data_3GFA # _entry.id 3GFA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GFA pdb_00003gfa 10.2210/pdb3gfa/pdb RCSB RCSB051786 ? ? WWPDB D_1000051786 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 391649 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3GFA _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-02-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of putative nitroreductase in complex with FMN (YP_001089721.1) from CLOSTRIDIUM DIFFICILE 630 at 1.35 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3GFA _cell.length_a 73.336 _cell.length_b 109.891 _cell.length_c 60.635 _cell.angle_alpha 90.00 _cell.angle_beta 104.84 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GFA _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative nitroreductase' 22773.963 2 ? ? ? ? 2 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 5 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 6 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 7 water nat water 18.015 347 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)ISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKES(MSE)LKA(MSE)SKGIQN EINDNGLLPGSRQHIAGANYTVEI(MSE)KQAPVTIFILNILGKSPLEKLSPEERFYE(MSE)AN(MSE)QSIGAAIQN (MSE)SLTAVELGLGSLWICDVYFAYRELCEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR ; _entity_poly.pdbx_seq_one_letter_code_can ;GMISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSR QHIAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYREL CEWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 391649 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ILE n 1 4 SER n 1 5 ASP n 1 6 SER n 1 7 ILE n 1 8 SER n 1 9 LYS n 1 10 ARG n 1 11 ARG n 1 12 SER n 1 13 ILE n 1 14 ARG n 1 15 LYS n 1 16 TYR n 1 17 LYS n 1 18 ASN n 1 19 GLN n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 HIS n 1 24 GLU n 1 25 THR n 1 26 ILE n 1 27 GLU n 1 28 LYS n 1 29 ILE n 1 30 ILE n 1 31 GLU n 1 32 ALA n 1 33 GLY n 1 34 ILE n 1 35 ASN n 1 36 ALA n 1 37 PRO n 1 38 SER n 1 39 SER n 1 40 LYS n 1 41 ASN n 1 42 ARG n 1 43 GLN n 1 44 PRO n 1 45 TRP n 1 46 ARG n 1 47 PHE n 1 48 VAL n 1 49 VAL n 1 50 ILE n 1 51 THR n 1 52 GLU n 1 53 LYS n 1 54 GLU n 1 55 LYS n 1 56 GLU n 1 57 SER n 1 58 MSE n 1 59 LEU n 1 60 LYS n 1 61 ALA n 1 62 MSE n 1 63 SER n 1 64 LYS n 1 65 GLY n 1 66 ILE n 1 67 GLN n 1 68 ASN n 1 69 GLU n 1 70 ILE n 1 71 ASN n 1 72 ASP n 1 73 ASN n 1 74 GLY n 1 75 LEU n 1 76 LEU n 1 77 PRO n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 GLN n 1 82 HIS n 1 83 ILE n 1 84 ALA n 1 85 GLY n 1 86 ALA n 1 87 ASN n 1 88 TYR n 1 89 THR n 1 90 VAL n 1 91 GLU n 1 92 ILE n 1 93 MSE n 1 94 LYS n 1 95 GLN n 1 96 ALA n 1 97 PRO n 1 98 VAL n 1 99 THR n 1 100 ILE n 1 101 PHE n 1 102 ILE n 1 103 LEU n 1 104 ASN n 1 105 ILE n 1 106 LEU n 1 107 GLY n 1 108 LYS n 1 109 SER n 1 110 PRO n 1 111 LEU n 1 112 GLU n 1 113 LYS n 1 114 LEU n 1 115 SER n 1 116 PRO n 1 117 GLU n 1 118 GLU n 1 119 ARG n 1 120 PHE n 1 121 TYR n 1 122 GLU n 1 123 MSE n 1 124 ALA n 1 125 ASN n 1 126 MSE n 1 127 GLN n 1 128 SER n 1 129 ILE n 1 130 GLY n 1 131 ALA n 1 132 ALA n 1 133 ILE n 1 134 GLN n 1 135 ASN n 1 136 MSE n 1 137 SER n 1 138 LEU n 1 139 THR n 1 140 ALA n 1 141 VAL n 1 142 GLU n 1 143 LEU n 1 144 GLY n 1 145 LEU n 1 146 GLY n 1 147 SER n 1 148 LEU n 1 149 TRP n 1 150 ILE n 1 151 CYS n 1 152 ASP n 1 153 VAL n 1 154 TYR n 1 155 PHE n 1 156 ALA n 1 157 TYR n 1 158 ARG n 1 159 GLU n 1 160 LEU n 1 161 CYS n 1 162 GLU n 1 163 TRP n 1 164 LEU n 1 165 ASN n 1 166 THR n 1 167 ASP n 1 168 SER n 1 169 GLN n 1 170 LEU n 1 171 VAL n 1 172 ALA n 1 173 ALA n 1 174 ILE n 1 175 SER n 1 176 LEU n 1 177 GLY n 1 178 TYR n 1 179 PRO n 1 180 ASP n 1 181 GLU n 1 182 GLU n 1 183 PRO n 1 184 SER n 1 185 ARG n 1 186 ARG n 1 187 PRO n 1 188 ARG n 1 189 LEU n 1 190 GLN n 1 191 LEU n 1 192 SER n 1 193 ASP n 1 194 VAL n 1 195 THR n 1 196 GLU n 1 197 TRP n 1 198 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CD3205, YP_001089721.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium difficile 630' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272563 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q17ZU8_CLOD6 _struct_ref.pdbx_db_accession Q17ZU8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQ HIAGANYTVEIMKQAPVTIFILNILGKSPLEKLSPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELC EWLNTDSQLVAAISLGYPDEEPSRRPRLQLSDVTEWR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GFA A 2 ? 198 ? Q17ZU8 1 ? 197 ? 1 197 2 1 3GFA B 2 ? 198 ? Q17ZU8 1 ? 197 ? 1 197 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GFA GLY A 1 ? UNP Q17ZU8 ? ? 'expression tag' 0 1 2 3GFA GLY B 1 ? UNP Q17ZU8 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3GFA # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 3.7 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '43.1000% 2-methyl-2,4-pentanediol, 0.1M phosphate-citrate pH 3.7, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-11-14 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97831 1.0 3 0.97870 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91162,0.97831,0.97870 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3GFA _reflns.d_resolution_high 1.35 _reflns.d_resolution_low 29.988 _reflns.number_obs 99649 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_netI_over_sigmaI 3.938 _reflns.pdbx_Rsym_value 0.082 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 98.200 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 14.166 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.35 1.39 ? 18207 ? 0.496 1.5 0.496 ? 3.00 ? 6124 81.90 1 1 1.39 1.42 ? 23211 ? 0.450 1.7 0.450 ? 3.40 ? 6827 94.00 2 1 1.42 1.46 ? 26606 ? 0.389 1.9 0.389 ? 3.70 ? 7132 100.00 3 1 1.46 1.51 ? 25855 ? 0.291 2.6 0.291 ? 3.70 ? 6896 100.00 4 1 1.51 1.56 ? 25103 ? 0.235 3.1 0.235 ? 3.80 ? 6688 100.00 5 1 1.56 1.61 ? 24259 ? 0.204 3.6 0.204 ? 3.80 ? 6459 100.00 6 1 1.61 1.67 ? 23581 ? 0.174 4.1 0.174 ? 3.80 ? 6237 100.00 7 1 1.67 1.74 ? 22837 ? 0.150 4.6 0.150 ? 3.80 ? 6044 100.00 8 1 1.74 1.82 ? 21681 ? 0.128 5.3 0.128 ? 3.80 ? 5719 100.00 9 1 1.82 1.91 ? 20846 ? 0.111 5.8 0.111 ? 3.80 ? 5505 100.00 10 1 1.91 2.01 ? 19888 ? 0.096 6.3 0.096 ? 3.80 ? 5249 100.00 11 1 2.01 2.13 ? 18854 ? 0.084 7.2 0.084 ? 3.80 ? 4967 100.00 12 1 2.13 2.28 ? 17732 ? 0.081 7.2 0.081 ? 3.80 ? 4691 100.00 13 1 2.28 2.46 ? 16157 ? 0.079 7.6 0.079 ? 3.70 ? 4318 100.00 14 1 2.46 2.70 ? 14887 ? 0.075 7.4 0.075 ? 3.70 ? 3977 100.00 15 1 2.70 3.02 ? 13670 ? 0.069 8.5 0.069 ? 3.80 ? 3643 100.00 16 1 3.02 3.49 ? 12086 ? 0.065 8.4 0.065 ? 3.80 ? 3203 100.00 17 1 3.49 4.27 ? 10119 ? 0.064 8.4 0.064 ? 3.80 ? 2697 100.00 18 1 4.27 6.04 ? 7838 ? 0.066 8.0 0.066 ? 3.70 ? 2118 100.00 19 1 6.04 29.99 ? 4089 ? 0.066 8.2 0.066 ? 3.50 ? 1155 99.20 20 1 # _refine.entry_id 3GFA _refine.ls_d_res_high 1.350 _refine.ls_d_res_low 29.988 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.220 _refine.ls_number_reflns_obs 99648 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. A FLAVIN MONONUCLEOTIDE (FMN) AND A CHLORIDE ION IS BOUND TO EACH OF THE TWO ACTIVE SITES WITHIN THE DIMER. 5.(4S)-2-METHYL-2,4-PENTANEDIOL (MPD) AND GLYCEROL FROM THE CRYSTALLIZATION/CRYOPROTECTANT SOLUTIONS ARE MODELED INTO THE STRUCTURE. 6. A MODIFIED FMN RESTRAINTS DICTIONARY WAS USED DURING THE REFINEMENT TO ALLOW BENDING OF THE FMN RING ALONG THE N5-N10 VIRTUAL AXIS. THIS RESULTS IN AN IMPROVED FIT BETWEEN THE FMN COORDINATE MODEL AND ELECTRON DENSITY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.135 _refine.ls_R_factor_R_work 0.134 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.157 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 4983 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 18.461 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.400 _refine.aniso_B[2][2] -0.380 _refine.aniso_B[3][3] 0.290 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.960 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.973 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.047 _refine.pdbx_overall_ESU_R_Free 0.044 _refine.overall_SU_ML 0.028 _refine.overall_SU_B 1.593 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 73.03 _refine.B_iso_min 6.86 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3077 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 98 _refine_hist.number_atoms_solvent 347 _refine_hist.number_atoms_total 3522 _refine_hist.d_res_high 1.350 _refine_hist.d_res_low 29.988 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 3627 0.015 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 2504 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 5001 1.504 1.997 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 6193 0.941 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 494 5.547 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 170 35.420 24.765 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 670 12.780 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 26 13.771 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 547 0.086 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 4085 0.008 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 689 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 792 0.223 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 2835 0.201 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1754 0.185 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1944 0.089 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 276 0.150 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 29 0.267 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 86 0.225 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 33 0.205 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 2222 1.932 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 847 1.026 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 3550 2.610 3.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1623 2.093 2.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 1398 2.876 3.000 ? ? r_rigid_bond_restr 'X-RAY DIFFRACTION' 6794 1.335 3.000 ? ? r_sphericity_free 'X-RAY DIFFRACTION' 351 7.409 3.000 ? ? r_sphericity_bonded 'X-RAY DIFFRACTION' 6012 3.701 3.000 ? ? # _refine_ls_shell.d_res_high 1.350 _refine_ls_shell.d_res_low 1.385 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 81.830 _refine_ls_shell.number_reflns_R_work 5838 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.258 _refine_ls_shell.R_factor_R_free 0.259 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 283 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 6121 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GFA _struct.title 'Crystal structure of a putative nitroreductase in complex with fmn (cd3205) from clostridium difficile 630 at 1.35 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3GFA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 2 ? I N N 3 ? J N N 5 ? K N N 6 ? L N N 7 ? M N N 7 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MSE A 2 ? ARG A 10 ? MSE A 1 ARG A 9 1 ? 9 HELX_P HELX_P2 2 SER A 22 ? ASN A 35 ? SER A 21 ASN A 34 1 ? 14 HELX_P HELX_P3 3 SER A 38 ? ARG A 42 ? SER A 37 ARG A 41 5 ? 5 HELX_P HELX_P4 4 GLU A 54 ? ASN A 71 ? GLU A 53 ASN A 70 1 ? 18 HELX_P HELX_P5 5 LEU A 76 ? GLN A 81 ? LEU A 75 GLN A 80 5 ? 6 HELX_P HELX_P6 6 HIS A 82 ? ALA A 96 ? HIS A 81 ALA A 95 1 ? 15 HELX_P HELX_P7 7 SER A 115 ? LEU A 143 ? SER A 114 LEU A 142 1 ? 29 HELX_P HELX_P8 8 CYS A 151 ? PHE A 155 ? CYS A 150 PHE A 154 5 ? 5 HELX_P HELX_P9 9 ALA A 156 ? ASN A 165 ? ALA A 155 ASN A 164 1 ? 10 HELX_P HELX_P10 10 GLN A 190 ? VAL A 194 ? GLN A 189 VAL A 193 1 ? 5 HELX_P HELX_P11 11 ILE B 3 ? ARG B 10 ? ILE B 2 ARG B 9 1 ? 8 HELX_P HELX_P12 12 SER B 22 ? ASN B 35 ? SER B 21 ASN B 34 1 ? 14 HELX_P HELX_P13 13 SER B 38 ? ARG B 42 ? SER B 37 ARG B 41 5 ? 5 HELX_P HELX_P14 14 THR B 51 ? ASN B 71 ? THR B 50 ASN B 70 1 ? 21 HELX_P HELX_P15 15 LEU B 76 ? GLN B 81 ? LEU B 75 GLN B 80 5 ? 6 HELX_P HELX_P16 16 HIS B 82 ? ALA B 96 ? HIS B 81 ALA B 95 1 ? 15 HELX_P HELX_P17 17 SER B 115 ? LEU B 143 ? SER B 114 LEU B 142 1 ? 29 HELX_P HELX_P18 18 CYS B 151 ? PHE B 155 ? CYS B 150 PHE B 154 5 ? 5 HELX_P HELX_P19 19 ALA B 156 ? ASN B 165 ? ALA B 155 ASN B 164 1 ? 10 HELX_P HELX_P20 20 GLN B 190 ? VAL B 194 ? GLN B 189 VAL B 193 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A ILE 3 N ? ? A MSE 1 A ILE 2 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A SER 57 C ? ? ? 1_555 A MSE 58 N ? ? A SER 56 A MSE 57 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A MSE 58 C ? ? ? 1_555 A LEU 59 N ? ? A MSE 57 A LEU 58 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? A ALA 61 C ? ? ? 1_555 A MSE 62 N ? ? A ALA 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A MSE 62 C ? ? ? 1_555 A SER 63 N ? ? A MSE 61 A SER 62 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A ILE 92 C ? ? ? 1_555 A MSE 93 N ? ? A ILE 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A MSE 93 C ? ? ? 1_555 A LYS 94 N ? ? A MSE 92 A LYS 93 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A GLU 122 C ? ? ? 1_555 A MSE 123 N ? ? A GLU 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A MSE 123 C ? ? ? 1_555 A ALA 124 N ? ? A MSE 122 A ALA 123 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale10 covale both ? A ASN 125 C ? ? ? 1_555 A MSE 126 N ? ? A ASN 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale11 covale both ? A MSE 126 C ? ? ? 1_555 A GLN 127 N ? ? A MSE 125 A GLN 126 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? A ASN 135 C ? ? ? 1_555 A MSE 136 N ? ? A ASN 134 A MSE 135 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale13 covale both ? A MSE 136 C ? ? ? 1_555 A SER 137 N ? ? A MSE 135 A SER 136 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale14 covale both ? B SER 57 C ? ? ? 1_555 B MSE 58 N ? ? B SER 56 B MSE 57 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale15 covale both ? B MSE 58 C ? ? ? 1_555 B LEU 59 N ? ? B MSE 57 B LEU 58 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale16 covale both ? B ALA 61 C ? ? ? 1_555 B MSE 62 N ? ? B ALA 60 B MSE 61 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale17 covale both ? B MSE 62 C ? ? ? 1_555 B SER 63 N ? ? B MSE 61 B SER 62 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale18 covale both ? B ILE 92 C ? ? ? 1_555 B MSE 93 N ? ? B ILE 91 B MSE 92 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale19 covale both ? B MSE 93 C ? ? ? 1_555 B LYS 94 N ? ? B MSE 92 B LYS 93 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale20 covale both ? B GLU 122 C ? ? ? 1_555 B MSE 123 N ? ? B GLU 121 B MSE 122 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale21 covale both ? B MSE 123 C ? ? ? 1_555 B ALA 124 N ? ? B MSE 122 B ALA 123 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? B ASN 125 C ? ? ? 1_555 B MSE 126 N ? ? B ASN 124 B MSE 125 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale23 covale both ? B MSE 126 C ? ? ? 1_555 B GLN 127 N ? ? B MSE 125 B GLN 126 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale24 covale both ? B ASN 135 C ? ? ? 1_555 B MSE 136 N ? ? B ASN 134 B MSE 135 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale25 covale both ? B MSE 136 C ? ? ? 1_555 B SER 137 N ? ? B MSE 135 B SER 136 1_555 ? ? ? ? ? ? ? 1.340 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 146 ? ILE A 150 ? GLY A 145 ILE A 149 A 2 GLN A 169 ? GLY A 177 ? GLN A 168 GLY A 176 A 3 VAL A 98 ? ASN A 104 ? VAL A 97 ASN A 103 A 4 TRP A 45 ? ILE A 50 ? TRP A 44 ILE A 49 A 5 THR B 195 ? ARG B 198 ? THR B 194 ARG B 197 B 1 THR A 195 ? ARG A 198 ? THR A 194 ARG A 197 B 2 TRP B 45 ? ILE B 50 ? TRP B 44 ILE B 49 B 3 VAL B 98 ? ASN B 104 ? VAL B 97 ASN B 103 B 4 GLN B 169 ? GLY B 177 ? GLN B 168 GLY B 176 B 5 GLY B 146 ? ILE B 150 ? GLY B 145 ILE B 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 146 ? N GLY A 145 O GLY A 177 ? O GLY A 176 A 2 3 O ALA A 172 ? O ALA A 171 N ILE A 102 ? N ILE A 101 A 3 4 O LEU A 103 ? O LEU A 102 N ARG A 46 ? N ARG A 45 A 4 5 N VAL A 49 ? N VAL A 48 O ARG B 198 ? O ARG B 197 B 1 2 N ARG A 198 ? N ARG A 197 O VAL B 49 ? O VAL B 48 B 2 3 N ILE B 50 ? N ILE B 49 O THR B 99 ? O THR B 98 B 3 4 N ILE B 102 ? N ILE B 101 O ALA B 172 ? O ALA B 171 B 4 5 O GLY B 177 ? O GLY B 176 N GLY B 146 ? N GLY B 145 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMN 200 ? 23 'BINDING SITE FOR RESIDUE FMN A 200' AC2 Software A CL 198 ? 3 'BINDING SITE FOR RESIDUE CL A 198' AC3 Software A GOL 199 ? 8 'BINDING SITE FOR RESIDUE GOL A 199' AC4 Software A GOL 201 ? 4 'BINDING SITE FOR RESIDUE GOL A 201' AC5 Software A GOL 202 ? 9 'BINDING SITE FOR RESIDUE GOL A 202' AC6 Software B FMN 200 ? 24 'BINDING SITE FOR RESIDUE FMN B 200' AC7 Software B CL 198 ? 3 'BINDING SITE FOR RESIDUE CL B 198' AC8 Software B MPD 199 ? 8 'BINDING SITE FOR RESIDUE MPD B 199' AC9 Software B MRD 201 ? 8 'BINDING SITE FOR RESIDUE MRD B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 10 ? ARG A 9 . ? 1_555 ? 2 AC1 23 ARG A 11 ? ARG A 10 . ? 1_555 ? 3 AC1 23 SER A 12 ? SER A 11 . ? 1_555 ? 4 AC1 23 ARG A 14 ? ARG A 13 . ? 1_555 ? 5 AC1 23 THR A 89 ? THR A 88 . ? 1_555 ? 6 AC1 23 LEU A 148 ? LEU A 147 . ? 1_555 ? 7 AC1 23 TRP A 149 ? TRP A 148 . ? 1_555 ? 8 AC1 23 ILE A 150 ? ILE A 149 . ? 1_555 ? 9 AC1 23 CYS A 151 ? CYS A 150 . ? 1_555 ? 10 AC1 23 ASP A 152 ? ASP A 151 . ? 1_555 ? 11 AC1 23 ARG A 186 ? ARG A 185 . ? 1_555 ? 12 AC1 23 ARG A 188 ? ARG A 187 . ? 1_555 ? 13 AC1 23 HOH L . ? HOH A 222 . ? 1_555 ? 14 AC1 23 HOH L . ? HOH A 224 . ? 1_555 ? 15 AC1 23 HOH L . ? HOH A 250 . ? 1_555 ? 16 AC1 23 PRO B 37 ? PRO B 36 . ? 1_555 ? 17 AC1 23 SER B 38 ? SER B 37 . ? 1_555 ? 18 AC1 23 SER B 39 ? SER B 38 . ? 1_555 ? 19 AC1 23 ASN B 41 ? ASN B 40 . ? 1_555 ? 20 AC1 23 ALA B 124 ? ALA B 123 . ? 1_555 ? 21 AC1 23 SER B 128 ? SER B 127 . ? 1_555 ? 22 AC1 23 CL I . ? CL B 198 . ? 1_555 ? 23 AC1 23 HOH M . ? HOH B 287 . ? 1_555 ? 24 AC2 3 LYS A 40 ? LYS A 39 . ? 1_555 ? 25 AC2 3 HOH L . ? HOH A 271 . ? 1_555 ? 26 AC2 3 FMN H . ? FMN B 200 . ? 1_555 ? 27 AC3 8 LEU A 106 ? LEU A 105 . ? 1_555 ? 28 AC3 8 GLY A 107 ? GLY A 106 . ? 1_555 ? 29 AC3 8 LYS A 108 ? LYS A 107 . ? 1_555 ? 30 AC3 8 GLU A 112 ? GLU A 111 . ? 2_656 ? 31 AC3 8 LYS A 113 ? LYS A 112 . ? 2_656 ? 32 AC3 8 HOH L . ? HOH A 333 . ? 2_656 ? 33 AC3 8 HOH L . ? HOH A 335 . ? 1_555 ? 34 AC3 8 HOH L . ? HOH A 344 . ? 1_555 ? 35 AC4 4 LEU A 59 ? LEU A 58 . ? 1_555 ? 36 AC4 4 SER A 63 ? SER A 62 . ? 1_555 ? 37 AC4 4 GLU A 91 ? GLU A 90 . ? 1_555 ? 38 AC4 4 LYS A 94 ? LYS A 93 . ? 1_555 ? 39 AC5 9 ARG A 46 ? ARG A 45 . ? 1_555 ? 40 AC5 9 ILE A 105 ? ILE A 104 . ? 1_555 ? 41 AC5 9 THR A 166 ? THR A 165 . ? 1_555 ? 42 AC5 9 ASP A 167 ? ASP A 166 . ? 1_555 ? 43 AC5 9 SER A 168 ? SER A 167 . ? 1_555 ? 44 AC5 9 HOH L . ? HOH A 275 . ? 1_555 ? 45 AC5 9 HOH L . ? HOH A 285 . ? 1_555 ? 46 AC5 9 HOH L . ? HOH A 343 . ? 1_555 ? 47 AC5 9 HOH M . ? HOH B 235 . ? 1_555 ? 48 AC6 24 PRO A 37 ? PRO A 36 . ? 1_555 ? 49 AC6 24 SER A 38 ? SER A 37 . ? 1_555 ? 50 AC6 24 SER A 39 ? SER A 38 . ? 1_555 ? 51 AC6 24 ASN A 41 ? ASN A 40 . ? 1_555 ? 52 AC6 24 GLN A 127 ? GLN A 126 . ? 1_555 ? 53 AC6 24 SER A 128 ? SER A 127 . ? 1_555 ? 54 AC6 24 CL D . ? CL A 198 . ? 1_555 ? 55 AC6 24 ARG B 10 ? ARG B 9 . ? 1_555 ? 56 AC6 24 ARG B 11 ? ARG B 10 . ? 1_555 ? 57 AC6 24 SER B 12 ? SER B 11 . ? 1_555 ? 58 AC6 24 ARG B 14 ? ARG B 13 . ? 1_555 ? 59 AC6 24 THR B 89 ? THR B 88 . ? 1_555 ? 60 AC6 24 LEU B 148 ? LEU B 147 . ? 1_555 ? 61 AC6 24 TRP B 149 ? TRP B 148 . ? 1_555 ? 62 AC6 24 ILE B 150 ? ILE B 149 . ? 1_555 ? 63 AC6 24 CYS B 151 ? CYS B 150 . ? 1_555 ? 64 AC6 24 ASP B 152 ? ASP B 151 . ? 1_555 ? 65 AC6 24 ARG B 186 ? ARG B 185 . ? 1_555 ? 66 AC6 24 ARG B 188 ? ARG B 187 . ? 1_555 ? 67 AC6 24 HOH M . ? HOH B 217 . ? 1_555 ? 68 AC6 24 HOH M . ? HOH B 236 . ? 1_555 ? 69 AC6 24 HOH M . ? HOH B 258 . ? 1_555 ? 70 AC6 24 HOH M . ? HOH B 269 . ? 1_555 ? 71 AC6 24 HOH M . ? HOH B 272 . ? 1_555 ? 72 AC7 3 FMN C . ? FMN A 200 . ? 1_555 ? 73 AC7 3 LYS B 40 ? LYS B 39 . ? 1_555 ? 74 AC7 3 HOH M . ? HOH B 361 . ? 1_555 ? 75 AC8 8 LEU A 76 ? LEU A 75 . ? 1_555 ? 76 AC8 8 CYS A 151 ? CYS A 150 . ? 1_555 ? 77 AC8 8 ASP A 152 ? ASP A 151 . ? 1_555 ? 78 AC8 8 PHE A 155 ? PHE A 154 . ? 1_555 ? 79 AC8 8 LYS B 40 ? LYS B 39 . ? 1_555 ? 80 AC8 8 PHE B 120 ? PHE B 119 . ? 1_555 ? 81 AC8 8 TYR B 121 ? TYR B 120 . ? 1_555 ? 82 AC8 8 HOH M . ? HOH B 287 . ? 1_555 ? 83 AC9 8 LYS A 40 ? LYS A 39 . ? 1_555 ? 84 AC9 8 ARG A 42 ? ARG A 41 . ? 1_555 ? 85 AC9 8 PHE A 120 ? PHE A 119 . ? 1_555 ? 86 AC9 8 TYR A 121 ? TYR A 120 . ? 1_555 ? 87 AC9 8 CYS B 151 ? CYS B 150 . ? 1_555 ? 88 AC9 8 ASP B 152 ? ASP B 151 . ? 1_555 ? 89 AC9 8 PHE B 155 ? PHE B 154 . ? 1_555 ? 90 AC9 8 HOH M . ? HOH B 272 . ? 1_555 ? # _atom_sites.entry_id 3GFA _atom_sites.fract_transf_matrix[1][1] 0.013636 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003613 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009100 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017061 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ILE 3 2 2 ILE ILE A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 ASP 5 4 4 ASP ASP A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 SER 12 11 11 SER SER A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 LYS 15 14 14 LYS LYS A . n A 1 16 TYR 16 15 15 TYR TYR A . n A 1 17 LYS 17 16 16 LYS LYS A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 THR 25 24 24 THR THR A . n A 1 26 ILE 26 25 25 ILE ILE A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 ILE 29 28 28 ILE ILE A . n A 1 30 ILE 30 29 29 ILE ILE A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 ILE 34 33 33 ILE ILE A . n A 1 35 ASN 35 34 34 ASN ASN A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 SER 39 38 38 SER SER A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 ASN 41 40 40 ASN ASN A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 GLN 43 42 42 GLN GLN A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 TRP 45 44 44 TRP TRP A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 VAL 48 47 47 VAL VAL A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 GLU 54 53 53 GLU GLU A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 GLU 56 55 55 GLU GLU A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 MSE 58 57 57 MSE MSE A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 LYS 60 59 59 LYS LYS A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 MSE 62 61 61 MSE MSE A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 ILE 66 65 65 ILE ILE A . n A 1 67 GLN 67 66 66 GLN GLN A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 ASN 73 72 72 ASN ASN A . n A 1 74 GLY 74 73 73 GLY GLY A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 HIS 82 81 81 HIS HIS A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 GLY 85 84 84 GLY GLY A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 THR 89 88 88 THR THR A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 MSE 93 92 92 MSE MSE A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 ILE 102 101 101 ILE ILE A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 LYS 108 107 107 LYS LYS A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 PRO 110 109 109 PRO PRO A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 LYS 113 112 112 LYS LYS A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 SER 115 114 114 SER SER A . n A 1 116 PRO 116 115 115 PRO PRO A . n A 1 117 GLU 117 116 116 GLU GLU A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 TYR 121 120 120 TYR TYR A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 MSE 123 122 122 MSE MSE A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 MSE 126 125 125 MSE MSE A . n A 1 127 GLN 127 126 126 GLN GLN A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 GLY 130 129 129 GLY GLY A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 ILE 133 132 132 ILE ILE A . n A 1 134 GLN 134 133 133 GLN GLN A . n A 1 135 ASN 135 134 134 ASN ASN A . n A 1 136 MSE 136 135 135 MSE MSE A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 THR 139 138 138 THR THR A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 VAL 141 140 140 VAL VAL A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 TRP 149 148 148 TRP TRP A . n A 1 150 ILE 150 149 149 ILE ILE A . n A 1 151 CYS 151 150 150 CYS CYS A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 TYR 154 153 153 TYR TYR A . n A 1 155 PHE 155 154 154 PHE PHE A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 TYR 157 156 156 TYR TYR A . n A 1 158 ARG 158 157 157 ARG ARG A . n A 1 159 GLU 159 158 158 GLU GLU A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 CYS 161 160 160 CYS CYS A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 TRP 163 162 162 TRP TRP A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 ASN 165 164 164 ASN ASN A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 ASP 167 166 166 ASP ASP A . n A 1 168 SER 168 167 167 SER SER A . n A 1 169 GLN 169 168 168 GLN GLN A . n A 1 170 LEU 170 169 169 LEU LEU A . n A 1 171 VAL 171 170 170 VAL VAL A . n A 1 172 ALA 172 171 171 ALA ALA A . n A 1 173 ALA 173 172 172 ALA ALA A . n A 1 174 ILE 174 173 173 ILE ILE A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 LEU 176 175 175 LEU LEU A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 TYR 178 177 177 TYR TYR A . n A 1 179 PRO 179 178 178 PRO PRO A . n A 1 180 ASP 180 179 179 ASP ASP A . n A 1 181 GLU 181 180 180 GLU GLU A . n A 1 182 GLU 182 181 181 GLU GLU A . n A 1 183 PRO 183 182 182 PRO PRO A . n A 1 184 SER 184 183 183 SER SER A . n A 1 185 ARG 185 184 184 ARG ARG A . n A 1 186 ARG 186 185 185 ARG ARG A . n A 1 187 PRO 187 186 186 PRO PRO A . n A 1 188 ARG 188 187 187 ARG ARG A . n A 1 189 LEU 189 188 188 LEU LEU A . n A 1 190 GLN 190 189 189 GLN GLN A . n A 1 191 LEU 191 190 190 LEU LEU A . n A 1 192 SER 192 191 191 SER SER A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 VAL 194 193 193 VAL VAL A . n A 1 195 THR 195 194 194 THR THR A . n A 1 196 GLU 196 195 195 GLU GLU A . n A 1 197 TRP 197 196 196 TRP TRP A . n A 1 198 ARG 198 197 197 ARG ARG A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 ILE 3 2 2 ILE ILE B . n B 1 4 SER 4 3 3 SER SER B . n B 1 5 ASP 5 4 4 ASP ASP B . n B 1 6 SER 6 5 5 SER SER B . n B 1 7 ILE 7 6 6 ILE ILE B . n B 1 8 SER 8 7 7 SER SER B . n B 1 9 LYS 9 8 8 LYS LYS B . n B 1 10 ARG 10 9 9 ARG ARG B . n B 1 11 ARG 11 10 10 ARG ARG B . n B 1 12 SER 12 11 11 SER SER B . n B 1 13 ILE 13 12 12 ILE ILE B . n B 1 14 ARG 14 13 13 ARG ARG B . n B 1 15 LYS 15 14 14 LYS LYS B . n B 1 16 TYR 16 15 15 TYR TYR B . n B 1 17 LYS 17 16 16 LYS LYS B . n B 1 18 ASN 18 17 17 ASN ASN B . n B 1 19 GLN 19 18 18 GLN GLN B . n B 1 20 SER 20 19 19 SER SER B . n B 1 21 ILE 21 20 20 ILE ILE B . n B 1 22 SER 22 21 21 SER SER B . n B 1 23 HIS 23 22 22 HIS HIS B . n B 1 24 GLU 24 23 23 GLU GLU B . n B 1 25 THR 25 24 24 THR THR B . n B 1 26 ILE 26 25 25 ILE ILE B . n B 1 27 GLU 27 26 26 GLU GLU B . n B 1 28 LYS 28 27 27 LYS LYS B . n B 1 29 ILE 29 28 28 ILE ILE B . n B 1 30 ILE 30 29 29 ILE ILE B . n B 1 31 GLU 31 30 30 GLU GLU B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 GLY 33 32 32 GLY GLY B . n B 1 34 ILE 34 33 33 ILE ILE B . n B 1 35 ASN 35 34 34 ASN ASN B . n B 1 36 ALA 36 35 35 ALA ALA B . n B 1 37 PRO 37 36 36 PRO PRO B . n B 1 38 SER 38 37 37 SER SER B . n B 1 39 SER 39 38 38 SER SER B . n B 1 40 LYS 40 39 39 LYS LYS B . n B 1 41 ASN 41 40 40 ASN ASN B . n B 1 42 ARG 42 41 41 ARG ARG B . n B 1 43 GLN 43 42 42 GLN GLN B . n B 1 44 PRO 44 43 43 PRO PRO B . n B 1 45 TRP 45 44 44 TRP TRP B . n B 1 46 ARG 46 45 45 ARG ARG B . n B 1 47 PHE 47 46 46 PHE PHE B . n B 1 48 VAL 48 47 47 VAL VAL B . n B 1 49 VAL 49 48 48 VAL VAL B . n B 1 50 ILE 50 49 49 ILE ILE B . n B 1 51 THR 51 50 50 THR THR B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 LYS 53 52 52 LYS LYS B . n B 1 54 GLU 54 53 53 GLU GLU B . n B 1 55 LYS 55 54 54 LYS LYS B . n B 1 56 GLU 56 55 55 GLU GLU B . n B 1 57 SER 57 56 56 SER SER B . n B 1 58 MSE 58 57 57 MSE MSE B . n B 1 59 LEU 59 58 58 LEU LEU B . n B 1 60 LYS 60 59 59 LYS LYS B . n B 1 61 ALA 61 60 60 ALA ALA B . n B 1 62 MSE 62 61 61 MSE MSE B . n B 1 63 SER 63 62 62 SER SER B . n B 1 64 LYS 64 63 63 LYS LYS B . n B 1 65 GLY 65 64 64 GLY GLY B . n B 1 66 ILE 66 65 65 ILE ILE B . n B 1 67 GLN 67 66 66 GLN GLN B . n B 1 68 ASN 68 67 67 ASN ASN B . n B 1 69 GLU 69 68 68 GLU GLU B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 ASN 71 70 70 ASN ASN B . n B 1 72 ASP 72 71 71 ASP ASP B . n B 1 73 ASN 73 72 72 ASN ASN B . n B 1 74 GLY 74 73 73 GLY GLY B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 LEU 76 75 75 LEU LEU B . n B 1 77 PRO 77 76 76 PRO PRO B . n B 1 78 GLY 78 77 77 GLY GLY B . n B 1 79 SER 79 78 78 SER SER B . n B 1 80 ARG 80 79 79 ARG ARG B . n B 1 81 GLN 81 80 80 GLN GLN B . n B 1 82 HIS 82 81 81 HIS HIS B . n B 1 83 ILE 83 82 82 ILE ILE B . n B 1 84 ALA 84 83 83 ALA ALA B . n B 1 85 GLY 85 84 84 GLY GLY B . n B 1 86 ALA 86 85 85 ALA ALA B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 TYR 88 87 87 TYR TYR B . n B 1 89 THR 89 88 88 THR THR B . n B 1 90 VAL 90 89 89 VAL VAL B . n B 1 91 GLU 91 90 90 GLU GLU B . n B 1 92 ILE 92 91 91 ILE ILE B . n B 1 93 MSE 93 92 92 MSE MSE B . n B 1 94 LYS 94 93 93 LYS LYS B . n B 1 95 GLN 95 94 94 GLN GLN B . n B 1 96 ALA 96 95 95 ALA ALA B . n B 1 97 PRO 97 96 96 PRO PRO B . n B 1 98 VAL 98 97 97 VAL VAL B . n B 1 99 THR 99 98 98 THR THR B . n B 1 100 ILE 100 99 99 ILE ILE B . n B 1 101 PHE 101 100 100 PHE PHE B . n B 1 102 ILE 102 101 101 ILE ILE B . n B 1 103 LEU 103 102 102 LEU LEU B . n B 1 104 ASN 104 103 103 ASN ASN B . n B 1 105 ILE 105 104 104 ILE ILE B . n B 1 106 LEU 106 105 105 LEU LEU B . n B 1 107 GLY 107 106 106 GLY GLY B . n B 1 108 LYS 108 107 107 LYS LYS B . n B 1 109 SER 109 108 108 SER SER B . n B 1 110 PRO 110 109 109 PRO PRO B . n B 1 111 LEU 111 110 110 LEU LEU B . n B 1 112 GLU 112 111 111 GLU GLU B . n B 1 113 LYS 113 112 112 LYS LYS B . n B 1 114 LEU 114 113 113 LEU LEU B . n B 1 115 SER 115 114 114 SER SER B . n B 1 116 PRO 116 115 115 PRO PRO B . n B 1 117 GLU 117 116 116 GLU GLU B . n B 1 118 GLU 118 117 117 GLU GLU B . n B 1 119 ARG 119 118 118 ARG ARG B . n B 1 120 PHE 120 119 119 PHE PHE B . n B 1 121 TYR 121 120 120 TYR TYR B . n B 1 122 GLU 122 121 121 GLU GLU B . n B 1 123 MSE 123 122 122 MSE MSE B . n B 1 124 ALA 124 123 123 ALA ALA B . n B 1 125 ASN 125 124 124 ASN ASN B . n B 1 126 MSE 126 125 125 MSE MSE B . n B 1 127 GLN 127 126 126 GLN GLN B . n B 1 128 SER 128 127 127 SER SER B . n B 1 129 ILE 129 128 128 ILE ILE B . n B 1 130 GLY 130 129 129 GLY GLY B . n B 1 131 ALA 131 130 130 ALA ALA B . n B 1 132 ALA 132 131 131 ALA ALA B . n B 1 133 ILE 133 132 132 ILE ILE B . n B 1 134 GLN 134 133 133 GLN GLN B . n B 1 135 ASN 135 134 134 ASN ASN B . n B 1 136 MSE 136 135 135 MSE MSE B . n B 1 137 SER 137 136 136 SER SER B . n B 1 138 LEU 138 137 137 LEU LEU B . n B 1 139 THR 139 138 138 THR THR B . n B 1 140 ALA 140 139 139 ALA ALA B . n B 1 141 VAL 141 140 140 VAL VAL B . n B 1 142 GLU 142 141 141 GLU GLU B . n B 1 143 LEU 143 142 142 LEU LEU B . n B 1 144 GLY 144 143 143 GLY GLY B . n B 1 145 LEU 145 144 144 LEU LEU B . n B 1 146 GLY 146 145 145 GLY GLY B . n B 1 147 SER 147 146 146 SER SER B . n B 1 148 LEU 148 147 147 LEU LEU B . n B 1 149 TRP 149 148 148 TRP TRP B . n B 1 150 ILE 150 149 149 ILE ILE B . n B 1 151 CYS 151 150 150 CYS CYS B . n B 1 152 ASP 152 151 151 ASP ASP B . n B 1 153 VAL 153 152 152 VAL VAL B . n B 1 154 TYR 154 153 153 TYR TYR B . n B 1 155 PHE 155 154 154 PHE PHE B . n B 1 156 ALA 156 155 155 ALA ALA B . n B 1 157 TYR 157 156 156 TYR TYR B . n B 1 158 ARG 158 157 157 ARG ARG B . n B 1 159 GLU 159 158 158 GLU GLU B . n B 1 160 LEU 160 159 159 LEU LEU B . n B 1 161 CYS 161 160 160 CYS CYS B . n B 1 162 GLU 162 161 161 GLU GLU B . n B 1 163 TRP 163 162 162 TRP TRP B . n B 1 164 LEU 164 163 163 LEU LEU B . n B 1 165 ASN 165 164 164 ASN ASN B . n B 1 166 THR 166 165 165 THR THR B . n B 1 167 ASP 167 166 166 ASP ASP B . n B 1 168 SER 168 167 167 SER SER B . n B 1 169 GLN 169 168 168 GLN GLN B . n B 1 170 LEU 170 169 169 LEU LEU B . n B 1 171 VAL 171 170 170 VAL VAL B . n B 1 172 ALA 172 171 171 ALA ALA B . n B 1 173 ALA 173 172 172 ALA ALA B . n B 1 174 ILE 174 173 173 ILE ILE B . n B 1 175 SER 175 174 174 SER SER B . n B 1 176 LEU 176 175 175 LEU LEU B . n B 1 177 GLY 177 176 176 GLY GLY B . n B 1 178 TYR 178 177 177 TYR TYR B . n B 1 179 PRO 179 178 178 PRO PRO B . n B 1 180 ASP 180 179 179 ASP ASP B . n B 1 181 GLU 181 180 180 GLU GLU B . n B 1 182 GLU 182 181 181 GLU GLU B . n B 1 183 PRO 183 182 182 PRO PRO B . n B 1 184 SER 184 183 183 SER SER B . n B 1 185 ARG 185 184 184 ARG ARG B . n B 1 186 ARG 186 185 185 ARG ARG B . n B 1 187 PRO 187 186 186 PRO PRO B . n B 1 188 ARG 188 187 187 ARG ARG B . n B 1 189 LEU 189 188 188 LEU LEU B . n B 1 190 GLN 190 189 189 GLN GLN B . n B 1 191 LEU 191 190 190 LEU LEU B . n B 1 192 SER 192 191 191 SER SER B . n B 1 193 ASP 193 192 192 ASP ASP B . n B 1 194 VAL 194 193 193 VAL VAL B . n B 1 195 THR 195 194 194 THR THR B . n B 1 196 GLU 196 195 195 GLU GLU B . n B 1 197 TRP 197 196 196 TRP TRP B . n B 1 198 ARG 198 197 197 ARG ARG B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN 1 200 200 FMN FMN A . D 3 CL 1 198 198 CL CL A . E 4 GOL 1 199 199 GOL GOL A . F 4 GOL 1 201 201 GOL GOL A . G 4 GOL 1 202 202 GOL GOL A . H 2 FMN 1 200 200 FMN FMN B . I 3 CL 1 198 198 CL CL B . J 5 MPD 1 199 199 MPD MPD B . K 6 MRD 1 201 201 MRD MRD B . L 7 HOH 1 203 203 HOH HOH A . L 7 HOH 2 204 204 HOH HOH A . L 7 HOH 3 205 205 HOH HOH A . L 7 HOH 4 206 206 HOH HOH A . L 7 HOH 5 207 207 HOH HOH A . L 7 HOH 6 208 208 HOH HOH A . L 7 HOH 7 209 209 HOH HOH A . L 7 HOH 8 210 210 HOH HOH A . L 7 HOH 9 211 211 HOH HOH A . L 7 HOH 10 212 212 HOH HOH A . L 7 HOH 11 213 213 HOH HOH A . L 7 HOH 12 214 214 HOH HOH A . L 7 HOH 13 215 215 HOH HOH A . L 7 HOH 14 216 216 HOH HOH A . L 7 HOH 15 217 217 HOH HOH A . L 7 HOH 16 218 218 HOH HOH A . L 7 HOH 17 219 219 HOH HOH A . L 7 HOH 18 220 220 HOH HOH A . L 7 HOH 19 221 221 HOH HOH A . L 7 HOH 20 222 222 HOH HOH A . L 7 HOH 21 223 223 HOH HOH A . L 7 HOH 22 224 224 HOH HOH A . L 7 HOH 23 225 225 HOH HOH A . L 7 HOH 24 226 226 HOH HOH A . L 7 HOH 25 227 227 HOH HOH A . L 7 HOH 26 228 228 HOH HOH A . L 7 HOH 27 229 229 HOH HOH A . L 7 HOH 28 230 230 HOH HOH A . L 7 HOH 29 231 231 HOH HOH A . L 7 HOH 30 232 232 HOH HOH A . L 7 HOH 31 233 233 HOH HOH A . L 7 HOH 32 234 234 HOH HOH A . L 7 HOH 33 235 235 HOH HOH A . L 7 HOH 34 236 236 HOH HOH A . L 7 HOH 35 237 237 HOH HOH A . L 7 HOH 36 238 238 HOH HOH A . L 7 HOH 37 239 239 HOH HOH A . L 7 HOH 38 240 240 HOH HOH A . L 7 HOH 39 241 241 HOH HOH A . L 7 HOH 40 242 242 HOH HOH A . L 7 HOH 41 243 243 HOH HOH A . L 7 HOH 42 244 244 HOH HOH A . L 7 HOH 43 245 245 HOH HOH A . L 7 HOH 44 246 246 HOH HOH A . L 7 HOH 45 247 247 HOH HOH A . L 7 HOH 46 248 248 HOH HOH A . L 7 HOH 47 249 249 HOH HOH A . L 7 HOH 48 250 250 HOH HOH A . L 7 HOH 49 251 251 HOH HOH A . L 7 HOH 50 252 252 HOH HOH A . L 7 HOH 51 253 253 HOH HOH A . L 7 HOH 52 254 254 HOH HOH A . L 7 HOH 53 255 255 HOH HOH A . L 7 HOH 54 256 256 HOH HOH A . L 7 HOH 55 257 257 HOH HOH A . L 7 HOH 56 258 258 HOH HOH A . L 7 HOH 57 259 259 HOH HOH A . L 7 HOH 58 260 260 HOH HOH A . L 7 HOH 59 261 261 HOH HOH A . L 7 HOH 60 262 262 HOH HOH A . L 7 HOH 61 263 263 HOH HOH A . L 7 HOH 62 264 264 HOH HOH A . L 7 HOH 63 265 265 HOH HOH A . L 7 HOH 64 266 266 HOH HOH A . L 7 HOH 65 267 267 HOH HOH A . L 7 HOH 66 268 268 HOH HOH A . L 7 HOH 67 269 269 HOH HOH A . L 7 HOH 68 270 270 HOH HOH A . L 7 HOH 69 271 271 HOH HOH A . L 7 HOH 70 272 272 HOH HOH A . L 7 HOH 71 273 273 HOH HOH A . L 7 HOH 72 274 274 HOH HOH A . L 7 HOH 73 275 275 HOH HOH A . L 7 HOH 74 276 276 HOH HOH A . L 7 HOH 75 277 277 HOH HOH A . L 7 HOH 76 278 278 HOH HOH A . L 7 HOH 77 279 279 HOH HOH A . L 7 HOH 78 280 280 HOH HOH A . L 7 HOH 79 281 281 HOH HOH A . L 7 HOH 80 282 282 HOH HOH A . L 7 HOH 81 283 283 HOH HOH A . L 7 HOH 82 284 284 HOH HOH A . L 7 HOH 83 285 285 HOH HOH A . L 7 HOH 84 286 286 HOH HOH A . L 7 HOH 85 287 287 HOH HOH A . L 7 HOH 86 288 288 HOH HOH A . L 7 HOH 87 289 289 HOH HOH A . L 7 HOH 88 290 290 HOH HOH A . L 7 HOH 89 291 291 HOH HOH A . L 7 HOH 90 292 292 HOH HOH A . L 7 HOH 91 293 293 HOH HOH A . L 7 HOH 92 294 294 HOH HOH A . L 7 HOH 93 295 295 HOH HOH A . L 7 HOH 94 296 296 HOH HOH A . L 7 HOH 95 297 297 HOH HOH A . L 7 HOH 96 298 298 HOH HOH A . L 7 HOH 97 299 299 HOH HOH A . L 7 HOH 98 300 300 HOH HOH A . L 7 HOH 99 301 301 HOH HOH A . L 7 HOH 100 302 302 HOH HOH A . L 7 HOH 101 303 303 HOH HOH A . L 7 HOH 102 304 304 HOH HOH A . L 7 HOH 103 305 305 HOH HOH A . L 7 HOH 104 306 306 HOH HOH A . L 7 HOH 105 307 307 HOH HOH A . L 7 HOH 106 308 308 HOH HOH A . L 7 HOH 107 309 309 HOH HOH A . L 7 HOH 108 310 310 HOH HOH A . L 7 HOH 109 311 311 HOH HOH A . L 7 HOH 110 312 312 HOH HOH A . L 7 HOH 111 313 313 HOH HOH A . L 7 HOH 112 314 314 HOH HOH A . L 7 HOH 113 315 315 HOH HOH A . L 7 HOH 114 316 316 HOH HOH A . L 7 HOH 115 317 317 HOH HOH A . L 7 HOH 116 318 318 HOH HOH A . L 7 HOH 117 319 319 HOH HOH A . L 7 HOH 118 320 320 HOH HOH A . L 7 HOH 119 321 321 HOH HOH A . L 7 HOH 120 322 322 HOH HOH A . L 7 HOH 121 323 323 HOH HOH A . L 7 HOH 122 324 324 HOH HOH A . L 7 HOH 123 325 325 HOH HOH A . L 7 HOH 124 326 326 HOH HOH A . L 7 HOH 125 327 327 HOH HOH A . L 7 HOH 126 328 328 HOH HOH A . L 7 HOH 127 329 329 HOH HOH A . L 7 HOH 128 330 330 HOH HOH A . L 7 HOH 129 331 331 HOH HOH A . L 7 HOH 130 332 332 HOH HOH A . L 7 HOH 131 333 333 HOH HOH A . L 7 HOH 132 334 334 HOH HOH A . L 7 HOH 133 335 335 HOH HOH A . L 7 HOH 134 336 336 HOH HOH A . L 7 HOH 135 337 337 HOH HOH A . L 7 HOH 136 338 338 HOH HOH A . L 7 HOH 137 339 339 HOH HOH A . L 7 HOH 138 340 340 HOH HOH A . L 7 HOH 139 341 341 HOH HOH A . L 7 HOH 140 342 342 HOH HOH A . L 7 HOH 141 343 343 HOH HOH A . L 7 HOH 142 344 344 HOH HOH A . L 7 HOH 143 345 345 HOH HOH A . L 7 HOH 144 346 346 HOH HOH A . L 7 HOH 145 347 347 HOH HOH A . L 7 HOH 146 348 348 HOH HOH A . L 7 HOH 147 349 349 HOH HOH A . L 7 HOH 148 350 350 HOH HOH A . L 7 HOH 149 351 351 HOH HOH A . L 7 HOH 150 352 352 HOH HOH A . L 7 HOH 151 353 353 HOH HOH A . L 7 HOH 152 354 354 HOH HOH A . L 7 HOH 153 355 355 HOH HOH A . L 7 HOH 154 356 356 HOH HOH A . L 7 HOH 155 357 357 HOH HOH A . L 7 HOH 156 358 358 HOH HOH A . L 7 HOH 157 359 359 HOH HOH A . L 7 HOH 158 360 360 HOH HOH A . L 7 HOH 159 361 361 HOH HOH A . L 7 HOH 160 362 362 HOH HOH A . L 7 HOH 161 363 363 HOH HOH A . L 7 HOH 162 364 364 HOH HOH A . L 7 HOH 163 365 365 HOH HOH A . M 7 HOH 1 202 202 HOH HOH B . M 7 HOH 2 203 203 HOH HOH B . M 7 HOH 3 204 204 HOH HOH B . M 7 HOH 4 205 205 HOH HOH B . M 7 HOH 5 206 206 HOH HOH B . M 7 HOH 6 207 207 HOH HOH B . M 7 HOH 7 208 208 HOH HOH B . M 7 HOH 8 209 209 HOH HOH B . M 7 HOH 9 210 210 HOH HOH B . M 7 HOH 10 211 211 HOH HOH B . M 7 HOH 11 212 212 HOH HOH B . M 7 HOH 12 213 213 HOH HOH B . M 7 HOH 13 214 214 HOH HOH B . M 7 HOH 14 215 215 HOH HOH B . M 7 HOH 15 216 216 HOH HOH B . M 7 HOH 16 217 217 HOH HOH B . M 7 HOH 17 218 218 HOH HOH B . M 7 HOH 18 219 219 HOH HOH B . M 7 HOH 19 220 220 HOH HOH B . M 7 HOH 20 221 221 HOH HOH B . M 7 HOH 21 222 222 HOH HOH B . M 7 HOH 22 223 223 HOH HOH B . M 7 HOH 23 224 224 HOH HOH B . M 7 HOH 24 225 225 HOH HOH B . M 7 HOH 25 226 226 HOH HOH B . M 7 HOH 26 227 227 HOH HOH B . M 7 HOH 27 228 228 HOH HOH B . M 7 HOH 28 229 229 HOH HOH B . M 7 HOH 29 230 230 HOH HOH B . M 7 HOH 30 231 231 HOH HOH B . M 7 HOH 31 232 232 HOH HOH B . M 7 HOH 32 233 233 HOH HOH B . M 7 HOH 33 234 234 HOH HOH B . M 7 HOH 34 235 235 HOH HOH B . M 7 HOH 35 236 236 HOH HOH B . M 7 HOH 36 237 237 HOH HOH B . M 7 HOH 37 238 238 HOH HOH B . M 7 HOH 38 239 239 HOH HOH B . M 7 HOH 39 240 240 HOH HOH B . M 7 HOH 40 241 241 HOH HOH B . M 7 HOH 41 242 242 HOH HOH B . M 7 HOH 42 243 243 HOH HOH B . M 7 HOH 43 244 244 HOH HOH B . M 7 HOH 44 245 245 HOH HOH B . M 7 HOH 45 246 246 HOH HOH B . M 7 HOH 46 247 247 HOH HOH B . M 7 HOH 47 248 248 HOH HOH B . M 7 HOH 48 249 249 HOH HOH B . M 7 HOH 49 250 250 HOH HOH B . M 7 HOH 50 251 251 HOH HOH B . M 7 HOH 51 252 252 HOH HOH B . M 7 HOH 52 253 253 HOH HOH B . M 7 HOH 53 254 254 HOH HOH B . M 7 HOH 54 255 255 HOH HOH B . M 7 HOH 55 256 256 HOH HOH B . M 7 HOH 56 257 257 HOH HOH B . M 7 HOH 57 258 258 HOH HOH B . M 7 HOH 58 259 259 HOH HOH B . M 7 HOH 59 260 260 HOH HOH B . M 7 HOH 60 261 261 HOH HOH B . M 7 HOH 61 262 262 HOH HOH B . M 7 HOH 62 263 263 HOH HOH B . M 7 HOH 63 264 264 HOH HOH B . M 7 HOH 64 265 265 HOH HOH B . M 7 HOH 65 266 266 HOH HOH B . M 7 HOH 66 267 267 HOH HOH B . M 7 HOH 67 268 268 HOH HOH B . M 7 HOH 68 269 269 HOH HOH B . M 7 HOH 69 270 270 HOH HOH B . M 7 HOH 70 271 271 HOH HOH B . M 7 HOH 71 272 272 HOH HOH B . M 7 HOH 72 273 273 HOH HOH B . M 7 HOH 73 274 274 HOH HOH B . M 7 HOH 74 275 275 HOH HOH B . M 7 HOH 75 276 276 HOH HOH B . M 7 HOH 76 277 277 HOH HOH B . M 7 HOH 77 278 278 HOH HOH B . M 7 HOH 78 279 279 HOH HOH B . M 7 HOH 79 280 280 HOH HOH B . M 7 HOH 80 281 281 HOH HOH B . M 7 HOH 81 282 282 HOH HOH B . M 7 HOH 82 283 283 HOH HOH B . M 7 HOH 83 284 284 HOH HOH B . M 7 HOH 84 285 285 HOH HOH B . M 7 HOH 85 286 286 HOH HOH B . M 7 HOH 86 287 287 HOH HOH B . M 7 HOH 87 288 288 HOH HOH B . M 7 HOH 88 289 289 HOH HOH B . M 7 HOH 89 290 290 HOH HOH B . M 7 HOH 90 291 291 HOH HOH B . M 7 HOH 91 292 292 HOH HOH B . M 7 HOH 92 293 293 HOH HOH B . M 7 HOH 93 294 294 HOH HOH B . M 7 HOH 94 295 295 HOH HOH B . M 7 HOH 95 296 296 HOH HOH B . M 7 HOH 96 297 297 HOH HOH B . M 7 HOH 97 298 298 HOH HOH B . M 7 HOH 98 299 299 HOH HOH B . M 7 HOH 99 300 300 HOH HOH B . M 7 HOH 100 301 301 HOH HOH B . M 7 HOH 101 302 302 HOH HOH B . M 7 HOH 102 303 303 HOH HOH B . M 7 HOH 103 304 304 HOH HOH B . M 7 HOH 104 305 305 HOH HOH B . M 7 HOH 105 306 306 HOH HOH B . M 7 HOH 106 307 307 HOH HOH B . M 7 HOH 107 308 308 HOH HOH B . M 7 HOH 108 309 309 HOH HOH B . M 7 HOH 109 310 310 HOH HOH B . M 7 HOH 110 311 311 HOH HOH B . M 7 HOH 111 312 312 HOH HOH B . M 7 HOH 112 313 313 HOH HOH B . M 7 HOH 113 314 314 HOH HOH B . M 7 HOH 114 315 315 HOH HOH B . M 7 HOH 115 316 316 HOH HOH B . M 7 HOH 116 317 317 HOH HOH B . M 7 HOH 117 318 318 HOH HOH B . M 7 HOH 118 319 319 HOH HOH B . M 7 HOH 119 320 320 HOH HOH B . M 7 HOH 120 321 321 HOH HOH B . M 7 HOH 121 322 322 HOH HOH B . M 7 HOH 122 323 323 HOH HOH B . M 7 HOH 123 324 324 HOH HOH B . M 7 HOH 124 325 325 HOH HOH B . M 7 HOH 125 326 326 HOH HOH B . M 7 HOH 126 327 327 HOH HOH B . M 7 HOH 127 328 328 HOH HOH B . M 7 HOH 128 329 329 HOH HOH B . M 7 HOH 129 330 330 HOH HOH B . M 7 HOH 130 331 331 HOH HOH B . M 7 HOH 131 332 332 HOH HOH B . M 7 HOH 132 333 333 HOH HOH B . M 7 HOH 133 334 334 HOH HOH B . M 7 HOH 134 335 335 HOH HOH B . M 7 HOH 135 336 336 HOH HOH B . M 7 HOH 136 337 337 HOH HOH B . M 7 HOH 137 338 338 HOH HOH B . M 7 HOH 138 339 339 HOH HOH B . M 7 HOH 139 340 340 HOH HOH B . M 7 HOH 140 341 341 HOH HOH B . M 7 HOH 141 342 342 HOH HOH B . M 7 HOH 142 343 343 HOH HOH B . M 7 HOH 143 344 344 HOH HOH B . M 7 HOH 144 345 345 HOH HOH B . M 7 HOH 145 346 346 HOH HOH B . M 7 HOH 146 347 347 HOH HOH B . M 7 HOH 147 348 348 HOH HOH B . M 7 HOH 148 349 349 HOH HOH B . M 7 HOH 149 350 350 HOH HOH B . M 7 HOH 150 351 351 HOH HOH B . M 7 HOH 151 352 352 HOH HOH B . M 7 HOH 152 353 353 HOH HOH B . M 7 HOH 153 354 354 HOH HOH B . M 7 HOH 154 355 355 HOH HOH B . M 7 HOH 155 356 356 HOH HOH B . M 7 HOH 156 357 357 HOH HOH B . M 7 HOH 157 358 358 HOH HOH B . M 7 HOH 158 359 359 HOH HOH B . M 7 HOH 159 360 360 HOH HOH B . M 7 HOH 160 361 361 HOH HOH B . M 7 HOH 161 362 362 HOH HOH B . M 7 HOH 162 363 363 HOH HOH B . M 7 HOH 163 364 364 HOH HOH B . M 7 HOH 164 365 365 HOH HOH B . M 7 HOH 165 366 366 HOH HOH B . M 7 HOH 166 367 367 HOH HOH B . M 7 HOH 167 368 368 HOH HOH B . M 7 HOH 168 369 369 HOH HOH B . M 7 HOH 169 370 370 HOH HOH B . M 7 HOH 170 371 371 HOH HOH B . M 7 HOH 171 372 372 HOH HOH B . M 7 HOH 172 373 373 HOH HOH B . M 7 HOH 173 374 374 HOH HOH B . M 7 HOH 174 375 375 HOH HOH B . M 7 HOH 175 376 376 HOH HOH B . M 7 HOH 176 377 377 HOH HOH B . M 7 HOH 177 378 378 HOH HOH B . M 7 HOH 178 379 379 HOH HOH B . M 7 HOH 179 380 380 HOH HOH B . M 7 HOH 180 381 381 HOH HOH B . M 7 HOH 181 382 382 HOH HOH B . M 7 HOH 182 383 383 HOH HOH B . M 7 HOH 183 384 384 HOH HOH B . M 7 HOH 184 385 385 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 57 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 61 ? MET SELENOMETHIONINE 4 A MSE 93 A MSE 92 ? MET SELENOMETHIONINE 5 A MSE 123 A MSE 122 ? MET SELENOMETHIONINE 6 A MSE 126 A MSE 125 ? MET SELENOMETHIONINE 7 A MSE 136 A MSE 135 ? MET SELENOMETHIONINE 8 B MSE 58 B MSE 57 ? MET SELENOMETHIONINE 9 B MSE 62 B MSE 61 ? MET SELENOMETHIONINE 10 B MSE 93 B MSE 92 ? MET SELENOMETHIONINE 11 B MSE 123 B MSE 122 ? MET SELENOMETHIONINE 12 B MSE 126 B MSE 125 ? MET SELENOMETHIONINE 13 B MSE 136 B MSE 135 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10960 ? 1 MORE -74 ? 1 'SSA (A^2)' 14740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 220 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3GFA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 41 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 41 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 41 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 123.46 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.16 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? CG ? A MSE 2 CG 2 1 Y 1 A MSE 1 ? SE ? A MSE 2 SE 3 1 Y 1 A MSE 1 ? CE ? A MSE 2 CE 4 1 Y 1 A ILE 2 ? CB ? A ILE 3 CB 5 1 Y 1 A ILE 2 ? CG1 ? A ILE 3 CG1 6 1 Y 1 A ILE 2 ? CG2 ? A ILE 3 CG2 7 1 Y 1 A ILE 2 ? CD1 ? A ILE 3 CD1 8 1 Y 1 A SER 3 ? OG ? A SER 4 OG 9 1 Y 1 A LYS 8 ? CD ? A LYS 9 CD 10 1 Y 1 A LYS 8 ? CE ? A LYS 9 CE 11 1 Y 1 A LYS 8 ? NZ ? A LYS 9 NZ 12 1 Y 1 A LYS 14 ? CE ? A LYS 15 CE 13 1 Y 1 A LYS 14 ? NZ ? A LYS 15 NZ 14 1 Y 1 A GLU 51 ? CG ? A GLU 52 CG 15 1 Y 1 A GLU 51 ? CD ? A GLU 52 CD 16 1 Y 1 A GLU 51 ? OE1 ? A GLU 52 OE1 17 1 Y 1 A GLU 51 ? OE2 ? A GLU 52 OE2 18 1 Y 1 A LYS 52 ? CE ? A LYS 53 CE 19 1 Y 1 A LYS 52 ? NZ ? A LYS 53 NZ 20 1 Y 1 A GLU 55 ? CD ? A GLU 56 CD 21 1 Y 1 A GLU 55 ? OE1 ? A GLU 56 OE1 22 1 Y 1 A GLU 55 ? OE2 ? A GLU 56 OE2 23 1 Y 1 A LYS 59 ? CG ? A LYS 60 CG 24 1 Y 1 A LYS 59 ? CD ? A LYS 60 CD 25 1 Y 1 A LYS 59 ? CE ? A LYS 60 CE 26 1 Y 1 A LYS 59 ? NZ ? A LYS 60 NZ 27 1 Y 1 A LYS 63 ? CD ? A LYS 64 CD 28 1 Y 1 A LYS 63 ? CE ? A LYS 64 CE 29 1 Y 1 A LYS 63 ? NZ ? A LYS 64 NZ 30 1 Y 1 A GLU 141 ? CD ? A GLU 142 CD 31 1 Y 1 A GLU 141 ? OE1 ? A GLU 142 OE1 32 1 Y 1 A GLU 141 ? OE2 ? A GLU 142 OE2 33 1 Y 1 A GLU 181 ? CD ? A GLU 182 CD 34 1 Y 1 A GLU 181 ? OE1 ? A GLU 182 OE1 35 1 Y 1 A GLU 181 ? OE2 ? A GLU 182 OE2 36 1 Y 1 B ILE 2 ? CG1 ? B ILE 3 CG1 37 1 Y 1 B ILE 2 ? CG2 ? B ILE 3 CG2 38 1 Y 1 B ILE 2 ? CD1 ? B ILE 3 CD1 39 1 Y 1 B SER 3 ? OG ? B SER 4 OG 40 1 Y 1 B LYS 8 ? CD ? B LYS 9 CD 41 1 Y 1 B LYS 8 ? CE ? B LYS 9 CE 42 1 Y 1 B LYS 8 ? NZ ? B LYS 9 NZ 43 1 Y 1 B LYS 14 ? NZ ? B LYS 15 NZ 44 1 Y 1 B LYS 52 ? CE ? B LYS 53 CE 45 1 Y 1 B LYS 52 ? NZ ? B LYS 53 NZ 46 1 Y 1 B LYS 59 ? CD ? B LYS 60 CD 47 1 Y 1 B LYS 59 ? CE ? B LYS 60 CE 48 1 Y 1 B LYS 59 ? NZ ? B LYS 60 NZ 49 1 Y 1 B LYS 63 ? NZ ? B LYS 64 NZ 50 1 Y 1 B ARG 184 ? NE ? B ARG 185 NE 51 1 Y 1 B ARG 184 ? CZ ? B ARG 185 CZ 52 1 Y 1 B ARG 184 ? NH1 ? B ARG 185 NH1 53 1 Y 1 B ARG 184 ? NH2 ? B ARG 185 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 3 1 Y 1 B MSE 1 ? B MSE 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN MONONUCLEOTIDE' FMN 3 'CHLORIDE ION' CL 4 GLYCEROL GOL 5 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 6 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 7 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #