data_3GK4 # _entry.id 3GK4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GK4 pdb_00003gk4 10.2210/pdb3gk4/pdb RCSB RCSB051960 ? ? WWPDB D_1000051960 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1MHO 'THE 2.0 A STRUCTURE OF HOLO S100B FROM BOVINE BRAIN' unspecified PDB 3CR2 'X-ray structure of bovine Zn(2+),Ca(2+)-S100B' unspecified PDB 3CR4 'X-ray structure of bovine Pnt,Ca(2+)-S100B' unspecified PDB 3CR5 'X-ray structure of bovine Pnt-Zn(2+),Ca(2+)-S100B' unspecified PDB 1DT7 'SOLUTION STRUCTURE OF THE C-TERMINAL NEGATIVE REGULATORY DOMAIN OF P53 IN A COMPLEX WITH CA2+-BOUND S100B(BB)' unspecified PDB 3GK1 . unspecified PDB 3GK2 . unspecified # _pdbx_database_status.entry_id 3GK4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-03-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Charpentier, T.H.' 1 ? 'Weber, D.J.' 2 ? 'Toth, E.A.' 3 ? # _citation.id primary _citation.title ;Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 48 _citation.page_first 6202 _citation.page_last 6212 _citation.year 2009 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19469484 _citation.pdbx_database_id_DOI 10.1021/bi9005754 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Charpentier, T.H.' 1 ? primary 'Wilder, P.T.' 2 ? primary 'Liriano, M.A.' 3 ? primary 'Varney, K.M.' 4 ? primary 'Zhong, S.' 5 ? primary 'Coop, A.' 6 ? primary 'Pozharski, E.' 7 ? primary 'MacKerell, A.D.' 8 ? primary 'Toth, E.A.' 9 ? primary 'Weber, D.J.' 10 ? # _cell.length_a 34.459 _cell.length_b 89.532 _cell.length_c 59.234 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3GK4 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 3GK4 _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein S100-B' 10681.974 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 'ethyl 5-{[(1R)-1-(ethoxycarbonyl)-2-oxopropyl]sulfanyl}-1,2-dihydro[1,2,3]triazolo[1,5-a]quinazoline-3-carboxylate' 404.440 1 ? ? ? ? 4 water nat water 18.015 40 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'S100 calcium-binding protein B, S-100 protein subunit beta, S-100 protein beta chain' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM ITTACHEFFEHE ; _entity_poly.pdbx_seq_one_letter_code_can ;MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM ITTACHEFFEHE ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 GLU n 1 4 LEU n 1 5 GLU n 1 6 LYS n 1 7 ALA n 1 8 VAL n 1 9 VAL n 1 10 ALA n 1 11 LEU n 1 12 ILE n 1 13 ASP n 1 14 VAL n 1 15 PHE n 1 16 HIS n 1 17 GLN n 1 18 TYR n 1 19 SER n 1 20 GLY n 1 21 ARG n 1 22 GLU n 1 23 GLY n 1 24 ASP n 1 25 LYS n 1 26 HIS n 1 27 LYS n 1 28 LEU n 1 29 LYS n 1 30 LYS n 1 31 SER n 1 32 GLU n 1 33 LEU n 1 34 LYS n 1 35 GLU n 1 36 LEU n 1 37 ILE n 1 38 ASN n 1 39 ASN n 1 40 GLU n 1 41 LEU n 1 42 SER n 1 43 HIS n 1 44 PHE n 1 45 LEU n 1 46 GLU n 1 47 GLU n 1 48 ILE n 1 49 LYS n 1 50 GLU n 1 51 GLN n 1 52 GLU n 1 53 VAL n 1 54 VAL n 1 55 ASP n 1 56 LYS n 1 57 VAL n 1 58 MET n 1 59 GLU n 1 60 THR n 1 61 LEU n 1 62 ASP n 1 63 SER n 1 64 ASP n 1 65 GLY n 1 66 ASP n 1 67 GLY n 1 68 GLU n 1 69 CYS n 1 70 ASP n 1 71 PHE n 1 72 GLN n 1 73 GLU n 1 74 PHE n 1 75 MET n 1 76 ALA n 1 77 PHE n 1 78 VAL n 1 79 ALA n 1 80 MET n 1 81 ILE n 1 82 THR n 1 83 THR n 1 84 ALA n 1 85 CYS n 1 86 HIS n 1 87 GLU n 1 88 PHE n 1 89 PHE n 1 90 GLU n 1 91 HIS n 1 92 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'bovine,cow,domestic cattle,domestic cow' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene S100B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code S100B_BOVIN _struct_ref.pdbx_db_accession P02638 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM ITTACHEFFEHE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GK4 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02638 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 92 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 91 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 53A non-polymer . 'ethyl 5-{[(1R)-1-(ethoxycarbonyl)-2-oxopropyl]sulfanyl}-1,2-dihydro[1,2,3]triazolo[1,5-a]quinazoline-3-carboxylate' ? 'C18 H20 N4 O5 S' 404.440 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3GK4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '35% PEGMME550, 7.5mM CaCl2, 100mM Bis-Tris buffer, 2.5% Glycerol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-04-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 # _reflns.entry_id 3GK4 _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 7056 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_netI_over_sigmaI 44.176 _reflns.pdbx_chi_squared 1.058 _reflns.pdbx_redundancy 6.300 _reflns.percent_possible_obs 93.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.90 1.97 ? ? ? 0.273 ? ? 0.847 3.60 ? 473 64.80 1 1 1.97 2.05 ? ? ? 0.243 ? ? 0.937 4.80 ? 599 80.60 2 1 2.05 2.14 ? ? ? 0.171 ? ? 1.016 5.60 ? 699 95.40 3 1 2.14 2.25 ? ? ? 0.122 ? ? 1.065 6.50 ? 733 99.20 4 1 2.25 2.39 ? ? ? 0.100 ? ? 1.151 6.90 ? 749 99.70 5 1 2.39 2.58 ? ? ? 0.068 ? ? 1.183 7.10 ? 740 100.00 6 1 2.58 2.84 ? ? ? 0.052 ? ? 1.135 7.10 ? 766 100.00 7 1 2.84 3.25 ? ? ? 0.050 ? ? 1.025 7.00 ? 744 99.90 8 1 3.25 4.09 ? ? ? 0.034 ? ? 0.934 6.80 ? 761 99.10 9 1 4.09 50.00 ? ? ? 0.024 ? ? 1.060 6.50 ? 792 95.80 10 1 # _refine.entry_id 3GK4 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 44.770 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 93.570 _refine.ls_number_reflns_obs 7045 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_R_work 0.209 _refine.ls_wR_factor_R_work 0.240 _refine.ls_R_factor_R_free 0.228 _refine.ls_wR_factor_R_free 0.262 _refine.ls_percent_reflns_R_free 4.600 _refine.ls_number_reflns_R_free 326 _refine.B_iso_mean 47.206 _refine.aniso_B[1][1] 1.440 _refine.aniso_B[2][2] -1.830 _refine.aniso_B[3][3] 0.390 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.overall_SU_R_Cruickshank_DPI 0.214 _refine.overall_SU_R_free 0.172 _refine.pdbx_overall_ESU_R 0.196 _refine.pdbx_overall_ESU_R_Free 0.155 _refine.overall_SU_ML 0.126 _refine.overall_SU_B 8.279 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.818 _refine.B_iso_max 77.50 _refine.B_iso_min 37.49 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 1MHO' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 727 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 797 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 44.770 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 768 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1029 1.620 1.997 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 89 5.069 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40 35.999 26.500 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 145 15.601 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 1 17.574 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 109 0.133 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 577 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 382 0.233 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 534 0.304 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 31 0.229 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 9 0.138 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 63 0.239 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 12 0.199 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 459 0.763 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 714 1.144 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 376 1.979 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 315 3.173 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.901 _refine_ls_shell.d_res_low 1.950 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 60.850 _refine_ls_shell.number_reflns_R_work 317 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.R_factor_R_free 0.343 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 328 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GK4 _struct.title 'X-ray structure of bovine SBi523,Ca(2+)-S100B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GK4 _struct_keywords.text 'EF hand, Alpha helical, Metal-binding, Nucleus, METAL BINDING PROTEIN' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? GLY A 20 ? SER X 1 GLY X 19 1 ? 19 HELX_P HELX_P2 2 LYS A 29 ? LEU A 41 ? LYS X 28 LEU X 40 1 ? 13 HELX_P HELX_P3 3 GLU A 50 ? ASP A 62 ? GLU X 49 ASP X 61 1 ? 13 HELX_P HELX_P4 4 ASP A 70 ? GLU A 90 ? ASP X 69 GLU X 89 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 19 O ? ? ? 1_555 B CA . CA ? ? X SER 18 X CA 92 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc2 metalc ? ? A GLU 22 O ? ? ? 1_555 B CA . CA ? ? X GLU 21 X CA 92 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc3 metalc ? ? A ASP 24 O ? ? ? 1_555 B CA . CA ? ? X ASP 23 X CA 92 1_555 ? ? ? ? ? ? ? 2.321 ? ? metalc4 metalc ? ? A LYS 27 O ? ? ? 1_555 B CA . CA ? ? X LYS 26 X CA 92 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc5 metalc ? ? A GLU 32 OE1 ? ? ? 1_555 B CA . CA ? ? X GLU 31 X CA 92 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc6 metalc ? ? A GLU 32 OE2 ? ? ? 1_555 B CA . CA ? ? X GLU 31 X CA 92 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc7 metalc ? ? A ASP 62 OD1 ? ? ? 1_555 C CA . CA ? ? X ASP 61 X CA 93 1_555 ? ? ? ? ? ? ? 2.197 ? ? metalc8 metalc ? ? A ASP 64 OD1 ? ? ? 1_555 C CA . CA ? ? X ASP 63 X CA 93 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc9 metalc ? ? A ASP 66 OD1 ? ? ? 1_555 C CA . CA ? ? X ASP 65 X CA 93 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc10 metalc ? ? A GLU 68 O ? ? ? 1_555 C CA . CA ? ? X GLU 67 X CA 93 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc11 metalc ? ? A GLU 73 OE1 ? ? ? 1_555 C CA . CA ? ? X GLU 72 X CA 93 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc12 metalc ? ? A GLU 73 OE2 ? ? ? 1_555 C CA . CA ? ? X GLU 72 X CA 93 1_555 ? ? ? ? ? ? ? 2.683 ? ? metalc13 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? X CA 92 X HOH 117 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc14 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? X CA 93 X HOH 113 1_555 ? ? ? ? ? ? ? 2.151 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X CA 92 ? 6 'BINDING SITE FOR RESIDUE CA X 92' AC2 Software X CA 93 ? 6 'BINDING SITE FOR RESIDUE CA X 93' AC3 Software X 53A 94 ? 10 'BINDING SITE FOR RESIDUE 53A X 94' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 19 ? SER X 18 . ? 1_555 ? 2 AC1 6 GLU A 22 ? GLU X 21 . ? 1_555 ? 3 AC1 6 ASP A 24 ? ASP X 23 . ? 1_555 ? 4 AC1 6 LYS A 27 ? LYS X 26 . ? 1_555 ? 5 AC1 6 GLU A 32 ? GLU X 31 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH X 117 . ? 1_555 ? 7 AC2 6 ASP A 62 ? ASP X 61 . ? 1_555 ? 8 AC2 6 ASP A 64 ? ASP X 63 . ? 1_555 ? 9 AC2 6 ASP A 66 ? ASP X 65 . ? 1_555 ? 10 AC2 6 GLU A 68 ? GLU X 67 . ? 1_555 ? 11 AC2 6 GLU A 73 ? GLU X 72 . ? 1_555 ? 12 AC2 6 HOH E . ? HOH X 113 . ? 1_555 ? 13 AC3 10 SER A 42 ? SER X 41 . ? 3_555 ? 14 AC3 10 HIS A 43 ? HIS X 42 . ? 1_555 ? 15 AC3 10 HIS A 43 ? HIS X 42 . ? 3_555 ? 16 AC3 10 PHE A 44 ? PHE X 43 . ? 1_555 ? 17 AC3 10 LEU A 45 ? LEU X 44 . ? 1_555 ? 18 AC3 10 GLU A 46 ? GLU X 45 . ? 3_555 ? 19 AC3 10 GLU A 46 ? GLU X 45 . ? 1_555 ? 20 AC3 10 HOH E . ? HOH X 132 . ? 3_555 ? 21 AC3 10 HOH E . ? HOH X 132 . ? 1_555 ? 22 AC3 10 HOH E . ? HOH X 133 . ? 3_555 ? # _atom_sites.entry_id 3GK4 _atom_sites.fract_transf_matrix[1][1] 0.029020 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011169 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016882 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET X . n A 1 2 SER 2 1 1 SER SER X . n A 1 3 GLU 3 2 2 GLU GLU X . n A 1 4 LEU 4 3 3 LEU LEU X . n A 1 5 GLU 5 4 4 GLU GLU X . n A 1 6 LYS 6 5 5 LYS LYS X . n A 1 7 ALA 7 6 6 ALA ALA X . n A 1 8 VAL 8 7 7 VAL VAL X . n A 1 9 VAL 9 8 8 VAL VAL X . n A 1 10 ALA 10 9 9 ALA ALA X . n A 1 11 LEU 11 10 10 LEU LEU X . n A 1 12 ILE 12 11 11 ILE ILE X . n A 1 13 ASP 13 12 12 ASP ASP X . n A 1 14 VAL 14 13 13 VAL VAL X . n A 1 15 PHE 15 14 14 PHE PHE X . n A 1 16 HIS 16 15 15 HIS HIS X . n A 1 17 GLN 17 16 16 GLN GLN X . n A 1 18 TYR 18 17 17 TYR TYR X . n A 1 19 SER 19 18 18 SER SER X . n A 1 20 GLY 20 19 19 GLY GLY X . n A 1 21 ARG 21 20 20 ARG ARG X . n A 1 22 GLU 22 21 21 GLU GLU X . n A 1 23 GLY 23 22 22 GLY GLY X . n A 1 24 ASP 24 23 23 ASP ASP X . n A 1 25 LYS 25 24 24 LYS LYS X . n A 1 26 HIS 26 25 25 HIS HIS X . n A 1 27 LYS 27 26 26 LYS LYS X . n A 1 28 LEU 28 27 27 LEU LEU X . n A 1 29 LYS 29 28 28 LYS LYS X . n A 1 30 LYS 30 29 29 LYS LYS X . n A 1 31 SER 31 30 30 SER SER X . n A 1 32 GLU 32 31 31 GLU GLU X . n A 1 33 LEU 33 32 32 LEU LEU X . n A 1 34 LYS 34 33 33 LYS LYS X . n A 1 35 GLU 35 34 34 GLU GLU X . n A 1 36 LEU 36 35 35 LEU LEU X . n A 1 37 ILE 37 36 36 ILE ILE X . n A 1 38 ASN 38 37 37 ASN ASN X . n A 1 39 ASN 39 38 38 ASN ASN X . n A 1 40 GLU 40 39 39 GLU GLU X . n A 1 41 LEU 41 40 40 LEU LEU X . n A 1 42 SER 42 41 41 SER SER X . n A 1 43 HIS 43 42 42 HIS HIS X . n A 1 44 PHE 44 43 43 PHE PHE X . n A 1 45 LEU 45 44 44 LEU LEU X . n A 1 46 GLU 46 45 45 GLU GLU X . n A 1 47 GLU 47 46 46 GLU GLU X . n A 1 48 ILE 48 47 47 ILE ILE X . n A 1 49 LYS 49 48 48 LYS LYS X . n A 1 50 GLU 50 49 49 GLU GLU X . n A 1 51 GLN 51 50 50 GLN GLN X . n A 1 52 GLU 52 51 51 GLU GLU X . n A 1 53 VAL 53 52 52 VAL VAL X . n A 1 54 VAL 54 53 53 VAL VAL X . n A 1 55 ASP 55 54 54 ASP ASP X . n A 1 56 LYS 56 55 55 LYS LYS X . n A 1 57 VAL 57 56 56 VAL VAL X . n A 1 58 MET 58 57 57 MET MET X . n A 1 59 GLU 59 58 58 GLU GLU X . n A 1 60 THR 60 59 59 THR THR X . n A 1 61 LEU 61 60 60 LEU LEU X . n A 1 62 ASP 62 61 61 ASP ASP X . n A 1 63 SER 63 62 62 SER SER X . n A 1 64 ASP 64 63 63 ASP ASP X . n A 1 65 GLY 65 64 64 GLY GLY X . n A 1 66 ASP 66 65 65 ASP ASP X . n A 1 67 GLY 67 66 66 GLY GLY X . n A 1 68 GLU 68 67 67 GLU GLU X . n A 1 69 CYS 69 68 68 CYS CYS X . n A 1 70 ASP 70 69 69 ASP ASP X . n A 1 71 PHE 71 70 70 PHE PHE X . n A 1 72 GLN 72 71 71 GLN GLN X . n A 1 73 GLU 73 72 72 GLU GLU X . n A 1 74 PHE 74 73 73 PHE PHE X . n A 1 75 MET 75 74 74 MET MET X . n A 1 76 ALA 76 75 75 ALA ALA X . n A 1 77 PHE 77 76 76 PHE PHE X . n A 1 78 VAL 78 77 77 VAL VAL X . n A 1 79 ALA 79 78 78 ALA ALA X . n A 1 80 MET 80 79 79 MET MET X . n A 1 81 ILE 81 80 80 ILE ILE X . n A 1 82 THR 82 81 81 THR THR X . n A 1 83 THR 83 82 82 THR THR X . n A 1 84 ALA 84 83 83 ALA ALA X . n A 1 85 CYS 85 84 84 CYS CYS X . n A 1 86 HIS 86 85 85 HIS HIS X . n A 1 87 GLU 87 86 86 GLU GLU X . n A 1 88 PHE 88 87 87 PHE PHE X . n A 1 89 PHE 89 88 88 PHE PHE X . n A 1 90 GLU 90 89 89 GLU GLU X . n A 1 91 HIS 91 90 ? ? ? X . n A 1 92 GLU 92 91 ? ? ? X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 92 90 CA CA X . C 2 CA 1 93 91 CA CA X . D 3 53A 1 94 1 53A 53A X . E 4 HOH 1 95 1 HOH HOH X . E 4 HOH 2 96 2 HOH HOH X . E 4 HOH 3 97 3 HOH HOH X . E 4 HOH 4 98 4 HOH HOH X . E 4 HOH 5 99 5 HOH HOH X . E 4 HOH 6 100 6 HOH HOH X . E 4 HOH 7 101 7 HOH HOH X . E 4 HOH 8 102 8 HOH HOH X . E 4 HOH 9 103 9 HOH HOH X . E 4 HOH 10 104 10 HOH HOH X . E 4 HOH 11 105 11 HOH HOH X . E 4 HOH 12 106 12 HOH HOH X . E 4 HOH 13 107 13 HOH HOH X . E 4 HOH 14 108 14 HOH HOH X . E 4 HOH 15 109 15 HOH HOH X . E 4 HOH 16 110 16 HOH HOH X . E 4 HOH 17 111 17 HOH HOH X . E 4 HOH 18 112 19 HOH HOH X . E 4 HOH 19 113 21 HOH HOH X . E 4 HOH 20 114 22 HOH HOH X . E 4 HOH 21 115 23 HOH HOH X . E 4 HOH 22 116 24 HOH HOH X . E 4 HOH 23 117 25 HOH HOH X . E 4 HOH 24 118 26 HOH HOH X . E 4 HOH 25 119 27 HOH HOH X . E 4 HOH 26 120 28 HOH HOH X . E 4 HOH 27 121 29 HOH HOH X . E 4 HOH 28 122 30 HOH HOH X . E 4 HOH 29 123 31 HOH HOH X . E 4 HOH 30 124 32 HOH HOH X . E 4 HOH 31 125 33 HOH HOH X . E 4 HOH 32 126 34 HOH HOH X . E 4 HOH 33 127 35 HOH HOH X . E 4 HOH 34 128 36 HOH HOH X . E 4 HOH 35 129 37 HOH HOH X . E 4 HOH 36 130 38 HOH HOH X . E 4 HOH 37 131 39 HOH HOH X . E 4 HOH 38 132 40 HOH HOH X . E 4 HOH 39 133 41 HOH HOH X . E 4 HOH 40 134 42 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A GLU 22 ? X GLU 21 ? 1_555 102.9 ? 2 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A ASP 24 ? X ASP 23 ? 1_555 85.4 ? 3 O ? A GLU 22 ? X GLU 21 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A ASP 24 ? X ASP 23 ? 1_555 84.6 ? 4 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A LYS 27 ? X LYS 26 ? 1_555 88.6 ? 5 O ? A GLU 22 ? X GLU 21 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A LYS 27 ? X LYS 26 ? 1_555 157.5 ? 6 O ? A ASP 24 ? X ASP 23 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? A LYS 27 ? X LYS 26 ? 1_555 77.0 ? 7 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 97.2 ? 8 O ? A GLU 22 ? X GLU 21 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 118.3 ? 9 O ? A ASP 24 ? X ASP 23 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 155.3 ? 10 O ? A LYS 27 ? X LYS 26 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 78.5 ? 11 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 78.9 ? 12 O ? A GLU 22 ? X GLU 21 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 77.1 ? 13 O ? A ASP 24 ? X ASP 23 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 152.5 ? 14 O ? A LYS 27 ? X LYS 26 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 124.5 ? 15 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 50.6 ? 16 O ? A SER 19 ? X SER 18 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 167.4 ? 17 O ? A GLU 22 ? X GLU 21 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 81.8 ? 18 O ? A ASP 24 ? X ASP 23 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 83.4 ? 19 O ? A LYS 27 ? X LYS 26 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 83.3 ? 20 OE1 ? A GLU 32 ? X GLU 31 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 90.7 ? 21 OE2 ? A GLU 32 ? X GLU 31 ? 1_555 CA ? B CA . ? X CA 92 ? 1_555 O ? E HOH . ? X HOH 117 ? 1_555 113.7 ? 22 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 88.6 ? 23 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 84.8 ? 24 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 77.0 ? 25 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? A GLU 68 ? X GLU 67 ? 1_555 81.4 ? 26 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? A GLU 68 ? X GLU 67 ? 1_555 158.1 ? 27 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? A GLU 68 ? X GLU 67 ? 1_555 82.8 ? 28 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 115.1 ? 29 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 122.9 ? 30 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 150.2 ? 31 O ? A GLU 68 ? X GLU 67 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 78.9 ? 32 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 90.7 ? 33 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 80.6 ? 34 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 157.2 ? 35 O ? A GLU 68 ? X GLU 67 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 118.7 ? 36 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 50.2 ? 37 OD1 ? A ASP 62 ? X ASP 61 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 166.5 ? 38 OD1 ? A ASP 64 ? X ASP 63 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 85.7 ? 39 OD1 ? A ASP 66 ? X ASP 65 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 82.0 ? 40 O ? A GLU 68 ? X GLU 67 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 99.6 ? 41 OE1 ? A GLU 73 ? X GLU 72 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 78.2 ? 42 OE2 ? A GLU 73 ? X GLU 72 ? 1_555 CA ? C CA . ? X CA 93 ? 1_555 O ? E HOH . ? X HOH 113 ? 1_555 100.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 3.2547 5.5600 -2.4199 -0.1775 -0.0695 -0.0257 0.0426 0.0391 0.0247 24.7486 33.6801 9.3223 -3.2790 -3.1047 10.3868 0.0441 0.3986 -0.4426 -1.2657 0.3560 -2.0300 0.0236 -0.2365 0.7587 'X-RAY DIFFRACTION' 2 ? refined -1.7155 -5.6025 -6.7581 0.0466 -0.1262 -0.2168 0.0773 0.0143 0.0077 5.1265 57.2179 0.2547 11.0537 -0.1935 2.4563 -0.2051 0.1920 0.0130 0.2758 -0.1533 -0.5973 -1.2383 0.1282 0.2594 'X-RAY DIFFRACTION' 3 ? refined -5.4413 -16.4793 -4.8671 -0.0522 -0.1795 -0.1630 0.0061 -0.0165 -0.0270 7.0384 6.6914 6.6023 -0.3689 0.6257 -0.0646 -0.0681 0.0539 0.0142 0.4856 -0.4584 0.0234 -0.7102 0.5881 -0.0075 'X-RAY DIFFRACTION' 4 ? refined -10.4705 -17.1980 5.4103 -0.0682 -0.1558 -0.1316 -0.0165 0.0367 -0.0282 8.4448 6.8593 4.8117 2.1859 2.1908 -0.7480 0.2063 -0.1976 -0.0087 -0.3437 -0.0340 0.5282 0.4743 0.4613 -0.1837 'X-RAY DIFFRACTION' 5 ? refined -12.6237 -8.6122 -3.4917 -0.1516 -0.1712 -0.0406 0.0174 -0.0720 0.0258 5.3273 15.6196 12.5952 5.4898 2.4452 8.0371 -0.0562 0.3182 -0.2620 0.4020 0.1435 0.4363 -0.8102 -0.2044 -0.2012 'X-RAY DIFFRACTION' 6 ? refined -7.1810 -1.6476 12.2504 -0.0022 -0.0568 0.0105 0.0324 0.0334 0.0213 8.2611 8.8860 37.6814 -5.1498 8.8647 6.7376 -0.2095 0.4621 -0.2526 -0.8099 0.2660 -0.1791 1.0238 -0.2251 0.5464 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 X X 5 ? 1 . . . . 'X-RAY DIFFRACTION' ? 2 2 X X 16 ? 6 . . . . 'X-RAY DIFFRACTION' ? 3 3 X X 40 ? 17 . . . . 'X-RAY DIFFRACTION' ? 4 4 X X 63 ? 41 . . . . 'X-RAY DIFFRACTION' ? 5 5 X X 78 ? 64 . . . . 'X-RAY DIFFRACTION' ? 6 6 X X 88 ? 79 . . . . 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 3GK4 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.240 _pdbx_phasing_MR.d_res_low_rotation 32.160 _pdbx_phasing_MR.d_res_high_translation 2.240 _pdbx_phasing_MR.d_res_low_translation 32.160 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 X _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 41 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 X _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 132 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X HIS 90 ? A HIS 91 2 1 Y 1 X GLU 91 ? A GLU 92 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 53A N1 N N N 1 53A N3 N N N 2 53A C4 C N N 3 53A C5 C Y N 4 53A C6 C Y N 5 53A O2 O N N 6 53A N4 N N N 7 53A O3 O N N 8 53A C10 C N N 9 53A C13 C N N 10 53A C7 C N R 11 53A C9 C N N 12 53A O5 O N N 13 53A C15 C N N 14 53A C19 C N N 15 53A S1 S N N 16 53A N2 N N N 17 53A C11 C Y N 18 53A C16 C Y N 19 53A C17 C Y N 20 53A C12 C Y N 21 53A C3 C N N 22 53A C1 C N N 23 53A C8 C N N 24 53A O1 O N N 25 53A O4 O N N 26 53A C14 C N N 27 53A C18 C N N 28 53A HN3 H N N 29 53A HN4 H N N 30 53A H13 H N N 31 53A H13A H N N 32 53A H13B H N N 33 53A H7 H N N 34 53A H15 H N N 35 53A H15A H N N 36 53A H19 H N N 37 53A H19A H N N 38 53A H19B H N N 39 53A H11 H N N 40 53A H16 H N N 41 53A H17 H N N 42 53A H12 H N N 43 53A H14 H N N 44 53A H14A H N N 45 53A H18 H N N 46 53A H18A H N N 47 53A H18B H N N 48 ALA N N N N 49 ALA CA C N S 50 ALA C C N N 51 ALA O O N N 52 ALA CB C N N 53 ALA OXT O N N 54 ALA H H N N 55 ALA H2 H N N 56 ALA HA H N N 57 ALA HB1 H N N 58 ALA HB2 H N N 59 ALA HB3 H N N 60 ALA HXT H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CA CA CA N N 122 CYS N N N N 123 CYS CA C N R 124 CYS C C N N 125 CYS O O N N 126 CYS CB C N N 127 CYS SG S N N 128 CYS OXT O N N 129 CYS H H N N 130 CYS H2 H N N 131 CYS HA H N N 132 CYS HB2 H N N 133 CYS HB3 H N N 134 CYS HG H N N 135 CYS HXT H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 SER N N N N 322 SER CA C N S 323 SER C C N N 324 SER O O N N 325 SER CB C N N 326 SER OG O N N 327 SER OXT O N N 328 SER H H N N 329 SER H2 H N N 330 SER HA H N N 331 SER HB2 H N N 332 SER HB3 H N N 333 SER HG H N N 334 SER HXT H N N 335 THR N N N N 336 THR CA C N S 337 THR C C N N 338 THR O O N N 339 THR CB C N R 340 THR OG1 O N N 341 THR CG2 C N N 342 THR OXT O N N 343 THR H H N N 344 THR H2 H N N 345 THR HA H N N 346 THR HB H N N 347 THR HG1 H N N 348 THR HG21 H N N 349 THR HG22 H N N 350 THR HG23 H N N 351 THR HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 53A N1 N3 sing N N 1 53A N1 C6 sing N N 2 53A N1 C1 sing N N 3 53A N3 N4 sing N N 4 53A C4 C5 sing N N 5 53A C4 S1 sing N N 6 53A C4 N2 doub N N 7 53A C5 C6 doub Y N 8 53A C5 C11 sing Y N 9 53A C6 C12 sing Y N 10 53A O2 C9 doub N N 11 53A N4 C3 sing N N 12 53A O3 C10 doub N N 13 53A C10 C13 sing N N 14 53A C10 C7 sing N N 15 53A C7 C9 sing N N 16 53A C7 S1 sing N N 17 53A C9 O5 sing N N 18 53A O5 C15 sing N N 19 53A C15 C19 sing N N 20 53A N2 C1 sing N N 21 53A C11 C16 doub Y N 22 53A C16 C17 sing Y N 23 53A C17 C12 doub Y N 24 53A C3 C1 doub N N 25 53A C3 C8 sing N N 26 53A C8 O1 doub N N 27 53A C8 O4 sing N N 28 53A O4 C14 sing N N 29 53A C14 C18 sing N N 30 53A N3 HN3 sing N N 31 53A N4 HN4 sing N N 32 53A C13 H13 sing N N 33 53A C13 H13A sing N N 34 53A C13 H13B sing N N 35 53A C7 H7 sing N N 36 53A C15 H15 sing N N 37 53A C15 H15A sing N N 38 53A C19 H19 sing N N 39 53A C19 H19A sing N N 40 53A C19 H19B sing N N 41 53A C11 H11 sing N N 42 53A C16 H16 sing N N 43 53A C17 H17 sing N N 44 53A C12 H12 sing N N 45 53A C14 H14 sing N N 46 53A C14 H14A sing N N 47 53A C18 H18 sing N N 48 53A C18 H18A sing N N 49 53A C18 H18B sing N N 50 ALA N CA sing N N 51 ALA N H sing N N 52 ALA N H2 sing N N 53 ALA CA C sing N N 54 ALA CA CB sing N N 55 ALA CA HA sing N N 56 ALA C O doub N N 57 ALA C OXT sing N N 58 ALA CB HB1 sing N N 59 ALA CB HB2 sing N N 60 ALA CB HB3 sing N N 61 ALA OXT HXT sing N N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TYR N CA sing N N 339 TYR N H sing N N 340 TYR N H2 sing N N 341 TYR CA C sing N N 342 TYR CA CB sing N N 343 TYR CA HA sing N N 344 TYR C O doub N N 345 TYR C OXT sing N N 346 TYR CB CG sing N N 347 TYR CB HB2 sing N N 348 TYR CB HB3 sing N N 349 TYR CG CD1 doub Y N 350 TYR CG CD2 sing Y N 351 TYR CD1 CE1 sing Y N 352 TYR CD1 HD1 sing N N 353 TYR CD2 CE2 doub Y N 354 TYR CD2 HD2 sing N N 355 TYR CE1 CZ doub Y N 356 TYR CE1 HE1 sing N N 357 TYR CE2 CZ sing Y N 358 TYR CE2 HE2 sing N N 359 TYR CZ OH sing N N 360 TYR OH HH sing N N 361 TYR OXT HXT sing N N 362 VAL N CA sing N N 363 VAL N H sing N N 364 VAL N H2 sing N N 365 VAL CA C sing N N 366 VAL CA CB sing N N 367 VAL CA HA sing N N 368 VAL C O doub N N 369 VAL C OXT sing N N 370 VAL CB CG1 sing N N 371 VAL CB CG2 sing N N 372 VAL CB HB sing N N 373 VAL CG1 HG11 sing N N 374 VAL CG1 HG12 sing N N 375 VAL CG1 HG13 sing N N 376 VAL CG2 HG21 sing N N 377 VAL CG2 HG22 sing N N 378 VAL CG2 HG23 sing N N 379 VAL OXT HXT sing N N 380 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'ethyl 5-{[(1R)-1-(ethoxycarbonyl)-2-oxopropyl]sulfanyl}-1,2-dihydro[1,2,3]triazolo[1,5-a]quinazoline-3-carboxylate' 53A 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MHO _pdbx_initial_refinement_model.details 'PDB ENTRY 1MHO' #