data_3GB0 # _entry.id 3GB0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GB0 pdb_00003gb0 10.2210/pdb3gb0/pdb RCSB RCSB051642 ? ? WWPDB D_1000051642 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 375071 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3GB0 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-02-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of aminopeptidase PepT (NP_980509.1) from Bacillus cereus ATCC 10987 at 2.04 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3GB0 _cell.length_a 141.311 _cell.length_b 58.147 _cell.length_c 51.368 _cell.angle_alpha 90.000 _cell.angle_beta 91.750 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GB0 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidase T' 40151.023 1 3.4.11.- ? ? ? 2 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 3 ? ? ? ? 4 water nat water 18.015 214 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)INQERLVNEF(MSE)ELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDT(MSE)AVTGHGAGNLICTLPATKD GVDTIYFTSH(MSE)DTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLAS(MSE)FEAIRVLKEKNIPHGTIEFIITVG EESGLVGAKALDRERITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAK(MSE)P LGRIDSETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEK(MSE)EAQVAK(MSE)KEAFETTAKE(MSE)GGHADVEV NV(MSE)YPGFKFADGDHVVEVAKRAAEKIGRTPSLHQSGGGSDANVIAGHGIPTVNLAVGYEEIHTTNEKIPVEELAKT AELVVAIIEEVAK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMINQERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMD TVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGEESGLVGAKALDRERITAKY GYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRIDSETTANIGRFEGGTQTNIV CDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEKIGRTPSLHQSG GGSDANVIAGHGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEEVAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 375071 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ILE n 1 4 ASN n 1 5 GLN n 1 6 GLU n 1 7 ARG n 1 8 LEU n 1 9 VAL n 1 10 ASN n 1 11 GLU n 1 12 PHE n 1 13 MSE n 1 14 GLU n 1 15 LEU n 1 16 VAL n 1 17 GLN n 1 18 VAL n 1 19 ASP n 1 20 SER n 1 21 GLU n 1 22 THR n 1 23 LYS n 1 24 PHE n 1 25 GLU n 1 26 ALA n 1 27 GLU n 1 28 ILE n 1 29 CYS n 1 30 LYS n 1 31 VAL n 1 32 LEU n 1 33 THR n 1 34 LYS n 1 35 LYS n 1 36 PHE n 1 37 THR n 1 38 ASP n 1 39 LEU n 1 40 GLY n 1 41 VAL n 1 42 GLU n 1 43 VAL n 1 44 PHE n 1 45 GLU n 1 46 ASP n 1 47 ASP n 1 48 THR n 1 49 MSE n 1 50 ALA n 1 51 VAL n 1 52 THR n 1 53 GLY n 1 54 HIS n 1 55 GLY n 1 56 ALA n 1 57 GLY n 1 58 ASN n 1 59 LEU n 1 60 ILE n 1 61 CYS n 1 62 THR n 1 63 LEU n 1 64 PRO n 1 65 ALA n 1 66 THR n 1 67 LYS n 1 68 ASP n 1 69 GLY n 1 70 VAL n 1 71 ASP n 1 72 THR n 1 73 ILE n 1 74 TYR n 1 75 PHE n 1 76 THR n 1 77 SER n 1 78 HIS n 1 79 MSE n 1 80 ASP n 1 81 THR n 1 82 VAL n 1 83 VAL n 1 84 PRO n 1 85 GLY n 1 86 ASN n 1 87 GLY n 1 88 ILE n 1 89 LYS n 1 90 PRO n 1 91 SER n 1 92 ILE n 1 93 LYS n 1 94 ASP n 1 95 GLY n 1 96 TYR n 1 97 ILE n 1 98 VAL n 1 99 SER n 1 100 ASP n 1 101 GLY n 1 102 THR n 1 103 THR n 1 104 ILE n 1 105 LEU n 1 106 GLY n 1 107 ALA n 1 108 ASP n 1 109 ASP n 1 110 LYS n 1 111 ALA n 1 112 GLY n 1 113 LEU n 1 114 ALA n 1 115 SER n 1 116 MSE n 1 117 PHE n 1 118 GLU n 1 119 ALA n 1 120 ILE n 1 121 ARG n 1 122 VAL n 1 123 LEU n 1 124 LYS n 1 125 GLU n 1 126 LYS n 1 127 ASN n 1 128 ILE n 1 129 PRO n 1 130 HIS n 1 131 GLY n 1 132 THR n 1 133 ILE n 1 134 GLU n 1 135 PHE n 1 136 ILE n 1 137 ILE n 1 138 THR n 1 139 VAL n 1 140 GLY n 1 141 GLU n 1 142 GLU n 1 143 SER n 1 144 GLY n 1 145 LEU n 1 146 VAL n 1 147 GLY n 1 148 ALA n 1 149 LYS n 1 150 ALA n 1 151 LEU n 1 152 ASP n 1 153 ARG n 1 154 GLU n 1 155 ARG n 1 156 ILE n 1 157 THR n 1 158 ALA n 1 159 LYS n 1 160 TYR n 1 161 GLY n 1 162 TYR n 1 163 ALA n 1 164 LEU n 1 165 ASP n 1 166 SER n 1 167 ASP n 1 168 GLY n 1 169 LYS n 1 170 VAL n 1 171 GLY n 1 172 GLU n 1 173 ILE n 1 174 VAL n 1 175 VAL n 1 176 ALA n 1 177 ALA n 1 178 PRO n 1 179 THR n 1 180 GLN n 1 181 ALA n 1 182 LYS n 1 183 VAL n 1 184 ASN n 1 185 ALA n 1 186 ILE n 1 187 ILE n 1 188 ARG n 1 189 GLY n 1 190 LYS n 1 191 THR n 1 192 ALA n 1 193 HIS n 1 194 ALA n 1 195 GLY n 1 196 VAL n 1 197 ALA n 1 198 PRO n 1 199 GLU n 1 200 LYS n 1 201 GLY n 1 202 VAL n 1 203 SER n 1 204 ALA n 1 205 ILE n 1 206 THR n 1 207 ILE n 1 208 ALA n 1 209 ALA n 1 210 LYS n 1 211 ALA n 1 212 ILE n 1 213 ALA n 1 214 LYS n 1 215 MSE n 1 216 PRO n 1 217 LEU n 1 218 GLY n 1 219 ARG n 1 220 ILE n 1 221 ASP n 1 222 SER n 1 223 GLU n 1 224 THR n 1 225 THR n 1 226 ALA n 1 227 ASN n 1 228 ILE n 1 229 GLY n 1 230 ARG n 1 231 PHE n 1 232 GLU n 1 233 GLY n 1 234 GLY n 1 235 THR n 1 236 GLN n 1 237 THR n 1 238 ASN n 1 239 ILE n 1 240 VAL n 1 241 CYS n 1 242 ASP n 1 243 HIS n 1 244 VAL n 1 245 GLN n 1 246 ILE n 1 247 PHE n 1 248 ALA n 1 249 GLU n 1 250 ALA n 1 251 ARG n 1 252 SER n 1 253 LEU n 1 254 ILE n 1 255 ASN n 1 256 GLU n 1 257 LYS n 1 258 MSE n 1 259 GLU n 1 260 ALA n 1 261 GLN n 1 262 VAL n 1 263 ALA n 1 264 LYS n 1 265 MSE n 1 266 LYS n 1 267 GLU n 1 268 ALA n 1 269 PHE n 1 270 GLU n 1 271 THR n 1 272 THR n 1 273 ALA n 1 274 LYS n 1 275 GLU n 1 276 MSE n 1 277 GLY n 1 278 GLY n 1 279 HIS n 1 280 ALA n 1 281 ASP n 1 282 VAL n 1 283 GLU n 1 284 VAL n 1 285 ASN n 1 286 VAL n 1 287 MSE n 1 288 TYR n 1 289 PRO n 1 290 GLY n 1 291 PHE n 1 292 LYS n 1 293 PHE n 1 294 ALA n 1 295 ASP n 1 296 GLY n 1 297 ASP n 1 298 HIS n 1 299 VAL n 1 300 VAL n 1 301 GLU n 1 302 VAL n 1 303 ALA n 1 304 LYS n 1 305 ARG n 1 306 ALA n 1 307 ALA n 1 308 GLU n 1 309 LYS n 1 310 ILE n 1 311 GLY n 1 312 ARG n 1 313 THR n 1 314 PRO n 1 315 SER n 1 316 LEU n 1 317 HIS n 1 318 GLN n 1 319 SER n 1 320 GLY n 1 321 GLY n 1 322 GLY n 1 323 SER n 1 324 ASP n 1 325 ALA n 1 326 ASN n 1 327 VAL n 1 328 ILE n 1 329 ALA n 1 330 GLY n 1 331 HIS n 1 332 GLY n 1 333 ILE n 1 334 PRO n 1 335 THR n 1 336 VAL n 1 337 ASN n 1 338 LEU n 1 339 ALA n 1 340 VAL n 1 341 GLY n 1 342 TYR n 1 343 GLU n 1 344 GLU n 1 345 ILE n 1 346 HIS n 1 347 THR n 1 348 THR n 1 349 ASN n 1 350 GLU n 1 351 LYS n 1 352 ILE n 1 353 PRO n 1 354 VAL n 1 355 GLU n 1 356 GLU n 1 357 LEU n 1 358 ALA n 1 359 LYS n 1 360 THR n 1 361 ALA n 1 362 GLU n 1 363 LEU n 1 364 VAL n 1 365 VAL n 1 366 ALA n 1 367 ILE n 1 368 ILE n 1 369 GLU n 1 370 GLU n 1 371 VAL n 1 372 ALA n 1 373 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCE_4216, NP_980509.1, pepT' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus ATCC 10987' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 222523 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 10987 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q731F0_BACC1 _struct_ref.pdbx_db_accession Q731F0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MINQERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDT VVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGEESGLVGAKALDRERITAKYG YALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRIDSETTANIGRFEGGTQTNIVC DHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEKIGRTPSLHQSGG GSDANVIAGHGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEEVAK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GB0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 373 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q731F0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 372 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 372 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3GB0 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q731F0 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3GB0 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'NANODROP, 10.0% Glycerol, 5.0% PEG 1000, 30.0% PEG 600, 0.1M MES pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-01-17 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97959 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list '0.91162, 0.97959' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3GB0 _reflns.d_resolution_high 2.04 _reflns.d_resolution_low 29.463 _reflns.number_obs 26596 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.percent_possible_obs 98.300 _reflns.B_iso_Wilson_estimate 25.025 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.04 2.11 9307 ? 4867 0.556 1.7 ? ? ? ? ? 96.20 1 1 2.11 2.20 10380 ? 5396 0.393 2.2 ? ? ? ? ? 98.40 2 1 2.20 2.30 9840 ? 5109 0.305 2.8 ? ? ? ? ? 98.40 3 1 2.30 2.42 9773 ? 5066 0.251 3.3 ? ? ? ? ? 98.80 4 1 2.42 2.57 9929 ? 5125 0.195 4.3 ? ? ? ? ? 98.80 5 1 2.57 2.77 10026 ? 5174 0.140 5.8 ? ? ? ? ? 98.70 6 1 2.77 3.04 9724 ? 4995 0.091 8.6 ? ? ? ? ? 98.80 7 1 3.04 3.48 10045 ? 5162 0.051 14.3 ? ? ? ? ? 98.60 8 1 3.48 4.38 10069 ? 5139 0.029 24.4 ? ? ? ? ? 98.40 9 1 4.38 29.463 10079 ? 5141 0.020 33.2 ? ? ? ? ? 97.50 10 1 # _refine.entry_id 3GB0 _refine.ls_d_res_high 2.040 _refine.ls_d_res_low 29.463 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.470 _refine.ls_number_reflns_obs 26590 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. GLYCEROL (GOL) AND POLYETHYLENE GLYCOL (PEG) FRAGMENTS FROM THE CRYSTALLIZATION CONDITION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. 5. RESIDUES ASP107-ASP108 FORM A CIS-PEPTIDE WHICH IS SUPPORTED BY ELECTRON DENSITY. THIS IS IN THE PUTATIVE ACTIVE SITE AND MAY BE FUNCTIONALLY RELEVANT INDICATING THE POSSIBILITY OF CARBOHYDRATE BINDING. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.171 _refine.ls_R_factor_R_work 0.169 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.212 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1340 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.603 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.650 _refine.aniso_B[2][2] 2.590 _refine.aniso_B[3][3] -1.020 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -1.280 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.169 _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.104 _refine.overall_SU_B 8.698 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 82.86 _refine.B_iso_min 12.27 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2761 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 3020 _refine_hist.d_res_high 2.040 _refine_hist.d_res_low 29.463 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2866 0.016 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1887 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3872 1.635 1.968 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4659 0.957 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 380 4.046 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 115 30.442 25.652 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 486 10.344 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 11 9.757 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 457 0.098 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 3205 0.006 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 514 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1854 1.765 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 776 0.513 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2990 2.774 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1012 5.531 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 879 7.882 11.000 ? ? # _refine_ls_shell.d_res_high 2.040 _refine_ls_shell.d_res_low 2.093 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.220 _refine_ls_shell.number_reflns_R_work 1833 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.R_factor_R_free 0.286 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1930 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GB0 _struct.title 'Crystal structure of aminopeptidase PepT (NP_980509.1) from Bacillus cereus ATCC 10987 at 2.04 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_980509.1, aminopeptidase PepT, Peptidase family M20/M25/M40, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Aminopeptidase, Hydrolase, Metal-binding ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3GB0 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THAT A DIMER IS THE STABLE OLIGOMERIC FORM IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 4 ? GLN A 17 ? ASN A 3 GLN A 16 1 ? 14 HELX_P HELX_P2 2 GLU A 25 ? LEU A 39 ? GLU A 24 LEU A 38 1 ? 15 HELX_P HELX_P3 3 THR A 48 ? GLY A 53 ? THR A 47 GLY A 52 1 ? 6 HELX_P HELX_P4 4 GLY A 106 ? LYS A 126 ? GLY A 105 LYS A 125 1 ? 21 HELX_P HELX_P5 5 GLY A 140 ? GLY A 144 ? GLY A 139 GLY A 143 5 ? 5 HELX_P HELX_P6 6 LEU A 145 ? LEU A 151 ? LEU A 144 LEU A 150 1 ? 7 HELX_P HELX_P7 7 ASP A 152 ? ILE A 156 ? ASP A 151 ILE A 155 5 ? 5 HELX_P HELX_P8 8 ALA A 197 ? GLY A 201 ? ALA A 196 GLY A 200 5 ? 5 HELX_P HELX_P9 9 SER A 203 ? ALA A 213 ? SER A 202 ALA A 212 1 ? 11 HELX_P HELX_P10 10 ILE A 254 ? MSE A 276 ? ILE A 253 MSE A 275 1 ? 23 HELX_P HELX_P11 11 ASP A 297 ? ILE A 310 ? ASP A 296 ILE A 309 1 ? 14 HELX_P HELX_P12 12 SER A 323 ? HIS A 331 ? SER A 322 HIS A 330 1 ? 9 HELX_P HELX_P13 13 VAL A 354 ? LYS A 373 ? VAL A 353 LYS A 372 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A ILE 3 N ? ? A MSE 1 A ILE 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A PHE 12 C ? ? ? 1_555 A MSE 13 N ? ? A PHE 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale4 covale both ? A MSE 13 C ? ? ? 1_555 A GLU 14 N ? ? A MSE 12 A GLU 13 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A THR 48 C ? ? ? 1_555 A MSE 49 N ? ? A THR 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A MSE 49 C ? ? ? 1_555 A ALA 50 N ? ? A MSE 48 A ALA 49 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A HIS 78 C ? ? ? 1_555 A MSE 79 N ? ? A HIS 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? A MSE 79 C ? ? ? 1_555 A ASP 80 N ? ? A MSE 78 A ASP 79 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale9 covale both ? A SER 115 C ? ? ? 1_555 A MSE 116 N ? ? A SER 114 A MSE 115 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale10 covale both ? A MSE 116 C ? ? ? 1_555 A PHE 117 N ? ? A MSE 115 A PHE 116 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale11 covale both ? A LYS 214 C ? ? ? 1_555 A MSE 215 N ? ? A LYS 213 A MSE 214 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale12 covale both ? A MSE 215 C ? ? ? 1_555 A PRO 216 N ? ? A MSE 214 A PRO 215 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale13 covale both ? A LYS 257 C ? ? ? 1_555 A MSE 258 N ? ? A LYS 256 A MSE 257 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale14 covale both ? A MSE 258 C ? ? ? 1_555 A GLU 259 N ? ? A MSE 257 A GLU 258 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale15 covale both ? A LYS 264 C ? ? ? 1_555 A MSE 265 N ? ? A LYS 263 A MSE 264 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale16 covale both ? A MSE 265 C ? ? ? 1_555 A LYS 266 N ? ? A MSE 264 A LYS 265 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale17 covale both ? A GLU 275 C ? ? ? 1_555 A MSE 276 N ? ? A GLU 274 A MSE 275 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale18 covale both ? A MSE 276 C ? ? ? 1_555 A GLY 277 N ? ? A MSE 275 A GLY 276 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale19 covale both ? A VAL 286 C ? ? ? 1_555 A MSE 287 N ? ? A VAL 285 A MSE 286 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale20 covale both ? A MSE 287 C ? ? ? 1_555 A TYR 288 N ? ? A MSE 286 A TYR 287 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 83 A . ? VAL 82 A PRO 84 A ? PRO 83 A 1 -0.50 2 ASP 108 A . ? ASP 107 A ASP 109 A ? ASP 108 A 1 7.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? C ? 3 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 42 ? GLU A 45 ? GLU A 41 GLU A 44 A 2 LEU A 59 ? LEU A 63 ? LEU A 58 LEU A 62 A 3 ILE A 133 ? THR A 138 ? ILE A 132 THR A 137 A 4 ILE A 73 ? HIS A 78 ? ILE A 72 HIS A 77 A 5 TYR A 160 ? SER A 166 ? TYR A 159 SER A 165 A 6 THR A 335 ? ALA A 339 ? THR A 334 ALA A 338 A 7 GLU A 172 ? ALA A 177 ? GLU A 171 ALA A 176 A 8 PHE A 291 ? LYS A 292 ? PHE A 290 LYS A 291 B 1 GLU A 42 ? GLU A 45 ? GLU A 41 GLU A 44 B 2 LEU A 59 ? LEU A 63 ? LEU A 58 LEU A 62 B 3 ILE A 133 ? THR A 138 ? ILE A 132 THR A 137 B 4 ILE A 73 ? HIS A 78 ? ILE A 72 HIS A 77 B 5 TYR A 160 ? SER A 166 ? TYR A 159 SER A 165 B 6 THR A 335 ? ALA A 339 ? THR A 334 ALA A 338 B 7 GLU A 172 ? ALA A 177 ? GLU A 171 ALA A 176 B 8 SER A 315 ? GLN A 318 ? SER A 314 GLN A 317 C 1 SER A 91 ? LYS A 93 ? SER A 90 LYS A 92 C 2 TYR A 96 ? VAL A 98 ? TYR A 95 VAL A 97 C 3 LYS A 351 ? PRO A 353 ? LYS A 350 PRO A 352 D 1 GLY A 218 ? ASP A 221 ? GLY A 217 ASP A 220 D 2 THR A 224 ? GLY A 233 ? THR A 223 GLY A 232 D 3 HIS A 243 ? SER A 252 ? HIS A 242 SER A 251 D 4 THR A 179 ? ARG A 188 ? THR A 178 ARG A 187 D 5 HIS A 279 ? TYR A 288 ? HIS A 278 TYR A 287 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 44 ? N PHE A 43 O ILE A 60 ? O ILE A 59 A 2 3 N CYS A 61 ? N CYS A 60 O PHE A 135 ? O PHE A 134 A 3 4 O ILE A 136 ? O ILE A 135 N PHE A 75 ? N PHE A 74 A 4 5 N THR A 76 ? N THR A 75 O LEU A 164 ? O LEU A 163 A 5 6 N ALA A 163 ? N ALA A 162 O LEU A 338 ? O LEU A 337 A 6 7 O ASN A 337 ? O ASN A 336 N VAL A 174 ? N VAL A 173 A 7 8 N ALA A 177 ? N ALA A 176 O PHE A 291 ? O PHE A 290 B 1 2 N PHE A 44 ? N PHE A 43 O ILE A 60 ? O ILE A 59 B 2 3 N CYS A 61 ? N CYS A 60 O PHE A 135 ? O PHE A 134 B 3 4 O ILE A 136 ? O ILE A 135 N PHE A 75 ? N PHE A 74 B 4 5 N THR A 76 ? N THR A 75 O LEU A 164 ? O LEU A 163 B 5 6 N ALA A 163 ? N ALA A 162 O LEU A 338 ? O LEU A 337 B 6 7 O ASN A 337 ? O ASN A 336 N VAL A 174 ? N VAL A 173 B 7 8 N ILE A 173 ? N ILE A 172 O SER A 315 ? O SER A 314 C 1 2 N SER A 91 ? N SER A 90 O VAL A 98 ? O VAL A 97 C 2 3 N ILE A 97 ? N ILE A 96 O ILE A 352 ? O ILE A 351 D 1 2 N GLY A 218 ? N GLY A 217 O ALA A 226 ? O ALA A 225 D 2 3 N GLU A 232 ? N GLU A 231 O GLN A 245 ? O GLN A 244 D 3 4 O SER A 252 ? O SER A 251 N THR A 179 ? N THR A 178 D 4 5 N ASN A 184 ? N ASN A 183 O GLU A 283 ? O GLU A 282 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 373 ? 7 'BINDING SITE FOR RESIDUE GOL A 373' AC2 Software A GOL 374 ? 9 'BINDING SITE FOR RESIDUE GOL A 374' AC3 Software A GOL 375 ? 8 'BINDING SITE FOR RESIDUE GOL A 375' AC4 Software A GOL 376 ? 5 'BINDING SITE FOR RESIDUE GOL A 376' AC5 Software A PEG 377 ? 4 'BINDING SITE FOR RESIDUE PEG A 377' AC6 Software A PEG 378 ? 4 'BINDING SITE FOR RESIDUE PEG A 378' AC7 Software A PEG 379 ? 3 'BINDING SITE FOR RESIDUE PEG A 379' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLN A 180 ? GLN A 179 . ? 1_555 ? 2 AC1 7 HIS A 193 ? HIS A 192 . ? 2_555 ? 3 AC1 7 ASN A 238 ? ASN A 237 . ? 2_555 ? 4 AC1 7 ARG A 251 ? ARG A 250 . ? 1_555 ? 5 AC1 7 TYR A 288 ? TYR A 287 . ? 1_555 ? 6 AC1 7 GLY A 322 ? GLY A 321 . ? 1_555 ? 7 AC1 7 HOH I . ? HOH A 438 . ? 1_555 ? 8 AC2 9 THR A 37 ? THR A 36 . ? 4_546 ? 9 AC2 9 VAL A 41 ? VAL A 40 . ? 4_546 ? 10 AC2 9 VAL A 43 ? VAL A 42 . ? 4_546 ? 11 AC2 9 PHE A 293 ? PHE A 292 . ? 1_555 ? 12 AC2 9 ALA A 329 ? ALA A 328 . ? 1_555 ? 13 AC2 9 ILE A 333 ? ILE A 332 . ? 1_555 ? 14 AC2 9 PRO A 334 ? PRO A 333 . ? 1_555 ? 15 AC2 9 GOL D . ? GOL A 375 . ? 1_555 ? 16 AC2 9 HOH I . ? HOH A 446 . ? 1_555 ? 17 AC3 8 GLY A 40 ? GLY A 39 . ? 4_546 ? 18 AC3 8 ASN A 255 ? ASN A 254 . ? 1_555 ? 19 AC3 8 GLY A 290 ? GLY A 289 . ? 1_555 ? 20 AC3 8 GOL C . ? GOL A 374 . ? 1_555 ? 21 AC3 8 HOH I . ? HOH A 396 . ? 4_546 ? 22 AC3 8 HOH I . ? HOH A 440 . ? 1_555 ? 23 AC3 8 HOH I . ? HOH A 460 . ? 1_555 ? 24 AC3 8 HOH I . ? HOH A 533 . ? 1_555 ? 25 AC4 5 ASP A 19 ? ASP A 18 . ? 1_555 ? 26 AC4 5 SER A 20 ? SER A 19 . ? 1_555 ? 27 AC4 5 GLU A 21 ? GLU A 20 . ? 1_555 ? 28 AC4 5 PHE A 24 ? PHE A 23 . ? 1_555 ? 29 AC4 5 ASN A 86 ? ASN A 85 . ? 1_555 ? 30 AC5 4 GLY A 195 ? GLY A 194 . ? 2_555 ? 31 AC5 4 VAL A 196 ? VAL A 195 . ? 2_555 ? 32 AC5 4 GLN A 318 ? GLN A 317 . ? 1_555 ? 33 AC5 4 SER A 319 ? SER A 318 . ? 1_555 ? 34 AC6 4 ASP A 38 ? ASP A 37 . ? 1_555 ? 35 AC6 4 ARG A 153 ? ARG A 152 . ? 4_556 ? 36 AC6 4 HIS A 331 ? HIS A 330 . ? 4_556 ? 37 AC6 4 HOH I . ? HOH A 471 . ? 4_556 ? 38 AC7 3 LYS A 93 ? LYS A 92 . ? 1_555 ? 39 AC7 3 TYR A 96 ? TYR A 95 . ? 1_555 ? 40 AC7 3 LYS A 351 ? LYS A 350 . ? 1_555 ? # _atom_sites.entry_id 3GB0 _atom_sites.fract_transf_matrix[1][1] 0.007077 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000216 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017198 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019476 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ILE 3 2 2 ILE ILE A . n A 1 4 ASN 4 3 3 ASN ASN A . n A 1 5 GLN 5 4 4 GLN GLN A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 ARG 7 6 6 ARG ARG A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 MSE 13 12 12 MSE MSE A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 VAL 16 15 15 VAL VAL A . n A 1 17 GLN 17 16 16 GLN GLN A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 THR 22 21 21 THR THR A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 PHE 24 23 23 PHE PHE A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 ILE 28 27 27 ILE ILE A . n A 1 29 CYS 29 28 28 CYS CYS A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 PHE 36 35 35 PHE PHE A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 ASP 38 37 37 ASP ASP A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 PHE 44 43 43 PHE PHE A . n A 1 45 GLU 45 44 44 GLU GLU A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 ASP 47 46 46 ASP ASP A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 MSE 49 48 48 MSE MSE A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 HIS 54 53 53 HIS HIS A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 CYS 61 60 60 CYS CYS A . n A 1 62 THR 62 61 61 THR THR A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 PRO 64 63 63 PRO PRO A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 TYR 74 73 73 TYR TYR A . n A 1 75 PHE 75 74 74 PHE PHE A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 SER 77 76 76 SER SER A . n A 1 78 HIS 78 77 77 HIS HIS A . n A 1 79 MSE 79 78 78 MSE MSE A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 PRO 84 83 83 PRO PRO A . n A 1 85 GLY 85 84 84 GLY GLY A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 ILE 88 87 87 ILE ILE A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 LYS 93 92 92 LYS LYS A . n A 1 94 ASP 94 93 93 ASP ASP A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 TYR 96 95 95 TYR TYR A . n A 1 97 ILE 97 96 96 ILE ILE A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 ILE 104 103 103 ILE ILE A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 ALA 107 106 106 ALA ALA A . n A 1 108 ASP 108 107 107 ASP ASP A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 LYS 110 109 109 LYS LYS A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 SER 115 114 114 SER SER A . n A 1 116 MSE 116 115 115 MSE MSE A . n A 1 117 PHE 117 116 116 PHE PHE A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 ALA 119 118 118 ALA ALA A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 GLU 125 124 124 GLU GLU A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 ASN 127 126 126 ASN ASN A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 HIS 130 129 129 HIS HIS A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 THR 132 131 131 THR THR A . n A 1 133 ILE 133 132 132 ILE ILE A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 PHE 135 134 134 PHE PHE A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 SER 143 142 142 SER SER A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 LYS 149 148 148 LYS LYS A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 ARG 153 152 152 ARG ARG A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 ARG 155 154 154 ARG ARG A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 LYS 159 158 158 LYS LYS A . n A 1 160 TYR 160 159 159 TYR TYR A . n A 1 161 GLY 161 160 160 GLY GLY A . n A 1 162 TYR 162 161 161 TYR TYR A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 ASP 165 164 164 ASP ASP A . n A 1 166 SER 166 165 165 SER SER A . n A 1 167 ASP 167 166 166 ASP ASP A . n A 1 168 GLY 168 167 167 GLY GLY A . n A 1 169 LYS 169 168 168 LYS LYS A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 GLU 172 171 171 GLU GLU A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 VAL 174 173 173 VAL VAL A . n A 1 175 VAL 175 174 174 VAL VAL A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 ALA 177 176 176 ALA ALA A . n A 1 178 PRO 178 177 177 PRO PRO A . n A 1 179 THR 179 178 178 THR THR A . n A 1 180 GLN 180 179 179 GLN GLN A . n A 1 181 ALA 181 180 180 ALA ALA A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 ASN 184 183 183 ASN ASN A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 ILE 186 185 185 ILE ILE A . n A 1 187 ILE 187 186 186 ILE ILE A . n A 1 188 ARG 188 187 187 ARG ARG A . n A 1 189 GLY 189 188 188 GLY GLY A . n A 1 190 LYS 190 189 189 LYS LYS A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 ALA 192 191 191 ALA ALA A . n A 1 193 HIS 193 192 192 HIS HIS A . n A 1 194 ALA 194 193 193 ALA ALA A . n A 1 195 GLY 195 194 194 GLY GLY A . n A 1 196 VAL 196 195 195 VAL VAL A . n A 1 197 ALA 197 196 196 ALA ALA A . n A 1 198 PRO 198 197 197 PRO PRO A . n A 1 199 GLU 199 198 198 GLU GLU A . n A 1 200 LYS 200 199 199 LYS LYS A . n A 1 201 GLY 201 200 200 GLY GLY A . n A 1 202 VAL 202 201 201 VAL VAL A . n A 1 203 SER 203 202 202 SER SER A . n A 1 204 ALA 204 203 203 ALA ALA A . n A 1 205 ILE 205 204 204 ILE ILE A . n A 1 206 THR 206 205 205 THR THR A . n A 1 207 ILE 207 206 206 ILE ILE A . n A 1 208 ALA 208 207 207 ALA ALA A . n A 1 209 ALA 209 208 208 ALA ALA A . n A 1 210 LYS 210 209 209 LYS LYS A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 ILE 212 211 211 ILE ILE A . n A 1 213 ALA 213 212 212 ALA ALA A . n A 1 214 LYS 214 213 213 LYS LYS A . n A 1 215 MSE 215 214 214 MSE MSE A . n A 1 216 PRO 216 215 215 PRO PRO A . n A 1 217 LEU 217 216 216 LEU LEU A . n A 1 218 GLY 218 217 217 GLY GLY A . n A 1 219 ARG 219 218 218 ARG ARG A . n A 1 220 ILE 220 219 219 ILE ILE A . n A 1 221 ASP 221 220 220 ASP ASP A . n A 1 222 SER 222 221 221 SER SER A . n A 1 223 GLU 223 222 222 GLU GLU A . n A 1 224 THR 224 223 223 THR THR A . n A 1 225 THR 225 224 224 THR THR A . n A 1 226 ALA 226 225 225 ALA ALA A . n A 1 227 ASN 227 226 226 ASN ASN A . n A 1 228 ILE 228 227 227 ILE ILE A . n A 1 229 GLY 229 228 228 GLY GLY A . n A 1 230 ARG 230 229 229 ARG ARG A . n A 1 231 PHE 231 230 230 PHE PHE A . n A 1 232 GLU 232 231 231 GLU GLU A . n A 1 233 GLY 233 232 232 GLY GLY A . n A 1 234 GLY 234 233 233 GLY GLY A . n A 1 235 THR 235 234 234 THR THR A . n A 1 236 GLN 236 235 235 GLN GLN A . n A 1 237 THR 237 236 236 THR THR A . n A 1 238 ASN 238 237 237 ASN ASN A . n A 1 239 ILE 239 238 238 ILE ILE A . n A 1 240 VAL 240 239 239 VAL VAL A . n A 1 241 CYS 241 240 240 CYS CYS A . n A 1 242 ASP 242 241 241 ASP ASP A . n A 1 243 HIS 243 242 242 HIS HIS A . n A 1 244 VAL 244 243 243 VAL VAL A . n A 1 245 GLN 245 244 244 GLN GLN A . n A 1 246 ILE 246 245 245 ILE ILE A . n A 1 247 PHE 247 246 246 PHE PHE A . n A 1 248 ALA 248 247 247 ALA ALA A . n A 1 249 GLU 249 248 248 GLU GLU A . n A 1 250 ALA 250 249 249 ALA ALA A . n A 1 251 ARG 251 250 250 ARG ARG A . n A 1 252 SER 252 251 251 SER SER A . n A 1 253 LEU 253 252 252 LEU LEU A . n A 1 254 ILE 254 253 253 ILE ILE A . n A 1 255 ASN 255 254 254 ASN ASN A . n A 1 256 GLU 256 255 255 GLU GLU A . n A 1 257 LYS 257 256 256 LYS LYS A . n A 1 258 MSE 258 257 257 MSE MSE A . n A 1 259 GLU 259 258 258 GLU GLU A . n A 1 260 ALA 260 259 259 ALA ALA A . n A 1 261 GLN 261 260 260 GLN GLN A . n A 1 262 VAL 262 261 261 VAL VAL A . n A 1 263 ALA 263 262 262 ALA ALA A . n A 1 264 LYS 264 263 263 LYS LYS A . n A 1 265 MSE 265 264 264 MSE MSE A . n A 1 266 LYS 266 265 265 LYS LYS A . n A 1 267 GLU 267 266 266 GLU GLU A . n A 1 268 ALA 268 267 267 ALA ALA A . n A 1 269 PHE 269 268 268 PHE PHE A . n A 1 270 GLU 270 269 269 GLU GLU A . n A 1 271 THR 271 270 270 THR THR A . n A 1 272 THR 272 271 271 THR THR A . n A 1 273 ALA 273 272 272 ALA ALA A . n A 1 274 LYS 274 273 273 LYS LYS A . n A 1 275 GLU 275 274 274 GLU GLU A . n A 1 276 MSE 276 275 275 MSE MSE A . n A 1 277 GLY 277 276 276 GLY GLY A . n A 1 278 GLY 278 277 277 GLY GLY A . n A 1 279 HIS 279 278 278 HIS HIS A . n A 1 280 ALA 280 279 279 ALA ALA A . n A 1 281 ASP 281 280 280 ASP ASP A . n A 1 282 VAL 282 281 281 VAL VAL A . n A 1 283 GLU 283 282 282 GLU GLU A . n A 1 284 VAL 284 283 283 VAL VAL A . n A 1 285 ASN 285 284 284 ASN ASN A . n A 1 286 VAL 286 285 285 VAL VAL A . n A 1 287 MSE 287 286 286 MSE MSE A . n A 1 288 TYR 288 287 287 TYR TYR A . n A 1 289 PRO 289 288 288 PRO PRO A . n A 1 290 GLY 290 289 289 GLY GLY A . n A 1 291 PHE 291 290 290 PHE PHE A . n A 1 292 LYS 292 291 291 LYS LYS A . n A 1 293 PHE 293 292 292 PHE PHE A . n A 1 294 ALA 294 293 293 ALA ALA A . n A 1 295 ASP 295 294 294 ASP ASP A . n A 1 296 GLY 296 295 295 GLY GLY A . n A 1 297 ASP 297 296 296 ASP ASP A . n A 1 298 HIS 298 297 297 HIS HIS A . n A 1 299 VAL 299 298 298 VAL VAL A . n A 1 300 VAL 300 299 299 VAL VAL A . n A 1 301 GLU 301 300 300 GLU GLU A . n A 1 302 VAL 302 301 301 VAL VAL A . n A 1 303 ALA 303 302 302 ALA ALA A . n A 1 304 LYS 304 303 303 LYS LYS A . n A 1 305 ARG 305 304 304 ARG ARG A . n A 1 306 ALA 306 305 305 ALA ALA A . n A 1 307 ALA 307 306 306 ALA ALA A . n A 1 308 GLU 308 307 307 GLU GLU A . n A 1 309 LYS 309 308 308 LYS LYS A . n A 1 310 ILE 310 309 309 ILE ILE A . n A 1 311 GLY 311 310 310 GLY GLY A . n A 1 312 ARG 312 311 311 ARG ARG A . n A 1 313 THR 313 312 312 THR THR A . n A 1 314 PRO 314 313 313 PRO PRO A . n A 1 315 SER 315 314 314 SER SER A . n A 1 316 LEU 316 315 315 LEU LEU A . n A 1 317 HIS 317 316 316 HIS HIS A . n A 1 318 GLN 318 317 317 GLN GLN A . n A 1 319 SER 319 318 318 SER SER A . n A 1 320 GLY 320 319 319 GLY GLY A . n A 1 321 GLY 321 320 320 GLY GLY A . n A 1 322 GLY 322 321 321 GLY GLY A . n A 1 323 SER 323 322 322 SER SER A . n A 1 324 ASP 324 323 323 ASP ASP A . n A 1 325 ALA 325 324 324 ALA ALA A . n A 1 326 ASN 326 325 325 ASN ASN A . n A 1 327 VAL 327 326 326 VAL VAL A . n A 1 328 ILE 328 327 327 ILE ILE A . n A 1 329 ALA 329 328 328 ALA ALA A . n A 1 330 GLY 330 329 329 GLY GLY A . n A 1 331 HIS 331 330 330 HIS HIS A . n A 1 332 GLY 332 331 331 GLY GLY A . n A 1 333 ILE 333 332 332 ILE ILE A . n A 1 334 PRO 334 333 333 PRO PRO A . n A 1 335 THR 335 334 334 THR THR A . n A 1 336 VAL 336 335 335 VAL VAL A . n A 1 337 ASN 337 336 336 ASN ASN A . n A 1 338 LEU 338 337 337 LEU LEU A . n A 1 339 ALA 339 338 338 ALA ALA A . n A 1 340 VAL 340 339 339 VAL VAL A . n A 1 341 GLY 341 340 340 GLY GLY A . n A 1 342 TYR 342 341 341 TYR TYR A . n A 1 343 GLU 343 342 342 GLU GLU A . n A 1 344 GLU 344 343 343 GLU GLU A . n A 1 345 ILE 345 344 344 ILE ILE A . n A 1 346 HIS 346 345 345 HIS HIS A . n A 1 347 THR 347 346 346 THR THR A . n A 1 348 THR 348 347 347 THR THR A . n A 1 349 ASN 349 348 348 ASN ASN A . n A 1 350 GLU 350 349 349 GLU GLU A . n A 1 351 LYS 351 350 350 LYS LYS A . n A 1 352 ILE 352 351 351 ILE ILE A . n A 1 353 PRO 353 352 352 PRO PRO A . n A 1 354 VAL 354 353 353 VAL VAL A . n A 1 355 GLU 355 354 354 GLU GLU A . n A 1 356 GLU 356 355 355 GLU GLU A . n A 1 357 LEU 357 356 356 LEU LEU A . n A 1 358 ALA 358 357 357 ALA ALA A . n A 1 359 LYS 359 358 358 LYS LYS A . n A 1 360 THR 360 359 359 THR THR A . n A 1 361 ALA 361 360 360 ALA ALA A . n A 1 362 GLU 362 361 361 GLU GLU A . n A 1 363 LEU 363 362 362 LEU LEU A . n A 1 364 VAL 364 363 363 VAL VAL A . n A 1 365 VAL 365 364 364 VAL VAL A . n A 1 366 ALA 366 365 365 ALA ALA A . n A 1 367 ILE 367 366 366 ILE ILE A . n A 1 368 ILE 368 367 367 ILE ILE A . n A 1 369 GLU 369 368 368 GLU GLU A . n A 1 370 GLU 370 369 369 GLU GLU A . n A 1 371 VAL 371 370 370 VAL VAL A . n A 1 372 ALA 372 371 371 ALA ALA A . n A 1 373 LYS 373 372 372 LYS LYS A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 373 1 GOL GOL A . C 2 GOL 1 374 2 GOL GOL A . D 2 GOL 1 375 3 GOL GOL A . E 2 GOL 1 376 4 GOL GOL A . F 3 PEG 1 377 5 PEG PEG A . G 3 PEG 1 378 6 PEG PEG A . H 3 PEG 1 379 7 PEG PEG A . I 4 HOH 1 380 8 HOH HOH A . I 4 HOH 2 381 9 HOH HOH A . I 4 HOH 3 382 10 HOH HOH A . I 4 HOH 4 383 11 HOH HOH A . I 4 HOH 5 384 12 HOH HOH A . I 4 HOH 6 385 13 HOH HOH A . I 4 HOH 7 386 14 HOH HOH A . I 4 HOH 8 387 15 HOH HOH A . I 4 HOH 9 388 16 HOH HOH A . I 4 HOH 10 389 17 HOH HOH A . I 4 HOH 11 390 18 HOH HOH A . I 4 HOH 12 391 19 HOH HOH A . I 4 HOH 13 392 20 HOH HOH A . I 4 HOH 14 393 21 HOH HOH A . I 4 HOH 15 394 22 HOH HOH A . I 4 HOH 16 395 23 HOH HOH A . I 4 HOH 17 396 24 HOH HOH A . I 4 HOH 18 397 25 HOH HOH A . I 4 HOH 19 398 26 HOH HOH A . I 4 HOH 20 399 27 HOH HOH A . I 4 HOH 21 400 28 HOH HOH A . I 4 HOH 22 401 29 HOH HOH A . I 4 HOH 23 402 30 HOH HOH A . I 4 HOH 24 403 31 HOH HOH A . I 4 HOH 25 404 32 HOH HOH A . I 4 HOH 26 405 33 HOH HOH A . I 4 HOH 27 406 34 HOH HOH A . I 4 HOH 28 407 35 HOH HOH A . I 4 HOH 29 408 36 HOH HOH A . I 4 HOH 30 409 37 HOH HOH A . I 4 HOH 31 410 38 HOH HOH A . I 4 HOH 32 411 39 HOH HOH A . I 4 HOH 33 412 40 HOH HOH A . I 4 HOH 34 413 41 HOH HOH A . I 4 HOH 35 414 42 HOH HOH A . I 4 HOH 36 415 43 HOH HOH A . I 4 HOH 37 416 44 HOH HOH A . I 4 HOH 38 417 45 HOH HOH A . I 4 HOH 39 418 46 HOH HOH A . I 4 HOH 40 419 47 HOH HOH A . I 4 HOH 41 420 48 HOH HOH A . I 4 HOH 42 421 49 HOH HOH A . I 4 HOH 43 422 50 HOH HOH A . I 4 HOH 44 423 51 HOH HOH A . I 4 HOH 45 424 52 HOH HOH A . I 4 HOH 46 425 53 HOH HOH A . I 4 HOH 47 426 54 HOH HOH A . I 4 HOH 48 427 55 HOH HOH A . I 4 HOH 49 428 56 HOH HOH A . I 4 HOH 50 429 57 HOH HOH A . I 4 HOH 51 430 58 HOH HOH A . I 4 HOH 52 431 59 HOH HOH A . I 4 HOH 53 432 60 HOH HOH A . I 4 HOH 54 433 61 HOH HOH A . I 4 HOH 55 434 62 HOH HOH A . I 4 HOH 56 435 63 HOH HOH A . I 4 HOH 57 436 64 HOH HOH A . I 4 HOH 58 437 65 HOH HOH A . I 4 HOH 59 438 66 HOH HOH A . I 4 HOH 60 439 67 HOH HOH A . I 4 HOH 61 440 68 HOH HOH A . I 4 HOH 62 441 69 HOH HOH A . I 4 HOH 63 442 70 HOH HOH A . I 4 HOH 64 443 71 HOH HOH A . I 4 HOH 65 444 72 HOH HOH A . I 4 HOH 66 445 73 HOH HOH A . I 4 HOH 67 446 74 HOH HOH A . I 4 HOH 68 447 75 HOH HOH A . I 4 HOH 69 448 76 HOH HOH A . I 4 HOH 70 449 77 HOH HOH A . I 4 HOH 71 450 78 HOH HOH A . I 4 HOH 72 451 79 HOH HOH A . I 4 HOH 73 452 80 HOH HOH A . I 4 HOH 74 453 81 HOH HOH A . I 4 HOH 75 454 82 HOH HOH A . I 4 HOH 76 455 83 HOH HOH A . I 4 HOH 77 456 84 HOH HOH A . I 4 HOH 78 457 85 HOH HOH A . I 4 HOH 79 458 86 HOH HOH A . I 4 HOH 80 459 87 HOH HOH A . I 4 HOH 81 460 88 HOH HOH A . I 4 HOH 82 461 89 HOH HOH A . I 4 HOH 83 462 90 HOH HOH A . I 4 HOH 84 463 91 HOH HOH A . I 4 HOH 85 464 92 HOH HOH A . I 4 HOH 86 465 93 HOH HOH A . I 4 HOH 87 466 94 HOH HOH A . I 4 HOH 88 467 95 HOH HOH A . I 4 HOH 89 468 96 HOH HOH A . I 4 HOH 90 469 97 HOH HOH A . I 4 HOH 91 470 98 HOH HOH A . I 4 HOH 92 471 99 HOH HOH A . I 4 HOH 93 472 100 HOH HOH A . I 4 HOH 94 473 101 HOH HOH A . I 4 HOH 95 474 102 HOH HOH A . I 4 HOH 96 475 103 HOH HOH A . I 4 HOH 97 476 104 HOH HOH A . I 4 HOH 98 477 105 HOH HOH A . I 4 HOH 99 478 106 HOH HOH A . I 4 HOH 100 479 107 HOH HOH A . I 4 HOH 101 480 108 HOH HOH A . I 4 HOH 102 481 109 HOH HOH A . I 4 HOH 103 482 110 HOH HOH A . I 4 HOH 104 483 111 HOH HOH A . I 4 HOH 105 484 112 HOH HOH A . I 4 HOH 106 485 113 HOH HOH A . I 4 HOH 107 486 114 HOH HOH A . I 4 HOH 108 487 115 HOH HOH A . I 4 HOH 109 488 116 HOH HOH A . I 4 HOH 110 489 117 HOH HOH A . I 4 HOH 111 490 118 HOH HOH A . I 4 HOH 112 491 119 HOH HOH A . I 4 HOH 113 492 120 HOH HOH A . I 4 HOH 114 493 121 HOH HOH A . I 4 HOH 115 494 122 HOH HOH A . I 4 HOH 116 495 123 HOH HOH A . I 4 HOH 117 496 124 HOH HOH A . I 4 HOH 118 497 125 HOH HOH A . I 4 HOH 119 498 126 HOH HOH A . I 4 HOH 120 499 127 HOH HOH A . I 4 HOH 121 500 128 HOH HOH A . I 4 HOH 122 501 129 HOH HOH A . I 4 HOH 123 502 130 HOH HOH A . I 4 HOH 124 503 131 HOH HOH A . I 4 HOH 125 504 132 HOH HOH A . I 4 HOH 126 505 133 HOH HOH A . I 4 HOH 127 506 134 HOH HOH A . I 4 HOH 128 507 135 HOH HOH A . I 4 HOH 129 508 136 HOH HOH A . I 4 HOH 130 509 137 HOH HOH A . I 4 HOH 131 510 138 HOH HOH A . I 4 HOH 132 511 139 HOH HOH A . I 4 HOH 133 512 140 HOH HOH A . I 4 HOH 134 513 141 HOH HOH A . I 4 HOH 135 514 142 HOH HOH A . I 4 HOH 136 515 143 HOH HOH A . I 4 HOH 137 516 144 HOH HOH A . I 4 HOH 138 517 145 HOH HOH A . I 4 HOH 139 518 146 HOH HOH A . I 4 HOH 140 519 147 HOH HOH A . I 4 HOH 141 520 148 HOH HOH A . I 4 HOH 142 521 149 HOH HOH A . I 4 HOH 143 522 150 HOH HOH A . I 4 HOH 144 523 151 HOH HOH A . I 4 HOH 145 524 152 HOH HOH A . I 4 HOH 146 525 153 HOH HOH A . I 4 HOH 147 526 154 HOH HOH A . I 4 HOH 148 527 155 HOH HOH A . I 4 HOH 149 528 156 HOH HOH A . I 4 HOH 150 529 157 HOH HOH A . I 4 HOH 151 530 158 HOH HOH A . I 4 HOH 152 531 159 HOH HOH A . I 4 HOH 153 532 160 HOH HOH A . I 4 HOH 154 533 161 HOH HOH A . I 4 HOH 155 534 162 HOH HOH A . I 4 HOH 156 535 163 HOH HOH A . I 4 HOH 157 536 164 HOH HOH A . I 4 HOH 158 537 165 HOH HOH A . I 4 HOH 159 538 166 HOH HOH A . I 4 HOH 160 539 167 HOH HOH A . I 4 HOH 161 540 168 HOH HOH A . I 4 HOH 162 541 169 HOH HOH A . I 4 HOH 163 542 170 HOH HOH A . I 4 HOH 164 543 171 HOH HOH A . I 4 HOH 165 544 172 HOH HOH A . I 4 HOH 166 545 173 HOH HOH A . I 4 HOH 167 546 174 HOH HOH A . I 4 HOH 168 547 175 HOH HOH A . I 4 HOH 169 548 176 HOH HOH A . I 4 HOH 170 549 177 HOH HOH A . I 4 HOH 171 550 178 HOH HOH A . I 4 HOH 172 551 179 HOH HOH A . I 4 HOH 173 552 180 HOH HOH A . I 4 HOH 174 553 181 HOH HOH A . I 4 HOH 175 554 182 HOH HOH A . I 4 HOH 176 555 183 HOH HOH A . I 4 HOH 177 556 184 HOH HOH A . I 4 HOH 178 557 185 HOH HOH A . I 4 HOH 179 558 186 HOH HOH A . I 4 HOH 180 559 187 HOH HOH A . I 4 HOH 181 560 188 HOH HOH A . I 4 HOH 182 561 189 HOH HOH A . I 4 HOH 183 562 190 HOH HOH A . I 4 HOH 184 563 191 HOH HOH A . I 4 HOH 185 564 192 HOH HOH A . I 4 HOH 186 565 193 HOH HOH A . I 4 HOH 187 566 194 HOH HOH A . I 4 HOH 188 567 195 HOH HOH A . I 4 HOH 189 568 196 HOH HOH A . I 4 HOH 190 569 197 HOH HOH A . I 4 HOH 191 570 198 HOH HOH A . I 4 HOH 192 571 199 HOH HOH A . I 4 HOH 193 572 200 HOH HOH A . I 4 HOH 194 573 201 HOH HOH A . I 4 HOH 195 574 202 HOH HOH A . I 4 HOH 196 575 203 HOH HOH A . I 4 HOH 197 576 204 HOH HOH A . I 4 HOH 198 577 205 HOH HOH A . I 4 HOH 199 578 206 HOH HOH A . I 4 HOH 200 579 207 HOH HOH A . I 4 HOH 201 580 208 HOH HOH A . I 4 HOH 202 581 209 HOH HOH A . I 4 HOH 203 582 210 HOH HOH A . I 4 HOH 204 583 211 HOH HOH A . I 4 HOH 205 584 212 HOH HOH A . I 4 HOH 206 585 213 HOH HOH A . I 4 HOH 207 586 214 HOH HOH A . I 4 HOH 208 587 215 HOH HOH A . I 4 HOH 209 588 216 HOH HOH A . I 4 HOH 210 589 217 HOH HOH A . I 4 HOH 211 590 218 HOH HOH A . I 4 HOH 212 591 219 HOH HOH A . I 4 HOH 213 592 220 HOH HOH A . I 4 HOH 214 593 221 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 13 A MSE 12 ? MET SELENOMETHIONINE 3 A MSE 49 A MSE 48 ? MET SELENOMETHIONINE 4 A MSE 79 A MSE 78 ? MET SELENOMETHIONINE 5 A MSE 116 A MSE 115 ? MET SELENOMETHIONINE 6 A MSE 215 A MSE 214 ? MET SELENOMETHIONINE 7 A MSE 258 A MSE 257 ? MET SELENOMETHIONINE 8 A MSE 265 A MSE 264 ? MET SELENOMETHIONINE 9 A MSE 276 A MSE 275 ? MET SELENOMETHIONINE 10 A MSE 287 A MSE 286 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2880 ? 1 MORE -8.5 ? 1 'SSA (A^2)' 27910 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 19.5085 _pdbx_refine_tls.origin_y 47.4294 _pdbx_refine_tls.origin_z 22.1964 _pdbx_refine_tls.T[1][1] 0.0065 _pdbx_refine_tls.T[2][2] 0.0108 _pdbx_refine_tls.T[3][3] 0.0178 _pdbx_refine_tls.T[1][2] 0.0005 _pdbx_refine_tls.T[1][3] 0.0069 _pdbx_refine_tls.T[2][3] 0.0054 _pdbx_refine_tls.L[1][1] 0.4776 _pdbx_refine_tls.L[2][2] 0.1956 _pdbx_refine_tls.L[3][3] 0.4460 _pdbx_refine_tls.L[1][2] 0.1350 _pdbx_refine_tls.L[1][3] 0.2214 _pdbx_refine_tls.L[2][3] 0.0577 _pdbx_refine_tls.S[1][1] 0.0123 _pdbx_refine_tls.S[2][2] -0.0115 _pdbx_refine_tls.S[3][3] -0.0008 _pdbx_refine_tls.S[1][2] -0.0066 _pdbx_refine_tls.S[1][3] 0.0450 _pdbx_refine_tls.S[2][3] 0.0073 _pdbx_refine_tls.S[2][1] 0.0227 _pdbx_refine_tls.S[3][1] -0.0201 _pdbx_refine_tls.S[3][2] 0.0031 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 372 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_entry_details.entry_id 3GB0 _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 19 ? ? -146.12 55.68 2 1 LYS A 22 ? ? 91.38 -18.94 3 1 PHE A 23 ? ? -119.12 50.12 4 1 ASP A 46 ? ? -109.55 41.80 5 1 LEU A 163 ? ? -111.63 67.59 6 1 ASP A 164 ? ? -157.89 56.90 7 1 VAL A 195 ? ? -90.08 -67.41 8 1 THR A 234 ? ? -120.65 -64.92 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 22 ? CE ? A LYS 23 CE 2 1 Y 1 A LYS 22 ? NZ ? A LYS 23 NZ 3 1 Y 1 A LYS 88 ? CD ? A LYS 89 CD 4 1 Y 1 A LYS 88 ? CE ? A LYS 89 CE 5 1 Y 1 A LYS 88 ? NZ ? A LYS 89 NZ 6 1 Y 1 A LYS 92 ? CD ? A LYS 93 CD 7 1 Y 1 A LYS 92 ? CE ? A LYS 93 CE 8 1 Y 1 A LYS 92 ? NZ ? A LYS 93 NZ 9 1 Y 1 A LYS 189 ? CD ? A LYS 190 CD 10 1 Y 1 A LYS 189 ? CE ? A LYS 190 CE 11 1 Y 1 A LYS 189 ? NZ ? A LYS 190 NZ 12 1 Y 1 A LYS 199 ? CE ? A LYS 200 CE 13 1 Y 1 A LYS 199 ? NZ ? A LYS 200 NZ 14 1 Y 1 A LYS 273 ? CD ? A LYS 274 CD 15 1 Y 1 A LYS 273 ? CE ? A LYS 274 CE 16 1 Y 1 A LYS 273 ? NZ ? A LYS 274 NZ 17 1 Y 1 A LYS 308 ? NZ ? A LYS 309 NZ 18 1 Y 1 A LYS 372 ? CE ? A LYS 373 CE 19 1 Y 1 A LYS 372 ? NZ ? A LYS 373 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'DI(HYDROXYETHYL)ETHER' PEG 4 water HOH #