data_3G7P # _entry.id 3G7P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G7P pdb_00003g7p 10.2210/pdb3g7p/pdb RCSB RCSB051527 ? ? WWPDB D_1000051527 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 381741 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3G7P _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-02-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of NifX-associated protein of unknown function (YP_002425942.1) from Acidithiobacillus ferrooxidans ATCC 23270 at 2.00 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3G7P _cell.length_a 49.293 _cell.length_b 49.293 _cell.length_c 254.025 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G7P _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nitrogen fixation protein' 18249.641 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 non-polymer syn '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' 266.331 1 ? ? ? ? 5 water nat water 18.015 105 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)PENTA(MSE)AALLPEESLFFRELVKQWRAQDSYGTWEKKSD(MSE)ELLAPYVLDKEQRRAIPIIGDPDPEIL WRVELFYNAVGLATERASGV(MSE)VSP(MSE)(MSE)K(MSE)SHEGFGR(MSE)VLIAGRLIVVNKQLRDVHRFGFPS (MSE)EKLAEEGDKLVAGALE(MSE)IEKFPEVARF ; _entity_poly.pdbx_seq_one_letter_code_can ;GMPENTAMAALLPEESLFFRELVKQWRAQDSYGTWEKKSDMELLAPYVLDKEQRRAIPIIGDPDPEILWRVELFYNAVGL ATERASGVMVSPMMKMSHEGFGRMVLIAGRLIVVNKQLRDVHRFGFPSMEKLAEEGDKLVAGALEMIEKFPEVARF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 381741 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PRO n 1 4 GLU n 1 5 ASN n 1 6 THR n 1 7 ALA n 1 8 MSE n 1 9 ALA n 1 10 ALA n 1 11 LEU n 1 12 LEU n 1 13 PRO n 1 14 GLU n 1 15 GLU n 1 16 SER n 1 17 LEU n 1 18 PHE n 1 19 PHE n 1 20 ARG n 1 21 GLU n 1 22 LEU n 1 23 VAL n 1 24 LYS n 1 25 GLN n 1 26 TRP n 1 27 ARG n 1 28 ALA n 1 29 GLN n 1 30 ASP n 1 31 SER n 1 32 TYR n 1 33 GLY n 1 34 THR n 1 35 TRP n 1 36 GLU n 1 37 LYS n 1 38 LYS n 1 39 SER n 1 40 ASP n 1 41 MSE n 1 42 GLU n 1 43 LEU n 1 44 LEU n 1 45 ALA n 1 46 PRO n 1 47 TYR n 1 48 VAL n 1 49 LEU n 1 50 ASP n 1 51 LYS n 1 52 GLU n 1 53 GLN n 1 54 ARG n 1 55 ARG n 1 56 ALA n 1 57 ILE n 1 58 PRO n 1 59 ILE n 1 60 ILE n 1 61 GLY n 1 62 ASP n 1 63 PRO n 1 64 ASP n 1 65 PRO n 1 66 GLU n 1 67 ILE n 1 68 LEU n 1 69 TRP n 1 70 ARG n 1 71 VAL n 1 72 GLU n 1 73 LEU n 1 74 PHE n 1 75 TYR n 1 76 ASN n 1 77 ALA n 1 78 VAL n 1 79 GLY n 1 80 LEU n 1 81 ALA n 1 82 THR n 1 83 GLU n 1 84 ARG n 1 85 ALA n 1 86 SER n 1 87 GLY n 1 88 VAL n 1 89 MSE n 1 90 VAL n 1 91 SER n 1 92 PRO n 1 93 MSE n 1 94 MSE n 1 95 LYS n 1 96 MSE n 1 97 SER n 1 98 HIS n 1 99 GLU n 1 100 GLY n 1 101 PHE n 1 102 GLY n 1 103 ARG n 1 104 MSE n 1 105 VAL n 1 106 LEU n 1 107 ILE n 1 108 ALA n 1 109 GLY n 1 110 ARG n 1 111 LEU n 1 112 ILE n 1 113 VAL n 1 114 VAL n 1 115 ASN n 1 116 LYS n 1 117 GLN n 1 118 LEU n 1 119 ARG n 1 120 ASP n 1 121 VAL n 1 122 HIS n 1 123 ARG n 1 124 PHE n 1 125 GLY n 1 126 PHE n 1 127 PRO n 1 128 SER n 1 129 MSE n 1 130 GLU n 1 131 LYS n 1 132 LEU n 1 133 ALA n 1 134 GLU n 1 135 GLU n 1 136 GLY n 1 137 ASP n 1 138 LYS n 1 139 LEU n 1 140 VAL n 1 141 ALA n 1 142 GLY n 1 143 ALA n 1 144 LEU n 1 145 GLU n 1 146 MSE n 1 147 ILE n 1 148 GLU n 1 149 LYS n 1 150 PHE n 1 151 PRO n 1 152 GLU n 1 153 VAL n 1 154 ALA n 1 155 ARG n 1 156 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Lferr_1232, YP_002425942.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acidithiobacillus ferrooxidans ATCC 23270' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243159 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 23270 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B5ER68_ACIF5 _struct_ref.pdbx_db_accession B5ER68 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPENTAMAALLPEESLFFRELVKQWRAQDSYGTWEKKSDMELLAPYVLDKEQRRAIPIIGDPDPEILWRVELFYNAVGLA TERASGVMVSPMMKMSHEGFGRMVLIAGRLIVVNKQLRDVHRFGFPSMEKLAEEGDKLVAGALEMIEKFPEVARF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3G7P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B5ER68 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 155 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 155 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3G7P _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code B5ER68 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PG6 non-polymer . '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' ? 'C12 H26 O6' 266.331 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3G7P # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.20M Li2SO4, 30.0% PEG 4000, 0.1M Tris-HCl pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-01-08 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97925 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97925' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3G7P _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 28.228 _reflns.number_obs 13459 _reflns.pdbx_Rmerge_I_obs 0.131 _reflns.pdbx_netI_over_sigmaI 4.831 _reflns.pdbx_Rsym_value 0.131 _reflns.pdbx_redundancy 4.400 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 21.436 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.00 2.05 ? 4343 ? 0.668 1.0 0.668 ? 4.50 ? 962 100.00 1 1 2.05 2.11 ? 4302 ? 0.560 1.1 0.560 ? 4.70 ? 916 100.00 2 1 2.11 2.17 ? 4180 ? 0.459 1.4 0.459 ? 4.60 ? 915 100.00 3 1 2.17 2.24 ? 4091 ? 0.423 1.6 0.423 ? 4.60 ? 888 100.00 4 1 2.24 2.31 ? 3976 ? 0.368 1.7 0.368 ? 4.60 ? 856 100.00 5 1 2.31 2.39 ? 3698 ? 0.293 2.3 0.293 ? 4.50 ? 823 100.00 6 1 2.39 2.48 ? 3731 ? 0.274 2.4 0.274 ? 4.50 ? 824 100.00 7 1 2.48 2.58 ? 3559 ? 0.216 3.1 0.216 ? 4.60 ? 780 100.00 8 1 2.58 2.70 ? 3423 ? 0.179 3.8 0.179 ? 4.60 ? 747 100.00 9 1 2.70 2.83 ? 3268 ? 0.154 4.2 0.154 ? 4.50 ? 722 100.00 10 1 2.83 2.98 ? 3125 ? 0.152 4.5 0.152 ? 4.50 ? 689 100.00 11 1 2.98 3.16 ? 2967 ? 0.110 6.1 0.110 ? 4.40 ? 667 100.00 12 1 3.16 3.38 ? 2703 ? 0.092 7.0 0.092 ? 4.40 ? 611 100.00 13 1 3.38 3.65 ? 2605 ? 0.076 8.6 0.076 ? 4.40 ? 593 100.00 14 1 3.65 4.00 ? 2364 ? 0.068 9.5 0.068 ? 4.30 ? 547 100.00 15 1 4.00 4.47 ? 2214 ? 0.058 11.2 0.058 ? 4.20 ? 522 100.00 16 1 4.47 5.16 ? 1809 ? 0.054 12.3 0.054 ? 4.10 ? 444 100.00 17 1 5.16 6.32 ? 1618 ? 0.062 10.5 0.062 ? 3.90 ? 410 100.00 18 1 6.32 8.94 ? 1192 ? 0.060 10.1 0.060 ? 3.60 ? 327 100.00 19 1 8.94 28.228 ? 645 ? 0.044 10.8 0.044 ? 3.00 ? 216 97.00 20 1 # _refine.entry_id 3G7P _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 28.228 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.950 _refine.ls_number_reflns_obs 13359 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ETHYLENE GLYCOL (EDO), A CRYOPROTECTANT WAS MODELED INTO THE STRUCTURE. 5. SULFATE MOLECULES (SO4), AND POLYETHYLENE GLYCOL (PG6) FROM THE CRYSTALLIZATION SOLUTION WERE MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_R_work 0.204 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.249 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 659 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 40.886 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.370 _refine.aniso_B[2][2] 0.370 _refine.aniso_B[3][3] -0.560 _refine.aniso_B[1][2] 0.190 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.913 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.175 _refine.pdbx_overall_ESU_R_Free 0.163 _refine.overall_SU_ML 0.116 _refine.overall_SU_B 8.141 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 78.62 _refine.B_iso_min 20.41 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1156 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 1302 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 28.228 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1230 0.013 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 877 0.004 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 1652 1.548 2.004 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 2122 0.890 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 146 4.246 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 55 28.113 23.091 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 215 12.476 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 11 10.942 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 172 0.083 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1316 0.004 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 252 0.001 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 250 0.228 0.300 ? ? r_nbd_other 'X-RAY DIFFRACTION' 886 0.196 0.300 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 596 0.187 0.500 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 598 0.094 0.500 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 121 0.206 0.500 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 17 0.170 0.300 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 52 0.216 0.300 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 10 0.256 0.500 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 779 1.549 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 292 0.231 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1167 2.034 4.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 555 4.424 6.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 484 5.146 8.000 ? ? # _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 910 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.244 _refine_ls_shell.R_factor_R_free 0.280 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 958 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3G7P _struct.title ;Crystal structure of a nifx-associated protein of unknown function (afe_1514) from acidithiobacillus ferrooxidans atcc at 2.00 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Duf 269 family protein, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3G7P # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 12 ? GLU A 15 ? LEU A 11 GLU A 14 5 ? 4 HELX_P HELX_P2 2 SER A 16 ? ASP A 30 ? SER A 15 ASP A 29 1 ? 15 HELX_P HELX_P3 3 SER A 39 ? ALA A 45 ? SER A 38 ALA A 44 1 ? 7 HELX_P HELX_P4 4 PRO A 46 ? VAL A 48 ? PRO A 45 VAL A 47 5 ? 3 HELX_P HELX_P5 5 ASP A 50 ? ILE A 57 ? ASP A 49 ILE A 56 1 ? 8 HELX_P HELX_P6 6 ASP A 64 ? GLY A 87 ? ASP A 63 GLY A 86 1 ? 24 HELX_P HELX_P7 7 ASP A 120 ? PHE A 124 ? ASP A 119 PHE A 123 5 ? 5 HELX_P HELX_P8 8 SER A 128 ? PHE A 150 ? SER A 127 PHE A 149 1 ? 23 HELX_P HELX_P9 9 PHE A 150 ? ARG A 155 ? PHE A 149 ARG A 154 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 40 C ? ? ? 1_555 A MSE 41 N ? ? A ASP 39 A MSE 40 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale2 covale both ? A MSE 41 C ? ? ? 1_555 A GLU 42 N ? ? A MSE 40 A GLU 41 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A VAL 88 C ? ? ? 1_555 A MSE 89 N ? ? A VAL 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale4 covale both ? A MSE 89 C ? ? ? 1_555 A VAL 90 N ? ? A MSE 88 A VAL 89 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A PRO 92 C ? ? ? 1_555 A MSE 93 N ? ? A PRO 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale6 covale both ? A MSE 93 C ? ? ? 1_555 A MSE 94 N ? ? A MSE 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A MSE 94 C ? ? ? 1_555 A LYS 95 N ? ? A MSE 93 A LYS 94 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale8 covale both ? A LYS 95 C ? ? ? 1_555 A MSE 96 N ? ? A LYS 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale9 covale both ? A MSE 96 C ? ? ? 1_555 A SER 97 N ? ? A MSE 95 A SER 96 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale10 covale both ? A ARG 103 C ? ? ? 1_555 A MSE 104 N ? ? A ARG 102 A MSE 103 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? A MSE 104 C ? ? ? 1_555 A VAL 105 N ? ? A MSE 103 A VAL 104 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale12 covale both ? A SER 128 C ? ? ? 1_555 A MSE 129 N ? ? A SER 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale both ? A MSE 129 C ? ? ? 1_555 A GLU 130 N ? ? A MSE 128 A GLU 129 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale14 covale both ? A GLU 145 C ? ? ? 1_555 A MSE 146 N ? ? A GLU 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? A MSE 146 C ? ? ? 1_555 A ILE 147 N ? ? A MSE 145 A ILE 146 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 91 ? MSE A 96 ? SER A 90 MSE A 95 A 2 GLY A 102 ? ALA A 108 ? GLY A 101 ALA A 107 A 3 LEU A 111 ? LEU A 118 ? LEU A 110 LEU A 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 95 ? N LYS A 94 O ARG A 103 ? O ARG A 102 A 2 3 N ALA A 108 ? N ALA A 107 O LEU A 111 ? O LEU A 110 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 156 ? 6 'BINDING SITE FOR RESIDUE SO4 A 156' AC2 Software A SO4 157 ? 5 'BINDING SITE FOR RESIDUE SO4 A 157' AC3 Software A SO4 158 ? 2 'BINDING SITE FOR RESIDUE SO4 A 158' AC4 Software A EDO 159 ? 2 'BINDING SITE FOR RESIDUE EDO A 159' AC5 Software A EDO 160 ? 1 'BINDING SITE FOR RESIDUE EDO A 160' AC6 Software A PG6 161 ? 6 'BINDING SITE FOR RESIDUE PG6 A 161' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 51 ? LYS A 50 . ? 1_555 ? 2 AC1 6 ARG A 54 ? ARG A 53 . ? 1_555 ? 3 AC1 6 ARG A 55 ? ARG A 54 . ? 1_555 ? 4 AC1 6 PRO A 127 ? PRO A 126 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 205 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 222 . ? 1_555 ? 7 AC2 5 ASP A 50 ? ASP A 49 . ? 1_555 ? 8 AC2 5 LYS A 51 ? LYS A 50 . ? 1_555 ? 9 AC2 5 ARG A 84 ? ARG A 83 . ? 8_665 ? 10 AC2 5 HOH H . ? HOH A 205 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH A 212 . ? 1_555 ? 12 AC3 2 ARG A 110 ? ARG A 109 . ? 1_555 ? 13 AC3 2 ASN A 115 ? ASN A 114 . ? 10_554 ? 14 AC4 2 PHE A 124 ? PHE A 123 . ? 1_555 ? 15 AC4 2 GLY A 125 ? GLY A 124 . ? 1_555 ? 16 AC5 1 TRP A 69 ? TRP A 68 . ? 1_555 ? 17 AC6 6 GLN A 29 ? GLN A 28 . ? 8_555 ? 18 AC6 6 TYR A 32 ? TYR A 31 . ? 1_555 ? 19 AC6 6 TRP A 35 ? TRP A 34 . ? 8_555 ? 20 AC6 6 GLU A 66 ? GLU A 65 . ? 8_555 ? 21 AC6 6 TRP A 69 ? TRP A 68 . ? 8_555 ? 22 AC6 6 HOH H . ? HOH A 224 . ? 1_555 ? # _atom_sites.entry_id 3G7P _atom_sites.fract_transf_matrix[1][1] 0.020287 _atom_sites.fract_transf_matrix[1][2] 0.011713 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023425 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003937 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 PRO 3 2 ? ? ? A . n A 1 4 GLU 4 3 ? ? ? A . n A 1 5 ASN 5 4 ? ? ? A . n A 1 6 THR 6 5 ? ? ? A . n A 1 7 ALA 7 6 ? ? ? A . n A 1 8 MSE 8 7 ? ? ? A . n A 1 9 ALA 9 8 ? ? ? A . n A 1 10 ALA 10 9 ? ? ? A . n A 1 11 LEU 11 10 ? ? ? A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 PRO 13 12 12 PRO PRO A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 PHE 19 18 18 PHE PHE A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 VAL 23 22 22 VAL VAL A . n A 1 24 LYS 24 23 23 LYS LYS A . n A 1 25 GLN 25 24 24 GLN GLN A . n A 1 26 TRP 26 25 25 TRP TRP A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 ASP 30 29 29 ASP ASP A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 TYR 32 31 31 TYR TYR A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 TRP 35 34 34 TRP TRP A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 ASP 40 39 39 ASP ASP A . n A 1 41 MSE 41 40 40 MSE MSE A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 TYR 47 46 46 TYR TYR A . n A 1 48 VAL 48 47 47 VAL VAL A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 GLN 53 52 52 GLN GLN A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 ARG 55 54 54 ARG ARG A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 PRO 58 57 57 PRO PRO A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 PRO 63 62 62 PRO PRO A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 PRO 65 64 64 PRO PRO A . n A 1 66 GLU 66 65 65 GLU GLU A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 TRP 69 68 68 TRP TRP A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 GLU 72 71 71 GLU GLU A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 PHE 74 73 73 PHE PHE A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 ALA 81 80 80 ALA ALA A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 GLU 83 82 82 GLU GLU A . n A 1 84 ARG 84 83 83 ARG ARG A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 MSE 89 88 88 MSE MSE A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 MSE 93 92 92 MSE MSE A . n A 1 94 MSE 94 93 93 MSE MSE A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 MSE 96 95 95 MSE MSE A . n A 1 97 SER 97 96 96 SER SER A . n A 1 98 HIS 98 97 97 HIS HIS A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 GLY 102 101 101 GLY GLY A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 MSE 104 103 103 MSE MSE A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 ILE 107 106 106 ILE ILE A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 ARG 110 109 109 ARG ARG A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 ILE 112 111 111 ILE ILE A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 LYS 116 115 115 LYS LYS A . n A 1 117 GLN 117 116 116 GLN GLN A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 HIS 122 121 121 HIS HIS A . n A 1 123 ARG 123 122 122 ARG ARG A . n A 1 124 PHE 124 123 123 PHE PHE A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 PHE 126 125 125 PHE PHE A . n A 1 127 PRO 127 126 126 PRO PRO A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 MSE 129 128 128 MSE MSE A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 LYS 131 130 130 LYS LYS A . n A 1 132 LEU 132 131 131 LEU LEU A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 GLU 135 134 134 GLU GLU A . n A 1 136 GLY 136 135 135 GLY GLY A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 LYS 138 137 137 LYS LYS A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 GLU 145 144 144 GLU GLU A . n A 1 146 MSE 146 145 145 MSE MSE A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 GLU 148 147 147 GLU GLU A . n A 1 149 LYS 149 148 148 LYS LYS A . n A 1 150 PHE 150 149 149 PHE PHE A . n A 1 151 PRO 151 150 150 PRO PRO A . n A 1 152 GLU 152 151 151 GLU GLU A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 ARG 155 154 154 ARG ARG A . n A 1 156 PHE 156 155 155 PHE PHE A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 156 1 SO4 SO4 A . C 2 SO4 1 157 2 SO4 SO4 A . D 2 SO4 1 158 3 SO4 SO4 A . E 3 EDO 1 159 4 EDO EDO A . F 3 EDO 1 160 5 EDO EDO A . G 4 PG6 1 161 6 PG6 PG6 A . H 5 HOH 1 162 7 HOH HOH A . H 5 HOH 2 163 8 HOH HOH A . H 5 HOH 3 164 9 HOH HOH A . H 5 HOH 4 165 10 HOH HOH A . H 5 HOH 5 166 11 HOH HOH A . H 5 HOH 6 167 12 HOH HOH A . H 5 HOH 7 168 13 HOH HOH A . H 5 HOH 8 169 14 HOH HOH A . H 5 HOH 9 170 15 HOH HOH A . H 5 HOH 10 171 16 HOH HOH A . H 5 HOH 11 172 17 HOH HOH A . H 5 HOH 12 173 18 HOH HOH A . H 5 HOH 13 174 19 HOH HOH A . H 5 HOH 14 175 20 HOH HOH A . H 5 HOH 15 176 21 HOH HOH A . H 5 HOH 16 177 22 HOH HOH A . H 5 HOH 17 178 23 HOH HOH A . H 5 HOH 18 179 24 HOH HOH A . H 5 HOH 19 180 25 HOH HOH A . H 5 HOH 20 181 26 HOH HOH A . H 5 HOH 21 182 27 HOH HOH A . H 5 HOH 22 183 28 HOH HOH A . H 5 HOH 23 184 29 HOH HOH A . H 5 HOH 24 185 30 HOH HOH A . H 5 HOH 25 186 31 HOH HOH A . H 5 HOH 26 187 32 HOH HOH A . H 5 HOH 27 188 33 HOH HOH A . H 5 HOH 28 189 34 HOH HOH A . H 5 HOH 29 190 35 HOH HOH A . H 5 HOH 30 191 36 HOH HOH A . H 5 HOH 31 192 37 HOH HOH A . H 5 HOH 32 193 38 HOH HOH A . H 5 HOH 33 194 39 HOH HOH A . H 5 HOH 34 195 40 HOH HOH A . H 5 HOH 35 196 41 HOH HOH A . H 5 HOH 36 197 42 HOH HOH A . H 5 HOH 37 198 43 HOH HOH A . H 5 HOH 38 199 44 HOH HOH A . H 5 HOH 39 200 45 HOH HOH A . H 5 HOH 40 201 46 HOH HOH A . H 5 HOH 41 202 47 HOH HOH A . H 5 HOH 42 203 48 HOH HOH A . H 5 HOH 43 204 49 HOH HOH A . H 5 HOH 44 205 50 HOH HOH A . H 5 HOH 45 206 51 HOH HOH A . H 5 HOH 46 207 52 HOH HOH A . H 5 HOH 47 208 53 HOH HOH A . H 5 HOH 48 209 54 HOH HOH A . H 5 HOH 49 210 55 HOH HOH A . H 5 HOH 50 211 56 HOH HOH A . H 5 HOH 51 212 57 HOH HOH A . H 5 HOH 52 213 58 HOH HOH A . H 5 HOH 53 214 59 HOH HOH A . H 5 HOH 54 215 60 HOH HOH A . H 5 HOH 55 216 61 HOH HOH A . H 5 HOH 56 217 62 HOH HOH A . H 5 HOH 57 218 63 HOH HOH A . H 5 HOH 58 219 64 HOH HOH A . H 5 HOH 59 220 65 HOH HOH A . H 5 HOH 60 221 66 HOH HOH A . H 5 HOH 61 222 67 HOH HOH A . H 5 HOH 62 223 68 HOH HOH A . H 5 HOH 63 224 69 HOH HOH A . H 5 HOH 64 225 70 HOH HOH A . H 5 HOH 65 226 71 HOH HOH A . H 5 HOH 66 227 72 HOH HOH A . H 5 HOH 67 228 73 HOH HOH A . H 5 HOH 68 229 74 HOH HOH A . H 5 HOH 69 230 75 HOH HOH A . H 5 HOH 70 231 76 HOH HOH A . H 5 HOH 71 232 77 HOH HOH A . H 5 HOH 72 233 78 HOH HOH A . H 5 HOH 73 234 79 HOH HOH A . H 5 HOH 74 235 80 HOH HOH A . H 5 HOH 75 236 81 HOH HOH A . H 5 HOH 76 237 82 HOH HOH A . H 5 HOH 77 238 83 HOH HOH A . H 5 HOH 78 239 84 HOH HOH A . H 5 HOH 79 240 85 HOH HOH A . H 5 HOH 80 241 86 HOH HOH A . H 5 HOH 81 242 87 HOH HOH A . H 5 HOH 82 243 88 HOH HOH A . H 5 HOH 83 244 89 HOH HOH A . H 5 HOH 84 245 90 HOH HOH A . H 5 HOH 85 246 91 HOH HOH A . H 5 HOH 86 247 92 HOH HOH A . H 5 HOH 87 248 93 HOH HOH A . H 5 HOH 88 249 94 HOH HOH A . H 5 HOH 89 250 95 HOH HOH A . H 5 HOH 90 251 96 HOH HOH A . H 5 HOH 91 252 97 HOH HOH A . H 5 HOH 92 253 98 HOH HOH A . H 5 HOH 93 254 99 HOH HOH A . H 5 HOH 94 255 100 HOH HOH A . H 5 HOH 95 256 101 HOH HOH A . H 5 HOH 96 257 102 HOH HOH A . H 5 HOH 97 258 103 HOH HOH A . H 5 HOH 98 259 104 HOH HOH A . H 5 HOH 99 260 105 HOH HOH A . H 5 HOH 100 261 106 HOH HOH A . H 5 HOH 101 262 107 HOH HOH A . H 5 HOH 102 263 108 HOH HOH A . H 5 HOH 103 264 109 HOH HOH A . H 5 HOH 104 265 110 HOH HOH A . H 5 HOH 105 266 111 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 41 A MSE 40 ? MET SELENOMETHIONINE 2 A MSE 89 A MSE 88 ? MET SELENOMETHIONINE 3 A MSE 93 A MSE 92 ? MET SELENOMETHIONINE 4 A MSE 94 A MSE 93 ? MET SELENOMETHIONINE 5 A MSE 96 A MSE 95 ? MET SELENOMETHIONINE 6 A MSE 104 A MSE 103 ? MET SELENOMETHIONINE 7 A MSE 129 A MSE 128 ? MET SELENOMETHIONINE 8 A MSE 146 A MSE 145 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1700 ? 1 MORE -12.3 ? 1 'SSA (A^2)' 15200 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -42.3375000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -7.9983 _pdbx_refine_tls.origin_y 15.7920 _pdbx_refine_tls.origin_z -9.1465 _pdbx_refine_tls.T[1][1] -0.2125 _pdbx_refine_tls.T[2][2] -0.1788 _pdbx_refine_tls.T[3][3] -0.1933 _pdbx_refine_tls.T[1][2] -0.0085 _pdbx_refine_tls.T[1][3] 0.0218 _pdbx_refine_tls.T[2][3] -0.0364 _pdbx_refine_tls.L[1][1] 3.9557 _pdbx_refine_tls.L[2][2] 1.1441 _pdbx_refine_tls.L[3][3] 2.8802 _pdbx_refine_tls.L[1][2] -0.4876 _pdbx_refine_tls.L[1][3] 2.0958 _pdbx_refine_tls.L[2][3] -0.4513 _pdbx_refine_tls.S[1][1] 0.0041 _pdbx_refine_tls.S[2][2] -0.0825 _pdbx_refine_tls.S[3][3] 0.0784 _pdbx_refine_tls.S[1][2] 0.3258 _pdbx_refine_tls.S[1][3] -0.0790 _pdbx_refine_tls.S[2][3] -0.1411 _pdbx_refine_tls.S[2][1] -0.0864 _pdbx_refine_tls.S[3][1] 0.0112 _pdbx_refine_tls.S[3][2] 0.2414 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id 12 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 155 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_entry_details.entry_id 3G7P _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 22-363 OF THE FULL LENGTH PROTEIN. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 186 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 186 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_554 _pdbx_validate_symm_contact.dist 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 40 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 40 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 40 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 71.37 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation -27.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 96 ? ? -104.56 -153.23 2 1 GLU A 98 ? ? -122.88 -104.74 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 35 ? CG ? A GLU 36 CG 2 1 Y 1 A GLU 35 ? CD ? A GLU 36 CD 3 1 Y 1 A GLU 35 ? OE1 ? A GLU 36 OE1 4 1 Y 1 A GLU 35 ? OE2 ? A GLU 36 OE2 5 1 Y 1 A LYS 36 ? CD ? A LYS 37 CD 6 1 Y 1 A LYS 36 ? CE ? A LYS 37 CE 7 1 Y 1 A LYS 36 ? NZ ? A LYS 37 NZ 8 1 Y 1 A LYS 50 ? CG ? A LYS 51 CG 9 1 Y 1 A LYS 50 ? CD ? A LYS 51 CD 10 1 Y 1 A LYS 50 ? CE ? A LYS 51 CE 11 1 Y 1 A LYS 50 ? NZ ? A LYS 51 NZ 12 1 Y 1 A ARG 118 ? CD ? A ARG 119 CD 13 1 Y 1 A ARG 118 ? NE ? A ARG 119 NE 14 1 Y 1 A ARG 118 ? CZ ? A ARG 119 CZ 15 1 Y 1 A ARG 118 ? NH1 ? A ARG 119 NH1 16 1 Y 1 A ARG 118 ? NH2 ? A ARG 119 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A PRO 2 ? A PRO 3 4 1 Y 1 A GLU 3 ? A GLU 4 5 1 Y 1 A ASN 4 ? A ASN 5 6 1 Y 1 A THR 5 ? A THR 6 7 1 Y 1 A ALA 6 ? A ALA 7 8 1 Y 1 A MSE 7 ? A MSE 8 9 1 Y 1 A ALA 8 ? A ALA 9 10 1 Y 1 A ALA 9 ? A ALA 10 11 1 Y 1 A LEU 10 ? A LEU 11 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 '1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE' PG6 5 water HOH #