data_3G0K # _entry.id 3G0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G0K pdb_00003g0k 10.2210/pdb3g0k/pdb RCSB RCSB051270 ? ? WWPDB D_1000051270 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 391045 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3G0K _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-01-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of protein of unknown function with a cystatin-like fold (YP_498150.1) from Novosphingobium aromaticivorans DSM 12444 at 1.30 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3G0K _cell.length_a 54.343 _cell.length_b 54.343 _cell.length_c 93.947 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G0K _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative membrane protein' 16988.010 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 4 ? ? ? ? 5 water nat water 18.015 181 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)ARTAEEQANHDLVIE(MSE)YNKVLIA(MSE)DSSAVDRYIAPGYVQHSSLA EPSVEALKGFLDRVRAESPDARQTIHRSFVDGDHVITHTHVERWPGDAGLAVVDIFRVEGG(MSE)IVEHWDVIQDVPAN PVNPNS(MSE)F ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMARTAEEQANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSLAEPSVEALKGFLDRVRA ESPDARQTIHRSFVDGDHVITHTHVERWPGDAGLAVVDIFRVEGGMIVEHWDVIQDVPANPVNPNSMF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 391045 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 ALA n 1 22 ARG n 1 23 THR n 1 24 ALA n 1 25 GLU n 1 26 GLU n 1 27 GLN n 1 28 ALA n 1 29 ASN n 1 30 HIS n 1 31 ASP n 1 32 LEU n 1 33 VAL n 1 34 ILE n 1 35 GLU n 1 36 MSE n 1 37 TYR n 1 38 ASN n 1 39 LYS n 1 40 VAL n 1 41 LEU n 1 42 ILE n 1 43 ALA n 1 44 MSE n 1 45 ASP n 1 46 SER n 1 47 SER n 1 48 ALA n 1 49 VAL n 1 50 ASP n 1 51 ARG n 1 52 TYR n 1 53 ILE n 1 54 ALA n 1 55 PRO n 1 56 GLY n 1 57 TYR n 1 58 VAL n 1 59 GLN n 1 60 HIS n 1 61 SER n 1 62 SER n 1 63 LEU n 1 64 ALA n 1 65 GLU n 1 66 PRO n 1 67 SER n 1 68 VAL n 1 69 GLU n 1 70 ALA n 1 71 LEU n 1 72 LYS n 1 73 GLY n 1 74 PHE n 1 75 LEU n 1 76 ASP n 1 77 ARG n 1 78 VAL n 1 79 ARG n 1 80 ALA n 1 81 GLU n 1 82 SER n 1 83 PRO n 1 84 ASP n 1 85 ALA n 1 86 ARG n 1 87 GLN n 1 88 THR n 1 89 ILE n 1 90 HIS n 1 91 ARG n 1 92 SER n 1 93 PHE n 1 94 VAL n 1 95 ASP n 1 96 GLY n 1 97 ASP n 1 98 HIS n 1 99 VAL n 1 100 ILE n 1 101 THR n 1 102 HIS n 1 103 THR n 1 104 HIS n 1 105 VAL n 1 106 GLU n 1 107 ARG n 1 108 TRP n 1 109 PRO n 1 110 GLY n 1 111 ASP n 1 112 ALA n 1 113 GLY n 1 114 LEU n 1 115 ALA n 1 116 VAL n 1 117 VAL n 1 118 ASP n 1 119 ILE n 1 120 PHE n 1 121 ARG n 1 122 VAL n 1 123 GLU n 1 124 GLY n 1 125 GLY n 1 126 MSE n 1 127 ILE n 1 128 VAL n 1 129 GLU n 1 130 HIS n 1 131 TRP n 1 132 ASP n 1 133 VAL n 1 134 ILE n 1 135 GLN n 1 136 ASP n 1 137 VAL n 1 138 PRO n 1 139 ALA n 1 140 ASN n 1 141 PRO n 1 142 VAL n 1 143 ASN n 1 144 PRO n 1 145 ASN n 1 146 SER n 1 147 MSE n 1 148 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Saro_2880, YP_498150.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 12444' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Novosphingobium aromaticivorans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 279238 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2G4A7_NOVAD _struct_ref.pdbx_db_accession Q2G4A7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MARTAEEQANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSLAEPSVEALKGFLDRVRAESPDARQTIHRSFVDGDHV ITHTHVERWPGDAGLAVVDIFRVEGGMIVEHWDVIQDVPANPVNPNSMF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3G0K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2G4A7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3G0K MSE A 1 ? UNP Q2G4A7 ? ? 'expression tag' -18 1 1 3G0K GLY A 2 ? UNP Q2G4A7 ? ? 'expression tag' -17 2 1 3G0K SER A 3 ? UNP Q2G4A7 ? ? 'expression tag' -16 3 1 3G0K ASP A 4 ? UNP Q2G4A7 ? ? 'expression tag' -15 4 1 3G0K LYS A 5 ? UNP Q2G4A7 ? ? 'expression tag' -14 5 1 3G0K ILE A 6 ? UNP Q2G4A7 ? ? 'expression tag' -13 6 1 3G0K HIS A 7 ? UNP Q2G4A7 ? ? 'expression tag' -12 7 1 3G0K HIS A 8 ? UNP Q2G4A7 ? ? 'expression tag' -11 8 1 3G0K HIS A 9 ? UNP Q2G4A7 ? ? 'expression tag' -10 9 1 3G0K HIS A 10 ? UNP Q2G4A7 ? ? 'expression tag' -9 10 1 3G0K HIS A 11 ? UNP Q2G4A7 ? ? 'expression tag' -8 11 1 3G0K HIS A 12 ? UNP Q2G4A7 ? ? 'expression tag' -7 12 1 3G0K GLU A 13 ? UNP Q2G4A7 ? ? 'expression tag' -6 13 1 3G0K ASN A 14 ? UNP Q2G4A7 ? ? 'expression tag' -5 14 1 3G0K LEU A 15 ? UNP Q2G4A7 ? ? 'expression tag' -4 15 1 3G0K TYR A 16 ? UNP Q2G4A7 ? ? 'expression tag' -3 16 1 3G0K PHE A 17 ? UNP Q2G4A7 ? ? 'expression tag' -2 17 1 3G0K GLN A 18 ? UNP Q2G4A7 ? ? 'expression tag' -1 18 1 3G0K GLY A 19 ? UNP Q2G4A7 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3G0K # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.020M CaCl2, 30.0% MPD, 0.1M Acetate pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-11-15 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97821 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97821 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3G0K _reflns.d_resolution_high 1.30 _reflns.d_resolution_low 26.100 _reflns.number_obs 39549 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_netI_over_sigmaI 6.150 _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 98.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.30 1.33 ? 9498 ? 0.442 1.8 0.442 ? 4.00 ? 2374 81.90 1 1 1.33 1.37 ? 12441 ? 0.369 2.0 0.369 ? 4.60 ? 2701 94.70 2 1 1.37 1.41 ? 14894 ? 0.328 2.3 0.328 ? 5.40 ? 2781 100.00 3 1 1.41 1.45 ? 14425 ? 0.280 2.6 0.280 ? 5.40 ? 2695 100.00 4 1 1.45 1.50 ? 14080 ? 0.239 3.1 0.239 ? 5.40 ? 2627 100.00 5 1 1.50 1.55 ? 13781 ? 0.193 3.7 0.193 ? 5.40 ? 2557 100.00 6 1 1.55 1.61 ? 13126 ? 0.168 4.2 0.168 ? 5.40 ? 2438 100.00 7 1 1.61 1.68 ? 12798 ? 0.151 4.6 0.151 ? 5.40 ? 2378 100.00 8 1 1.68 1.75 ? 12533 ? 0.125 5.3 0.125 ? 5.40 ? 2324 100.00 9 1 1.75 1.84 ? 11510 ? 0.104 6.2 0.104 ? 5.40 ? 2126 100.00 10 1 1.84 1.94 ? 11415 ? 0.092 7.0 0.092 ? 5.40 ? 2099 100.00 11 1 1.94 2.06 ? 11448 ? 0.083 7.6 0.083 ? 5.80 ? 1966 100.00 12 1 2.06 2.20 ? 12085 ? 0.078 7.7 0.078 ? 6.60 ? 1844 100.00 13 1 2.20 2.37 ? 13049 ? 0.077 7.9 0.077 ? 7.50 ? 1748 100.00 14 1 2.37 2.60 ? 14939 ? 0.070 8.7 0.070 ? 9.30 ? 1611 100.00 15 1 2.60 2.91 ? 15443 ? 0.065 9.4 0.065 ? 10.70 ? 1445 100.00 16 1 2.91 3.36 ? 13976 ? 0.057 10.9 0.057 ? 10.60 ? 1316 100.00 17 1 3.36 4.11 ? 11647 ? 0.051 11.7 0.051 ? 10.50 ? 1114 100.00 18 1 4.11 5.81 ? 8777 ? 0.052 11.7 0.052 ? 10.00 ? 881 100.00 19 1 5.81 26.10 ? 4588 ? 0.062 10.0 0.062 ? 8.80 ? 524 97.50 20 1 # _refine.entry_id 3G0K _refine.ls_d_res_high 1.300 _refine.ls_d_res_low 26.100 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.250 _refine.ls_number_reflns_obs 39502 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. U VALUES: REFINED INDIVIDUALLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. A CALCIUM ION (CA) FROM THE CRYSTALLIZATION SOLUTIONS HAS BEEN MODELED INTO THE STRUCTURE BASED ON ANOMALOUS DIFFERENCE FOURIERS AND COORDINATION GEOMETRY. 5. ACETATE (ACT) AND (4S)-2-METHYL-2,4-PENTANEDIOL (MPD) FROM THE CRYSTALLIZATION SOLUTIONS HAVE BEEN MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.121 _refine.ls_R_factor_R_work 0.120 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.143 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1969 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.837 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.070 _refine.aniso_B[2][2] 0.070 _refine.aniso_B[3][3] -0.110 _refine.aniso_B[1][2] 0.040 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.980 _refine.correlation_coeff_Fo_to_Fc_free 0.976 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.036 _refine.pdbx_overall_ESU_R_Free 0.035 _refine.overall_SU_ML 0.019 _refine.overall_SU_B 1.008 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 61.33 _refine.B_iso_min 4.55 _refine.occupancy_max 1.00 _refine.occupancy_min 0.10 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1009 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 1231 _refine_hist.d_res_high 1.300 _refine_hist.d_res_low 26.100 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1149 0.018 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 741 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 1589 1.807 1.965 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 1824 0.999 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 155 6.688 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 59 35.566 24.576 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 182 11.132 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 8 6.511 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 178 0.112 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1307 0.010 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 223 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 693 3.081 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 271 2.508 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1136 4.112 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 456 4.845 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 439 6.571 11.000 ? ? r_rigid_bond_restr 'X-RAY DIFFRACTION' 1890 2.373 3.000 ? ? r_sphericity_free 'X-RAY DIFFRACTION' 184 13.334 3.000 ? ? r_sphericity_bonded 'X-RAY DIFFRACTION' 1858 6.458 3.000 ? ? # _refine_ls_shell.d_res_high 1.300 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 81.770 _refine_ls_shell.number_reflns_R_work 2289 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.R_factor_R_free 0.295 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2390 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3G0K _struct.title ;Crystal structure of a protein of unknown function with a cystatin-like fold (saro_2880) from novosphingobium aromaticivorans dsm at 1.30 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Snoal-like polyketide cyclase, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, ca-binding protein ; _struct_keywords.pdbx_keywords 'Ca-BINDING PROTEIN' _struct_keywords.entry_id 3G0K # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details 'STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 23 ? VAL A 40 ? THR A 4 VAL A 21 1 ? 18 HELX_P HELX_P2 2 ASP A 45 ? ARG A 51 ? ASP A 26 ARG A 32 5 ? 7 HELX_P HELX_P3 3 SER A 67 ? SER A 82 ? SER A 48 SER A 63 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 20 C ? ? ? 1_555 A ALA 21 N ? ? A MSE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale2 covale both ? A GLU 35 C ? ? ? 1_555 A MSE 36 N ? ? A GLU 16 A MSE 17 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale3 covale both ? A MSE 36 C ? ? ? 1_555 A TYR 37 N ? ? A MSE 17 A TYR 18 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale4 covale both ? A ALA 43 C ? ? ? 1_555 A MSE 44 N ? ? A ALA 24 A MSE 25 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A MSE 44 C ? ? ? 1_555 A ASP 45 N ? ? A MSE 25 A ASP 26 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? A GLY 125 C ? ? ? 1_555 A MSE 126 N ? ? A GLY 106 A MSE 107 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A MSE 126 C ? ? ? 1_555 A ILE 127 N ? ? A MSE 107 A ILE 108 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale8 covale both ? A SER 146 C ? ? ? 1_555 A MSE 147 N ? ? A SER 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.307 ? ? covale9 covale both ? A MSE 147 C ? ? ? 1_555 A PHE 148 N ? ? A MSE 128 A PHE 129 1_555 ? ? ? ? ? ? ? 1.342 ? ? metalc1 metalc ? ? A ALA 21 O ? ? ? 1_555 B CA . CA ? ? A ALA 2 A CA 130 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc2 metalc ? ? A GLU 26 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 7 A CA 130 1_555 ? ? ? ? ? ? ? 2.624 ? ? metalc3 metalc ? ? A GLU 26 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 7 A CA 130 1_555 ? ? ? ? ? ? ? 2.667 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 130 A HOH 204 1_555 ? ? ? ? ? ? ? 2.414 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 53 ? GLN A 59 ? ILE A 34 GLN A 40 A 2 MSE A 126 ? ASP A 136 ? MSE A 107 ASP A 117 A 3 LEU A 114 ? GLU A 123 ? LEU A 95 GLU A 104 A 4 HIS A 98 ? GLU A 106 ? HIS A 79 GLU A 87 A 5 ARG A 86 ? ASP A 95 ? ARG A 67 ASP A 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 54 ? N ALA A 35 O ILE A 127 ? O ILE A 108 A 2 3 O GLN A 135 ? O GLN A 116 N ALA A 115 ? N ALA A 96 A 3 4 O PHE A 120 ? O PHE A 101 N VAL A 99 ? N VAL A 80 A 4 5 O GLU A 106 ? O GLU A 87 N ARG A 86 ? N ARG A 67 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 130 ? 3 'BINDING SITE FOR RESIDUE CA A 130' AC2 Software A ACT 131 ? 3 'BINDING SITE FOR RESIDUE ACT A 131' AC3 Software A ACT 132 ? 5 'BINDING SITE FOR RESIDUE ACT A 132' AC4 Software A MPD 133 ? 7 'BINDING SITE FOR RESIDUE MPD A 133' AC5 Software A MPD 134 ? 6 'BINDING SITE FOR RESIDUE MPD A 134' AC6 Software A MPD 135 ? 2 'BINDING SITE FOR RESIDUE MPD A 135' AC7 Software A MPD 136 ? 4 'BINDING SITE FOR RESIDUE MPD A 136' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ALA A 21 ? ALA A 2 . ? 1_555 ? 2 AC1 3 GLU A 26 ? GLU A 7 . ? 1_555 ? 3 AC1 3 HOH I . ? HOH A 204 . ? 4_555 ? 4 AC2 3 ASP A 84 ? ASP A 65 . ? 1_555 ? 5 AC2 3 GLU A 106 ? GLU A 87 . ? 1_555 ? 6 AC2 3 HOH I . ? HOH A 157 . ? 1_555 ? 7 AC3 5 ASP A 45 ? ASP A 26 . ? 2_664 ? 8 AC3 5 ARG A 79 ? ARG A 60 . ? 2_664 ? 9 AC3 5 HOH I . ? HOH A 187 . ? 1_555 ? 10 AC3 5 HOH I . ? HOH A 188 . ? 1_555 ? 11 AC3 5 HOH I . ? HOH A 276 . ? 2_664 ? 12 AC4 7 LEU A 41 ? LEU A 22 . ? 1_555 ? 13 AC4 7 GLN A 59 ? GLN A 40 . ? 1_555 ? 14 AC4 7 ALA A 64 ? ALA A 45 . ? 1_555 ? 15 AC4 7 ASP A 118 ? ASP A 99 . ? 1_555 ? 16 AC4 7 HIS A 130 ? HIS A 111 . ? 1_555 ? 17 AC4 7 HOH I . ? HOH A 196 . ? 1_555 ? 18 AC4 7 HOH I . ? HOH A 248 . ? 1_555 ? 19 AC5 6 LEU A 41 ? LEU A 22 . ? 1_555 ? 20 AC5 6 PHE A 74 ? PHE A 55 . ? 1_555 ? 21 AC5 6 GLN A 87 ? GLN A 68 . ? 1_555 ? 22 AC5 6 HOH I . ? HOH A 146 . ? 1_555 ? 23 AC5 6 HOH I . ? HOH A 162 . ? 1_555 ? 24 AC5 6 HOH I . ? HOH A 279 . ? 1_555 ? 25 AC6 2 GLN A 135 ? GLN A 116 . ? 4_555 ? 26 AC6 2 ASP A 136 ? ASP A 117 . ? 1_555 ? 27 AC7 4 LEU A 114 ? LEU A 95 . ? 1_555 ? 28 AC7 4 HOH I . ? HOH A 146 . ? 1_555 ? 29 AC7 4 HOH I . ? HOH A 245 . ? 1_555 ? 30 AC7 4 HOH I . ? HOH A 279 . ? 1_555 ? # _atom_sites.entry_id 3G0K _atom_sites.fract_transf_matrix[1][1] 0.018402 _atom_sites.fract_transf_matrix[1][2] 0.010624 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021248 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010644 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 ? ? ? A . n A 1 14 ASN 14 -5 ? ? ? A . n A 1 15 LEU 15 -4 ? ? ? A . n A 1 16 TYR 16 -3 ? ? ? A . n A 1 17 PHE 17 -2 ? ? ? A . n A 1 18 GLN 18 -1 ? ? ? A . n A 1 19 GLY 19 0 ? ? ? A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 ALA 21 2 2 ALA ALA A . n A 1 22 ARG 22 3 3 ARG ARG A . n A 1 23 THR 23 4 4 THR THR A . n A 1 24 ALA 24 5 5 ALA ALA A . n A 1 25 GLU 25 6 6 GLU GLU A . n A 1 26 GLU 26 7 7 GLU GLU A . n A 1 27 GLN 27 8 8 GLN GLN A . n A 1 28 ALA 28 9 9 ALA ALA A . n A 1 29 ASN 29 10 10 ASN ASN A . n A 1 30 HIS 30 11 11 HIS HIS A . n A 1 31 ASP 31 12 12 ASP ASP A . n A 1 32 LEU 32 13 13 LEU LEU A . n A 1 33 VAL 33 14 14 VAL VAL A . n A 1 34 ILE 34 15 15 ILE ILE A . n A 1 35 GLU 35 16 16 GLU GLU A . n A 1 36 MSE 36 17 17 MSE MSE A . n A 1 37 TYR 37 18 18 TYR TYR A . n A 1 38 ASN 38 19 19 ASN ASN A . n A 1 39 LYS 39 20 20 LYS LYS A . n A 1 40 VAL 40 21 21 VAL VAL A . n A 1 41 LEU 41 22 22 LEU LEU A . n A 1 42 ILE 42 23 23 ILE ILE A . n A 1 43 ALA 43 24 24 ALA ALA A . n A 1 44 MSE 44 25 25 MSE MSE A . n A 1 45 ASP 45 26 26 ASP ASP A . n A 1 46 SER 46 27 27 SER SER A . n A 1 47 SER 47 28 28 SER SER A . n A 1 48 ALA 48 29 29 ALA ALA A . n A 1 49 VAL 49 30 30 VAL VAL A . n A 1 50 ASP 50 31 31 ASP ASP A . n A 1 51 ARG 51 32 32 ARG ARG A . n A 1 52 TYR 52 33 33 TYR TYR A . n A 1 53 ILE 53 34 34 ILE ILE A . n A 1 54 ALA 54 35 35 ALA ALA A . n A 1 55 PRO 55 36 36 PRO PRO A . n A 1 56 GLY 56 37 37 GLY GLY A . n A 1 57 TYR 57 38 38 TYR TYR A . n A 1 58 VAL 58 39 39 VAL VAL A . n A 1 59 GLN 59 40 40 GLN GLN A . n A 1 60 HIS 60 41 41 HIS HIS A . n A 1 61 SER 61 42 42 SER SER A . n A 1 62 SER 62 43 43 SER SER A . n A 1 63 LEU 63 44 44 LEU LEU A . n A 1 64 ALA 64 45 45 ALA ALA A . n A 1 65 GLU 65 46 46 GLU GLU A . n A 1 66 PRO 66 47 47 PRO PRO A . n A 1 67 SER 67 48 48 SER SER A . n A 1 68 VAL 68 49 49 VAL VAL A . n A 1 69 GLU 69 50 50 GLU GLU A . n A 1 70 ALA 70 51 51 ALA ALA A . n A 1 71 LEU 71 52 52 LEU LEU A . n A 1 72 LYS 72 53 53 LYS LYS A . n A 1 73 GLY 73 54 54 GLY GLY A . n A 1 74 PHE 74 55 55 PHE PHE A . n A 1 75 LEU 75 56 56 LEU LEU A . n A 1 76 ASP 76 57 57 ASP ASP A . n A 1 77 ARG 77 58 58 ARG ARG A . n A 1 78 VAL 78 59 59 VAL VAL A . n A 1 79 ARG 79 60 60 ARG ARG A . n A 1 80 ALA 80 61 61 ALA ALA A . n A 1 81 GLU 81 62 62 GLU GLU A . n A 1 82 SER 82 63 63 SER SER A . n A 1 83 PRO 83 64 64 PRO PRO A . n A 1 84 ASP 84 65 65 ASP ASP A . n A 1 85 ALA 85 66 66 ALA ALA A . n A 1 86 ARG 86 67 67 ARG ARG A . n A 1 87 GLN 87 68 68 GLN GLN A . n A 1 88 THR 88 69 69 THR THR A . n A 1 89 ILE 89 70 70 ILE ILE A . n A 1 90 HIS 90 71 71 HIS HIS A . n A 1 91 ARG 91 72 72 ARG ARG A . n A 1 92 SER 92 73 73 SER SER A . n A 1 93 PHE 93 74 74 PHE PHE A . n A 1 94 VAL 94 75 75 VAL VAL A . n A 1 95 ASP 95 76 76 ASP ASP A . n A 1 96 GLY 96 77 77 GLY GLY A . n A 1 97 ASP 97 78 78 ASP ASP A . n A 1 98 HIS 98 79 79 HIS HIS A . n A 1 99 VAL 99 80 80 VAL VAL A . n A 1 100 ILE 100 81 81 ILE ILE A . n A 1 101 THR 101 82 82 THR THR A . n A 1 102 HIS 102 83 83 HIS HIS A . n A 1 103 THR 103 84 84 THR THR A . n A 1 104 HIS 104 85 85 HIS HIS A . n A 1 105 VAL 105 86 86 VAL VAL A . n A 1 106 GLU 106 87 87 GLU GLU A . n A 1 107 ARG 107 88 88 ARG ARG A . n A 1 108 TRP 108 89 89 TRP TRP A . n A 1 109 PRO 109 90 90 PRO PRO A . n A 1 110 GLY 110 91 91 GLY GLY A . n A 1 111 ASP 111 92 92 ASP ASP A . n A 1 112 ALA 112 93 93 ALA ALA A . n A 1 113 GLY 113 94 94 GLY GLY A . n A 1 114 LEU 114 95 95 LEU LEU A . n A 1 115 ALA 115 96 96 ALA ALA A . n A 1 116 VAL 116 97 97 VAL VAL A . n A 1 117 VAL 117 98 98 VAL VAL A . n A 1 118 ASP 118 99 99 ASP ASP A . n A 1 119 ILE 119 100 100 ILE ILE A . n A 1 120 PHE 120 101 101 PHE PHE A . n A 1 121 ARG 121 102 102 ARG ARG A . n A 1 122 VAL 122 103 103 VAL VAL A . n A 1 123 GLU 123 104 104 GLU GLU A . n A 1 124 GLY 124 105 105 GLY GLY A . n A 1 125 GLY 125 106 106 GLY GLY A . n A 1 126 MSE 126 107 107 MSE MSE A . n A 1 127 ILE 127 108 108 ILE ILE A . n A 1 128 VAL 128 109 109 VAL VAL A . n A 1 129 GLU 129 110 110 GLU GLU A . n A 1 130 HIS 130 111 111 HIS HIS A . n A 1 131 TRP 131 112 112 TRP TRP A . n A 1 132 ASP 132 113 113 ASP ASP A . n A 1 133 VAL 133 114 114 VAL VAL A . n A 1 134 ILE 134 115 115 ILE ILE A . n A 1 135 GLN 135 116 116 GLN GLN A . n A 1 136 ASP 136 117 117 ASP ASP A . n A 1 137 VAL 137 118 118 VAL VAL A . n A 1 138 PRO 138 119 119 PRO PRO A . n A 1 139 ALA 139 120 120 ALA ALA A . n A 1 140 ASN 140 121 121 ASN ASN A . n A 1 141 PRO 141 122 122 PRO PRO A . n A 1 142 VAL 142 123 123 VAL VAL A . n A 1 143 ASN 143 124 124 ASN ASN A . n A 1 144 PRO 144 125 125 PRO PRO A . n A 1 145 ASN 145 126 126 ASN ASN A . n A 1 146 SER 146 127 127 SER SER A . n A 1 147 MSE 147 128 128 MSE MSE A . n A 1 148 PHE 148 129 129 PHE PHE A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 130 1 CA CA A . C 3 ACT 1 131 2 ACT ACT A . D 3 ACT 1 132 3 ACT ACT A . E 4 MPD 1 133 4 MPD MPD A . F 4 MPD 1 134 5 MPD MPD A . G 4 MPD 1 135 6 MPD MPD A . H 4 MPD 1 136 7 MPD MPD A . I 5 HOH 1 137 137 HOH HOH A . I 5 HOH 2 138 138 HOH HOH A . I 5 HOH 3 139 139 HOH HOH A . I 5 HOH 4 140 140 HOH HOH A . I 5 HOH 5 141 141 HOH HOH A . I 5 HOH 6 142 142 HOH HOH A . I 5 HOH 7 143 143 HOH HOH A . I 5 HOH 8 144 144 HOH HOH A . I 5 HOH 9 145 145 HOH HOH A . I 5 HOH 10 146 146 HOH HOH A . I 5 HOH 11 147 147 HOH HOH A . I 5 HOH 12 148 148 HOH HOH A . I 5 HOH 13 149 149 HOH HOH A . I 5 HOH 14 150 150 HOH HOH A . I 5 HOH 15 151 151 HOH HOH A . I 5 HOH 16 152 152 HOH HOH A . I 5 HOH 17 153 153 HOH HOH A . I 5 HOH 18 154 154 HOH HOH A . I 5 HOH 19 155 155 HOH HOH A . I 5 HOH 20 156 156 HOH HOH A . I 5 HOH 21 157 157 HOH HOH A . I 5 HOH 22 158 158 HOH HOH A . I 5 HOH 23 159 159 HOH HOH A . I 5 HOH 24 160 160 HOH HOH A . I 5 HOH 25 161 161 HOH HOH A . I 5 HOH 26 162 162 HOH HOH A . I 5 HOH 27 163 163 HOH HOH A . I 5 HOH 28 164 164 HOH HOH A . I 5 HOH 29 165 165 HOH HOH A . I 5 HOH 30 166 166 HOH HOH A . I 5 HOH 31 167 167 HOH HOH A . I 5 HOH 32 168 168 HOH HOH A . I 5 HOH 33 169 169 HOH HOH A . I 5 HOH 34 170 170 HOH HOH A . I 5 HOH 35 171 171 HOH HOH A . I 5 HOH 36 172 172 HOH HOH A . I 5 HOH 37 173 173 HOH HOH A . I 5 HOH 38 174 174 HOH HOH A . I 5 HOH 39 175 175 HOH HOH A . I 5 HOH 40 176 176 HOH HOH A . I 5 HOH 41 177 177 HOH HOH A . I 5 HOH 42 178 178 HOH HOH A . I 5 HOH 43 179 179 HOH HOH A . I 5 HOH 44 180 180 HOH HOH A . I 5 HOH 45 181 181 HOH HOH A . I 5 HOH 46 182 182 HOH HOH A . I 5 HOH 47 183 183 HOH HOH A . I 5 HOH 48 184 184 HOH HOH A . I 5 HOH 49 185 185 HOH HOH A . I 5 HOH 50 186 186 HOH HOH A . I 5 HOH 51 187 187 HOH HOH A . I 5 HOH 52 188 188 HOH HOH A . I 5 HOH 53 189 8 HOH HOH A . I 5 HOH 54 190 9 HOH HOH A . I 5 HOH 55 191 10 HOH HOH A . I 5 HOH 56 192 11 HOH HOH A . I 5 HOH 57 193 12 HOH HOH A . I 5 HOH 58 194 13 HOH HOH A . I 5 HOH 59 195 14 HOH HOH A . I 5 HOH 60 196 15 HOH HOH A . I 5 HOH 61 197 16 HOH HOH A . I 5 HOH 62 198 17 HOH HOH A . I 5 HOH 63 199 18 HOH HOH A . I 5 HOH 64 200 19 HOH HOH A . I 5 HOH 65 201 20 HOH HOH A . I 5 HOH 66 202 21 HOH HOH A . I 5 HOH 67 203 22 HOH HOH A . I 5 HOH 68 204 23 HOH HOH A . I 5 HOH 69 205 24 HOH HOH A . I 5 HOH 70 206 25 HOH HOH A . I 5 HOH 71 207 26 HOH HOH A . I 5 HOH 72 208 27 HOH HOH A . I 5 HOH 73 209 28 HOH HOH A . I 5 HOH 74 210 29 HOH HOH A . I 5 HOH 75 211 30 HOH HOH A . I 5 HOH 76 212 31 HOH HOH A . I 5 HOH 77 213 32 HOH HOH A . I 5 HOH 78 214 33 HOH HOH A . I 5 HOH 79 215 34 HOH HOH A . I 5 HOH 80 216 35 HOH HOH A . I 5 HOH 81 217 36 HOH HOH A . I 5 HOH 82 218 37 HOH HOH A . I 5 HOH 83 219 38 HOH HOH A . I 5 HOH 84 220 39 HOH HOH A . I 5 HOH 85 221 40 HOH HOH A . I 5 HOH 86 222 41 HOH HOH A . I 5 HOH 87 223 42 HOH HOH A . I 5 HOH 88 224 43 HOH HOH A . I 5 HOH 89 225 44 HOH HOH A . I 5 HOH 90 226 45 HOH HOH A . I 5 HOH 91 227 46 HOH HOH A . I 5 HOH 92 228 47 HOH HOH A . I 5 HOH 93 229 48 HOH HOH A . I 5 HOH 94 230 49 HOH HOH A . I 5 HOH 95 231 50 HOH HOH A . I 5 HOH 96 232 51 HOH HOH A . I 5 HOH 97 233 52 HOH HOH A . I 5 HOH 98 234 53 HOH HOH A . I 5 HOH 99 235 54 HOH HOH A . I 5 HOH 100 236 55 HOH HOH A . I 5 HOH 101 237 56 HOH HOH A . I 5 HOH 102 238 57 HOH HOH A . I 5 HOH 103 239 58 HOH HOH A . I 5 HOH 104 240 59 HOH HOH A . I 5 HOH 105 241 60 HOH HOH A . I 5 HOH 106 242 61 HOH HOH A . I 5 HOH 107 243 62 HOH HOH A . I 5 HOH 108 244 63 HOH HOH A . I 5 HOH 109 245 64 HOH HOH A . I 5 HOH 110 246 65 HOH HOH A . I 5 HOH 111 247 66 HOH HOH A . I 5 HOH 112 248 67 HOH HOH A . I 5 HOH 113 249 68 HOH HOH A . I 5 HOH 114 250 69 HOH HOH A . I 5 HOH 115 251 70 HOH HOH A . I 5 HOH 116 252 71 HOH HOH A . I 5 HOH 117 253 72 HOH HOH A . I 5 HOH 118 254 73 HOH HOH A . I 5 HOH 119 255 74 HOH HOH A . I 5 HOH 120 256 75 HOH HOH A . I 5 HOH 121 257 76 HOH HOH A . I 5 HOH 122 258 77 HOH HOH A . I 5 HOH 123 259 78 HOH HOH A . I 5 HOH 124 260 79 HOH HOH A . I 5 HOH 125 261 80 HOH HOH A . I 5 HOH 126 262 81 HOH HOH A . I 5 HOH 127 263 82 HOH HOH A . I 5 HOH 128 264 83 HOH HOH A . I 5 HOH 129 265 84 HOH HOH A . I 5 HOH 130 266 85 HOH HOH A . I 5 HOH 131 267 86 HOH HOH A . I 5 HOH 132 268 87 HOH HOH A . I 5 HOH 133 269 88 HOH HOH A . I 5 HOH 134 270 89 HOH HOH A . I 5 HOH 135 271 90 HOH HOH A . I 5 HOH 136 272 91 HOH HOH A . I 5 HOH 137 273 92 HOH HOH A . I 5 HOH 138 274 93 HOH HOH A . I 5 HOH 139 275 94 HOH HOH A . I 5 HOH 140 276 95 HOH HOH A . I 5 HOH 141 277 96 HOH HOH A . I 5 HOH 142 278 97 HOH HOH A . I 5 HOH 143 279 98 HOH HOH A . I 5 HOH 144 280 99 HOH HOH A . I 5 HOH 145 281 100 HOH HOH A . I 5 HOH 146 282 101 HOH HOH A . I 5 HOH 147 283 102 HOH HOH A . I 5 HOH 148 284 103 HOH HOH A . I 5 HOH 149 285 104 HOH HOH A . I 5 HOH 150 286 105 HOH HOH A . I 5 HOH 151 287 106 HOH HOH A . I 5 HOH 152 288 107 HOH HOH A . I 5 HOH 153 289 108 HOH HOH A . I 5 HOH 154 290 109 HOH HOH A . I 5 HOH 155 291 110 HOH HOH A . I 5 HOH 156 292 111 HOH HOH A . I 5 HOH 157 293 112 HOH HOH A . I 5 HOH 158 294 113 HOH HOH A . I 5 HOH 159 295 114 HOH HOH A . I 5 HOH 160 296 115 HOH HOH A . I 5 HOH 161 297 116 HOH HOH A . I 5 HOH 162 298 117 HOH HOH A . I 5 HOH 163 299 118 HOH HOH A . I 5 HOH 164 300 119 HOH HOH A . I 5 HOH 165 301 120 HOH HOH A . I 5 HOH 166 302 121 HOH HOH A . I 5 HOH 167 303 122 HOH HOH A . I 5 HOH 168 304 123 HOH HOH A . I 5 HOH 169 305 124 HOH HOH A . I 5 HOH 170 306 125 HOH HOH A . I 5 HOH 171 307 126 HOH HOH A . I 5 HOH 172 308 127 HOH HOH A . I 5 HOH 173 309 128 HOH HOH A . I 5 HOH 174 310 129 HOH HOH A . I 5 HOH 175 311 130 HOH HOH A . I 5 HOH 176 312 131 HOH HOH A . I 5 HOH 177 313 132 HOH HOH A . I 5 HOH 178 314 133 HOH HOH A . I 5 HOH 179 315 134 HOH HOH A . I 5 HOH 180 316 135 HOH HOH A . I 5 HOH 181 317 136 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 36 A MSE 17 ? MET SELENOMETHIONINE 3 A MSE 44 A MSE 25 ? MET SELENOMETHIONINE 4 A MSE 126 A MSE 107 ? MET SELENOMETHIONINE 5 A MSE 147 A MSE 128 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2760 ? 1 MORE -15.2 ? 1 'SSA (A^2)' 12460 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id CA _pdbx_struct_special_symmetry.auth_seq_id 130 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id CA _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ALA 21 ? A ALA 2 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 OE1 ? A GLU 26 ? A GLU 7 ? 1_555 77.9 ? 2 O ? A ALA 21 ? A ALA 2 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 OE2 ? A GLU 26 ? A GLU 7 ? 1_555 126.1 ? 3 OE1 ? A GLU 26 ? A GLU 7 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 OE2 ? A GLU 26 ? A GLU 7 ? 1_555 49.2 ? 4 O ? A ALA 21 ? A ALA 2 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 89.0 ? 5 OE1 ? A GLU 26 ? A GLU 7 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 80.9 ? 6 OE2 ? A GLU 26 ? A GLU 7 ? 1_555 CA ? B CA . ? A CA 130 ? 1_555 O ? I HOH . ? A HOH 204 ? 1_555 74.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_entry_details.entry_id 3G0K _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH THE N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 78 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 155 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.96 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OD2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ASP _pdbx_validate_symm_contact.auth_seq_id_1 78 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 A _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 223 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_664 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 121 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -113.28 _pdbx_validate_torsion.psi 71.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? CG ? A MSE 20 CG 2 1 Y 1 A MSE 1 ? SE ? A MSE 20 SE 3 1 Y 1 A MSE 1 ? CE ? A MSE 20 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A GLU -6 ? A GLU 13 14 1 Y 1 A ASN -5 ? A ASN 14 15 1 Y 1 A LEU -4 ? A LEU 15 16 1 Y 1 A TYR -3 ? A TYR 16 17 1 Y 1 A PHE -2 ? A PHE 17 18 1 Y 1 A GLN -1 ? A GLN 18 19 1 Y 1 A GLY 0 ? A GLY 19 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'ACETATE ION' ACT 4 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #