HEADER HYDROLASE/DNA 16-FEB-09 3GA6 TITLE MTH0212 IN COMPLEX WITH TWO DNA HELICES COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXODEOXYRIBONUCLEASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MTH0212; COMPND 5 EC: 3.1.11.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*C)-3'; COMPND 10 CHAIN: F, H; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*GP*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3'; COMPND 14 CHAIN: G, D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS; SOURCE 3 ORGANISM_TAXID: 187420; SOURCE 4 STRAIN: DELTA H (DSM 1053); SOURCE 5 GENE: MTH0212, MTH212, MTH_212; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET_B_001-MTH212 (D151N); SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES KEYWDS PROTEIN-DNA COMPLEX, TWIN, DISORDER OF DNA, 3'-5' EXONUCLEASE, AP KEYWDS 2 ENDONUCLEASE, 2'-DESOXYURIDINE ENDONUCLEASE, HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.LAKOMEK,A.DICKMANNS,R.FICNER REVDAT 7 01-NOV-23 3GA6 1 REMARK DBREF SEQADV REVDAT 6 01-NOV-17 3GA6 1 REMARK REVDAT 5 12-FEB-14 3GA6 1 REMARK VERSN REVDAT 4 23-JUN-10 3GA6 1 JRNL REVDAT 3 19-MAY-10 3GA6 1 JRNL REVDAT 2 12-MAY-10 3GA6 1 JRNL REVDAT 1 09-MAR-10 3GA6 0 JRNL AUTH K.LAKOMEK,A.DICKMANNS,E.CIIRDAEVA,L.SCHOMACHER,R.FICNER JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF DNA URIDINE ENDONUCLEASE JRNL TITL 2 MTH212 BOUND TO DNA JRNL REF J.MOL.BIOL. V. 399 604 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20434457 JRNL DOI 10.1016/J.JMB.2010.04.044 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.GEORG,L.SCHOMACHER,J.P.J.CHONG,A.I.MAJERNIK,M.RAABE, REMARK 1 AUTH 2 H.URLAUB,S.MULLER,E.CIIRDAEVA,W.KRAMER,H.-J.FRITZ REMARK 1 TITL THE METHANOTHERMOBACTER THERMAUTOTROPHICUS EXOIII HOMOLOGUE REMARK 1 TITL 2 MTH212 IS A DNA URIDINE ENDONUCLEASE REMARK 1 REF NUCLEIC ACIDS RES. V. 34 5325 2006 REMARK 1 REFN ISSN 0305-1048 REMARK 1 PMID 17012282 REMARK 1 DOI 10.1093/NAR/GKL604 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.060 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 52596 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.320 REMARK 3 FREE R VALUE TEST SET COUNT : 3326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7140 - 5.1470 0.98 2764 231 0.1610 0.2010 REMARK 3 2 5.1470 - 4.0880 0.98 2748 179 0.0960 0.1550 REMARK 3 3 4.0880 - 3.5720 0.98 2759 167 0.1150 0.1700 REMARK 3 4 3.5720 - 3.2450 0.98 2781 140 0.1240 0.1850 REMARK 3 5 3.2450 - 3.0130 0.98 2679 201 0.1410 0.1740 REMARK 3 6 3.0130 - 2.8350 0.98 2670 165 0.1590 0.2530 REMARK 3 7 2.8350 - 2.6930 0.98 2658 159 0.1670 0.1890 REMARK 3 8 2.6930 - 2.5760 0.98 2626 157 0.1750 0.2270 REMARK 3 9 2.5760 - 2.4770 0.98 2581 139 0.1820 0.2300 REMARK 3 10 2.4770 - 2.3920 0.98 2536 134 0.1900 0.2350 REMARK 3 11 2.3920 - 2.3170 0.98 2580 177 0.1900 0.2090 REMARK 3 12 2.3170 - 2.2510 0.98 2514 150 0.1950 0.2400 REMARK 3 13 2.2510 - 2.1910 0.98 2447 171 0.1960 0.2330 REMARK 3 14 2.1910 - 2.1380 0.98 2600 152 0.2010 0.2380 REMARK 3 15 2.1380 - 2.0890 0.98 2521 189 0.2100 0.2560 REMARK 3 16 2.0890 - 2.0450 0.98 2429 143 0.2220 0.2840 REMARK 3 17 2.0450 - 2.0040 0.98 2284 169 0.2310 0.2860 REMARK 3 18 2.0040 - 1.9660 0.98 1934 138 0.2380 0.2460 REMARK 3 19 1.9660 - 1.9310 0.98 1776 136 0.2600 0.2380 REMARK 3 20 1.9310 - 1.8980 0.98 1540 72 0.2710 0.2870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 52.63 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.51500 REMARK 3 B22 (A**2) : 5.79800 REMARK 3 B33 (A**2) : -3.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.49400 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5050 REMARK 3 OPERATOR: L,-K,H REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5476 REMARK 3 ANGLE : 1.359 7543 REMARK 3 CHIRALITY : 0.088 760 REMARK 3 PLANARITY : 0.005 813 REMARK 3 DIHEDRAL : 22.340 2081 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 23.1185 8.0566 -3.6572 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.0837 REMARK 3 T33: 0.0712 T12: -0.0158 REMARK 3 T13: 0.0062 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.4290 L22: 0.4577 REMARK 3 L33: 0.7251 L12: -0.3030 REMARK 3 L13: 0.5311 L23: -0.3302 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: 0.1158 S13: 0.0138 REMARK 3 S21: 0.0563 S22: -0.0090 S23: -0.0084 REMARK 3 S31: -0.0569 S32: 0.1366 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -4.9497 -8.2282 22.8991 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.0835 REMARK 3 T33: 0.0733 T12: 0.0091 REMARK 3 T13: 0.0059 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.7827 L22: 0.4720 REMARK 3 L33: 0.4368 L12: 0.2500 REMARK 3 L13: 0.5353 L23: 0.2109 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: -0.0665 S13: -0.0539 REMARK 3 S21: 0.0134 S22: 0.0512 S23: -0.0157 REMARK 3 S31: 0.0039 S32: -0.0599 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56272 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.898 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.60700 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3FZI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION: 5% (W/V) PEG 8000, REMARK 280 200MM KCL, 10 MM MGCL2, 50MM MES PH 5.6, 2MM DTT; COMPLEX REMARK 280 SOLUTION: 245MM NACL, 8MM HEPES-KOH PH 7.6, 2MM MGCL2, 3MM DTT , REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.32750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1001 REMARK 465 ALA A 1002 REMARK 465 LEU A 1257 REMARK 465 LEU A 1258 REMARK 465 GLU A 1259 REMARK 465 HIS A 1260 REMARK 465 HIS A 1261 REMARK 465 HIS A 1262 REMARK 465 HIS A 1263 REMARK 465 HIS A 1264 REMARK 465 HIS A 1265 REMARK 465 MET B 2001 REMARK 465 LEU B 2257 REMARK 465 LEU B 2258 REMARK 465 GLU B 2259 REMARK 465 HIS B 2260 REMARK 465 HIS B 2261 REMARK 465 HIS B 2262 REMARK 465 HIS B 2263 REMARK 465 HIS B 2264 REMARK 465 HIS B 2265 REMARK 465 DC F 12 REMARK 465 DG H 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG G 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DG G 1 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG G 1 C2 N2 N3 C4 REMARK 470 DC G 12 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DC G 12 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC G 12 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG G 1 O3' DC G 2 P -0.124 REMARK 500 DG G 11 O3' DG G 11 C3' 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC F 5 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG F 6 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG F 11 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT G 5 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG G 6 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG G 11 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 DG G 11 C3' - O3' - P ANGL. DEV. = 18.1 DEGREES REMARK 500 DT H 2 C1' - O4' - C4' ANGL. DEV. = -6.9 DEGREES REMARK 500 DT H 2 O4' - C1' - C2' ANGL. DEV. = -4.9 DEGREES REMARK 500 DC H 4 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC H 6 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG H 9 C1' - O4' - C4' ANGL. DEV. = -6.8 DEGREES REMARK 500 DG H 9 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 DC H 11 O4' - C1' - N1 ANGL. DEV. = 5.1 DEGREES REMARK 500 DC D 4 O4' - C1' - N1 ANGL. DEV. = 6.2 DEGREES REMARK 500 DG D 6 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 DA D 10 O4' - C4' - C3' ANGL. DEV. = -4.5 DEGREES REMARK 500 DA D 10 C4' - C3' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DA D 10 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DG D 11 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A1020 43.40 -97.76 REMARK 500 SER A1069 -149.05 51.36 REMARK 500 ASP A1103 -73.48 69.92 REMARK 500 ARG A1163 67.49 -119.77 REMARK 500 THR A1210 19.46 84.01 REMARK 500 ASN A1216 44.38 30.59 REMARK 500 ASN B2012 73.04 50.65 REMARK 500 ALA B2041 148.22 -171.32 REMARK 500 SER B2069 -132.12 53.71 REMARK 500 ASP B2103 -62.81 69.79 REMARK 500 PHE B2105 159.61 173.62 REMARK 500 PHE B2173 31.94 -152.15 REMARK 500 ASN B2216 43.09 39.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A7401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A1032 O REMARK 620 2 THR A1075 OG1 77.7 REMARK 620 3 GOL A7006 O3 128.3 73.6 REMARK 620 4 HOH A9008 O 108.6 164.1 110.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7013 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7015 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7020 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7024 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7030 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7031 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 7401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7003 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7011 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7021 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7022 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7027 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7032 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 7033 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 7204 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 7205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FZI RELATED DB: PDB REMARK 900 1.9 ANGSTROM STRUCTURE OF THE THERMOPHILIC EXONUCLEASE III REMARK 900 HOMOLOGUE MTH0212 REMARK 900 RELATED ID: 3G00 RELATED DB: PDB REMARK 900 MTH0212 IN COMPLEX WITH A 9BP BLUNT END DSDNA AT 1.7 ANGSTROM REMARK 900 RELATED ID: 3G0A RELATED DB: PDB REMARK 900 MTH0212 WITH TWO BOUND MANGANESE IONS REMARK 900 RELATED ID: 3G0R RELATED DB: PDB REMARK 900 COMPLEX OF MTH0212 AND AN 8BP DSDNA WITH DISTORTED ENDS REMARK 900 RELATED ID: 3G2C RELATED DB: PDB REMARK 900 MTH0212 IN COMPLEX WITH A SHORT SSDNA (CGTA) REMARK 900 RELATED ID: 3G2D RELATED DB: PDB REMARK 900 COMPLEX OF MTH0212 AND A 4 BP DSDNA WITH 3'-OVERHANG REMARK 900 RELATED ID: 3G38 RELATED DB: PDB REMARK 900 THE CATALYTICALLY INACTIVE MUTANT MTH0212 (D151N) IN COMPLEX WITH REMARK 900 AN 8 BP DSDNA REMARK 900 RELATED ID: 3G3C RELATED DB: PDB REMARK 900 MTH0212 (WT) IN COMPLEX WITH A 6BP DSDNA CONTAINING A SINGLE ONE REMARK 900 NUCLEOTIDE LONG 3'-OVERHANG REMARK 900 RELATED ID: 3G1K RELATED DB: PDB REMARK 900 MTH0212 (WT) CRYSTALLIZED IN A MONOCLINIC SPACE GROUP REMARK 900 RELATED ID: 3G3Y RELATED DB: PDB REMARK 900 MTH0212 IN COMPLEX WITH SSDNA IN SPACE GROUP P32 REMARK 900 RELATED ID: 3G4T RELATED DB: PDB REMARK 900 MTH0212 (WT) IN COMPLEX WITH A 7BP DSDNA REMARK 900 RELATED ID: 3G8V RELATED DB: PDB REMARK 900 THE RATIONALLY DESIGNED CATALYTICALLY INACTIVE MUTANT MTH0212(D151N) REMARK 900 RELATED ID: 3G91 RELATED DB: PDB REMARK 900 1.2 ANGSTROM STRUCTURE OF THE EXONUCLEASE III HOMOLOGUE MTH0212 DBREF 3GA6 A 1001 1257 UNP O26314 O26314_METTH 1 257 DBREF 3GA6 B 2001 2257 UNP O26314 O26314_METTH 1 257 DBREF 3GA6 F 1 12 PDB 3GA6 3GA6 1 12 DBREF 3GA6 G 1 12 PDB 3GA6 3GA6 1 12 DBREF 3GA6 H 0 11 PDB 3GA6 3GA6 0 11 DBREF 3GA6 D 1 12 PDB 3GA6 3GA6 1 12 SEQADV 3GA6 ALA A 1002 UNP O26314 THR 2 ENGINEERED MUTATION SEQADV 3GA6 ASN A 1151 UNP O26314 ASP 151 ENGINEERED MUTATION SEQADV 3GA6 LEU A 1258 UNP O26314 EXPRESSION TAG SEQADV 3GA6 GLU A 1259 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1260 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1261 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1262 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1263 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1264 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS A 1265 UNP O26314 EXPRESSION TAG SEQADV 3GA6 ALA B 2002 UNP O26314 THR 2 ENGINEERED MUTATION SEQADV 3GA6 ASN B 2151 UNP O26314 ASP 151 ENGINEERED MUTATION SEQADV 3GA6 LEU B 2258 UNP O26314 EXPRESSION TAG SEQADV 3GA6 GLU B 2259 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2260 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2261 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2262 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2263 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2264 UNP O26314 EXPRESSION TAG SEQADV 3GA6 HIS B 2265 UNP O26314 EXPRESSION TAG SEQRES 1 A 265 MET ALA VAL LEU LYS ILE ILE SER TRP ASN VAL ASN GLY SEQRES 2 A 265 LEU ARG ALA VAL HIS ARG LYS GLY PHE LEU LYS TRP PHE SEQRES 3 A 265 MET GLU GLU LYS PRO ASP ILE LEU CYS LEU GLN GLU ILE SEQRES 4 A 265 LYS ALA ALA PRO GLU GLN LEU PRO ARG LYS LEU ARG HIS SEQRES 5 A 265 VAL GLU GLY TYR ARG SER PHE PHE THR PRO ALA GLU ARG SEQRES 6 A 265 LYS GLY TYR SER GLY VAL ALA MET TYR THR LYS VAL PRO SEQRES 7 A 265 PRO SER SER LEU ARG GLU GLY PHE GLY VAL GLU ARG PHE SEQRES 8 A 265 ASP THR GLU GLY ARG ILE GLN ILE ALA ASP PHE ASP ASP SEQRES 9 A 265 PHE LEU LEU TYR ASN ILE TYR PHE PRO ASN GLY LYS MET SEQRES 10 A 265 SER GLU GLU ARG LEU LYS TYR LYS LEU GLU PHE TYR ASP SEQRES 11 A 265 ALA PHE LEU GLU ASP VAL ASN ARG GLU ARG ASP SER GLY SEQRES 12 A 265 ARG ASN VAL ILE ILE CYS GLY ASN PHE ASN THR ALA HIS SEQRES 13 A 265 ARG GLU ILE ASP LEU ALA ARG PRO LYS GLU ASN SER ASN SEQRES 14 A 265 VAL SER GLY PHE LEU PRO VAL GLU ARG ALA TRP ILE ASP SEQRES 15 A 265 LYS PHE ILE GLU ASN GLY TYR VAL ASP THR PHE ARG MET SEQRES 16 A 265 PHE ASN SER ASP PRO GLY GLN TYR THR TRP TRP SER TYR SEQRES 17 A 265 ARG THR ARG ALA ARG GLU ARG ASN VAL GLY TRP ARG LEU SEQRES 18 A 265 ASP TYR PHE PHE VAL ASN GLU GLU PHE LYS GLY LYS VAL SEQRES 19 A 265 LYS ARG SER TRP ILE LEU SER ASP VAL MET GLY SER ASP SEQRES 20 A 265 HIS CYS PRO ILE GLY LEU GLU ILE GLU LEU LEU GLU HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS SEQRES 1 B 265 MET ALA VAL LEU LYS ILE ILE SER TRP ASN VAL ASN GLY SEQRES 2 B 265 LEU ARG ALA VAL HIS ARG LYS GLY PHE LEU LYS TRP PHE SEQRES 3 B 265 MET GLU GLU LYS PRO ASP ILE LEU CYS LEU GLN GLU ILE SEQRES 4 B 265 LYS ALA ALA PRO GLU GLN LEU PRO ARG LYS LEU ARG HIS SEQRES 5 B 265 VAL GLU GLY TYR ARG SER PHE PHE THR PRO ALA GLU ARG SEQRES 6 B 265 LYS GLY TYR SER GLY VAL ALA MET TYR THR LYS VAL PRO SEQRES 7 B 265 PRO SER SER LEU ARG GLU GLY PHE GLY VAL GLU ARG PHE SEQRES 8 B 265 ASP THR GLU GLY ARG ILE GLN ILE ALA ASP PHE ASP ASP SEQRES 9 B 265 PHE LEU LEU TYR ASN ILE TYR PHE PRO ASN GLY LYS MET SEQRES 10 B 265 SER GLU GLU ARG LEU LYS TYR LYS LEU GLU PHE TYR ASP SEQRES 11 B 265 ALA PHE LEU GLU ASP VAL ASN ARG GLU ARG ASP SER GLY SEQRES 12 B 265 ARG ASN VAL ILE ILE CYS GLY ASN PHE ASN THR ALA HIS SEQRES 13 B 265 ARG GLU ILE ASP LEU ALA ARG PRO LYS GLU ASN SER ASN SEQRES 14 B 265 VAL SER GLY PHE LEU PRO VAL GLU ARG ALA TRP ILE ASP SEQRES 15 B 265 LYS PHE ILE GLU ASN GLY TYR VAL ASP THR PHE ARG MET SEQRES 16 B 265 PHE ASN SER ASP PRO GLY GLN TYR THR TRP TRP SER TYR SEQRES 17 B 265 ARG THR ARG ALA ARG GLU ARG ASN VAL GLY TRP ARG LEU SEQRES 18 B 265 ASP TYR PHE PHE VAL ASN GLU GLU PHE LYS GLY LYS VAL SEQRES 19 B 265 LYS ARG SER TRP ILE LEU SER ASP VAL MET GLY SER ASP SEQRES 20 B 265 HIS CYS PRO ILE GLY LEU GLU ILE GLU LEU LEU GLU HIS SEQRES 21 B 265 HIS HIS HIS HIS HIS SEQRES 1 F 12 DG DC DT DG DC DG DC DA DG DG DG DC SEQRES 1 G 12 DG DC DC DC DT DG DU DG DC DA DG DC SEQRES 1 H 12 DG DC DT DG DC DG DC DA DG DG DG DC SEQRES 1 D 12 DG DC DC DC DT DG DU DG DC DA DG DC HET GOL A7002 6 HET GOL A7004 6 HET GOL A7006 6 HET GOL A7010 6 HET GOL A7012 6 HET GOL A7013 6 HET GOL A7015 6 HET GOL A7020 6 HET GOL A7024 6 HET GOL A7030 6 HET GOL A7031 6 HET NA A7401 1 HET GOL B7003 6 HET GOL B7009 6 HET GOL B7011 6 HET GOL B7021 6 HET GOL B7022 6 HET GOL B7027 6 HET GOL B7032 6 HET GOL B7033 6 HET PO4 B7204 5 HET PO4 B7205 5 HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 GOL 19(C3 H8 O3) FORMUL 18 NA NA 1+ FORMUL 27 PO4 2(O4 P 3-) FORMUL 29 HOH *354(H2 O) HELIX 1 1 GLY A 1013 LYS A 1020 1 8 HELIX 2 2 GLY A 1021 LYS A 1030 1 10 HELIX 3 3 ALA A 1042 LEU A 1046 5 5 HELIX 4 4 PRO A 1047 HIS A 1052 1 6 HELIX 5 5 VAL A 1088 THR A 1093 1 6 HELIX 6 6 SER A 1118 ASP A 1141 1 24 HELIX 7 7 ARG A 1157 LEU A 1161 5 5 HELIX 8 8 LEU A 1174 ASN A 1187 1 14 HELIX 9 9 PHE A 1193 PHE A 1196 5 4 HELIX 10 10 PHE A 1230 GLY A 1232 5 3 HELIX 11 11 GLY B 2013 ARG B 2019 1 7 HELIX 12 12 GLY B 2021 LYS B 2030 1 10 HELIX 13 13 ALA B 2042 LEU B 2046 5 5 HELIX 14 14 PRO B 2047 HIS B 2052 1 6 HELIX 15 15 VAL B 2088 THR B 2093 1 6 HELIX 16 16 SER B 2118 SER B 2142 1 25 HELIX 17 17 ARG B 2157 LEU B 2161 5 5 HELIX 18 18 PRO B 2164 SER B 2168 5 5 HELIX 19 19 LEU B 2174 ASN B 2187 1 14 HELIX 20 20 THR B 2192 ASN B 2197 1 6 HELIX 21 21 GLU B 2229 LYS B 2231 5 3 SHEET 1 A 6 ARG A1057 THR A1061 0 SHEET 2 A 6 VAL A1071 THR A1075 -1 O MET A1073 N PHE A1059 SHEET 3 A 6 ILE A1033 GLN A1037 -1 N LEU A1036 O ALA A1072 SHEET 4 A 6 LEU A1004 ASN A1010 1 N ILE A1007 O CYS A1035 SHEET 5 A 6 ILE A1251 ILE A1255 -1 O LEU A1253 N ILE A1006 SHEET 6 A 6 VAL A1234 ILE A1239 -1 N TRP A1238 O GLY A1252 SHEET 1 B 6 LEU A1082 ARG A1083 0 SHEET 2 B 6 ILE A1097 ASP A1101 -1 O ILE A1099 N ARG A1083 SHEET 3 B 6 PHE A1105 TYR A1111 -1 O ASN A1109 N GLN A1098 SHEET 4 B 6 ASN A1145 ASN A1151 1 O ILE A1147 N TYR A1108 SHEET 5 B 6 ASP A1222 ASN A1227 -1 O PHE A1225 N ILE A1148 SHEET 6 B 6 TYR A1189 ASP A1191 -1 N VAL A1190 O VAL A1226 SHEET 1 C 2 TRP A1205 TRP A1206 0 SHEET 2 C 2 GLY A1218 TRP A1219 -1 O TRP A1219 N TRP A1205 SHEET 1 D 6 ARG B2057 THR B2061 0 SHEET 2 D 6 VAL B2071 THR B2075 -1 O THR B2075 N ARG B2057 SHEET 3 D 6 ILE B2033 GLN B2037 -1 N LEU B2034 O TYR B2074 SHEET 4 D 6 LEU B2004 ASN B2010 1 N ILE B2007 O CYS B2035 SHEET 5 D 6 ILE B2251 ILE B2255 -1 O LEU B2253 N ILE B2006 SHEET 6 D 6 ARG B2236 ILE B2239 -1 N ARG B2236 O GLU B2254 SHEET 1 E 6 SER B2081 ARG B2083 0 SHEET 2 E 6 ILE B2097 ASP B2101 -1 O ILE B2099 N ARG B2083 SHEET 3 E 6 LEU B2106 TYR B2111 -1 O LEU B2107 N ALA B2100 SHEET 4 E 6 VAL B2146 ASN B2151 1 O CYS B2149 N ILE B2110 SHEET 5 E 6 ASP B2222 ASN B2227 -1 O PHE B2225 N ILE B2148 SHEET 6 E 6 TYR B2189 ASP B2191 -1 N VAL B2190 O VAL B2226 LINK O ASP A1032 NA NA A7401 1555 1555 2.99 LINK OG1 THR A1075 NA NA A7401 1555 1555 3.28 LINK O3 GOL A7006 NA NA A7401 1555 1555 3.10 LINK NA NA A7401 O HOH A9008 1555 1555 2.82 SITE 1 AC1 5 VAL A1088 ALA A1131 GLU A1134 ARG B2090 SITE 2 AC1 5 HOH B9027 SITE 1 AC2 4 MET A1027 GLU A1054 GLY A1055 LYS A1076 SITE 1 AC3 5 LEU A1004 ILE A1033 VAL A1077 PHE A1102 SITE 2 AC3 5 NA A7401 SITE 1 AC4 4 LYS A1020 ASP A1242 MET A1244 HOH A9105 SITE 1 AC5 6 VAL A1176 ALA A1179 TRP A1180 LYS A1183 SITE 2 AC5 6 HOH A9199 HOH A9219 SITE 1 AC6 6 HOH A 459 LYS A1183 GLU A1186 ASN A1187 SITE 2 AC6 6 GLU B2054 HOH B9172 SITE 1 AC7 7 PRO A1043 GLU A1044 LEU A1046 ARG A1051 SITE 2 AC7 7 GLU B2228 GLU B2229 HOH B9174 SITE 1 AC8 6 GLY A1055 TYR A1056 ARG A1057 LYS A1076 SITE 2 AC8 6 ASP B2182 GLU B2186 SITE 1 AC9 2 ASP A1103 ASP A1104 SITE 1 BC1 6 ARG A1090 GLU A1120 LYS A1123 TYR A1124 SITE 2 BC1 6 GLU A1127 ARG B2138 SITE 1 BC2 7 HOH A 443 ILE A1185 TYR A1189 VAL A1190 SITE 2 BC2 7 ASP A1191 ARG A1194 HOH A9268 SITE 1 BC3 6 ASP A1032 THR A1075 LYS A1076 VAL A1077 SITE 2 BC3 6 GOL A7006 HOH A9008 SITE 1 BC4 4 GLU B2094 GLU B2120 ARG B2121 HOH B9353 SITE 1 BC5 9 GLY A1087 VAL A1088 GLU A1089 GLY B2087 SITE 2 BC5 9 VAL B2088 GLU B2089 ASP B2092 HOH B9144 SITE 3 BC5 9 HOH B9194 SITE 1 BC6 8 GLU B2158 ILE B2159 LEU B2161 PRO B2164 SITE 2 BC6 8 PRO B2200 HOH B9118 HOH B9167 HOH B9306 SITE 1 BC7 8 ASN B2114 LYS B2116 LYS B2125 ASN B2153 SITE 2 BC7 8 SER B2171 GLY B2172 LEU B2221 HOH B9222 SITE 1 BC8 4 PRO B2062 GLU B2084 HOH B9090 HOH B9109 SITE 1 BC9 4 SER B2168 ASN B2169 PRO B2175 HOH B9014 SITE 1 CC1 11 ASP B2191 THR B2192 PHE B2193 ARG B2220 SITE 2 CC1 11 ASP B2222 TYR B2223 PHE B2224 TRP B2238 SITE 3 CC1 11 ILE B2239 ILE B2251 HOH B9377 SITE 1 CC2 2 LEU B2082 ARG B2083 SITE 1 CC3 4 ASP B2104 LYS B2233 ILE B2255 GLU B2256 CRYST1 54.834 126.655 54.826 90.00 93.14 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018237 0.000000 0.001000 0.00000 SCALE2 0.000000 0.007895 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018267 0.00000