data_3GO4 # _entry.id 3GO4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GO4 pdb_00003go4 10.2210/pdb3go4/pdb RCSB RCSB052103 ? ? WWPDB D_1000052103 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GIW ;Crystal structure of Rossmann-fold protein of unknown function (DUF574) (NP_823353.1) from Streptomyces avermitilis MA-4680 at 1.45 A resolution ; unspecified TargetDB 381519 . unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3GO4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-03-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Rossmann-fold protein of unknown function (DUF574) (NP_823353.1) from Streptomyces avermitilis MA-4680 at 1.80 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3GO4 _cell.length_a 94.637 _cell.length_b 49.439 _cell.length_c 77.811 _cell.angle_alpha 90.000 _cell.angle_beta 123.800 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GO4 _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein of unknown function DUF574' 30700.152 1 ? ? ? ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 201 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)GGAALPDNGWPADRIDTESAHSARIYDYIIGGKDYYPADKEAGDA(MSE)SREWPALPVH(MSE)RANRDW (MSE)NRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEAD (MSE)LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLA(MSE)SIGTAEFAPQEVG RVAREYAARN(MSE)P(MSE)RLRTHAEAEEFFEGLELVEPGIVQVHKWHPDAATADGIRDEDIA(MSE)YGAVARKP ; _entity_poly.pdbx_seq_one_letter_code_can ;GMGGAALPDNGWPADRIDTESAHSARIYDYIIGGKDYYPADKEAGDAMSREWPALPVHMRANRDWMNRAVAHLAKEAGIR QFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTR PVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFEGLE LVEPGIVQVHKWHPDAATADGIRDEDIAMYGAVARKP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 381519 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLY n 1 4 GLY n 1 5 ALA n 1 6 ALA n 1 7 LEU n 1 8 PRO n 1 9 ASP n 1 10 ASN n 1 11 GLY n 1 12 TRP n 1 13 PRO n 1 14 ALA n 1 15 ASP n 1 16 ARG n 1 17 ILE n 1 18 ASP n 1 19 THR n 1 20 GLU n 1 21 SER n 1 22 ALA n 1 23 HIS n 1 24 SER n 1 25 ALA n 1 26 ARG n 1 27 ILE n 1 28 TYR n 1 29 ASP n 1 30 TYR n 1 31 ILE n 1 32 ILE n 1 33 GLY n 1 34 GLY n 1 35 LYS n 1 36 ASP n 1 37 TYR n 1 38 TYR n 1 39 PRO n 1 40 ALA n 1 41 ASP n 1 42 LYS n 1 43 GLU n 1 44 ALA n 1 45 GLY n 1 46 ASP n 1 47 ALA n 1 48 MSE n 1 49 SER n 1 50 ARG n 1 51 GLU n 1 52 TRP n 1 53 PRO n 1 54 ALA n 1 55 LEU n 1 56 PRO n 1 57 VAL n 1 58 HIS n 1 59 MSE n 1 60 ARG n 1 61 ALA n 1 62 ASN n 1 63 ARG n 1 64 ASP n 1 65 TRP n 1 66 MSE n 1 67 ASN n 1 68 ARG n 1 69 ALA n 1 70 VAL n 1 71 ALA n 1 72 HIS n 1 73 LEU n 1 74 ALA n 1 75 LYS n 1 76 GLU n 1 77 ALA n 1 78 GLY n 1 79 ILE n 1 80 ARG n 1 81 GLN n 1 82 PHE n 1 83 LEU n 1 84 ASP n 1 85 ILE n 1 86 GLY n 1 87 THR n 1 88 GLY n 1 89 ILE n 1 90 PRO n 1 91 THR n 1 92 SER n 1 93 PRO n 1 94 ASN n 1 95 LEU n 1 96 HIS n 1 97 GLU n 1 98 ILE n 1 99 ALA n 1 100 GLN n 1 101 SER n 1 102 VAL n 1 103 ALA n 1 104 PRO n 1 105 GLU n 1 106 SER n 1 107 ARG n 1 108 VAL n 1 109 VAL n 1 110 TYR n 1 111 VAL n 1 112 ASP n 1 113 ASN n 1 114 ASP n 1 115 PRO n 1 116 ILE n 1 117 VAL n 1 118 LEU n 1 119 THR n 1 120 LEU n 1 121 SER n 1 122 GLN n 1 123 GLY n 1 124 LEU n 1 125 LEU n 1 126 ALA n 1 127 SER n 1 128 THR n 1 129 PRO n 1 130 GLU n 1 131 GLY n 1 132 ARG n 1 133 THR n 1 134 ALA n 1 135 TYR n 1 136 VAL n 1 137 GLU n 1 138 ALA n 1 139 ASP n 1 140 MSE n 1 141 LEU n 1 142 ASP n 1 143 PRO n 1 144 ALA n 1 145 SER n 1 146 ILE n 1 147 LEU n 1 148 ASP n 1 149 ALA n 1 150 PRO n 1 151 GLU n 1 152 LEU n 1 153 ARG n 1 154 ASP n 1 155 THR n 1 156 LEU n 1 157 ASP n 1 158 LEU n 1 159 THR n 1 160 ARG n 1 161 PRO n 1 162 VAL n 1 163 ALA n 1 164 LEU n 1 165 THR n 1 166 VAL n 1 167 ILE n 1 168 ALA n 1 169 ILE n 1 170 VAL n 1 171 HIS n 1 172 PHE n 1 173 VAL n 1 174 LEU n 1 175 ASP n 1 176 GLU n 1 177 ASP n 1 178 ASP n 1 179 ALA n 1 180 VAL n 1 181 GLY n 1 182 ILE n 1 183 VAL n 1 184 ARG n 1 185 ARG n 1 186 LEU n 1 187 LEU n 1 188 GLU n 1 189 PRO n 1 190 LEU n 1 191 PRO n 1 192 SER n 1 193 GLY n 1 194 SER n 1 195 TYR n 1 196 LEU n 1 197 ALA n 1 198 MSE n 1 199 SER n 1 200 ILE n 1 201 GLY n 1 202 THR n 1 203 ALA n 1 204 GLU n 1 205 PHE n 1 206 ALA n 1 207 PRO n 1 208 GLN n 1 209 GLU n 1 210 VAL n 1 211 GLY n 1 212 ARG n 1 213 VAL n 1 214 ALA n 1 215 ARG n 1 216 GLU n 1 217 TYR n 1 218 ALA n 1 219 ALA n 1 220 ARG n 1 221 ASN n 1 222 MSE n 1 223 PRO n 1 224 MSE n 1 225 ARG n 1 226 LEU n 1 227 ARG n 1 228 THR n 1 229 HIS n 1 230 ALA n 1 231 GLU n 1 232 ALA n 1 233 GLU n 1 234 GLU n 1 235 PHE n 1 236 PHE n 1 237 GLU n 1 238 GLY n 1 239 LEU n 1 240 GLU n 1 241 LEU n 1 242 VAL n 1 243 GLU n 1 244 PRO n 1 245 GLY n 1 246 ILE n 1 247 VAL n 1 248 GLN n 1 249 VAL n 1 250 HIS n 1 251 LYS n 1 252 TRP n 1 253 HIS n 1 254 PRO n 1 255 ASP n 1 256 ALA n 1 257 ALA n 1 258 THR n 1 259 ALA n 1 260 ASP n 1 261 GLY n 1 262 ILE n 1 263 ARG n 1 264 ASP n 1 265 GLU n 1 266 ASP n 1 267 ILE n 1 268 ALA n 1 269 MSE n 1 270 TYR n 1 271 GLY n 1 272 ALA n 1 273 VAL n 1 274 ALA n 1 275 ARG n 1 276 LYS n 1 277 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_823353.1, SAV2177, SAV_2177' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MA-4680 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces avermitilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 227882 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q82L35_STRAW _struct_ref.pdbx_db_accession Q82L35 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGGAALPDNGWPADRIDTESAHSARIYDYIIGGKDYYPADKEAGDAMSREWPALPVHMRANRDWMNRAVAHLAKEAGIRQ FLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRP VALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFEGLEL VEPGIVQVHKWHPDAATADGIRDEDIAMYGAVARKP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GO4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 277 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q82L35 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 276 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 276 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3GO4 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q82L35 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3GO4 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;NANODROP, 0.2M Sodium chloride, 2.0M Ammonium sulfate, 0.1M Sodium cacodylate pH 6.5, Additive: 0.001 M S-adenosyl-L-homocysteine, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-02-22 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91837 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91837 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3GO4 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 27.482 _reflns.number_obs 26949 _reflns.pdbx_Rmerge_I_obs 0.099 _reflns.percent_possible_obs 95.300 _reflns.B_iso_Wilson_estimate 15.486 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.86 8213 ? 4709 0.478 1.6 ? ? ? ? ? 92.40 1 1 1.86 1.94 9752 ? 5537 0.388 2.0 ? ? ? ? ? 94.20 2 1 1.94 2.03 9226 ? 5235 0.274 2.7 ? ? ? ? ? 94.90 3 1 2.03 2.13 8555 ? 4876 0.207 3.4 ? ? ? ? ? 95.00 4 1 2.13 2.27 9538 ? 5405 0.167 4.2 ? ? ? ? ? 95.10 5 1 2.27 2.44 9042 ? 5121 0.137 5.0 ? ? ? ? ? 95.90 6 1 2.44 2.69 9345 ? 5323 0.110 6.0 ? ? ? ? ? 96.20 7 1 2.69 3.07 9114 ? 5163 0.082 7.6 ? ? ? ? ? 96.20 8 1 3.07 3.87 9334 ? 5298 0.058 11.1 ? ? ? ? ? 96.50 9 1 3.87 27.482 9347 ? 5309 0.048 13.7 ? ? ? ? ? 96.20 10 1 # _refine.entry_id 3GO4 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 27.482 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.560 _refine.ls_number_reflns_obs 26949 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. S-ADENOSYL HOMOCYSTEINE (SAH) USED IN CO-CRYSTALLIZATION HAS BEEN MODELED IN THE PUTATIVE ACTIVE SITE. 4. SULFATE (SO4) AND 1,2-ETHANEDIOL (EDO) FROM THE CRYSTALLIZATION AND CRYOPROTECTION CONDITION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. 5. RESIDUE D259 IS A RAMACHANDRAN OUTLIER IN A REGION OF POOR ELECTRON DENSITY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.202 _refine.ls_R_factor_R_work 0.200 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.250 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1345 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.220 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 3.120 _refine.aniso_B[2][2] -1.930 _refine.aniso_B[3][3] -0.540 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.590 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.903 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.138 _refine.pdbx_overall_ESU_R_Free 0.139 _refine.overall_SU_ML 0.100 _refine.overall_SU_B 3.277 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_starting_model 'PDB entry 3GIW' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 44.03 _refine.B_iso_min 5.33 _refine.occupancy_max 1.00 _refine.occupancy_min 0.30 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2023 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 2259 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 27.482 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2148 0.015 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1442 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2940 1.630 1.986 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3509 0.953 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 275 3.619 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 100 31.969 23.300 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 338 11.334 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 21 12.681 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 330 0.097 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2419 0.006 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 429 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1337 1.160 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 529 0.310 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2162 1.783 3.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 811 1.260 2.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 771 1.945 3.000 ? ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.500 _refine_ls_shell.number_reflns_R_work 1844 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.290 _refine_ls_shell.R_factor_R_free 0.344 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 99 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1943 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GO4 _struct.title 'Crystal structure of a duf574 family protein (sav_2177) from streptomyces avermitilis ma-4680 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Rossmann-fold protein, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3GO4 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 23 ? GLY A 33 ? HIS A 22 GLY A 32 1 ? 11 HELX_P HELX_P2 2 TYR A 38 ? TRP A 52 ? TYR A 37 TRP A 51 1 ? 15 HELX_P HELX_P3 3 ALA A 54 ? GLU A 76 ? ALA A 53 GLU A 75 1 ? 23 HELX_P HELX_P4 4 ASN A 94 ? ALA A 103 ? ASN A 93 ALA A 102 1 ? 10 HELX_P HELX_P5 5 ASP A 114 ? LEU A 120 ? ASP A 113 LEU A 119 1 ? 7 HELX_P HELX_P6 6 SER A 121 ? ALA A 126 ? SER A 120 ALA A 125 1 ? 6 HELX_P HELX_P7 7 ASP A 142 ? ASP A 148 ? ASP A 141 ASP A 147 1 ? 7 HELX_P HELX_P8 8 ALA A 149 ? ASP A 154 ? ALA A 148 ASP A 153 1 ? 6 HELX_P HELX_P9 9 ILE A 169 ? VAL A 173 ? ILE A 168 VAL A 172 5 ? 5 HELX_P HELX_P10 10 LEU A 174 ? ASP A 177 ? LEU A 173 ASP A 176 5 ? 4 HELX_P HELX_P11 11 ASP A 178 ? GLU A 188 ? ASP A 177 GLU A 187 1 ? 11 HELX_P HELX_P12 12 ALA A 206 ? ARG A 220 ? ALA A 205 ARG A 219 1 ? 15 HELX_P HELX_P13 13 THR A 228 ? GLU A 234 ? THR A 227 GLU A 233 1 ? 7 HELX_P HELX_P14 14 PHE A 235 ? GLU A 237 ? PHE A 234 GLU A 236 5 ? 3 HELX_P HELX_P15 15 HIS A 250 ? TRP A 252 ? HIS A 249 TRP A 251 5 ? 3 HELX_P HELX_P16 16 ARG A 263 ? ILE A 267 ? ARG A 262 ILE A 266 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 47 C ? ? ? 1_555 A MSE 48 N ? ? A ALA 46 A MSE 47 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A MSE 48 C ? ? ? 1_555 A SER 49 N ? ? A MSE 47 A SER 48 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A HIS 58 C ? ? ? 1_555 A MSE 59 N ? ? A HIS 57 A MSE 58 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A MSE 59 C ? ? ? 1_555 A ARG 60 N ? ? A MSE 58 A ARG 59 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale5 covale both ? A TRP 65 C ? ? ? 1_555 A MSE 66 N ? ? A TRP 64 A MSE 65 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? A MSE 66 C ? ? ? 1_555 A ASN 67 N ? ? A MSE 65 A ASN 66 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A ASP 139 C ? ? ? 1_555 A MSE 140 N ? ? A ASP 138 A MSE 139 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale8 covale both ? A MSE 140 C ? ? ? 1_555 A LEU 141 N ? ? A MSE 139 A LEU 140 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale both ? A ALA 197 C ? ? ? 1_555 A MSE 198 N ? ? A ALA 196 A MSE 197 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale10 covale both ? A MSE 198 C ? ? ? 1_555 A SER 199 N ? ? A MSE 197 A SER 198 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? A ASN 221 C ? ? ? 1_555 A MSE 222 N ? ? A ASN 220 A MSE 221 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale12 covale both ? A MSE 222 C ? ? ? 1_555 A PRO 223 N ? ? A MSE 221 A PRO 222 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale13 covale both ? A PRO 223 C ? ? ? 1_555 A MSE 224 N ? ? A PRO 222 A MSE 223 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale14 covale both ? A MSE 224 C ? ? ? 1_555 A ARG 225 N ? ? A MSE 223 A ARG 224 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale15 covale both ? A ALA 268 C ? ? ? 1_555 A MSE 269 N ? ? A ALA 267 A MSE 268 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? A MSE 269 C ? ? ? 1_555 A TYR 270 N ? ? A MSE 268 A TYR 269 1_555 ? ? ? ? ? ? ? 1.336 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 92 A . ? SER 91 A PRO 93 A ? PRO 92 A 1 -1.47 2 GLU 243 A . ? GLU 242 A PRO 244 A ? PRO 243 A 1 4.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 132 ? GLU A 137 ? ARG A 131 GLU A 136 A 2 ARG A 107 ? ASP A 112 ? ARG A 106 ASP A 111 A 3 GLN A 81 ? ILE A 85 ? GLN A 80 ILE A 84 A 4 ALA A 163 ? ILE A 167 ? ALA A 162 ILE A 166 A 5 TYR A 195 ? GLY A 201 ? TYR A 194 GLY A 200 A 6 MSE A 269 ? ARG A 275 ? MSE A 268 ARG A 274 A 7 GLU A 240 ? LEU A 241 ? GLU A 239 LEU A 240 B 1 ARG A 132 ? GLU A 137 ? ARG A 131 GLU A 136 B 2 ARG A 107 ? ASP A 112 ? ARG A 106 ASP A 111 B 3 GLN A 81 ? ILE A 85 ? GLN A 80 ILE A 84 B 4 ALA A 163 ? ILE A 167 ? ALA A 162 ILE A 166 B 5 TYR A 195 ? GLY A 201 ? TYR A 194 GLY A 200 B 6 MSE A 269 ? ARG A 275 ? MSE A 268 ARG A 274 B 7 VAL A 247 ? GLN A 248 ? VAL A 246 GLN A 247 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 134 ? O ALA A 133 N TYR A 110 ? N TYR A 109 A 2 3 O VAL A 109 ? O VAL A 108 N ASP A 84 ? N ASP A 83 A 3 4 N LEU A 83 ? N LEU A 82 O THR A 165 ? O THR A 164 A 4 5 N LEU A 164 ? N LEU A 163 O TYR A 195 ? O TYR A 194 A 5 6 N ILE A 200 ? N ILE A 199 O TYR A 270 ? O TYR A 269 A 6 7 O ARG A 275 ? O ARG A 274 N GLU A 240 ? N GLU A 239 B 1 2 O ALA A 134 ? O ALA A 133 N TYR A 110 ? N TYR A 109 B 2 3 O VAL A 109 ? O VAL A 108 N ASP A 84 ? N ASP A 83 B 3 4 N LEU A 83 ? N LEU A 82 O THR A 165 ? O THR A 164 B 4 5 N LEU A 164 ? N LEU A 163 O TYR A 195 ? O TYR A 194 B 5 6 N ILE A 200 ? N ILE A 199 O TYR A 270 ? O TYR A 269 B 6 7 O GLY A 271 ? O GLY A 270 N VAL A 247 ? N VAL A 246 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAH 277 ? 19 'BINDING SITE FOR RESIDUE SAH A 277' AC2 Software A SO4 278 ? 5 'BINDING SITE FOR RESIDUE SO4 A 278' AC3 Software A EDO 279 ? 3 'BINDING SITE FOR RESIDUE EDO A 279' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 SER A 24 ? SER A 23 . ? 1_555 ? 2 AC1 19 ALA A 25 ? ALA A 24 . ? 1_555 ? 3 AC1 19 TYR A 28 ? TYR A 27 . ? 1_555 ? 4 AC1 19 ASN A 62 ? ASN A 61 . ? 1_555 ? 5 AC1 19 ARG A 63 ? ARG A 62 . ? 1_555 ? 6 AC1 19 GLY A 86 ? GLY A 85 . ? 1_555 ? 7 AC1 19 THR A 87 ? THR A 86 . ? 1_555 ? 8 AC1 19 GLY A 88 ? GLY A 87 . ? 1_555 ? 9 AC1 19 ASP A 112 ? ASP A 111 . ? 1_555 ? 10 AC1 19 ASN A 113 ? ASN A 112 . ? 1_555 ? 11 AC1 19 ASP A 114 ? ASP A 113 . ? 1_555 ? 12 AC1 19 ALA A 138 ? ALA A 137 . ? 1_555 ? 13 AC1 19 ASP A 139 ? ASP A 138 . ? 1_555 ? 14 AC1 19 MSE A 140 ? MSE A 139 . ? 1_555 ? 15 AC1 19 ILE A 167 ? ILE A 166 . ? 1_555 ? 16 AC1 19 ALA A 168 ? ALA A 167 . ? 1_555 ? 17 AC1 19 ILE A 169 ? ILE A 168 . ? 1_555 ? 18 AC1 19 HOH E . ? HOH A 284 . ? 1_555 ? 19 AC1 19 HOH E . ? HOH A 311 . ? 1_555 ? 20 AC2 5 GLY A 34 ? GLY A 33 . ? 1_555 ? 21 AC2 5 LYS A 35 ? LYS A 34 . ? 1_555 ? 22 AC2 5 TYR A 38 ? TYR A 37 . ? 2_556 ? 23 AC2 5 HOH E . ? HOH A 291 . ? 1_555 ? 24 AC2 5 HOH E . ? HOH A 402 . ? 1_555 ? 25 AC3 3 ARG A 153 ? ARG A 152 . ? 1_555 ? 26 AC3 3 LEU A 156 ? LEU A 155 . ? 1_555 ? 27 AC3 3 HOH E . ? HOH A 460 . ? 1_555 ? # _atom_sites.entry_id 3GO4 _atom_sites.fract_transf_matrix[1][1] 0.010567 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007074 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020227 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015466 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 GLY 3 2 ? ? ? A . n A 1 4 GLY 4 3 ? ? ? A . n A 1 5 ALA 5 4 ? ? ? A . n A 1 6 ALA 6 5 ? ? ? A . n A 1 7 LEU 7 6 ? ? ? A . n A 1 8 PRO 8 7 ? ? ? A . n A 1 9 ASP 9 8 ? ? ? A . n A 1 10 ASN 10 9 ? ? ? A . n A 1 11 GLY 11 10 ? ? ? A . n A 1 12 TRP 12 11 ? ? ? A . n A 1 13 PRO 13 12 ? ? ? A . n A 1 14 ALA 14 13 ? ? ? A . n A 1 15 ASP 15 14 ? ? ? A . n A 1 16 ARG 16 15 15 ARG ARG A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 ARG 26 25 25 ARG ARG A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 TYR 28 27 27 TYR TYR A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 TYR 30 29 29 TYR TYR A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 ILE 32 31 31 ILE ILE A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 TYR 37 36 36 TYR TYR A . n A 1 38 TYR 38 37 37 TYR TYR A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 ASP 41 40 40 ASP ASP A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 MSE 48 47 47 MSE MSE A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 ARG 50 49 49 ARG ARG A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 TRP 52 51 51 TRP TRP A . n A 1 53 PRO 53 52 52 PRO PRO A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 VAL 57 56 56 VAL VAL A . n A 1 58 HIS 58 57 57 HIS HIS A . n A 1 59 MSE 59 58 58 MSE MSE A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 TRP 65 64 64 TRP TRP A . n A 1 66 MSE 66 65 65 MSE MSE A . n A 1 67 ASN 67 66 66 ASN ASN A . n A 1 68 ARG 68 67 67 ARG ARG A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 HIS 72 71 71 HIS HIS A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 LYS 75 74 74 LYS LYS A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 PHE 82 81 81 PHE PHE A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ILE 89 88 88 ILE ILE A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 THR 91 90 90 THR THR A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 PRO 93 92 92 PRO PRO A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 ILE 98 97 97 ILE ILE A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 SER 101 100 100 SER SER A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 PRO 104 103 103 PRO PRO A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 VAL 108 107 107 VAL VAL A . n A 1 109 VAL 109 108 108 VAL VAL A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 VAL 111 110 110 VAL VAL A . n A 1 112 ASP 112 111 111 ASP ASP A . n A 1 113 ASN 113 112 112 ASN ASN A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 PRO 115 114 114 PRO PRO A . n A 1 116 ILE 116 115 115 ILE ILE A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 GLN 122 121 121 GLN GLN A . n A 1 123 GLY 123 122 122 GLY GLY A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 SER 127 126 126 SER SER A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 ALA 134 133 133 ALA ALA A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 GLU 137 136 136 GLU GLU A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 MSE 140 139 139 MSE MSE A . n A 1 141 LEU 141 140 140 LEU LEU A . n A 1 142 ASP 142 141 141 ASP ASP A . n A 1 143 PRO 143 142 142 PRO PRO A . n A 1 144 ALA 144 143 143 ALA ALA A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 ILE 146 145 145 ILE ILE A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 GLU 151 150 150 GLU GLU A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 ARG 153 152 152 ARG ARG A . n A 1 154 ASP 154 153 153 ASP ASP A . n A 1 155 THR 155 154 154 THR THR A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 ASP 157 156 156 ASP ASP A . n A 1 158 LEU 158 157 157 LEU LEU A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 ARG 160 159 159 ARG ARG A . n A 1 161 PRO 161 160 160 PRO PRO A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 THR 165 164 164 THR THR A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 ILE 167 166 166 ILE ILE A . n A 1 168 ALA 168 167 167 ALA ALA A . n A 1 169 ILE 169 168 168 ILE ILE A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 HIS 171 170 170 HIS HIS A . n A 1 172 PHE 172 171 171 PHE PHE A . n A 1 173 VAL 173 172 172 VAL VAL A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 ASP 175 174 174 ASP ASP A . n A 1 176 GLU 176 175 175 GLU GLU A . n A 1 177 ASP 177 176 176 ASP ASP A . n A 1 178 ASP 178 177 177 ASP ASP A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 VAL 180 179 179 VAL VAL A . n A 1 181 GLY 181 180 180 GLY GLY A . n A 1 182 ILE 182 181 181 ILE ILE A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 ARG 184 183 183 ARG ARG A . n A 1 185 ARG 185 184 184 ARG ARG A . n A 1 186 LEU 186 185 185 LEU LEU A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 PRO 189 188 188 PRO PRO A . n A 1 190 LEU 190 189 189 LEU LEU A . n A 1 191 PRO 191 190 190 PRO PRO A . n A 1 192 SER 192 191 191 SER SER A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 SER 194 193 193 SER SER A . n A 1 195 TYR 195 194 194 TYR TYR A . n A 1 196 LEU 196 195 195 LEU LEU A . n A 1 197 ALA 197 196 196 ALA ALA A . n A 1 198 MSE 198 197 197 MSE MSE A . n A 1 199 SER 199 198 198 SER SER A . n A 1 200 ILE 200 199 199 ILE ILE A . n A 1 201 GLY 201 200 200 GLY GLY A . n A 1 202 THR 202 201 201 THR THR A . n A 1 203 ALA 203 202 202 ALA ALA A . n A 1 204 GLU 204 203 203 GLU GLU A . n A 1 205 PHE 205 204 204 PHE PHE A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 PRO 207 206 206 PRO PRO A . n A 1 208 GLN 208 207 207 GLN GLN A . n A 1 209 GLU 209 208 208 GLU GLU A . n A 1 210 VAL 210 209 209 VAL VAL A . n A 1 211 GLY 211 210 210 GLY GLY A . n A 1 212 ARG 212 211 211 ARG ARG A . n A 1 213 VAL 213 212 212 VAL VAL A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 ARG 215 214 214 ARG ARG A . n A 1 216 GLU 216 215 215 GLU GLU A . n A 1 217 TYR 217 216 216 TYR TYR A . n A 1 218 ALA 218 217 217 ALA ALA A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 ARG 220 219 219 ARG ARG A . n A 1 221 ASN 221 220 220 ASN ASN A . n A 1 222 MSE 222 221 221 MSE MSE A . n A 1 223 PRO 223 222 222 PRO PRO A . n A 1 224 MSE 224 223 223 MSE MSE A . n A 1 225 ARG 225 224 224 ARG ARG A . n A 1 226 LEU 226 225 225 LEU LEU A . n A 1 227 ARG 227 226 226 ARG ARG A . n A 1 228 THR 228 227 227 THR THR A . n A 1 229 HIS 229 228 228 HIS HIS A . n A 1 230 ALA 230 229 229 ALA ALA A . n A 1 231 GLU 231 230 230 GLU GLU A . n A 1 232 ALA 232 231 231 ALA ALA A . n A 1 233 GLU 233 232 232 GLU GLU A . n A 1 234 GLU 234 233 233 GLU GLU A . n A 1 235 PHE 235 234 234 PHE PHE A . n A 1 236 PHE 236 235 235 PHE PHE A . n A 1 237 GLU 237 236 236 GLU GLU A . n A 1 238 GLY 238 237 237 GLY GLY A . n A 1 239 LEU 239 238 238 LEU LEU A . n A 1 240 GLU 240 239 239 GLU GLU A . n A 1 241 LEU 241 240 240 LEU LEU A . n A 1 242 VAL 242 241 241 VAL VAL A . n A 1 243 GLU 243 242 242 GLU GLU A . n A 1 244 PRO 244 243 243 PRO PRO A . n A 1 245 GLY 245 244 244 GLY GLY A . n A 1 246 ILE 246 245 245 ILE ILE A . n A 1 247 VAL 247 246 246 VAL VAL A . n A 1 248 GLN 248 247 247 GLN GLN A . n A 1 249 VAL 249 248 248 VAL VAL A . n A 1 250 HIS 250 249 249 HIS HIS A . n A 1 251 LYS 251 250 250 LYS LYS A . n A 1 252 TRP 252 251 251 TRP TRP A . n A 1 253 HIS 253 252 252 HIS HIS A . n A 1 254 PRO 254 253 253 PRO PRO A . n A 1 255 ASP 255 254 254 ASP ASP A . n A 1 256 ALA 256 255 255 ALA ALA A . n A 1 257 ALA 257 256 256 ALA ALA A . n A 1 258 THR 258 257 257 THR THR A . n A 1 259 ALA 259 258 258 ALA ALA A . n A 1 260 ASP 260 259 259 ASP ASP A . n A 1 261 GLY 261 260 260 GLY GLY A . n A 1 262 ILE 262 261 261 ILE ILE A . n A 1 263 ARG 263 262 262 ARG ARG A . n A 1 264 ASP 264 263 263 ASP ASP A . n A 1 265 GLU 265 264 264 GLU GLU A . n A 1 266 ASP 266 265 265 ASP ASP A . n A 1 267 ILE 267 266 266 ILE ILE A . n A 1 268 ALA 268 267 267 ALA ALA A . n A 1 269 MSE 269 268 268 MSE MSE A . n A 1 270 TYR 270 269 269 TYR TYR A . n A 1 271 GLY 271 270 270 GLY GLY A . n A 1 272 ALA 272 271 271 ALA ALA A . n A 1 273 VAL 273 272 272 VAL VAL A . n A 1 274 ALA 274 273 273 ALA ALA A . n A 1 275 ARG 275 274 274 ARG ARG A . n A 1 276 LYS 276 275 275 LYS LYS A . n A 1 277 PRO 277 276 276 PRO PRO A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 277 1 SAH SAH A . C 3 SO4 1 278 2 SO4 SO4 A . D 4 EDO 1 279 3 EDO EDO A . E 5 HOH 1 280 4 HOH HOH A . E 5 HOH 2 281 5 HOH HOH A . E 5 HOH 3 282 6 HOH HOH A . E 5 HOH 4 283 7 HOH HOH A . E 5 HOH 5 284 8 HOH HOH A . E 5 HOH 6 285 9 HOH HOH A . E 5 HOH 7 286 10 HOH HOH A . E 5 HOH 8 287 11 HOH HOH A . E 5 HOH 9 288 12 HOH HOH A . E 5 HOH 10 289 13 HOH HOH A . E 5 HOH 11 290 14 HOH HOH A . E 5 HOH 12 291 15 HOH HOH A . E 5 HOH 13 292 16 HOH HOH A . E 5 HOH 14 293 17 HOH HOH A . E 5 HOH 15 294 18 HOH HOH A . E 5 HOH 16 295 19 HOH HOH A . E 5 HOH 17 296 20 HOH HOH A . E 5 HOH 18 297 21 HOH HOH A . E 5 HOH 19 298 22 HOH HOH A . E 5 HOH 20 299 23 HOH HOH A . E 5 HOH 21 300 24 HOH HOH A . E 5 HOH 22 301 25 HOH HOH A . E 5 HOH 23 302 26 HOH HOH A . E 5 HOH 24 303 27 HOH HOH A . E 5 HOH 25 304 28 HOH HOH A . E 5 HOH 26 305 29 HOH HOH A . E 5 HOH 27 306 30 HOH HOH A . E 5 HOH 28 307 31 HOH HOH A . E 5 HOH 29 308 32 HOH HOH A . E 5 HOH 30 309 33 HOH HOH A . E 5 HOH 31 310 34 HOH HOH A . E 5 HOH 32 311 35 HOH HOH A . E 5 HOH 33 312 36 HOH HOH A . E 5 HOH 34 313 37 HOH HOH A . E 5 HOH 35 314 38 HOH HOH A . E 5 HOH 36 315 39 HOH HOH A . E 5 HOH 37 316 40 HOH HOH A . E 5 HOH 38 317 41 HOH HOH A . E 5 HOH 39 318 42 HOH HOH A . E 5 HOH 40 319 43 HOH HOH A . E 5 HOH 41 320 44 HOH HOH A . E 5 HOH 42 321 45 HOH HOH A . E 5 HOH 43 322 46 HOH HOH A . E 5 HOH 44 323 47 HOH HOH A . E 5 HOH 45 324 48 HOH HOH A . E 5 HOH 46 325 49 HOH HOH A . E 5 HOH 47 326 50 HOH HOH A . E 5 HOH 48 327 51 HOH HOH A . E 5 HOH 49 328 52 HOH HOH A . E 5 HOH 50 329 53 HOH HOH A . E 5 HOH 51 330 54 HOH HOH A . E 5 HOH 52 331 55 HOH HOH A . E 5 HOH 53 332 56 HOH HOH A . E 5 HOH 54 333 57 HOH HOH A . E 5 HOH 55 334 58 HOH HOH A . E 5 HOH 56 335 59 HOH HOH A . E 5 HOH 57 336 60 HOH HOH A . E 5 HOH 58 337 61 HOH HOH A . E 5 HOH 59 338 62 HOH HOH A . E 5 HOH 60 339 63 HOH HOH A . E 5 HOH 61 340 64 HOH HOH A . E 5 HOH 62 341 65 HOH HOH A . E 5 HOH 63 342 66 HOH HOH A . E 5 HOH 64 343 67 HOH HOH A . E 5 HOH 65 344 68 HOH HOH A . E 5 HOH 66 345 69 HOH HOH A . E 5 HOH 67 346 70 HOH HOH A . E 5 HOH 68 347 71 HOH HOH A . E 5 HOH 69 348 72 HOH HOH A . E 5 HOH 70 349 73 HOH HOH A . E 5 HOH 71 350 74 HOH HOH A . E 5 HOH 72 351 75 HOH HOH A . E 5 HOH 73 352 76 HOH HOH A . E 5 HOH 74 353 77 HOH HOH A . E 5 HOH 75 354 78 HOH HOH A . E 5 HOH 76 355 79 HOH HOH A . E 5 HOH 77 356 80 HOH HOH A . E 5 HOH 78 357 81 HOH HOH A . E 5 HOH 79 358 82 HOH HOH A . E 5 HOH 80 359 83 HOH HOH A . E 5 HOH 81 360 84 HOH HOH A . E 5 HOH 82 361 85 HOH HOH A . E 5 HOH 83 362 86 HOH HOH A . E 5 HOH 84 363 87 HOH HOH A . E 5 HOH 85 364 88 HOH HOH A . E 5 HOH 86 365 89 HOH HOH A . E 5 HOH 87 366 90 HOH HOH A . E 5 HOH 88 367 91 HOH HOH A . E 5 HOH 89 368 92 HOH HOH A . E 5 HOH 90 369 93 HOH HOH A . E 5 HOH 91 370 94 HOH HOH A . E 5 HOH 92 371 95 HOH HOH A . E 5 HOH 93 372 96 HOH HOH A . E 5 HOH 94 373 97 HOH HOH A . E 5 HOH 95 374 98 HOH HOH A . E 5 HOH 96 375 99 HOH HOH A . E 5 HOH 97 376 100 HOH HOH A . E 5 HOH 98 377 101 HOH HOH A . E 5 HOH 99 378 102 HOH HOH A . E 5 HOH 100 379 103 HOH HOH A . E 5 HOH 101 380 104 HOH HOH A . E 5 HOH 102 381 105 HOH HOH A . E 5 HOH 103 382 106 HOH HOH A . E 5 HOH 104 383 107 HOH HOH A . E 5 HOH 105 384 108 HOH HOH A . E 5 HOH 106 385 109 HOH HOH A . E 5 HOH 107 386 110 HOH HOH A . E 5 HOH 108 387 111 HOH HOH A . E 5 HOH 109 388 112 HOH HOH A . E 5 HOH 110 389 113 HOH HOH A . E 5 HOH 111 390 114 HOH HOH A . E 5 HOH 112 391 115 HOH HOH A . E 5 HOH 113 392 116 HOH HOH A . E 5 HOH 114 393 117 HOH HOH A . E 5 HOH 115 394 118 HOH HOH A . E 5 HOH 116 395 119 HOH HOH A . E 5 HOH 117 396 120 HOH HOH A . E 5 HOH 118 397 121 HOH HOH A . E 5 HOH 119 398 122 HOH HOH A . E 5 HOH 120 399 123 HOH HOH A . E 5 HOH 121 400 124 HOH HOH A . E 5 HOH 122 401 125 HOH HOH A . E 5 HOH 123 402 126 HOH HOH A . E 5 HOH 124 403 127 HOH HOH A . E 5 HOH 125 404 128 HOH HOH A . E 5 HOH 126 405 129 HOH HOH A . E 5 HOH 127 406 130 HOH HOH A . E 5 HOH 128 407 131 HOH HOH A . E 5 HOH 129 408 132 HOH HOH A . E 5 HOH 130 409 133 HOH HOH A . E 5 HOH 131 410 134 HOH HOH A . E 5 HOH 132 411 135 HOH HOH A . E 5 HOH 133 412 136 HOH HOH A . E 5 HOH 134 413 137 HOH HOH A . E 5 HOH 135 414 138 HOH HOH A . E 5 HOH 136 415 139 HOH HOH A . E 5 HOH 137 416 140 HOH HOH A . E 5 HOH 138 417 141 HOH HOH A . E 5 HOH 139 418 142 HOH HOH A . E 5 HOH 140 419 143 HOH HOH A . E 5 HOH 141 420 144 HOH HOH A . E 5 HOH 142 421 145 HOH HOH A . E 5 HOH 143 422 146 HOH HOH A . E 5 HOH 144 423 147 HOH HOH A . E 5 HOH 145 424 148 HOH HOH A . E 5 HOH 146 425 149 HOH HOH A . E 5 HOH 147 426 150 HOH HOH A . E 5 HOH 148 427 151 HOH HOH A . E 5 HOH 149 428 152 HOH HOH A . E 5 HOH 150 429 153 HOH HOH A . E 5 HOH 151 430 154 HOH HOH A . E 5 HOH 152 431 155 HOH HOH A . E 5 HOH 153 432 156 HOH HOH A . E 5 HOH 154 433 157 HOH HOH A . E 5 HOH 155 434 158 HOH HOH A . E 5 HOH 156 435 159 HOH HOH A . E 5 HOH 157 436 160 HOH HOH A . E 5 HOH 158 437 161 HOH HOH A . E 5 HOH 159 438 162 HOH HOH A . E 5 HOH 160 439 163 HOH HOH A . E 5 HOH 161 440 164 HOH HOH A . E 5 HOH 162 441 165 HOH HOH A . E 5 HOH 163 442 166 HOH HOH A . E 5 HOH 164 443 167 HOH HOH A . E 5 HOH 165 444 168 HOH HOH A . E 5 HOH 166 445 169 HOH HOH A . E 5 HOH 167 446 170 HOH HOH A . E 5 HOH 168 447 171 HOH HOH A . E 5 HOH 169 448 172 HOH HOH A . E 5 HOH 170 449 173 HOH HOH A . E 5 HOH 171 450 174 HOH HOH A . E 5 HOH 172 451 175 HOH HOH A . E 5 HOH 173 452 176 HOH HOH A . E 5 HOH 174 453 177 HOH HOH A . E 5 HOH 175 454 178 HOH HOH A . E 5 HOH 176 455 179 HOH HOH A . E 5 HOH 177 456 180 HOH HOH A . E 5 HOH 178 457 181 HOH HOH A . E 5 HOH 179 458 182 HOH HOH A . E 5 HOH 180 459 183 HOH HOH A . E 5 HOH 181 460 184 HOH HOH A . E 5 HOH 182 461 185 HOH HOH A . E 5 HOH 183 462 186 HOH HOH A . E 5 HOH 184 463 187 HOH HOH A . E 5 HOH 185 464 188 HOH HOH A . E 5 HOH 186 465 189 HOH HOH A . E 5 HOH 187 466 190 HOH HOH A . E 5 HOH 188 467 191 HOH HOH A . E 5 HOH 189 468 192 HOH HOH A . E 5 HOH 190 469 193 HOH HOH A . E 5 HOH 191 470 194 HOH HOH A . E 5 HOH 192 471 195 HOH HOH A . E 5 HOH 193 472 196 HOH HOH A . E 5 HOH 194 473 197 HOH HOH A . E 5 HOH 195 474 198 HOH HOH A . E 5 HOH 196 475 199 HOH HOH A . E 5 HOH 197 476 200 HOH HOH A . E 5 HOH 198 477 201 HOH HOH A . E 5 HOH 199 478 202 HOH HOH A . E 5 HOH 200 479 203 HOH HOH A . E 5 HOH 201 480 204 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 48 A MSE 47 ? MET SELENOMETHIONINE 2 A MSE 59 A MSE 58 ? MET SELENOMETHIONINE 3 A MSE 66 A MSE 65 ? MET SELENOMETHIONINE 4 A MSE 140 A MSE 139 ? MET SELENOMETHIONINE 5 A MSE 198 A MSE 197 ? MET SELENOMETHIONINE 6 A MSE 222 A MSE 221 ? MET SELENOMETHIONINE 7 A MSE 224 A MSE 223 ? MET SELENOMETHIONINE 8 A MSE 269 A MSE 268 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 290 ? E HOH . 2 1 A HOH 318 ? E HOH . 3 1 A HOH 450 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-04-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 6 'Structure model' 1 5 2023-09-20 7 'Structure model' 1 6 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Refinement description' 11 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' pdbx_struct_special_symmetry 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' pdbx_initial_refinement_model 11 7 'Structure model' chem_comp_atom 12 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 18 7 'Structure model' '_chem_comp_atom.atom_id' 19 7 'Structure model' '_chem_comp_bond.atom_id_2' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 MOLREP . ? ? ? ? phasing ? ? ? 8 # _pdbx_entry_details.entry_id 3GO4 _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 215 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NH1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 219 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 17 ? ? 53.64 70.57 2 1 LEU A 140 ? ? -69.32 0.15 3 1 ASP A 177 ? ? 58.32 70.10 4 1 ALA A 205 ? ? -155.09 64.26 5 1 ASP A 259 ? ? -55.97 90.66 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 74 ? CD ? A LYS 75 CD 2 1 Y 1 A LYS 74 ? CE ? A LYS 75 CE 3 1 Y 1 A LYS 74 ? NZ ? A LYS 75 NZ 4 1 Y 1 A ASP 259 ? CB ? A ASP 260 CB 5 1 Y 1 A ASP 259 ? CG ? A ASP 260 CG 6 1 Y 1 A ASP 259 ? OD1 ? A ASP 260 OD1 7 1 Y 1 A ASP 259 ? OD2 ? A ASP 260 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A GLY 2 ? A GLY 3 4 1 Y 1 A GLY 3 ? A GLY 4 5 1 Y 1 A ALA 4 ? A ALA 5 6 1 Y 1 A ALA 5 ? A ALA 6 7 1 Y 1 A LEU 6 ? A LEU 7 8 1 Y 1 A PRO 7 ? A PRO 8 9 1 Y 1 A ASP 8 ? A ASP 9 10 1 Y 1 A ASN 9 ? A ASN 10 11 1 Y 1 A GLY 10 ? A GLY 11 12 1 Y 1 A TRP 11 ? A TRP 12 13 1 Y 1 A PRO 12 ? A PRO 13 14 1 Y 1 A ALA 13 ? A ALA 14 15 1 Y 1 A ASP 14 ? A ASP 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 EDO C1 C N N 74 EDO O1 O N N 75 EDO C2 C N N 76 EDO O2 O N N 77 EDO H11 H N N 78 EDO H12 H N N 79 EDO HO1 H N N 80 EDO H21 H N N 81 EDO H22 H N N 82 EDO HO2 H N N 83 GLN N N N N 84 GLN CA C N S 85 GLN C C N N 86 GLN O O N N 87 GLN CB C N N 88 GLN CG C N N 89 GLN CD C N N 90 GLN OE1 O N N 91 GLN NE2 N N N 92 GLN OXT O N N 93 GLN H H N N 94 GLN H2 H N N 95 GLN HA H N N 96 GLN HB2 H N N 97 GLN HB3 H N N 98 GLN HG2 H N N 99 GLN HG3 H N N 100 GLN HE21 H N N 101 GLN HE22 H N N 102 GLN HXT H N N 103 GLU N N N N 104 GLU CA C N S 105 GLU C C N N 106 GLU O O N N 107 GLU CB C N N 108 GLU CG C N N 109 GLU CD C N N 110 GLU OE1 O N N 111 GLU OE2 O N N 112 GLU OXT O N N 113 GLU H H N N 114 GLU H2 H N N 115 GLU HA H N N 116 GLU HB2 H N N 117 GLU HB3 H N N 118 GLU HG2 H N N 119 GLU HG3 H N N 120 GLU HE2 H N N 121 GLU HXT H N N 122 GLY N N N N 123 GLY CA C N N 124 GLY C C N N 125 GLY O O N N 126 GLY OXT O N N 127 GLY H H N N 128 GLY H2 H N N 129 GLY HA2 H N N 130 GLY HA3 H N N 131 GLY HXT H N N 132 HIS N N N N 133 HIS CA C N S 134 HIS C C N N 135 HIS O O N N 136 HIS CB C N N 137 HIS CG C Y N 138 HIS ND1 N Y N 139 HIS CD2 C Y N 140 HIS CE1 C Y N 141 HIS NE2 N Y N 142 HIS OXT O N N 143 HIS H H N N 144 HIS H2 H N N 145 HIS HA H N N 146 HIS HB2 H N N 147 HIS HB3 H N N 148 HIS HD1 H N N 149 HIS HD2 H N N 150 HIS HE1 H N N 151 HIS HE2 H N N 152 HIS HXT H N N 153 HOH O O N N 154 HOH H1 H N N 155 HOH H2 H N N 156 ILE N N N N 157 ILE CA C N S 158 ILE C C N N 159 ILE O O N N 160 ILE CB C N S 161 ILE CG1 C N N 162 ILE CG2 C N N 163 ILE CD1 C N N 164 ILE OXT O N N 165 ILE H H N N 166 ILE H2 H N N 167 ILE HA H N N 168 ILE HB H N N 169 ILE HG12 H N N 170 ILE HG13 H N N 171 ILE HG21 H N N 172 ILE HG22 H N N 173 ILE HG23 H N N 174 ILE HD11 H N N 175 ILE HD12 H N N 176 ILE HD13 H N N 177 ILE HXT H N N 178 LEU N N N N 179 LEU CA C N S 180 LEU C C N N 181 LEU O O N N 182 LEU CB C N N 183 LEU CG C N N 184 LEU CD1 C N N 185 LEU CD2 C N N 186 LEU OXT O N N 187 LEU H H N N 188 LEU H2 H N N 189 LEU HA H N N 190 LEU HB2 H N N 191 LEU HB3 H N N 192 LEU HG H N N 193 LEU HD11 H N N 194 LEU HD12 H N N 195 LEU HD13 H N N 196 LEU HD21 H N N 197 LEU HD22 H N N 198 LEU HD23 H N N 199 LEU HXT H N N 200 LYS N N N N 201 LYS CA C N S 202 LYS C C N N 203 LYS O O N N 204 LYS CB C N N 205 LYS CG C N N 206 LYS CD C N N 207 LYS CE C N N 208 LYS NZ N N N 209 LYS OXT O N N 210 LYS H H N N 211 LYS H2 H N N 212 LYS HA H N N 213 LYS HB2 H N N 214 LYS HB3 H N N 215 LYS HG2 H N N 216 LYS HG3 H N N 217 LYS HD2 H N N 218 LYS HD3 H N N 219 LYS HE2 H N N 220 LYS HE3 H N N 221 LYS HZ1 H N N 222 LYS HZ2 H N N 223 LYS HZ3 H N N 224 LYS HXT H N N 225 MSE N N N N 226 MSE CA C N S 227 MSE C C N N 228 MSE O O N N 229 MSE OXT O N N 230 MSE CB C N N 231 MSE CG C N N 232 MSE SE SE N N 233 MSE CE C N N 234 MSE H H N N 235 MSE H2 H N N 236 MSE HA H N N 237 MSE HXT H N N 238 MSE HB2 H N N 239 MSE HB3 H N N 240 MSE HG2 H N N 241 MSE HG3 H N N 242 MSE HE1 H N N 243 MSE HE2 H N N 244 MSE HE3 H N N 245 PHE N N N N 246 PHE CA C N S 247 PHE C C N N 248 PHE O O N N 249 PHE CB C N N 250 PHE CG C Y N 251 PHE CD1 C Y N 252 PHE CD2 C Y N 253 PHE CE1 C Y N 254 PHE CE2 C Y N 255 PHE CZ C Y N 256 PHE OXT O N N 257 PHE H H N N 258 PHE H2 H N N 259 PHE HA H N N 260 PHE HB2 H N N 261 PHE HB3 H N N 262 PHE HD1 H N N 263 PHE HD2 H N N 264 PHE HE1 H N N 265 PHE HE2 H N N 266 PHE HZ H N N 267 PHE HXT H N N 268 PRO N N N N 269 PRO CA C N S 270 PRO C C N N 271 PRO O O N N 272 PRO CB C N N 273 PRO CG C N N 274 PRO CD C N N 275 PRO OXT O N N 276 PRO H H N N 277 PRO HA H N N 278 PRO HB2 H N N 279 PRO HB3 H N N 280 PRO HG2 H N N 281 PRO HG3 H N N 282 PRO HD2 H N N 283 PRO HD3 H N N 284 PRO HXT H N N 285 SAH N N N N 286 SAH CA C N S 287 SAH CB C N N 288 SAH CG C N N 289 SAH SD S N N 290 SAH C C N N 291 SAH O O N N 292 SAH OXT O N N 293 SAH "C5'" C N N 294 SAH "C4'" C N S 295 SAH "O4'" O N N 296 SAH "C3'" C N S 297 SAH "O3'" O N N 298 SAH "C2'" C N R 299 SAH "O2'" O N N 300 SAH "C1'" C N R 301 SAH N9 N Y N 302 SAH C8 C Y N 303 SAH N7 N Y N 304 SAH C5 C Y N 305 SAH C6 C Y N 306 SAH N6 N N N 307 SAH N1 N Y N 308 SAH C2 C Y N 309 SAH N3 N Y N 310 SAH C4 C Y N 311 SAH HN1 H N N 312 SAH HN2 H N N 313 SAH HA H N N 314 SAH HB1 H N N 315 SAH HB2 H N N 316 SAH HG1 H N N 317 SAH HG2 H N N 318 SAH HXT H N N 319 SAH "H5'1" H N N 320 SAH "H5'2" H N N 321 SAH "H4'" H N N 322 SAH "H3'" H N N 323 SAH "HO3'" H N N 324 SAH "H2'" H N N 325 SAH "HO2'" H N N 326 SAH "H1'" H N N 327 SAH H8 H N N 328 SAH HN61 H N N 329 SAH HN62 H N N 330 SAH H2 H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 SO4 S S N N 346 SO4 O1 O N N 347 SO4 O2 O N N 348 SO4 O3 O N N 349 SO4 O4 O N N 350 THR N N N N 351 THR CA C N S 352 THR C C N N 353 THR O O N N 354 THR CB C N R 355 THR OG1 O N N 356 THR CG2 C N N 357 THR OXT O N N 358 THR H H N N 359 THR H2 H N N 360 THR HA H N N 361 THR HB H N N 362 THR HG1 H N N 363 THR HG21 H N N 364 THR HG22 H N N 365 THR HG23 H N N 366 THR HXT H N N 367 TRP N N N N 368 TRP CA C N S 369 TRP C C N N 370 TRP O O N N 371 TRP CB C N N 372 TRP CG C Y N 373 TRP CD1 C Y N 374 TRP CD2 C Y N 375 TRP NE1 N Y N 376 TRP CE2 C Y N 377 TRP CE3 C Y N 378 TRP CZ2 C Y N 379 TRP CZ3 C Y N 380 TRP CH2 C Y N 381 TRP OXT O N N 382 TRP H H N N 383 TRP H2 H N N 384 TRP HA H N N 385 TRP HB2 H N N 386 TRP HB3 H N N 387 TRP HD1 H N N 388 TRP HE1 H N N 389 TRP HE3 H N N 390 TRP HZ2 H N N 391 TRP HZ3 H N N 392 TRP HH2 H N N 393 TRP HXT H N N 394 TYR N N N N 395 TYR CA C N S 396 TYR C C N N 397 TYR O O N N 398 TYR CB C N N 399 TYR CG C Y N 400 TYR CD1 C Y N 401 TYR CD2 C Y N 402 TYR CE1 C Y N 403 TYR CE2 C Y N 404 TYR CZ C Y N 405 TYR OH O N N 406 TYR OXT O N N 407 TYR H H N N 408 TYR H2 H N N 409 TYR HA H N N 410 TYR HB2 H N N 411 TYR HB3 H N N 412 TYR HD1 H N N 413 TYR HD2 H N N 414 TYR HE1 H N N 415 TYR HE2 H N N 416 TYR HH H N N 417 TYR HXT H N N 418 VAL N N N N 419 VAL CA C N S 420 VAL C C N N 421 VAL O O N N 422 VAL CB C N N 423 VAL CG1 C N N 424 VAL CG2 C N N 425 VAL OXT O N N 426 VAL H H N N 427 VAL H2 H N N 428 VAL HA H N N 429 VAL HB H N N 430 VAL HG11 H N N 431 VAL HG12 H N N 432 VAL HG13 H N N 433 VAL HG21 H N N 434 VAL HG22 H N N 435 VAL HG23 H N N 436 VAL HXT H N N 437 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 EDO C1 O1 sing N N 70 EDO C1 C2 sing N N 71 EDO C1 H11 sing N N 72 EDO C1 H12 sing N N 73 EDO O1 HO1 sing N N 74 EDO C2 O2 sing N N 75 EDO C2 H21 sing N N 76 EDO C2 H22 sing N N 77 EDO O2 HO2 sing N N 78 GLN N CA sing N N 79 GLN N H sing N N 80 GLN N H2 sing N N 81 GLN CA C sing N N 82 GLN CA CB sing N N 83 GLN CA HA sing N N 84 GLN C O doub N N 85 GLN C OXT sing N N 86 GLN CB CG sing N N 87 GLN CB HB2 sing N N 88 GLN CB HB3 sing N N 89 GLN CG CD sing N N 90 GLN CG HG2 sing N N 91 GLN CG HG3 sing N N 92 GLN CD OE1 doub N N 93 GLN CD NE2 sing N N 94 GLN NE2 HE21 sing N N 95 GLN NE2 HE22 sing N N 96 GLN OXT HXT sing N N 97 GLU N CA sing N N 98 GLU N H sing N N 99 GLU N H2 sing N N 100 GLU CA C sing N N 101 GLU CA CB sing N N 102 GLU CA HA sing N N 103 GLU C O doub N N 104 GLU C OXT sing N N 105 GLU CB CG sing N N 106 GLU CB HB2 sing N N 107 GLU CB HB3 sing N N 108 GLU CG CD sing N N 109 GLU CG HG2 sing N N 110 GLU CG HG3 sing N N 111 GLU CD OE1 doub N N 112 GLU CD OE2 sing N N 113 GLU OE2 HE2 sing N N 114 GLU OXT HXT sing N N 115 GLY N CA sing N N 116 GLY N H sing N N 117 GLY N H2 sing N N 118 GLY CA C sing N N 119 GLY CA HA2 sing N N 120 GLY CA HA3 sing N N 121 GLY C O doub N N 122 GLY C OXT sing N N 123 GLY OXT HXT sing N N 124 HIS N CA sing N N 125 HIS N H sing N N 126 HIS N H2 sing N N 127 HIS CA C sing N N 128 HIS CA CB sing N N 129 HIS CA HA sing N N 130 HIS C O doub N N 131 HIS C OXT sing N N 132 HIS CB CG sing N N 133 HIS CB HB2 sing N N 134 HIS CB HB3 sing N N 135 HIS CG ND1 sing Y N 136 HIS CG CD2 doub Y N 137 HIS ND1 CE1 doub Y N 138 HIS ND1 HD1 sing N N 139 HIS CD2 NE2 sing Y N 140 HIS CD2 HD2 sing N N 141 HIS CE1 NE2 sing Y N 142 HIS CE1 HE1 sing N N 143 HIS NE2 HE2 sing N N 144 HIS OXT HXT sing N N 145 HOH O H1 sing N N 146 HOH O H2 sing N N 147 ILE N CA sing N N 148 ILE N H sing N N 149 ILE N H2 sing N N 150 ILE CA C sing N N 151 ILE CA CB sing N N 152 ILE CA HA sing N N 153 ILE C O doub N N 154 ILE C OXT sing N N 155 ILE CB CG1 sing N N 156 ILE CB CG2 sing N N 157 ILE CB HB sing N N 158 ILE CG1 CD1 sing N N 159 ILE CG1 HG12 sing N N 160 ILE CG1 HG13 sing N N 161 ILE CG2 HG21 sing N N 162 ILE CG2 HG22 sing N N 163 ILE CG2 HG23 sing N N 164 ILE CD1 HD11 sing N N 165 ILE CD1 HD12 sing N N 166 ILE CD1 HD13 sing N N 167 ILE OXT HXT sing N N 168 LEU N CA sing N N 169 LEU N H sing N N 170 LEU N H2 sing N N 171 LEU CA C sing N N 172 LEU CA CB sing N N 173 LEU CA HA sing N N 174 LEU C O doub N N 175 LEU C OXT sing N N 176 LEU CB CG sing N N 177 LEU CB HB2 sing N N 178 LEU CB HB3 sing N N 179 LEU CG CD1 sing N N 180 LEU CG CD2 sing N N 181 LEU CG HG sing N N 182 LEU CD1 HD11 sing N N 183 LEU CD1 HD12 sing N N 184 LEU CD1 HD13 sing N N 185 LEU CD2 HD21 sing N N 186 LEU CD2 HD22 sing N N 187 LEU CD2 HD23 sing N N 188 LEU OXT HXT sing N N 189 LYS N CA sing N N 190 LYS N H sing N N 191 LYS N H2 sing N N 192 LYS CA C sing N N 193 LYS CA CB sing N N 194 LYS CA HA sing N N 195 LYS C O doub N N 196 LYS C OXT sing N N 197 LYS CB CG sing N N 198 LYS CB HB2 sing N N 199 LYS CB HB3 sing N N 200 LYS CG CD sing N N 201 LYS CG HG2 sing N N 202 LYS CG HG3 sing N N 203 LYS CD CE sing N N 204 LYS CD HD2 sing N N 205 LYS CD HD3 sing N N 206 LYS CE NZ sing N N 207 LYS CE HE2 sing N N 208 LYS CE HE3 sing N N 209 LYS NZ HZ1 sing N N 210 LYS NZ HZ2 sing N N 211 LYS NZ HZ3 sing N N 212 LYS OXT HXT sing N N 213 MSE N CA sing N N 214 MSE N H sing N N 215 MSE N H2 sing N N 216 MSE CA C sing N N 217 MSE CA CB sing N N 218 MSE CA HA sing N N 219 MSE C O doub N N 220 MSE C OXT sing N N 221 MSE OXT HXT sing N N 222 MSE CB CG sing N N 223 MSE CB HB2 sing N N 224 MSE CB HB3 sing N N 225 MSE CG SE sing N N 226 MSE CG HG2 sing N N 227 MSE CG HG3 sing N N 228 MSE SE CE sing N N 229 MSE CE HE1 sing N N 230 MSE CE HE2 sing N N 231 MSE CE HE3 sing N N 232 PHE N CA sing N N 233 PHE N H sing N N 234 PHE N H2 sing N N 235 PHE CA C sing N N 236 PHE CA CB sing N N 237 PHE CA HA sing N N 238 PHE C O doub N N 239 PHE C OXT sing N N 240 PHE CB CG sing N N 241 PHE CB HB2 sing N N 242 PHE CB HB3 sing N N 243 PHE CG CD1 doub Y N 244 PHE CG CD2 sing Y N 245 PHE CD1 CE1 sing Y N 246 PHE CD1 HD1 sing N N 247 PHE CD2 CE2 doub Y N 248 PHE CD2 HD2 sing N N 249 PHE CE1 CZ doub Y N 250 PHE CE1 HE1 sing N N 251 PHE CE2 CZ sing Y N 252 PHE CE2 HE2 sing N N 253 PHE CZ HZ sing N N 254 PHE OXT HXT sing N N 255 PRO N CA sing N N 256 PRO N CD sing N N 257 PRO N H sing N N 258 PRO CA C sing N N 259 PRO CA CB sing N N 260 PRO CA HA sing N N 261 PRO C O doub N N 262 PRO C OXT sing N N 263 PRO CB CG sing N N 264 PRO CB HB2 sing N N 265 PRO CB HB3 sing N N 266 PRO CG CD sing N N 267 PRO CG HG2 sing N N 268 PRO CG HG3 sing N N 269 PRO CD HD2 sing N N 270 PRO CD HD3 sing N N 271 PRO OXT HXT sing N N 272 SAH N CA sing N N 273 SAH N HN1 sing N N 274 SAH N HN2 sing N N 275 SAH CA CB sing N N 276 SAH CA C sing N N 277 SAH CA HA sing N N 278 SAH CB CG sing N N 279 SAH CB HB1 sing N N 280 SAH CB HB2 sing N N 281 SAH CG SD sing N N 282 SAH CG HG1 sing N N 283 SAH CG HG2 sing N N 284 SAH SD "C5'" sing N N 285 SAH C O doub N N 286 SAH C OXT sing N N 287 SAH OXT HXT sing N N 288 SAH "C5'" "C4'" sing N N 289 SAH "C5'" "H5'1" sing N N 290 SAH "C5'" "H5'2" sing N N 291 SAH "C4'" "O4'" sing N N 292 SAH "C4'" "C3'" sing N N 293 SAH "C4'" "H4'" sing N N 294 SAH "O4'" "C1'" sing N N 295 SAH "C3'" "O3'" sing N N 296 SAH "C3'" "C2'" sing N N 297 SAH "C3'" "H3'" sing N N 298 SAH "O3'" "HO3'" sing N N 299 SAH "C2'" "O2'" sing N N 300 SAH "C2'" "C1'" sing N N 301 SAH "C2'" "H2'" sing N N 302 SAH "O2'" "HO2'" sing N N 303 SAH "C1'" N9 sing N N 304 SAH "C1'" "H1'" sing N N 305 SAH N9 C8 sing Y N 306 SAH N9 C4 sing Y N 307 SAH C8 N7 doub Y N 308 SAH C8 H8 sing N N 309 SAH N7 C5 sing Y N 310 SAH C5 C6 sing Y N 311 SAH C5 C4 doub Y N 312 SAH C6 N6 sing N N 313 SAH C6 N1 doub Y N 314 SAH N6 HN61 sing N N 315 SAH N6 HN62 sing N N 316 SAH N1 C2 sing Y N 317 SAH C2 N3 doub Y N 318 SAH C2 H2 sing N N 319 SAH N3 C4 sing Y N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 SO4 S O1 doub N N 334 SO4 S O2 doub N N 335 SO4 S O3 sing N N 336 SO4 S O4 sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GIW _pdbx_initial_refinement_model.details 'PDB entry 3GIW' #