data_3GKM # _entry.id 3GKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GKM pdb_00003gkm 10.2210/pdb3gkm/pdb RCSB RCSB051978 ? ? WWPDB D_1000051978 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GKK . unspecified PDB 3GKN . unspecified # _pdbx_database_status.entry_id 3GKM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-03-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Liao, S.-J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 390 _citation.page_first 951 _citation.page_last 966 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19477183 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.05.030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liao, S.-J.' 1 ? primary 'Yang, C.-Y.' 2 ? primary 'Chin, K.-H.' 3 ? primary 'Wang, A.H.-J.' 4 ? primary 'Chou, S.-H.' 5 ? # _cell.length_a 35.397 _cell.length_b 51.421 _cell.length_c 39.844 _cell.angle_alpha 90 _cell.angle_beta 103.243 _cell.angle_gamma 90 _cell.entry_id 3GKM _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3GKM _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bacterioferritin comigratory protein' 17539.896 1 1.11.1.15 'C48S, C84S' ? ? 2 non-polymer syn 'FORMIC ACID' 46.025 12 ? ? ? ? 3 water nat water 18.015 247 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAMTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSV KSHDNFSAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH AKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSV KSHDNFSAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH AKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 THR n 1 6 ASP n 1 7 ALA n 1 8 VAL n 1 9 LEU n 1 10 GLU n 1 11 LEU n 1 12 PRO n 1 13 ALA n 1 14 ALA n 1 15 THR n 1 16 PHE n 1 17 ASP n 1 18 LEU n 1 19 PRO n 1 20 LEU n 1 21 SER n 1 22 LEU n 1 23 SER n 1 24 GLY n 1 25 GLY n 1 26 THR n 1 27 GLN n 1 28 THR n 1 29 THR n 1 30 LEU n 1 31 ARG n 1 32 ALA n 1 33 HIS n 1 34 ALA n 1 35 GLY n 1 36 HIS n 1 37 TRP n 1 38 LEU n 1 39 VAL n 1 40 ILE n 1 41 TYR n 1 42 PHE n 1 43 TYR n 1 44 PRO n 1 45 LYS n 1 46 ASP n 1 47 SER n 1 48 THR n 1 49 PRO n 1 50 GLY n 1 51 SER n 1 52 THR n 1 53 THR n 1 54 GLU n 1 55 GLY n 1 56 LEU n 1 57 ASP n 1 58 PHE n 1 59 ASN n 1 60 ALA n 1 61 LEU n 1 62 LEU n 1 63 PRO n 1 64 GLU n 1 65 PHE n 1 66 ASP n 1 67 LYS n 1 68 ALA n 1 69 GLY n 1 70 ALA n 1 71 LYS n 1 72 ILE n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 SER n 1 77 ARG n 1 78 ASP n 1 79 SER n 1 80 VAL n 1 81 LYS n 1 82 SER n 1 83 HIS n 1 84 ASP n 1 85 ASN n 1 86 PHE n 1 87 SER n 1 88 ALA n 1 89 LYS n 1 90 GLN n 1 91 GLY n 1 92 PHE n 1 93 ALA n 1 94 PHE n 1 95 PRO n 1 96 LEU n 1 97 VAL n 1 98 SER n 1 99 ASP n 1 100 GLY n 1 101 ASP n 1 102 GLU n 1 103 ALA n 1 104 LEU n 1 105 CYS n 1 106 ARG n 1 107 ALA n 1 108 PHE n 1 109 ASP n 1 110 VAL n 1 111 ILE n 1 112 LYS n 1 113 GLU n 1 114 LYS n 1 115 ASN n 1 116 MET n 1 117 TYR n 1 118 GLY n 1 119 LYS n 1 120 GLN n 1 121 VAL n 1 122 LEU n 1 123 GLY n 1 124 ILE n 1 125 GLU n 1 126 ARG n 1 127 SER n 1 128 THR n 1 129 PHE n 1 130 LEU n 1 131 LEU n 1 132 SER n 1 133 PRO n 1 134 GLU n 1 135 GLY n 1 136 GLN n 1 137 VAL n 1 138 VAL n 1 139 GLN n 1 140 ALA n 1 141 TRP n 1 142 ARG n 1 143 LYS n 1 144 VAL n 1 145 LYS n 1 146 VAL n 1 147 ALA n 1 148 GLY n 1 149 HIS n 1 150 ALA n 1 151 ASP n 1 152 ALA n 1 153 VAL n 1 154 LEU n 1 155 ALA n 1 156 ALA n 1 157 LEU n 1 158 LYS n 1 159 ALA n 1 160 HIS n 1 161 ALA n 1 162 LYS n 1 163 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BCP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 17 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xanthomonas campestris pv. campestris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 340 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8P9V9_XANCP _struct_ref.pdbx_db_accession Q8P9V9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSH DNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAHAKQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GKM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 163 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8P9V9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 160 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 160 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GKM SER A 1 ? UNP Q8P9V9 ? ? 'expression tag' -2 1 1 3GKM ASN A 2 ? UNP Q8P9V9 ? ? 'expression tag' -1 2 1 3GKM ALA A 3 ? UNP Q8P9V9 ? ? 'expression tag' 0 3 1 3GKM SER A 51 ? UNP Q8P9V9 CYS 48 'engineered mutation' 48 4 1 3GKM SER A 87 ? UNP Q8P9V9 CYS 84 'engineered mutation' 84 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GKM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '36% PEG 4000, 0.1M cacodylate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-02-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength 1.00000 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3GKM _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.530 _reflns.number_obs 20772 _reflns.number_all ? _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs 0.03300 _reflns.pdbx_Rsym_value 0.03300 _reflns.pdbx_netI_over_sigmaI 37.9080 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.53 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 96.6 _reflns_shell.Rmerge_I_obs 0.12700 _reflns_shell.pdbx_Rsym_value 0.12700 _reflns_shell.meanI_over_sigI_obs 10.836 _reflns_shell.pdbx_redundancy 3.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3GKM _refine.ls_number_reflns_obs 19523 _refine.ls_number_reflns_all 20517 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.25 _refine.ls_d_res_high 1.53 _refine.ls_percent_reflns_obs 97.9 _refine.ls_R_factor_obs 0.170 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.170 _refine.ls_R_factor_R_free 0.188 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 994 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 11.44 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3GKK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1193 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 1476 _refine_hist.d_res_high 1.53 _refine_hist.d_res_low 23.25 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.004189 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.26881 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.022 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 1.575 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.845 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.577 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.53 _refine_ls_shell.d_res_low 1.58 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 96.6 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file protein_rep.param _pdbx_xplor_file.topol_file protein_rep.top # _struct.entry_id 3GKM _struct.title ;Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GKM _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Xanthomonas campestris, Bcp, Prx, Atypical 2-Cys, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? LEU A 18 ? PRO A 9 LEU A 15 5 ? 7 HELX_P HELX_P2 2 LEU A 30 ? ALA A 34 ? LEU A 27 ALA A 31 5 ? 5 HELX_P HELX_P3 3 THR A 48 ? LEU A 61 ? THR A 45 LEU A 58 1 ? 14 HELX_P HELX_P4 4 LEU A 61 ? ALA A 68 ? LEU A 58 ALA A 65 1 ? 8 HELX_P HELX_P5 5 SER A 79 ? GLY A 91 ? SER A 76 GLY A 88 1 ? 13 HELX_P HELX_P6 6 GLU A 102 ? PHE A 108 ? GLU A 99 PHE A 105 1 ? 7 HELX_P HELX_P7 7 GLY A 148 ? LYS A 162 ? GLY A 145 LYS A 159 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 27 ? THR A 28 ? GLN A 24 THR A 25 A 2 LEU A 20 ? LEU A 22 ? LEU A 17 LEU A 19 A 3 LEU A 96 ? SER A 98 ? LEU A 93 SER A 95 A 4 LYS A 71 ? SER A 76 ? LYS A 68 SER A 73 A 5 LEU A 38 ? PHE A 42 ? LEU A 35 PHE A 39 A 6 SER A 127 ? LEU A 131 ? SER A 124 LEU A 128 A 7 VAL A 137 ? ARG A 142 ? VAL A 134 ARG A 139 B 1 ILE A 111 ? MET A 116 ? ILE A 108 MET A 113 B 2 LYS A 119 ? ILE A 124 ? LYS A 116 ILE A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 28 ? O THR A 25 N LEU A 20 ? N LEU A 17 A 2 3 N SER A 21 ? N SER A 18 O SER A 98 ? O SER A 95 A 3 4 O VAL A 97 ? O VAL A 94 N GLY A 74 ? N GLY A 71 A 4 5 O LYS A 71 ? O LYS A 68 N VAL A 39 ? N VAL A 36 A 5 6 N PHE A 42 ? N PHE A 39 O SER A 127 ? O SER A 124 A 6 7 N THR A 128 ? N THR A 125 O TRP A 141 ? O TRP A 138 B 1 2 N LYS A 114 ? N LYS A 111 O VAL A 121 ? O VAL A 118 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMT 408 ? 2 'BINDING SITE FOR RESIDUE FMT A 408' AC2 Software A FMT 409 ? 5 'BINDING SITE FOR RESIDUE FMT A 409' AC3 Software A FMT 410 ? 5 'BINDING SITE FOR RESIDUE FMT A 410' AC4 Software A FMT 411 ? 6 'BINDING SITE FOR RESIDUE FMT A 411' AC5 Software A FMT 412 ? 3 'BINDING SITE FOR RESIDUE FMT A 412' AC6 Software A FMT 413 ? 4 'BINDING SITE FOR RESIDUE FMT A 413' AC7 Software A FMT 414 ? 6 'BINDING SITE FOR RESIDUE FMT A 414' AC8 Software A FMT 415 ? 5 'BINDING SITE FOR RESIDUE FMT A 415' AC9 Software A FMT 416 ? 4 'BINDING SITE FOR RESIDUE FMT A 416' BC1 Software A FMT 417 ? 4 'BINDING SITE FOR RESIDUE FMT A 417' BC2 Software A FMT 418 ? 3 'BINDING SITE FOR RESIDUE FMT A 418' BC3 Software A FMT 419 ? 4 'BINDING SITE FOR RESIDUE FMT A 419' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ALA A 93 ? ALA A 90 . ? 1_555 ? 2 AC1 2 HOH N . ? HOH A 391 . ? 1_555 ? 3 AC2 5 VAL A 8 ? VAL A 5 . ? 1_555 ? 4 AC2 5 LEU A 9 ? LEU A 6 . ? 1_555 ? 5 AC2 5 ALA A 140 ? ALA A 137 . ? 1_555 ? 6 AC2 5 ARG A 142 ? ARG A 139 . ? 1_555 ? 7 AC2 5 HOH N . ? HOH A 347 . ? 1_555 ? 8 AC3 5 SER A 21 ? SER A 18 . ? 1_555 ? 9 AC3 5 SER A 98 ? SER A 95 . ? 1_555 ? 10 AC3 5 GLY A 100 ? GLY A 97 . ? 1_555 ? 11 AC3 5 HOH N . ? HOH A 269 . ? 1_555 ? 12 AC3 5 FMT I . ? FMT A 415 . ? 1_555 ? 13 AC4 6 PRO A 44 ? PRO A 41 . ? 1_555 ? 14 AC4 6 LYS A 45 ? LYS A 42 . ? 1_555 ? 15 AC4 6 THR A 48 ? THR A 45 . ? 1_555 ? 16 AC4 6 SER A 51 ? SER A 48 . ? 1_555 ? 17 AC4 6 ARG A 126 ? ARG A 123 . ? 1_555 ? 18 AC4 6 HOH N . ? HOH A 396 . ? 1_555 ? 19 AC5 3 ALA A 13 ? ALA A 10 . ? 1_555 ? 20 AC5 3 HOH N . ? HOH A 201 . ? 1_555 ? 21 AC5 3 FMT G . ? FMT A 413 . ? 1_555 ? 22 AC6 4 PRO A 12 ? PRO A 9 . ? 1_555 ? 23 AC6 4 ALA A 13 ? ALA A 10 . ? 1_555 ? 24 AC6 4 HOH N . ? HOH A 240 . ? 1_555 ? 25 AC6 4 FMT F . ? FMT A 412 . ? 1_555 ? 26 AC7 6 ALA A 140 ? ALA A 137 . ? 1_555 ? 27 AC7 6 HOH N . ? HOH A 174 . ? 1_555 ? 28 AC7 6 HOH N . ? HOH A 220 . ? 1_555 ? 29 AC7 6 HOH N . ? HOH A 244 . ? 1_655 ? 30 AC7 6 HOH N . ? HOH A 288 . ? 1_555 ? 31 AC7 6 HOH N . ? HOH A 366 . ? 1_555 ? 32 AC8 5 SER A 79 ? SER A 76 . ? 1_555 ? 33 AC8 5 HOH N . ? HOH A 165 . ? 1_555 ? 34 AC8 5 HOH N . ? HOH A 297 . ? 1_555 ? 35 AC8 5 HOH N . ? HOH A 394 . ? 1_555 ? 36 AC8 5 FMT D . ? FMT A 410 . ? 1_555 ? 37 AC9 4 LEU A 9 ? LEU A 6 . ? 1_555 ? 38 AC9 4 GLU A 10 ? GLU A 7 . ? 1_555 ? 39 AC9 4 HOH N . ? HOH A 320 . ? 1_555 ? 40 AC9 4 HOH N . ? HOH A 331 . ? 1_655 ? 41 BC1 4 SER A 23 ? SER A 20 . ? 1_555 ? 42 BC1 4 PRO A 95 ? PRO A 92 . ? 1_555 ? 43 BC1 4 HOH N . ? HOH A 233 . ? 1_555 ? 44 BC1 4 HOH N . ? HOH A 393 . ? 1_555 ? 45 BC2 3 ALA A 32 ? ALA A 29 . ? 1_555 ? 46 BC2 3 HIS A 36 ? HIS A 33 . ? 1_555 ? 47 BC2 3 HOH N . ? HOH A 276 . ? 1_555 ? 48 BC3 4 GLU A 102 ? GLU A 99 . ? 1_555 ? 49 BC3 4 LEU A 122 ? LEU A 119 . ? 1_555 ? 50 BC3 4 GLY A 123 ? GLY A 120 . ? 1_555 ? 51 BC3 4 HOH N . ? HOH A 401 . ? 1_555 ? # _atom_sites.entry_id 3GKM _atom_sites.fract_transf_matrix[1][1] 0.028251 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006649 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019447 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025784 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 THR 5 2 ? ? ? A . n A 1 6 ASP 6 3 3 ASP ASP A . n A 1 7 ALA 7 4 4 ALA ALA A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 GLU 10 7 7 GLU GLU A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 PRO 12 9 9 PRO PRO A . n A 1 13 ALA 13 10 10 ALA ALA A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 ASP 17 14 14 ASP ASP A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 PRO 19 16 16 PRO PRO A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 SER 21 18 18 SER SER A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 GLY 25 22 22 GLY GLY A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ARG 31 28 28 ARG ARG A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 HIS 33 30 30 HIS HIS A . n A 1 34 ALA 34 31 31 ALA ALA A . n A 1 35 GLY 35 32 32 GLY GLY A . n A 1 36 HIS 36 33 33 HIS HIS A . n A 1 37 TRP 37 34 34 TRP TRP A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 VAL 39 36 36 VAL VAL A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 TYR 41 38 38 TYR TYR A . n A 1 42 PHE 42 39 39 PHE PHE A . n A 1 43 TYR 43 40 40 TYR TYR A . n A 1 44 PRO 44 41 41 PRO PRO A . n A 1 45 LYS 45 42 42 LYS LYS A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 THR 48 45 45 THR THR A . n A 1 49 PRO 49 46 46 PRO PRO A . n A 1 50 GLY 50 47 47 GLY GLY A . n A 1 51 SER 51 48 48 SER SER A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 THR 53 50 50 THR THR A . n A 1 54 GLU 54 51 51 GLU GLU A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 ASP 57 54 54 ASP ASP A . n A 1 58 PHE 58 55 55 PHE PHE A . n A 1 59 ASN 59 56 56 ASN ASN A . n A 1 60 ALA 60 57 57 ALA ALA A . n A 1 61 LEU 61 58 58 LEU LEU A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 PRO 63 60 60 PRO PRO A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 PHE 65 62 62 PHE PHE A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 ALA 70 67 67 ALA ALA A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 GLY 74 71 71 GLY GLY A . n A 1 75 VAL 75 72 72 VAL VAL A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 ASP 78 75 75 ASP ASP A . n A 1 79 SER 79 76 76 SER SER A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 LYS 81 78 78 LYS LYS A . n A 1 82 SER 82 79 79 SER SER A . n A 1 83 HIS 83 80 80 HIS HIS A . n A 1 84 ASP 84 81 81 ASP ASP A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 PHE 86 83 83 PHE PHE A . n A 1 87 SER 87 84 84 SER SER A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 GLN 90 87 87 GLN GLN A . n A 1 91 GLY 91 88 88 GLY GLY A . n A 1 92 PHE 92 89 89 PHE PHE A . n A 1 93 ALA 93 90 90 ALA ALA A . n A 1 94 PHE 94 91 91 PHE PHE A . n A 1 95 PRO 95 92 92 PRO PRO A . n A 1 96 LEU 96 93 93 LEU LEU A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 ASP 99 96 96 ASP ASP A . n A 1 100 GLY 100 97 97 GLY GLY A . n A 1 101 ASP 101 98 98 ASP ASP A . n A 1 102 GLU 102 99 99 GLU GLU A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 LEU 104 101 101 LEU LEU A . n A 1 105 CYS 105 102 102 CYS CYS A . n A 1 106 ARG 106 103 103 ARG ARG A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 PHE 108 105 105 PHE PHE A . n A 1 109 ASP 109 106 106 ASP ASP A . n A 1 110 VAL 110 107 107 VAL VAL A . n A 1 111 ILE 111 108 108 ILE ILE A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 GLU 113 110 110 GLU GLU A . n A 1 114 LYS 114 111 111 LYS LYS A . n A 1 115 ASN 115 112 112 ASN ASN A . n A 1 116 MET 116 113 113 MET MET A . n A 1 117 TYR 117 114 114 TYR TYR A . n A 1 118 GLY 118 115 115 GLY GLY A . n A 1 119 LYS 119 116 116 LYS LYS A . n A 1 120 GLN 120 117 117 GLN GLN A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 GLY 123 120 120 GLY GLY A . n A 1 124 ILE 124 121 121 ILE ILE A . n A 1 125 GLU 125 122 122 GLU GLU A . n A 1 126 ARG 126 123 123 ARG ARG A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 THR 128 125 125 THR THR A . n A 1 129 PHE 129 126 126 PHE PHE A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 LEU 131 128 128 LEU LEU A . n A 1 132 SER 132 129 129 SER SER A . n A 1 133 PRO 133 130 130 PRO PRO A . n A 1 134 GLU 134 131 131 GLU GLU A . n A 1 135 GLY 135 132 132 GLY GLY A . n A 1 136 GLN 136 133 133 GLN GLN A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 VAL 138 135 135 VAL VAL A . n A 1 139 GLN 139 136 136 GLN GLN A . n A 1 140 ALA 140 137 137 ALA ALA A . n A 1 141 TRP 141 138 138 TRP TRP A . n A 1 142 ARG 142 139 139 ARG ARG A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 VAL 144 141 141 VAL VAL A . n A 1 145 LYS 145 142 142 LYS LYS A . n A 1 146 VAL 146 143 143 VAL VAL A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 GLY 148 145 145 GLY GLY A . n A 1 149 HIS 149 146 146 HIS HIS A . n A 1 150 ALA 150 147 147 ALA ALA A . n A 1 151 ASP 151 148 148 ASP ASP A . n A 1 152 ALA 152 149 149 ALA ALA A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 ALA 155 152 152 ALA ALA A . n A 1 156 ALA 156 153 153 ALA ALA A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 LYS 158 155 155 LYS LYS A . n A 1 159 ALA 159 156 156 ALA ALA A . n A 1 160 HIS 160 157 157 HIS HIS A . n A 1 161 ALA 161 158 158 ALA ALA A . n A 1 162 LYS 162 159 159 LYS LYS A . n A 1 163 GLN 163 160 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 408 408 FMT FMT A . C 2 FMT 1 409 409 FMT FMT A . D 2 FMT 1 410 410 FMT FMT A . E 2 FMT 1 411 411 FMT FMT A . F 2 FMT 1 412 412 FMT FMT A . G 2 FMT 1 413 413 FMT FMT A . H 2 FMT 1 414 414 FMT FMT A . I 2 FMT 1 415 415 FMT FMT A . J 2 FMT 1 416 416 FMT FMT A . K 2 FMT 1 417 417 FMT FMT A . L 2 FMT 1 418 418 FMT FMT A . M 2 FMT 1 419 419 FMT FMT A . N 3 HOH 1 161 161 HOH HOH A . N 3 HOH 2 162 162 HOH HOH A . N 3 HOH 3 163 163 HOH HOH A . N 3 HOH 4 164 164 HOH HOH A . N 3 HOH 5 165 165 HOH HOH A . N 3 HOH 6 166 166 HOH HOH A . N 3 HOH 7 167 167 HOH HOH A . N 3 HOH 8 168 168 HOH HOH A . N 3 HOH 9 169 169 HOH HOH A . N 3 HOH 10 170 170 HOH HOH A . N 3 HOH 11 171 171 HOH HOH A . N 3 HOH 12 172 172 HOH HOH A . N 3 HOH 13 173 173 HOH HOH A . N 3 HOH 14 174 174 HOH HOH A . N 3 HOH 15 175 175 HOH HOH A . N 3 HOH 16 176 176 HOH HOH A . N 3 HOH 17 177 177 HOH HOH A . N 3 HOH 18 178 178 HOH HOH A . N 3 HOH 19 179 179 HOH HOH A . N 3 HOH 20 180 180 HOH HOH A . N 3 HOH 21 181 181 HOH HOH A . N 3 HOH 22 182 182 HOH HOH A . N 3 HOH 23 183 183 HOH HOH A . N 3 HOH 24 184 184 HOH HOH A . N 3 HOH 25 185 185 HOH HOH A . N 3 HOH 26 186 186 HOH HOH A . N 3 HOH 27 187 187 HOH HOH A . N 3 HOH 28 188 188 HOH HOH A . N 3 HOH 29 189 189 HOH HOH A . N 3 HOH 30 190 190 HOH HOH A . N 3 HOH 31 191 191 HOH HOH A . N 3 HOH 32 192 192 HOH HOH A . N 3 HOH 33 193 193 HOH HOH A . N 3 HOH 34 194 194 HOH HOH A . N 3 HOH 35 195 195 HOH HOH A . N 3 HOH 36 196 196 HOH HOH A . N 3 HOH 37 197 197 HOH HOH A . N 3 HOH 38 198 198 HOH HOH A . N 3 HOH 39 199 199 HOH HOH A . N 3 HOH 40 200 200 HOH HOH A . N 3 HOH 41 201 201 HOH HOH A . N 3 HOH 42 202 202 HOH HOH A . N 3 HOH 43 203 203 HOH HOH A . N 3 HOH 44 204 204 HOH HOH A . N 3 HOH 45 205 205 HOH HOH A . N 3 HOH 46 206 206 HOH HOH A . N 3 HOH 47 207 207 HOH HOH A . N 3 HOH 48 208 208 HOH HOH A . N 3 HOH 49 209 209 HOH HOH A . N 3 HOH 50 210 210 HOH HOH A . N 3 HOH 51 211 211 HOH HOH A . N 3 HOH 52 212 212 HOH HOH A . N 3 HOH 53 213 213 HOH HOH A . N 3 HOH 54 214 214 HOH HOH A . N 3 HOH 55 215 215 HOH HOH A . N 3 HOH 56 216 216 HOH HOH A . N 3 HOH 57 217 217 HOH HOH A . N 3 HOH 58 218 218 HOH HOH A . N 3 HOH 59 219 219 HOH HOH A . N 3 HOH 60 220 220 HOH HOH A . N 3 HOH 61 221 221 HOH HOH A . N 3 HOH 62 222 222 HOH HOH A . N 3 HOH 63 223 223 HOH HOH A . N 3 HOH 64 224 224 HOH HOH A . N 3 HOH 65 225 225 HOH HOH A . N 3 HOH 66 226 226 HOH HOH A . N 3 HOH 67 227 227 HOH HOH A . N 3 HOH 68 228 228 HOH HOH A . N 3 HOH 69 229 229 HOH HOH A . N 3 HOH 70 230 230 HOH HOH A . N 3 HOH 71 231 231 HOH HOH A . N 3 HOH 72 232 232 HOH HOH A . N 3 HOH 73 233 233 HOH HOH A . N 3 HOH 74 234 234 HOH HOH A . N 3 HOH 75 235 235 HOH HOH A . N 3 HOH 76 236 236 HOH HOH A . N 3 HOH 77 237 237 HOH HOH A . N 3 HOH 78 238 238 HOH HOH A . N 3 HOH 79 239 239 HOH HOH A . N 3 HOH 80 240 240 HOH HOH A . N 3 HOH 81 241 241 HOH HOH A . N 3 HOH 82 242 242 HOH HOH A . N 3 HOH 83 243 243 HOH HOH A . N 3 HOH 84 244 244 HOH HOH A . N 3 HOH 85 245 245 HOH HOH A . N 3 HOH 86 246 246 HOH HOH A . N 3 HOH 87 247 247 HOH HOH A . N 3 HOH 88 248 248 HOH HOH A . N 3 HOH 89 249 249 HOH HOH A . N 3 HOH 90 250 250 HOH HOH A . N 3 HOH 91 251 251 HOH HOH A . N 3 HOH 92 252 252 HOH HOH A . N 3 HOH 93 253 253 HOH HOH A . N 3 HOH 94 254 254 HOH HOH A . N 3 HOH 95 255 255 HOH HOH A . N 3 HOH 96 256 256 HOH HOH A . N 3 HOH 97 257 257 HOH HOH A . N 3 HOH 98 258 258 HOH HOH A . N 3 HOH 99 259 259 HOH HOH A . N 3 HOH 100 260 260 HOH HOH A . N 3 HOH 101 261 261 HOH HOH A . N 3 HOH 102 262 262 HOH HOH A . N 3 HOH 103 263 263 HOH HOH A . N 3 HOH 104 264 264 HOH HOH A . N 3 HOH 105 265 265 HOH HOH A . N 3 HOH 106 266 266 HOH HOH A . N 3 HOH 107 267 267 HOH HOH A . N 3 HOH 108 268 268 HOH HOH A . N 3 HOH 109 269 269 HOH HOH A . N 3 HOH 110 270 270 HOH HOH A . N 3 HOH 111 271 271 HOH HOH A . N 3 HOH 112 272 272 HOH HOH A . N 3 HOH 113 273 273 HOH HOH A . N 3 HOH 114 274 274 HOH HOH A . N 3 HOH 115 275 275 HOH HOH A . N 3 HOH 116 276 276 HOH HOH A . N 3 HOH 117 277 277 HOH HOH A . N 3 HOH 118 278 278 HOH HOH A . N 3 HOH 119 279 279 HOH HOH A . N 3 HOH 120 280 280 HOH HOH A . N 3 HOH 121 281 281 HOH HOH A . N 3 HOH 122 282 282 HOH HOH A . N 3 HOH 123 283 283 HOH HOH A . N 3 HOH 124 284 284 HOH HOH A . N 3 HOH 125 285 285 HOH HOH A . N 3 HOH 126 286 286 HOH HOH A . N 3 HOH 127 287 287 HOH HOH A . N 3 HOH 128 288 288 HOH HOH A . N 3 HOH 129 289 289 HOH HOH A . N 3 HOH 130 290 290 HOH HOH A . N 3 HOH 131 291 291 HOH HOH A . N 3 HOH 132 292 292 HOH HOH A . N 3 HOH 133 293 293 HOH HOH A . N 3 HOH 134 294 294 HOH HOH A . N 3 HOH 135 295 295 HOH HOH A . N 3 HOH 136 296 296 HOH HOH A . N 3 HOH 137 297 297 HOH HOH A . N 3 HOH 138 298 298 HOH HOH A . N 3 HOH 139 299 299 HOH HOH A . N 3 HOH 140 300 300 HOH HOH A . N 3 HOH 141 301 301 HOH HOH A . N 3 HOH 142 302 302 HOH HOH A . N 3 HOH 143 303 303 HOH HOH A . N 3 HOH 144 304 304 HOH HOH A . N 3 HOH 145 305 305 HOH HOH A . N 3 HOH 146 306 306 HOH HOH A . N 3 HOH 147 307 307 HOH HOH A . N 3 HOH 148 308 308 HOH HOH A . N 3 HOH 149 309 309 HOH HOH A . N 3 HOH 150 310 310 HOH HOH A . N 3 HOH 151 311 311 HOH HOH A . N 3 HOH 152 312 312 HOH HOH A . N 3 HOH 153 313 313 HOH HOH A . N 3 HOH 154 314 314 HOH HOH A . N 3 HOH 155 315 315 HOH HOH A . N 3 HOH 156 316 316 HOH HOH A . N 3 HOH 157 317 317 HOH HOH A . N 3 HOH 158 318 318 HOH HOH A . N 3 HOH 159 319 319 HOH HOH A . N 3 HOH 160 320 320 HOH HOH A . N 3 HOH 161 321 321 HOH HOH A . N 3 HOH 162 322 322 HOH HOH A . N 3 HOH 163 323 323 HOH HOH A . N 3 HOH 164 324 324 HOH HOH A . N 3 HOH 165 325 325 HOH HOH A . N 3 HOH 166 326 326 HOH HOH A . N 3 HOH 167 327 327 HOH HOH A . N 3 HOH 168 328 328 HOH HOH A . N 3 HOH 169 329 329 HOH HOH A . N 3 HOH 170 330 330 HOH HOH A . N 3 HOH 171 331 331 HOH HOH A . N 3 HOH 172 332 332 HOH HOH A . N 3 HOH 173 333 333 HOH HOH A . N 3 HOH 174 334 334 HOH HOH A . N 3 HOH 175 335 335 HOH HOH A . N 3 HOH 176 336 336 HOH HOH A . N 3 HOH 177 337 337 HOH HOH A . N 3 HOH 178 338 338 HOH HOH A . N 3 HOH 179 339 339 HOH HOH A . N 3 HOH 180 340 340 HOH HOH A . N 3 HOH 181 341 341 HOH HOH A . N 3 HOH 182 342 342 HOH HOH A . N 3 HOH 183 343 343 HOH HOH A . N 3 HOH 184 344 344 HOH HOH A . N 3 HOH 185 345 345 HOH HOH A . N 3 HOH 186 346 346 HOH HOH A . N 3 HOH 187 347 347 HOH HOH A . N 3 HOH 188 348 348 HOH HOH A . N 3 HOH 189 349 349 HOH HOH A . N 3 HOH 190 350 350 HOH HOH A . N 3 HOH 191 351 351 HOH HOH A . N 3 HOH 192 352 352 HOH HOH A . N 3 HOH 193 353 353 HOH HOH A . N 3 HOH 194 354 354 HOH HOH A . N 3 HOH 195 355 355 HOH HOH A . N 3 HOH 196 356 356 HOH HOH A . N 3 HOH 197 357 357 HOH HOH A . N 3 HOH 198 358 358 HOH HOH A . N 3 HOH 199 359 359 HOH HOH A . N 3 HOH 200 360 360 HOH HOH A . N 3 HOH 201 361 361 HOH HOH A . N 3 HOH 202 362 362 HOH HOH A . N 3 HOH 203 363 363 HOH HOH A . N 3 HOH 204 364 364 HOH HOH A . N 3 HOH 205 365 365 HOH HOH A . N 3 HOH 206 366 366 HOH HOH A . N 3 HOH 207 367 367 HOH HOH A . N 3 HOH 208 368 368 HOH HOH A . N 3 HOH 209 369 369 HOH HOH A . N 3 HOH 210 370 370 HOH HOH A . N 3 HOH 211 371 371 HOH HOH A . N 3 HOH 212 372 372 HOH HOH A . N 3 HOH 213 373 373 HOH HOH A . N 3 HOH 214 374 374 HOH HOH A . N 3 HOH 215 375 375 HOH HOH A . N 3 HOH 216 376 376 HOH HOH A . N 3 HOH 217 377 377 HOH HOH A . N 3 HOH 218 378 378 HOH HOH A . N 3 HOH 219 379 379 HOH HOH A . N 3 HOH 220 380 380 HOH HOH A . N 3 HOH 221 381 381 HOH HOH A . N 3 HOH 222 382 382 HOH HOH A . N 3 HOH 223 383 383 HOH HOH A . N 3 HOH 224 384 384 HOH HOH A . N 3 HOH 225 385 385 HOH HOH A . N 3 HOH 226 386 386 HOH HOH A . N 3 HOH 227 387 387 HOH HOH A . N 3 HOH 228 388 388 HOH HOH A . N 3 HOH 229 389 389 HOH HOH A . N 3 HOH 230 390 390 HOH HOH A . N 3 HOH 231 391 391 HOH HOH A . N 3 HOH 232 392 392 HOH HOH A . N 3 HOH 233 393 393 HOH HOH A . N 3 HOH 234 394 394 HOH HOH A . N 3 HOH 235 395 395 HOH HOH A . N 3 HOH 236 396 396 HOH HOH A . N 3 HOH 237 397 397 HOH HOH A . N 3 HOH 238 398 398 HOH HOH A . N 3 HOH 239 399 399 HOH HOH A . N 3 HOH 240 400 400 HOH HOH A . N 3 HOH 241 401 401 HOH HOH A . N 3 HOH 242 402 402 HOH HOH A . N 3 HOH 243 403 403 HOH HOH A . N 3 HOH 244 404 404 HOH HOH A . N 3 HOH 245 405 405 HOH HOH A . N 3 HOH 246 406 406 HOH HOH A . N 3 HOH 247 407 407 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 MOLREP . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A THR 2 ? A THR 5 6 1 Y 1 A GLN 160 ? A GLN 163 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FMT C C N N 88 FMT O1 O N N 89 FMT O2 O N N 90 FMT H H N N 91 FMT HO2 H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FMT C O1 doub N N 83 FMT C O2 sing N N 84 FMT C H sing N N 85 FMT O2 HO2 sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GKK _pdbx_initial_refinement_model.details 'PDB ENTRY 3GKK' #