? ? ? A . n A 1 20 PHE 20 18 ? ? ? A . n A 1 21 ARG 21 19 ? ? ? A . n A 1 22 THR 22 20 ? ? ? A . n A 1 23 GLY 23 21 ? ? ? A . n A 1 24 LEU 24 22 ? ? ? A . n A 1 25 SER 25 23 23 SER SER A . n A 1 26 ALA 26 24 24 ALA ALA A . n A 1 27 GLU 27 25 25 GLU GLU A . n A 1 28 ALA 28 26 26 ALA ALA A . n A 1 29 SER 29 27 27 SER SER A . n A 1 30 ALA 30 28 28 ALA ALA A . n A 1 31 ALA 31 29 29 ALA ALA A . n A 1 32 ASP 32 30 30 ASP ASP A . n A 1 33 TYR 33 31 31 TYR TYR A . n A 1 34 LEU 34 32 32 LEU LEU A . n A 1 35 GLU 35 33 33 GLU GLU A . n A 1 36 ARG 36 34 34 ARG ARG A . n A 1 37 GLN 37 35 35 GLN GLN A . n A 1 38 GLY 38 36 36 GLY GLY A . n A 1 39 TYR 39 37 37 TYR TYR A . n A 1 40 ARG 40 38 38 ARG ARG A . n A 1 41 ILE 41 39 39 ILE ILE A . n A 1 42 LEU 42 40 40 LEU LEU A . n A 1 43 ALA 43 41 41 ALA ALA A . n A 1 44 ARG 44 42 42 ARG ARG A . n A 1 45 ARG 45 43 43 ARG ARG A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 LYS 47 45 45 LYS LYS A . n A 1 48 THR 48 46 46 THR THR A . n A 1 49 ARG 49 47 47 ARG ARG A . n A 1 50 CYS 50 48 48 CYS CYS A . n A 1 51 GLY 51 49 49 GLY GLY A . n A 1 52 GLU 52 50 50 GLU GLU A . n A 1 53 ILE 53 51 51 ILE ILE A . n A 1 54 ASP 54 52 52 ASP ASP A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 VAL 56 54 54 VAL VAL A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 GLN 58 56 56 GLN GLN A . n A 1 59 ARG 59 57 57 ARG ARG A . n A 1 60 ASP 60 58 58 ASP ASP A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 LEU 62 60 60 LEU LEU A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 ALA 64 62 62 ALA ALA A . n A 1 65 PHE 65 63 63 PHE PHE A . n A 1 66 VAL 66 64 64 VAL VAL A . n A 1 67 GLU 67 65 65 GLU GLU A . n A 1 68 VAL 68 66 66 VAL VAL A . n A 1 69 LYS 69 67 67 LYS LYS A . n A 1 70 ALA 70 68 68 ALA ALA A . n A 1 71 ARG 71 69 69 ARG ARG A . n A 1 72 GLY 72 70 ? ? ? A . n A 1 73 ASN 73 71 ? ? ? A . n A 1 74 VAL 74 72 ? ? ? A . n A 1 75 ASP 75 73 ? ? ? A . n A 1 76 ASP 76 74 ? ? ? A . n A 1 77 ALA 77 75 ? ? ? A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 TYR 79 77 77 TYR TYR A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 THR 82 80 80 THR THR A . n A 1 83 PRO 83 81 81 PRO PRO A . n A 1 84 ARG 84 82 82 ARG ARG A . n A 1 85 GLN 85 83 83 GLN GLN A . n A 1 86 GLN 86 84 84 GLN GLN A . n A 1 87 SER 87 85 85 SER SER A . n A 1 88 ARG 88 86 86 ARG ARG A . n A 1 89 ILE 89 87 87 ILE ILE A . n A 1 90 VAL 90 88 88 VAL VAL A . n A 1 91 ALA 91 89 89 ALA ALA A . n A 1 92 ALA 92 90 90 ALA ALA A . n A 1 93 ALA 93 91 91 ALA ALA A . n A 1 94 GLU 94 92 92 GLU GLU A . n A 1 95 ALA 95 93 93 ALA ALA A . n A 1 96 TRP 96 94 94 TRP TRP A . n A 1 97 LEU 97 95 95 LEU LEU A . n A 1 98 SER 98 96 96 SER SER A . n A 1 99 ARG 99 97 97 ARG ARG A . n A 1 100 HIS 100 98 98 HIS HIS A . n A 1 101 PRO 101 99 99 PRO PRO A . n A 1 102 GLU 102 100 100 GLU GLU A . n A 1 103 HIS 103 101 101 HIS HIS A . n A 1 104 ALA 104 102 102 ALA ALA A . n A 1 105 MSE 105 103 103 MSE MSE A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 GLU 107 105 105 GLU GLU A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 ARG 109 107 107 ARG ARG A . n A 1 110 PHE 110 108 108 PHE PHE A . n A 1 111 ASP 111 109 109 ASP ASP A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ILE 113 111 111 ILE ILE A . n A 1 114 LEU 114 112 112 LEU LEU A . n A 1 115 ILE 115 113 113 ILE ILE A . n A 1 116 ALA 116 114 114 ALA ALA A . n A 1 117 PRO 117 115 115 PRO PRO A . n A 1 118 ASN 118 116 116 ASN ASN A . n A 1 119 THR 119 117 117 THR THR A . n A 1 120 ALA 120 118 118 ALA ALA A . n A 1 121 PRO 121 119 119 PRO PRO A . n A 1 122 ARG 122 120 120 ARG ARG A . n A 1 123 HIS 123 121 121 HIS HIS A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 PRO 125 123 123 PRO PRO A . n A 1 126 GLY 126 124 124 GLY GLY A . n A 1 127 ALA 127 125 125 ALA ALA A . n A 1 128 PHE 128 126 126 PHE PHE A . n A 1 129 ASP 129 127 127 ASP ASP A . n A 1 130 ALA 130 128 128 ALA ALA A . n A 1 131 THR 131 129 129 THR THR A . n A 1 132 PRO 132 130 130 PRO PRO A . n A 1 133 GLY 133 131 ? ? ? A . n A 1 134 SER 134 132 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 1 201 201 NO3 NO3 A . C 2 NO3 1 202 202 NO3 NO3 A . D 3 HOH 1 133 1 HOH HOH A . D 3 HOH 2 134 2 HOH HOH A . D 3 HOH 3 135 3 HOH HOH A . D 3 HOH 4 136 4 HOH HOH A . D 3 HOH 5 137 5 HOH HOH A . D 3 HOH 6 138 6 HOH HOH A . D 3 HOH 7 139 7 HOH HOH A . D 3 HOH 8 140 8 HOH HOH A . D 3 HOH 9 141 9 HOH HOH A . D 3 HOH 10 142 10 HOH HOH A . D 3 HOH 11 143 11 HOH HOH A . D 3 HOH 12 144 12 HOH HOH A . D 3 HOH 13 145 13 HOH HOH A . D 3 HOH 14 146 14 HOH HOH A . D 3 HOH 15 147 15 HOH HOH A . D 3 HOH 16 148 16 HOH HOH A . D 3 HOH 17 149 17 HOH HOH A . D 3 HOH 18 150 18 HOH HOH A . D 3 HOH 19 151 19 HOH HOH A . D 3 HOH 20 152 20 HOH HOH A . D 3 HOH 21 153 21 HOH HOH A . D 3 HOH 22 154 22 HOH HOH A . D 3 HOH 23 155 23 HOH HOH A . D 3 HOH 24 156 24 HOH HOH A . D 3 HOH 25 157 25 HOH HOH A . D 3 HOH 26 158 26 HOH HOH A . D 3 HOH 27 159 27 HOH HOH A . D 3 HOH 28 160 28 HOH HOH A . D 3 HOH 29 161 29 HOH HOH A . D 3 HOH 30 162 30 HOH HOH A . D 3 HOH 31 163 31 HOH HOH A . D 3 HOH 32 164 32 HOH HOH A . D 3 HOH 33 165 33 HOH HOH A . D 3 HOH 34 166 34 HOH HOH A . D 3 HOH 35 167 35 HOH HOH A . D 3 HOH 36 168 36 HOH HOH A . D 3 HOH 37 169 37 HOH HOH A . D 3 HOH 38 170 39 HOH HOH A . D 3 HOH 39 171 40 HOH HOH A . D 3 HOH 40 172 41 HOH HOH A . D 3 HOH 41 173 42 HOH HOH A . D 3 HOH 42 174 43 HOH HOH A . D 3 HOH 43 175 44 HOH HOH A . D 3 HOH 44 176 45 HOH HOH A . D 3 HOH 45 177 46 HOH HOH A . D 3 HOH 46 178 47 HOH HOH A . D 3 HOH 47 179 48 HOH HOH A . D 3 HOH 48 180 49 HOH HOH A . D 3 HOH 49 181 50 HOH HOH A . D 3 HOH 50 182 51 HOH HOH A . D 3 HOH 51 183 52 HOH HOH A . D 3 HOH 52 184 53 HOH HOH A . D 3 HOH 53 185 54 HOH HOH A . D 3 HOH 54 186 55 HOH HOH A . D 3 HOH 55 187 56 HOH HOH A . D 3 HOH 56 188 57 HOH HOH A . D 3 HOH 57 189 58 HOH HOH A . D 3 HOH 58 190 59 HOH HOH A . D 3 HOH 59 191 60 HOH HOH A . D 3 HOH 60 192 61 HOH HOH A . D 3 HOH 61 193 62 HOH HOH A . D 3 HOH 62 194 63 HOH HOH A . D 3 HOH 63 195 64 HOH HOH A . D 3 HOH 64 196 65 HOH HOH A . D 3 HOH 65 197 66 HOH HOH A . D 3 HOH 66 198 67 HOH HOH A . D 3 HOH 67 199 68 HOH HOH A . D 3 HOH 68 200 69 HOH HOH A . D 3 HOH 69 203 70 HOH HOH A . D 3 HOH 70 204 71 HOH HOH A . D 3 HOH 71 205 72 HOH HOH A . D 3 HOH 72 206 73 HOH HOH A . D 3 HOH 73 207 74 HOH HOH A . D 3 HOH 74 208 75 HOH HOH A . D 3 HOH 75 209 76 HOH HOH A . D 3 HOH 76 210 77 HOH HOH A . D 3 HOH 77 211 78 HOH HOH A . D 3 HOH 78 212 79 HOH HOH A . D 3 HOH 79 213 80 HOH HOH A . D 3 HOH 80 214 81 HOH HOH A . D 3 HOH 81 215 82 HOH HOH A . D 3 HOH 82 216 83 HOH HOH A . D 3 HOH 83 217 84 HOH HOH A . D 3 HOH 84 218 85 HOH HOH A . D 3 HOH 85 219 86 HOH HOH A . D 3 HOH 86 220 87 HOH HOH A . D 3 HOH 87 221 88 HOH HOH A . D 3 HOH 88 222 89 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 105 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 103 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D 2 1,3 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 970 ? 1 MORE -7.4 ? 1 'SSA (A^2)' 11250 ? 2 'ABSA (A^2)' 1280 ? 2 MORE -15.4 ? 2 'SSA (A^2)' 10950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -10.4283347218 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.9514257495 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 17.2783 14.4717 16.7631 0.0264 0.0331 0.0661 0.0094 -0.0369 -0.0100 2.1158 4.1716 2.6357 1.9979 1.5098 0.8904 0.0578 0.0297 -0.0874 -0.0378 -0.2243 -0.3080 0.0543 0.0108 0.1364 'X-RAY DIFFRACTION' 2 ? refined 5.9446 5.3640 4.9739 0.0359 0.0208 0.0562 -0.0165 -0.0006 0.0045 7.5267 3.2113 0.7408 -2.1827 1.6777 -1.4589 0.0243 0.0371 -0.0614 -0.0049 -0.3347 0.0263 -0.0055 0.0052 -0.0185 'X-RAY DIFFRACTION' 3 ? refined 11.2088 17.9829 12.5569 0.0595 0.0198 0.0297 0.0039 -0.0157 0.0049 6.8171 4.7403 3.5986 0.0750 -0.1749 1.5093 -0.0838 0.1556 -0.0717 0.2534 0.1890 -0.1807 -0.0916 -0.3472 -0.0735 'X-RAY DIFFRACTION' 4 ? refined 9.7560 22.7656 -0.6856 0.2203 0.1536 0.2236 -0.0144 -0.0215 0.0088 4.4071 9.9412 0.2131 6.4330 0.9649 1.4346 -0.1156 0.0903 0.0254 0.0928 0.2456 0.0821 0.0642 -0.0216 0.0213 'X-RAY DIFFRACTION' 5 ? refined 3.2849 11.7617 4.8241 0.0430 0.0347 0.0697 -0.0065 -0.0054 0.0039 1.9104 0.6997 6.5364 -1.0649 0.3747 -1.0335 -0.0463 -0.0700 0.1163 0.1457 -0.1902 0.0794 0.0580 -0.2848 -0.1263 'X-RAY DIFFRACTION' 6 ? refined 7.4945 16.4464 13.6814 0.0445 0.0548 0.0165 0.0143 -0.0067 -0.0196 2.9170 3.1996 2.4389 1.6230 0.1722 -0.4093 -0.0227 0.0681 -0.0454 -0.2543 0.1547 0.0925 0.0851 -0.2081 0.0604 'X-RAY DIFFRACTION' 7 ? refined 9.5421 24.1511 9.2383 0.0981 0.0532 0.0634 0.0079 -0.0169 0.0203 9.5483 2.2009 4.5211 0.6034 -1.3246 0.1455 -0.3098 0.2187 0.0912 0.0623 0.4610 0.3133 -0.0046 -0.2163 -0.3406 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A A 43 ? 23 . . . . 'X-RAY DIFFRACTION' ? 2 2 A A 51 ? 44 . . . . 'X-RAY DIFFRACTION' ? 3 3 A A 69 ? 52 . . . . 'X-RAY DIFFRACTION' ? 4 4 A A 81 ? 76 . . . . 'X-RAY DIFFRACTION' ? 5 5 A A 95 ? 82 . . . . 'X-RAY DIFFRACTION' ? 6 6 A A 117 ? 96 . . . . 'X-RAY DIFFRACTION' ? 7 7 A A 130 ? 118 . . . . 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC 5.5.0054 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 MLPHARE . ? ? ? ? phasing ? ? ? 8 DM . ? ? ? ? phasing ? ? ? 9 SOLVE . ? ? ? ? phasing ? ? ? 10 RESOLVE . ? ? ? ? phasing ? ? ? 11 HKL-3000 . ? ? ? ? phasing ? ? ? 12 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 210 ? ? O A HOH 212 ? ? 2.02 2 1 OE2 A GLU 65 ? A O A HOH 163 ? ? 2.05 3 1 O A HOH 208 ? ? O A HOH 209 ? ? 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 212 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 213 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 58 ? ? 68.43 -133.70 2 1 TYR A 77 ? ? -172.16 136.51 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MSE 1 ? A MSE 3 4 1 Y 1 A ALA 2 ? A ALA 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A THR 4 ? A THR 6 7 1 Y 1 A ASP 5 ? A ASP 7 8 1 Y 1 A ARG 6 ? A ARG 8 9 1 Y 1 A SER 7 ? A SER 9 10 1 Y 1 A GLN 8 ? A GLN 10 11 1 Y 1 A PRO 9 ? A PRO 11 12 1 Y 1 A SER 10 ? A SER 12 13 1 Y 1 A VAL 11 ? A VAL 13 14 1 Y 1 A LEU 12 ? A LEU 14 15 1 Y 1 A ALA 13 ? A ALA 15 16 1 Y 1 A ARG 14 ? A ARG 16 17 1 Y 1 A ILE 15 ? A ILE 17 18 1 Y 1 A ALA 16 ? A ALA 18 19 1 Y 1 A ALA 17 ? A ALA 19 20 1 Y 1 A PHE 18 ? A PHE 20 21 1 Y 1 A ARG 19 ? A ARG 21 22 1 Y 1 A THR 20 ? A THR 22 23 1 Y 1 A GLY 21 ? A GLY 23 24 1 Y 1 A LEU 22 ? A LEU 24 25 1 Y 1 A GLY 70 ? A GLY 72 26 1 Y 1 A ASN 71 ? A ASN 73 27 1 Y 1 A VAL 72 ? A VAL 74 28 1 Y 1 A ASP 73 ? A ASP 75 29 1 Y 1 A ASP 74 ? A ASP 76 30 1 Y 1 A ALA 75 ? A ALA 77 31 1 Y 1 A GLY 131 ? A GLY 133 32 1 Y 1 A SER 132 ? A SER 134 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 water HOH #