data_3HC8 # _entry.id 3HC8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3HC8 pdb_00003hc8 10.2210/pdb3hc8/pdb RCSB RCSB052956 ? ? WWPDB D_1000052956 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2h40 . unspecified PDB 2h42 . unspecified PDB 2h44 . unspecified PDB 3bjc . unspecified PDB 1uho . unspecified PDB 2chm . unspecified PDB 3HDZ . unspecified # _pdbx_database_status.entry_id 3HC8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-05-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hughes, R.O.' 1 'Stallings, W.C.' 2 'Cubbage, J.W.' 3 'Williams, J.M.' 4 # _citation.id primary _citation.title 'Investigation of aminopyridiopyrazinones as PDE5 inhibitors: Evaluation of modifications to the central ring system.' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 19 _citation.page_first 4092 _citation.page_last 4096 _citation.year 2009 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 1464-3405 _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19539468 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2009.06.004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hughes, R.O.' 1 ? primary 'Walker, J.K.' 2 ? primary 'Cubbage, J.W.' 3 ? primary 'Fobian, Y.M.' 4 ? primary 'Rogier, D.J.' 5 ? primary 'Heasley, S.E.' 6 ? primary 'Blevis-Bal, R.M.' 7 ? primary 'Benson, A.G.' 8 ? primary 'Owen, D.R.' 9 ? primary 'Jacobsen, E.J.' 10 ? primary 'Freskos, J.N.' 11 ? primary 'Molyneaux, J.M.' 12 ? primary 'Brown, D.L.' 13 ? primary 'Stallings, W.C.' 14 ? primary 'Acker, B.A.' 15 ? primary 'Maddux, T.M.' 16 ? primary 'Tollefson, M.B.' 17 ? primary 'Williams, J.M.' 18 ? primary 'Moon, J.B.' 19 ? primary 'Mischke, B.V.' 20 ? primary 'Rumsey, J.M.' 21 ? primary 'Zheng, Y.' 22 ? primary 'Macinnes, A.' 23 ? primary 'Bond, B.R.' 24 ? primary 'Yu, Y.' 25 ? # _cell.length_a 54.691 _cell.length_b 77.085 _cell.length_c 77.514 _cell.angle_alpha 90.000 _cell.angle_beta 101.930 _cell.angle_gamma 90.000 _cell.entry_id 3HC8 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3HC8 _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;cGMP-specific 3',5'-cyclic phosphodiesterase,cAMP-specific 3',5'-cyclic phosphodiesterase 4A ; 37351.988 1 3.1.4.35,3.1.4.53,3.1.4.35 ? 'PDE4A residues 456-480, PDE5A residues 536-657 682-858' ? 2 non-polymer syn '6-(6-methoxypyridin-3-yl)-2-[(2-morpholin-4-ylethyl)amino]-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one' 468.549 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 174 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'cGMP-binding cGMP-specific phosphodiesterase,CGB-PDE,DPDE2,PDE46,cGMP-binding cGMP-specific phosphodiesterase,CGB-PDE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ETRELQSLAAAVVPSAQTLKITDFSFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRWILSVKKNYRKNVAYHNW RHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQFLINTNSELALMYNDESVLEHHHFDQCLMILN SPGNQILSGLSIEEYKTTLKIIKQAILATDLALYIKRRGEFFELIRKNQFNLEDPHEKELFLAMLMTACDLSAITKPWPI QQRIAELVATEFFDQGDRERKELNIEPTDLMNREKKNKIPSMQVGFIDAICLQLYEALTHVSEDCFPLLDGCRKNRQKWQ ALAE ; _entity_poly.pdbx_seq_one_letter_code_can ;ETRELQSLAAAVVPSAQTLKITDFSFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRWILSVKKNYRKNVAYHNW RHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQFLINTNSELALMYNDESVLEHHHFDQCLMILN SPGNQILSGLSIEEYKTTLKIIKQAILATDLALYIKRRGEFFELIRKNQFNLEDPHEKELFLAMLMTACDLSAITKPWPI QQRIAELVATEFFDQGDRERKELNIEPTDLMNREKKNKIPSMQVGFIDAICLQLYEALTHVSEDCFPLLDGCRKNRQKWQ ALAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 ARG n 1 4 GLU n 1 5 LEU n 1 6 GLN n 1 7 SER n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 VAL n 1 13 VAL n 1 14 PRO n 1 15 SER n 1 16 ALA n 1 17 GLN n 1 18 THR n 1 19 LEU n 1 20 LYS n 1 21 ILE n 1 22 THR n 1 23 ASP n 1 24 PHE n 1 25 SER n 1 26 PHE n 1 27 SER n 1 28 ASP n 1 29 PHE n 1 30 GLU n 1 31 LEU n 1 32 SER n 1 33 ASP n 1 34 LEU n 1 35 GLU n 1 36 THR n 1 37 ALA n 1 38 LEU n 1 39 CYS n 1 40 THR n 1 41 ILE n 1 42 ARG n 1 43 MET n 1 44 PHE n 1 45 THR n 1 46 ASP n 1 47 LEU n 1 48 ASN n 1 49 LEU n 1 50 VAL n 1 51 GLN n 1 52 ASN n 1 53 PHE n 1 54 GLN n 1 55 MET n 1 56 LYS n 1 57 HIS n 1 58 GLU n 1 59 VAL n 1 60 LEU n 1 61 CYS n 1 62 ARG n 1 63 TRP n 1 64 ILE n 1 65 LEU n 1 66 SER n 1 67 VAL n 1 68 LYS n 1 69 LYS n 1 70 ASN n 1 71 TYR n 1 72 ARG n 1 73 LYS n 1 74 ASN n 1 75 VAL n 1 76 ALA n 1 77 TYR n 1 78 HIS n 1 79 ASN n 1 80 TRP n 1 81 ARG n 1 82 HIS n 1 83 ALA n 1 84 PHE n 1 85 ASN n 1 86 THR n 1 87 ALA n 1 88 GLN n 1 89 CYS n 1 90 MET n 1 91 PHE n 1 92 ALA n 1 93 ALA n 1 94 LEU n 1 95 LYS n 1 96 ALA n 1 97 GLY n 1 98 LYS n 1 99 ILE n 1 100 GLN n 1 101 ASN n 1 102 LYS n 1 103 LEU n 1 104 THR n 1 105 ASP n 1 106 LEU n 1 107 GLU n 1 108 ILE n 1 109 LEU n 1 110 ALA n 1 111 LEU n 1 112 LEU n 1 113 ILE n 1 114 ALA n 1 115 ALA n 1 116 LEU n 1 117 SER n 1 118 HIS n 1 119 ASP n 1 120 LEU n 1 121 ASP n 1 122 HIS n 1 123 PRO n 1 124 GLY n 1 125 VAL n 1 126 SER n 1 127 ASN n 1 128 GLN n 1 129 PHE n 1 130 LEU n 1 131 ILE n 1 132 ASN n 1 133 THR n 1 134 ASN n 1 135 SER n 1 136 GLU n 1 137 LEU n 1 138 ALA n 1 139 LEU n 1 140 MET n 1 141 TYR n 1 142 ASN n 1 143 ASP n 1 144 GLU n 1 145 SER n 1 146 VAL n 1 147 LEU n 1 148 GLU n 1 149 HIS n 1 150 HIS n 1 151 HIS n 1 152 PHE n 1 153 ASP n 1 154 GLN n 1 155 CYS n 1 156 LEU n 1 157 MET n 1 158 ILE n 1 159 LEU n 1 160 ASN n 1 161 SER n 1 162 PRO n 1 163 GLY n 1 164 ASN n 1 165 GLN n 1 166 ILE n 1 167 LEU n 1 168 SER n 1 169 GLY n 1 170 LEU n 1 171 SER n 1 172 ILE n 1 173 GLU n 1 174 GLU n 1 175 TYR n 1 176 LYS n 1 177 THR n 1 178 THR n 1 179 LEU n 1 180 LYS n 1 181 ILE n 1 182 ILE n 1 183 LYS n 1 184 GLN n 1 185 ALA n 1 186 ILE n 1 187 LEU n 1 188 ALA n 1 189 THR n 1 190 ASP n 1 191 LEU n 1 192 ALA n 1 193 LEU n 1 194 TYR n 1 195 ILE n 1 196 LYS n 1 197 ARG n 1 198 ARG n 1 199 GLY n 1 200 GLU n 1 201 PHE n 1 202 PHE n 1 203 GLU n 1 204 LEU n 1 205 ILE n 1 206 ARG n 1 207 LYS n 1 208 ASN n 1 209 GLN n 1 210 PHE n 1 211 ASN n 1 212 LEU n 1 213 GLU n 1 214 ASP n 1 215 PRO n 1 216 HIS n 1 217 GLU n 1 218 LYS n 1 219 GLU n 1 220 LEU n 1 221 PHE n 1 222 LEU n 1 223 ALA n 1 224 MET n 1 225 LEU n 1 226 MET n 1 227 THR n 1 228 ALA n 1 229 CYS n 1 230 ASP n 1 231 LEU n 1 232 SER n 1 233 ALA n 1 234 ILE n 1 235 THR n 1 236 LYS n 1 237 PRO n 1 238 TRP n 1 239 PRO n 1 240 ILE n 1 241 GLN n 1 242 GLN n 1 243 ARG n 1 244 ILE n 1 245 ALA n 1 246 GLU n 1 247 LEU n 1 248 VAL n 1 249 ALA n 1 250 THR n 1 251 GLU n 1 252 PHE n 1 253 PHE n 1 254 ASP n 1 255 GLN n 1 256 GLY n 1 257 ASP n 1 258 ARG n 1 259 GLU n 1 260 ARG n 1 261 LYS n 1 262 GLU n 1 263 LEU n 1 264 ASN n 1 265 ILE n 1 266 GLU n 1 267 PRO n 1 268 THR n 1 269 ASP n 1 270 LEU n 1 271 MET n 1 272 ASN n 1 273 ARG n 1 274 GLU n 1 275 LYS n 1 276 LYS n 1 277 ASN n 1 278 LYS n 1 279 ILE n 1 280 PRO n 1 281 SER n 1 282 MET n 1 283 GLN n 1 284 VAL n 1 285 GLY n 1 286 PHE n 1 287 ILE n 1 288 ASP n 1 289 ALA n 1 290 ILE n 1 291 CYS n 1 292 LEU n 1 293 GLN n 1 294 LEU n 1 295 TYR n 1 296 GLU n 1 297 ALA n 1 298 LEU n 1 299 THR n 1 300 HIS n 1 301 VAL n 1 302 SER n 1 303 GLU n 1 304 ASP n 1 305 CYS n 1 306 PHE n 1 307 PRO n 1 308 LEU n 1 309 LEU n 1 310 ASP n 1 311 GLY n 1 312 CYS n 1 313 ARG n 1 314 LYS n 1 315 ASN n 1 316 ARG n 1 317 GLN n 1 318 LYS n 1 319 TRP n 1 320 GLN n 1 321 ALA n 1 322 LEU n 1 323 ALA n 1 324 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 122 Human ? 'PDE5A, PDE5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? High5 ? ? ? ? ? ? ? Baculovirus ? ? ? Fastbac ? 'Residues 658-682 from PDE4' 1 2 sample 'Biological sequence' 123 147 Human ? 'PDE4A, DPDE2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? High5 ? ? ? ? ? ? ? Baculovirus ? ? ? Fastbac ? 'Residues 658-682 from PDE4' 1 3 sample 'Biological sequence' 148 324 Human ? 'PDE5A, PDE5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? High5 ? ? ? ? ? ? ? Baculovirus ? ? ? Fastbac ? 'Residues 658-682 from PDE4' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PDE5A_HUMAN O76074 ? 1 ;ETRELQSLAAAVVPSAQTLKITDFSFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRWILSVKKNYRKNVAYHNW RHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDH ; 536 2 UNP PDE4A_HUMAN P27815 P27815-7 1 PGVSNQFLINTNSELALMYNDESVL 456 3 UNP PDE5A_HUMAN O76074 ? 1 ;EHHHFDQCLMILNSPGNQILSGLSIEEYKTTLKIIKQAILATDLALYIKRRGEFFELIRKNQFNLEDPHQKELFLAMLMT ACDLSAITKPWPIQQRIAELVATEFFDQGDRERKELNIEPTDLMNREKKNKIPSMQVGFIDAICLQLYEALTHVSEDCFP LLDGCRKNRQKWQALAE ; 682 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3HC8 A 1 ? 122 ? O76074 536 ? 657 ? 536 657 2 2 3HC8 A 123 ? 147 A P27815 456 ? 480 ? 658 681 3 3 3HC8 A 148 ? 324 ? O76074 682 ? 858 ? 682 858 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 3HC8 _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 217 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O76074 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 751 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 751 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PD4 non-polymer . '6-(6-methoxypyridin-3-yl)-2-[(2-morpholin-4-ylethyl)amino]-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one' ? 'C24 H32 N6 O4' 468.549 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 3HC8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.52 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-06-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3HC8 _reflns.d_resolution_high 1.79 _reflns.d_resolution_low 19.270 _reflns.limit_h_max 29 _reflns.limit_h_min -30 _reflns.limit_k_max 42 _reflns.limit_k_min 0 _reflns.limit_l_max 43 _reflns.limit_l_min 0 _reflns.number_all ? _reflns.number_obs 26091 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 88.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.038 _reflns.pdbx_netI_over_sigmaI 24.3 _reflns.B_iso_Wilson_estimate 33.3 _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 89.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 1.60 _reflns_shell.pdbx_Rsym_value 0.410 _reflns_shell.pdbx_redundancy 2.3 _reflns_shell.number_unique_all 2610 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3HC8 _refine.ls_d_res_high 1.790 _refine.ls_d_res_low 19.27 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 88.290 _refine.ls_number_reflns_obs 26091 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_R_work 0.196 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.230 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1320 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 39.805 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.720 _refine.aniso_B[2][2] -0.270 _refine.aniso_B[3][3] 1.950 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 2.340 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.172 _refine.pdbx_overall_ESU_R_Free 0.148 _refine.overall_SU_ML 0.111 _refine.overall_SU_B 3.662 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 78.26 _refine.B_iso_min 27.19 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2628 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 2839 _refine_hist.d_res_high 1.790 _refine_hist.d_res_low 19.27 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2715 0.009 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1820 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3669 1.088 1.973 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4456 0.866 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 325 4.989 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 132 37.241 24.924 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 502 13.862 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15 13.863 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 412 0.057 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2965 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 524 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 673 0.221 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1861 0.185 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1362 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1269 0.085 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 108 0.128 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 16 0.212 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 45 0.214 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 6 0.132 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1721 0.671 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 647 0.126 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2633 1.023 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1172 1.636 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1035 2.641 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.79 _refine_ls_shell.d_res_low 1.839 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 82.180 _refine_ls_shell.number_reflns_R_work 1705 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.287 _refine_ls_shell.R_factor_R_free 0.349 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1775 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3HC8 _struct.title 'Investigation of Aminopyridiopyrazinones as PDE5 Inhibitors: Evaluation of Modifications to the Central Ring System.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3HC8 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;PDE5, PDE-5, inhibition, Alternative splicing, cAMP, Hydrolase, Phosphoprotein, Polymorphism Allosteric enzyme, cGMP, cGMP-binding, Magnesium, Metal-binding, Nucleotide-binding, Zinc ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 1 ? ALA A 11 ? GLU A 536 ALA A 546 1 ? 11 HELX_P HELX_P2 2 SER A 15 ? LYS A 20 ? SER A 550 LYS A 555 1 ? 6 HELX_P HELX_P3 3 SER A 32 ? LEU A 47 ? SER A 567 LEU A 582 1 ? 16 HELX_P HELX_P4 4 ASN A 48 ? PHE A 53 ? ASN A 583 PHE A 588 1 ? 6 HELX_P HELX_P5 5 LYS A 56 ? ASN A 70 ? LYS A 591 ASN A 605 1 ? 15 HELX_P HELX_P6 6 ASN A 79 ? LYS A 95 ? ASN A 614 LYS A 630 1 ? 17 HELX_P HELX_P7 7 ILE A 99 ? LEU A 103 ? ILE A 634 LEU A 638 5 ? 5 HELX_P HELX_P8 8 THR A 104 ? HIS A 118 ? THR A 639 HIS A 653 1 ? 15 HELX_P HELX_P9 9 SER A 126 ? THR A 133 ? SER A 661 THR A 668 1 ? 8 HELX_P HELX_P10 10 SER A 135 ? TYR A 141 ? SER A 670 TYR A 676 1 ? 7 HELX_P HELX_P11 11 SER A 145 ? ASN A 160 ? SER A 680 ASN A 694 1 ? 16 HELX_P HELX_P12 12 SER A 171 ? ALA A 188 ? SER A 705 ALA A 722 1 ? 18 HELX_P HELX_P13 13 ASP A 190 ? LYS A 207 ? ASP A 724 LYS A 741 1 ? 18 HELX_P HELX_P14 14 ASP A 214 ? LEU A 231 ? ASP A 748 LEU A 765 1 ? 18 HELX_P HELX_P15 15 SER A 232 ? LYS A 236 ? SER A 766 LYS A 770 5 ? 5 HELX_P HELX_P16 16 PRO A 237 ? ASN A 264 ? PRO A 771 ASN A 798 1 ? 28 HELX_P HELX_P17 17 THR A 268 ? ASN A 277 ? THR A 802 ASN A 811 5 ? 10 HELX_P HELX_P18 18 LYS A 278 ? ILE A 290 ? LYS A 812 ILE A 824 1 ? 13 HELX_P HELX_P19 19 ILE A 290 ? SER A 302 ? ILE A 824 SER A 836 1 ? 13 HELX_P HELX_P20 20 CYS A 305 ? GLU A 324 ? CYS A 839 GLU A 858 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? F HOH . O ? ? ? 1_555 C ZN . ZN ? ? A HOH 13 A ZN 864 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc2 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 13 A MG 865 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc3 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 88 A MG 865 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc4 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 463 A MG 865 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc5 metalc ? ? F HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 465 A MG 865 1_555 ? ? ? ? ? ? ? 2.198 ? ? metalc6 metalc ? ? A HIS 82 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 617 A ZN 864 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc7 metalc ? ? A HIS 118 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 653 A ZN 864 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc8 metalc ? ? A ASP 119 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 654 A ZN 864 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc9 metalc ? ? A ASP 119 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 654 A MG 865 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc10 metalc ? ? A ASP 230 OD1 ? ? ? 1_555 C ZN . ZN ? ? A ASP 764 A ZN 864 1_555 ? ? ? ? ? ? ? 2.147 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PD4 901 ? 13 'BINDING SITE FOR RESIDUE PD4 A 901' AC2 Software A ZN 864 ? 5 'BINDING SITE FOR RESIDUE ZN A 864' AC3 Software A MG 865 ? 5 'BINDING SITE FOR RESIDUE MG A 865' AC4 Software A MG 1 ? 4 'BINDING SITE FOR RESIDUE MG A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 HOH F . ? HOH A 78 . ? 1_555 ? 2 AC1 13 HOH F . ? HOH A 405 . ? 1_555 ? 3 AC1 13 ALA A 10 ? ALA A 545 . ? 3_545 ? 4 AC1 13 TYR A 77 ? TYR A 612 . ? 1_555 ? 5 AC1 13 ILE A 195 ? ILE A 729 . ? 1_555 ? 6 AC1 13 ALA A 233 ? ALA A 767 . ? 1_555 ? 7 AC1 13 ILE A 234 ? ILE A 768 . ? 1_555 ? 8 AC1 13 GLN A 241 ? GLN A 775 . ? 1_555 ? 9 AC1 13 VAL A 248 ? VAL A 782 . ? 1_555 ? 10 AC1 13 LEU A 270 ? LEU A 804 . ? 1_555 ? 11 AC1 13 GLN A 283 ? GLN A 817 . ? 1_555 ? 12 AC1 13 PHE A 286 ? PHE A 820 . ? 1_555 ? 13 AC1 13 HOH F . ? HOH A 878 . ? 1_555 ? 14 AC2 5 HOH F . ? HOH A 13 . ? 1_555 ? 15 AC2 5 HIS A 82 ? HIS A 617 . ? 1_555 ? 16 AC2 5 HIS A 118 ? HIS A 653 . ? 1_555 ? 17 AC2 5 ASP A 119 ? ASP A 654 . ? 1_555 ? 18 AC2 5 ASP A 230 ? ASP A 764 . ? 1_555 ? 19 AC3 5 HOH F . ? HOH A 13 . ? 1_555 ? 20 AC3 5 HOH F . ? HOH A 88 . ? 1_555 ? 21 AC3 5 HOH F . ? HOH A 463 . ? 1_555 ? 22 AC3 5 HOH F . ? HOH A 465 . ? 1_555 ? 23 AC3 5 ASP A 119 ? ASP A 654 . ? 1_555 ? 24 AC4 4 PHE A 53 ? PHE A 588 . ? 2_556 ? 25 AC4 4 SER A 171 ? SER A 705 . ? 1_555 ? 26 AC4 4 GLU A 173 ? GLU A 707 . ? 1_555 ? 27 AC4 4 GLU A 174 ? GLU A 708 . ? 2_556 ? # _atom_sites.entry_id 3HC8 _atom_sites.fract_transf_matrix[1][1] 0.018285 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003862 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012973 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013186 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 536 536 GLU GLU A . n A 1 2 THR 2 537 537 THR THR A . n A 1 3 ARG 3 538 538 ARG ARG A . n A 1 4 GLU 4 539 539 GLU GLU A . n A 1 5 LEU 5 540 540 LEU LEU A . n A 1 6 GLN 6 541 541 GLN GLN A . n A 1 7 SER 7 542 542 SER SER A . n A 1 8 LEU 8 543 543 LEU LEU A . n A 1 9 ALA 9 544 544 ALA ALA A . n A 1 10 ALA 10 545 545 ALA ALA A . n A 1 11 ALA 11 546 546 ALA ALA A . n A 1 12 VAL 12 547 547 VAL VAL A . n A 1 13 VAL 13 548 548 VAL VAL A . n A 1 14 PRO 14 549 549 PRO PRO A . n A 1 15 SER 15 550 550 SER SER A . n A 1 16 ALA 16 551 551 ALA ALA A . n A 1 17 GLN 17 552 552 GLN GLN A . n A 1 18 THR 18 553 553 THR THR A . n A 1 19 LEU 19 554 554 LEU LEU A . n A 1 20 LYS 20 555 555 LYS LYS A . n A 1 21 ILE 21 556 556 ILE ILE A . n A 1 22 THR 22 557 557 THR THR A . n A 1 23 ASP 23 558 558 ASP ASP A . n A 1 24 PHE 24 559 559 PHE PHE A . n A 1 25 SER 25 560 560 SER SER A . n A 1 26 PHE 26 561 561 PHE PHE A . n A 1 27 SER 27 562 562 SER SER A . n A 1 28 ASP 28 563 563 ASP ASP A . n A 1 29 PHE 29 564 564 PHE PHE A . n A 1 30 GLU 30 565 565 GLU GLU A . n A 1 31 LEU 31 566 566 LEU LEU A . n A 1 32 SER 32 567 567 SER SER A . n A 1 33 ASP 33 568 568 ASP ASP A . n A 1 34 LEU 34 569 569 LEU LEU A . n A 1 35 GLU 35 570 570 GLU GLU A . n A 1 36 THR 36 571 571 THR THR A . n A 1 37 ALA 37 572 572 ALA ALA A . n A 1 38 LEU 38 573 573 LEU LEU A . n A 1 39 CYS 39 574 574 CYS CYS A . n A 1 40 THR 40 575 575 THR THR A . n A 1 41 ILE 41 576 576 ILE ILE A . n A 1 42 ARG 42 577 577 ARG ARG A . n A 1 43 MET 43 578 578 MET MET A . n A 1 44 PHE 44 579 579 PHE PHE A . n A 1 45 THR 45 580 580 THR THR A . n A 1 46 ASP 46 581 581 ASP ASP A . n A 1 47 LEU 47 582 582 LEU LEU A . n A 1 48 ASN 48 583 583 ASN ASN A . n A 1 49 LEU 49 584 584 LEU LEU A . n A 1 50 VAL 50 585 585 VAL VAL A . n A 1 51 GLN 51 586 586 GLN GLN A . n A 1 52 ASN 52 587 587 ASN ASN A . n A 1 53 PHE 53 588 588 PHE PHE A . n A 1 54 GLN 54 589 589 GLN GLN A . n A 1 55 MET 55 590 590 MET MET A . n A 1 56 LYS 56 591 591 LYS LYS A . n A 1 57 HIS 57 592 592 HIS HIS A . n A 1 58 GLU 58 593 593 GLU GLU A . n A 1 59 VAL 59 594 594 VAL VAL A . n A 1 60 LEU 60 595 595 LEU LEU A . n A 1 61 CYS 61 596 596 CYS CYS A . n A 1 62 ARG 62 597 597 ARG ARG A . n A 1 63 TRP 63 598 598 TRP TRP A . n A 1 64 ILE 64 599 599 ILE ILE A . n A 1 65 LEU 65 600 600 LEU LEU A . n A 1 66 SER 66 601 601 SER SER A . n A 1 67 VAL 67 602 602 VAL VAL A . n A 1 68 LYS 68 603 603 LYS LYS A . n A 1 69 LYS 69 604 604 LYS LYS A . n A 1 70 ASN 70 605 605 ASN ASN A . n A 1 71 TYR 71 606 606 TYR TYR A . n A 1 72 ARG 72 607 607 ARG ARG A . n A 1 73 LYS 73 608 608 LYS LYS A . n A 1 74 ASN 74 609 609 ASN ASN A . n A 1 75 VAL 75 610 610 VAL VAL A . n A 1 76 ALA 76 611 611 ALA ALA A . n A 1 77 TYR 77 612 612 TYR TYR A . n A 1 78 HIS 78 613 613 HIS HIS A . n A 1 79 ASN 79 614 614 ASN ASN A . n A 1 80 TRP 80 615 615 TRP TRP A . n A 1 81 ARG 81 616 616 ARG ARG A . n A 1 82 HIS 82 617 617 HIS HIS A . n A 1 83 ALA 83 618 618 ALA ALA A . n A 1 84 PHE 84 619 619 PHE PHE A . n A 1 85 ASN 85 620 620 ASN ASN A . n A 1 86 THR 86 621 621 THR THR A . n A 1 87 ALA 87 622 622 ALA ALA A . n A 1 88 GLN 88 623 623 GLN GLN A . n A 1 89 CYS 89 624 624 CYS CYS A . n A 1 90 MET 90 625 625 MET MET A . n A 1 91 PHE 91 626 626 PHE PHE A . n A 1 92 ALA 92 627 627 ALA ALA A . n A 1 93 ALA 93 628 628 ALA ALA A . n A 1 94 LEU 94 629 629 LEU LEU A . n A 1 95 LYS 95 630 630 LYS LYS A . n A 1 96 ALA 96 631 631 ALA ALA A . n A 1 97 GLY 97 632 632 GLY GLY A . n A 1 98 LYS 98 633 633 LYS LYS A . n A 1 99 ILE 99 634 634 ILE ILE A . n A 1 100 GLN 100 635 635 GLN GLN A . n A 1 101 ASN 101 636 636 ASN ASN A . n A 1 102 LYS 102 637 637 LYS LYS A . n A 1 103 LEU 103 638 638 LEU LEU A . n A 1 104 THR 104 639 639 THR THR A . n A 1 105 ASP 105 640 640 ASP ASP A . n A 1 106 LEU 106 641 641 LEU LEU A . n A 1 107 GLU 107 642 642 GLU GLU A . n A 1 108 ILE 108 643 643 ILE ILE A . n A 1 109 LEU 109 644 644 LEU LEU A . n A 1 110 ALA 110 645 645 ALA ALA A . n A 1 111 LEU 111 646 646 LEU LEU A . n A 1 112 LEU 112 647 647 LEU LEU A . n A 1 113 ILE 113 648 648 ILE ILE A . n A 1 114 ALA 114 649 649 ALA ALA A . n A 1 115 ALA 115 650 650 ALA ALA A . n A 1 116 LEU 116 651 651 LEU LEU A . n A 1 117 SER 117 652 652 SER SER A . n A 1 118 HIS 118 653 653 HIS HIS A . n A 1 119 ASP 119 654 654 ASP ASP A . n A 1 120 LEU 120 655 655 LEU LEU A . n A 1 121 ASP 121 656 656 ASP ASP A . n A 1 122 HIS 122 657 657 HIS HIS A . n A 1 123 PRO 123 658 658 PRO PRO A . n A 1 124 GLY 124 659 659 GLY GLY A . n A 1 125 VAL 125 660 660 VAL VAL A . n A 1 126 SER 126 661 661 SER SER A . n A 1 127 ASN 127 662 662 ASN ASN A . n A 1 128 GLN 128 663 663 GLN GLN A . n A 1 129 PHE 129 664 664 PHE PHE A . n A 1 130 LEU 130 665 665 LEU LEU A . n A 1 131 ILE 131 666 666 ILE ILE A . n A 1 132 ASN 132 667 667 ASN ASN A . n A 1 133 THR 133 668 668 THR THR A . n A 1 134 ASN 134 669 669 ASN ASN A . n A 1 135 SER 135 670 670 SER SER A . n A 1 136 GLU 136 671 671 GLU GLU A . n A 1 137 LEU 137 672 672 LEU LEU A . n A 1 138 ALA 138 673 673 ALA ALA A . n A 1 139 LEU 139 674 674 LEU LEU A . n A 1 140 MET 140 675 675 MET MET A . n A 1 141 TYR 141 676 676 TYR TYR A . n A 1 142 ASN 142 677 677 ASN ASN A . n A 1 143 ASP 143 678 678 ASP ASP A . n A 1 144 GLU 144 679 679 GLU GLU A . n A 1 145 SER 145 680 680 SER SER A . n A 1 146 VAL 146 681 681 VAL VAL A . n A 1 147 LEU 147 681 681 LEU LEU A A n A 1 148 GLU 148 682 682 GLU GLU A . n A 1 149 HIS 149 683 683 HIS HIS A . n A 1 150 HIS 150 684 684 HIS HIS A . n A 1 151 HIS 151 685 685 HIS HIS A . n A 1 152 PHE 152 686 686 PHE PHE A . n A 1 153 ASP 153 687 687 ASP ASP A . n A 1 154 GLN 154 688 688 GLN GLN A . n A 1 155 CYS 155 689 689 CYS CYS A . n A 1 156 LEU 156 690 690 LEU LEU A . n A 1 157 MET 157 691 691 MET MET A . n A 1 158 ILE 158 692 692 ILE ILE A . n A 1 159 LEU 159 693 693 LEU LEU A . n A 1 160 ASN 160 694 694 ASN ASN A . n A 1 161 SER 161 695 695 SER SER A . n A 1 162 PRO 162 696 696 PRO PRO A . n A 1 163 GLY 163 697 697 GLY GLY A . n A 1 164 ASN 164 698 698 ASN ASN A . n A 1 165 GLN 165 699 699 GLN GLN A . n A 1 166 ILE 166 700 700 ILE ILE A . n A 1 167 LEU 167 701 701 LEU LEU A . n A 1 168 SER 168 702 702 SER SER A . n A 1 169 GLY 169 703 703 GLY GLY A . n A 1 170 LEU 170 704 704 LEU LEU A . n A 1 171 SER 171 705 705 SER SER A . n A 1 172 ILE 172 706 706 ILE ILE A . n A 1 173 GLU 173 707 707 GLU GLU A . n A 1 174 GLU 174 708 708 GLU GLU A . n A 1 175 TYR 175 709 709 TYR TYR A . n A 1 176 LYS 176 710 710 LYS LYS A . n A 1 177 THR 177 711 711 THR THR A . n A 1 178 THR 178 712 712 THR THR A . n A 1 179 LEU 179 713 713 LEU LEU A . n A 1 180 LYS 180 714 714 LYS LYS A . n A 1 181 ILE 181 715 715 ILE ILE A . n A 1 182 ILE 182 716 716 ILE ILE A . n A 1 183 LYS 183 717 717 LYS LYS A . n A 1 184 GLN 184 718 718 GLN GLN A . n A 1 185 ALA 185 719 719 ALA ALA A . n A 1 186 ILE 186 720 720 ILE ILE A . n A 1 187 LEU 187 721 721 LEU LEU A . n A 1 188 ALA 188 722 722 ALA ALA A . n A 1 189 THR 189 723 723 THR THR A . n A 1 190 ASP 190 724 724 ASP ASP A . n A 1 191 LEU 191 725 725 LEU LEU A . n A 1 192 ALA 192 726 726 ALA ALA A . n A 1 193 LEU 193 727 727 LEU LEU A . n A 1 194 TYR 194 728 728 TYR TYR A . n A 1 195 ILE 195 729 729 ILE ILE A . n A 1 196 LYS 196 730 730 LYS LYS A . n A 1 197 ARG 197 731 731 ARG ARG A . n A 1 198 ARG 198 732 732 ARG ARG A . n A 1 199 GLY 199 733 733 GLY GLY A . n A 1 200 GLU 200 734 734 GLU GLU A . n A 1 201 PHE 201 735 735 PHE PHE A . n A 1 202 PHE 202 736 736 PHE PHE A . n A 1 203 GLU 203 737 737 GLU GLU A . n A 1 204 LEU 204 738 738 LEU LEU A . n A 1 205 ILE 205 739 739 ILE ILE A . n A 1 206 ARG 206 740 740 ARG ARG A . n A 1 207 LYS 207 741 741 LYS LYS A . n A 1 208 ASN 208 742 742 ASN ASN A . n A 1 209 GLN 209 743 743 GLN GLN A . n A 1 210 PHE 210 744 744 PHE PHE A . n A 1 211 ASN 211 745 745 ASN ASN A . n A 1 212 LEU 212 746 746 LEU LEU A . n A 1 213 GLU 213 747 747 GLU GLU A . n A 1 214 ASP 214 748 748 ASP ASP A . n A 1 215 PRO 215 749 749 PRO PRO A . n A 1 216 HIS 216 750 750 HIS HIS A . n A 1 217 GLU 217 751 751 GLU GLU A . n A 1 218 LYS 218 752 752 LYS LYS A . n A 1 219 GLU 219 753 753 GLU GLU A . n A 1 220 LEU 220 754 754 LEU LEU A . n A 1 221 PHE 221 755 755 PHE PHE A . n A 1 222 LEU 222 756 756 LEU LEU A . n A 1 223 ALA 223 757 757 ALA ALA A . n A 1 224 MET 224 758 758 MET MET A . n A 1 225 LEU 225 759 759 LEU LEU A . n A 1 226 MET 226 760 760 MET MET A . n A 1 227 THR 227 761 761 THR THR A . n A 1 228 ALA 228 762 762 ALA ALA A . n A 1 229 CYS 229 763 763 CYS CYS A . n A 1 230 ASP 230 764 764 ASP ASP A . n A 1 231 LEU 231 765 765 LEU LEU A . n A 1 232 SER 232 766 766 SER SER A . n A 1 233 ALA 233 767 767 ALA ALA A . n A 1 234 ILE 234 768 768 ILE ILE A . n A 1 235 THR 235 769 769 THR THR A . n A 1 236 LYS 236 770 770 LYS LYS A . n A 1 237 PRO 237 771 771 PRO PRO A . n A 1 238 TRP 238 772 772 TRP TRP A . n A 1 239 PRO 239 773 773 PRO PRO A . n A 1 240 ILE 240 774 774 ILE ILE A . n A 1 241 GLN 241 775 775 GLN GLN A . n A 1 242 GLN 242 776 776 GLN GLN A . n A 1 243 ARG 243 777 777 ARG ARG A . n A 1 244 ILE 244 778 778 ILE ILE A . n A 1 245 ALA 245 779 779 ALA ALA A . n A 1 246 GLU 246 780 780 GLU GLU A . n A 1 247 LEU 247 781 781 LEU LEU A . n A 1 248 VAL 248 782 782 VAL VAL A . n A 1 249 ALA 249 783 783 ALA ALA A . n A 1 250 THR 250 784 784 THR THR A . n A 1 251 GLU 251 785 785 GLU GLU A . n A 1 252 PHE 252 786 786 PHE PHE A . n A 1 253 PHE 253 787 787 PHE PHE A . n A 1 254 ASP 254 788 788 ASP ASP A . n A 1 255 GLN 255 789 789 GLN GLN A . n A 1 256 GLY 256 790 790 GLY GLY A . n A 1 257 ASP 257 791 791 ASP ASP A . n A 1 258 ARG 258 792 792 ARG ARG A . n A 1 259 GLU 259 793 793 GLU GLU A . n A 1 260 ARG 260 794 794 ARG ARG A . n A 1 261 LYS 261 795 795 LYS LYS A . n A 1 262 GLU 262 796 796 GLU GLU A . n A 1 263 LEU 263 797 797 LEU LEU A . n A 1 264 ASN 264 798 798 ASN ASN A . n A 1 265 ILE 265 799 799 ILE ILE A . n A 1 266 GLU 266 800 800 GLU GLU A . n A 1 267 PRO 267 801 801 PRO PRO A . n A 1 268 THR 268 802 802 THR THR A . n A 1 269 ASP 269 803 803 ASP ASP A . n A 1 270 LEU 270 804 804 LEU LEU A . n A 1 271 MET 271 805 805 MET MET A . n A 1 272 ASN 272 806 806 ASN ASN A . n A 1 273 ARG 273 807 807 ARG ARG A . n A 1 274 GLU 274 808 808 GLU GLU A . n A 1 275 LYS 275 809 809 LYS LYS A . n A 1 276 LYS 276 810 810 LYS LYS A . n A 1 277 ASN 277 811 811 ASN ASN A . n A 1 278 LYS 278 812 812 LYS LYS A . n A 1 279 ILE 279 813 813 ILE ILE A . n A 1 280 PRO 280 814 814 PRO PRO A . n A 1 281 SER 281 815 815 SER SER A . n A 1 282 MET 282 816 816 MET MET A . n A 1 283 GLN 283 817 817 GLN GLN A . n A 1 284 VAL 284 818 818 VAL VAL A . n A 1 285 GLY 285 819 819 GLY GLY A . n A 1 286 PHE 286 820 820 PHE PHE A . n A 1 287 ILE 287 821 821 ILE ILE A . n A 1 288 ASP 288 822 822 ASP ASP A . n A 1 289 ALA 289 823 823 ALA ALA A . n A 1 290 ILE 290 824 824 ILE ILE A . n A 1 291 CYS 291 825 825 CYS CYS A . n A 1 292 LEU 292 826 826 LEU LEU A . n A 1 293 GLN 293 827 827 GLN GLN A . n A 1 294 LEU 294 828 828 LEU LEU A . n A 1 295 TYR 295 829 829 TYR TYR A . n A 1 296 GLU 296 830 830 GLU GLU A . n A 1 297 ALA 297 831 831 ALA ALA A . n A 1 298 LEU 298 832 832 LEU LEU A . n A 1 299 THR 299 833 833 THR THR A . n A 1 300 HIS 300 834 834 HIS HIS A . n A 1 301 VAL 301 835 835 VAL VAL A . n A 1 302 SER 302 836 836 SER SER A . n A 1 303 GLU 303 837 837 GLU GLU A . n A 1 304 ASP 304 838 838 ASP ASP A . n A 1 305 CYS 305 839 839 CYS CYS A . n A 1 306 PHE 306 840 840 PHE PHE A . n A 1 307 PRO 307 841 841 PRO PRO A . n A 1 308 LEU 308 842 842 LEU LEU A . n A 1 309 LEU 309 843 843 LEU LEU A . n A 1 310 ASP 310 844 844 ASP ASP A . n A 1 311 GLY 311 845 845 GLY GLY A . n A 1 312 CYS 312 846 846 CYS CYS A . n A 1 313 ARG 313 847 847 ARG ARG A . n A 1 314 LYS 314 848 848 LYS LYS A . n A 1 315 ASN 315 849 849 ASN ASN A . n A 1 316 ARG 316 850 850 ARG ARG A . n A 1 317 GLN 317 851 851 GLN GLN A . n A 1 318 LYS 318 852 852 LYS LYS A . n A 1 319 TRP 319 853 853 TRP TRP A . n A 1 320 GLN 320 854 854 GLN GLN A . n A 1 321 ALA 321 855 855 ALA ALA A . n A 1 322 LEU 322 856 856 LEU LEU A . n A 1 323 ALA 323 857 857 ALA ALA A . n A 1 324 GLU 324 858 858 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PD4 1 901 901 PD4 PD4 A . C 3 ZN 1 864 864 ZN ZN A . D 4 MG 1 865 865 MG MG A . E 4 MG 1 1 1 MG MG A . F 5 HOH 1 2 2 HOH HOH A . F 5 HOH 2 3 3 HOH HOH A . F 5 HOH 3 4 4 HOH HOH A . F 5 HOH 4 5 5 HOH HOH A . F 5 HOH 5 6 6 HOH HOH A . F 5 HOH 6 7 7 HOH HOH A . F 5 HOH 7 8 8 HOH HOH A . F 5 HOH 8 9 9 HOH HOH A . F 5 HOH 9 10 10 HOH HOH A . F 5 HOH 10 11 11 HOH HOH A . F 5 HOH 11 12 12 HOH HOH A . F 5 HOH 12 13 13 HOH HOH A . F 5 HOH 13 14 14 HOH HOH A . F 5 HOH 14 15 15 HOH HOH A . F 5 HOH 15 16 16 HOH HOH A . F 5 HOH 16 17 17 HOH HOH A . F 5 HOH 17 18 18 HOH HOH A . F 5 HOH 18 19 19 HOH HOH A . F 5 HOH 19 20 20 HOH HOH A . F 5 HOH 20 21 21 HOH HOH A . F 5 HOH 21 22 22 HOH HOH A . F 5 HOH 22 23 23 HOH HOH A . F 5 HOH 23 24 24 HOH HOH A . F 5 HOH 24 25 25 HOH HOH A . F 5 HOH 25 26 26 HOH HOH A . F 5 HOH 26 27 27 HOH HOH A . F 5 HOH 27 28 28 HOH HOH A . F 5 HOH 28 29 29 HOH HOH A . F 5 HOH 29 30 30 HOH HOH A . F 5 HOH 30 31 31 HOH HOH A . F 5 HOH 31 32 32 HOH HOH A . F 5 HOH 32 33 33 HOH HOH A . F 5 HOH 33 34 34 HOH HOH A . F 5 HOH 34 36 36 HOH HOH A . F 5 HOH 35 37 37 HOH HOH A . F 5 HOH 36 38 38 HOH HOH A . F 5 HOH 37 39 39 HOH HOH A . F 5 HOH 38 40 40 HOH HOH A . F 5 HOH 39 41 41 HOH HOH A . F 5 HOH 40 42 42 HOH HOH A . F 5 HOH 41 43 43 HOH HOH A . F 5 HOH 42 44 44 HOH HOH A . F 5 HOH 43 45 45 HOH HOH A . F 5 HOH 44 46 46 HOH HOH A . F 5 HOH 45 47 47 HOH HOH A . F 5 HOH 46 48 48 HOH HOH A . F 5 HOH 47 50 50 HOH HOH A . F 5 HOH 48 51 51 HOH HOH A . F 5 HOH 49 52 52 HOH HOH A . F 5 HOH 50 53 53 HOH HOH A . F 5 HOH 51 54 54 HOH HOH A . F 5 HOH 52 55 55 HOH HOH A . F 5 HOH 53 56 56 HOH HOH A . F 5 HOH 54 57 57 HOH HOH A . F 5 HOH 55 58 58 HOH HOH A . F 5 HOH 56 59 59 HOH HOH A . F 5 HOH 57 60 60 HOH HOH A . F 5 HOH 58 61 61 HOH HOH A . F 5 HOH 59 62 62 HOH HOH A . F 5 HOH 60 64 64 HOH HOH A . F 5 HOH 61 65 65 HOH HOH A . F 5 HOH 62 68 68 HOH HOH A . F 5 HOH 63 69 69 HOH HOH A . F 5 HOH 64 70 70 HOH HOH A . F 5 HOH 65 71 71 HOH HOH A . F 5 HOH 66 72 72 HOH HOH A . F 5 HOH 67 73 73 HOH HOH A . F 5 HOH 68 74 74 HOH HOH A . F 5 HOH 69 75 75 HOH HOH A . F 5 HOH 70 76 76 HOH HOH A . F 5 HOH 71 77 77 HOH HOH A . F 5 HOH 72 78 78 HOH HOH A . F 5 HOH 73 79 79 HOH HOH A . F 5 HOH 74 80 80 HOH HOH A . F 5 HOH 75 81 81 HOH HOH A . F 5 HOH 76 83 83 HOH HOH A . F 5 HOH 77 84 84 HOH HOH A . F 5 HOH 78 85 85 HOH HOH A . F 5 HOH 79 86 86 HOH HOH A . F 5 HOH 80 88 88 HOH HOH A . F 5 HOH 81 89 89 HOH HOH A . F 5 HOH 82 90 90 HOH HOH A . F 5 HOH 83 91 91 HOH HOH A . F 5 HOH 84 94 94 HOH HOH A . F 5 HOH 85 95 95 HOH HOH A . F 5 HOH 86 97 97 HOH HOH A . F 5 HOH 87 98 98 HOH HOH A . F 5 HOH 88 99 99 HOH HOH A . F 5 HOH 89 100 100 HOH HOH A . F 5 HOH 90 101 101 HOH HOH A . F 5 HOH 91 102 102 HOH HOH A . F 5 HOH 92 103 103 HOH HOH A . F 5 HOH 93 104 104 HOH HOH A . F 5 HOH 94 106 106 HOH HOH A . F 5 HOH 95 107 107 HOH HOH A . F 5 HOH 96 108 108 HOH HOH A . F 5 HOH 97 109 109 HOH HOH A . F 5 HOH 98 111 111 HOH HOH A . F 5 HOH 99 112 112 HOH HOH A . F 5 HOH 100 113 113 HOH HOH A . F 5 HOH 101 114 114 HOH HOH A . F 5 HOH 102 117 117 HOH HOH A . F 5 HOH 103 118 118 HOH HOH A . F 5 HOH 104 120 120 HOH HOH A . F 5 HOH 105 401 401 HOH HOH A . F 5 HOH 106 402 402 HOH HOH A . F 5 HOH 107 403 403 HOH HOH A . F 5 HOH 108 404 404 HOH HOH A . F 5 HOH 109 405 405 HOH HOH A . F 5 HOH 110 406 406 HOH HOH A . F 5 HOH 111 407 407 HOH HOH A . F 5 HOH 112 408 408 HOH HOH A . F 5 HOH 113 409 409 HOH HOH A . F 5 HOH 114 410 410 HOH HOH A . F 5 HOH 115 413 413 HOH HOH A . F 5 HOH 116 415 415 HOH HOH A . F 5 HOH 117 417 417 HOH HOH A . F 5 HOH 118 418 418 HOH HOH A . F 5 HOH 119 421 421 HOH HOH A . F 5 HOH 120 423 423 HOH HOH A . F 5 HOH 121 425 425 HOH HOH A . F 5 HOH 122 426 426 HOH HOH A . F 5 HOH 123 429 429 HOH HOH A . F 5 HOH 124 437 437 HOH HOH A . F 5 HOH 125 440 440 HOH HOH A . F 5 HOH 126 445 445 HOH HOH A . F 5 HOH 127 447 447 HOH HOH A . F 5 HOH 128 448 448 HOH HOH A . F 5 HOH 129 449 449 HOH HOH A . F 5 HOH 130 450 450 HOH HOH A . F 5 HOH 131 451 451 HOH HOH A . F 5 HOH 132 453 453 HOH HOH A . F 5 HOH 133 454 454 HOH HOH A . F 5 HOH 134 457 457 HOH HOH A . F 5 HOH 135 463 463 HOH HOH A . F 5 HOH 136 465 465 HOH HOH A . F 5 HOH 137 501 501 HOH HOH A . F 5 HOH 138 513 513 HOH HOH A . F 5 HOH 139 516 516 HOH HOH A . F 5 HOH 140 520 520 HOH HOH A . F 5 HOH 141 525 525 HOH HOH A . F 5 HOH 142 529 529 HOH HOH A . F 5 HOH 143 859 1 HOH HOH A . F 5 HOH 144 860 601 HOH HOH A . F 5 HOH 145 861 2 HOH HOH A . F 5 HOH 146 862 4 HOH HOH A . F 5 HOH 147 863 7 HOH HOH A . F 5 HOH 148 866 8 HOH HOH A . F 5 HOH 149 867 10 HOH HOH A . F 5 HOH 150 868 11 HOH HOH A . F 5 HOH 151 869 14 HOH HOH A . F 5 HOH 152 870 15 HOH HOH A . F 5 HOH 153 871 17 HOH HOH A . F 5 HOH 154 872 18 HOH HOH A . F 5 HOH 155 873 19 HOH HOH A . F 5 HOH 156 874 22 HOH HOH A . F 5 HOH 157 875 24 HOH HOH A . F 5 HOH 158 876 25 HOH HOH A . F 5 HOH 159 877 26 HOH HOH A . F 5 HOH 160 878 29 HOH HOH A . F 5 HOH 161 879 32 HOH HOH A . F 5 HOH 162 880 37 HOH HOH A . F 5 HOH 163 881 38 HOH HOH A . F 5 HOH 164 882 39 HOH HOH A . F 5 HOH 165 883 40 HOH HOH A . F 5 HOH 166 884 42 HOH HOH A . F 5 HOH 167 885 43 HOH HOH A . F 5 HOH 168 886 44 HOH HOH A . F 5 HOH 169 887 45 HOH HOH A . F 5 HOH 170 888 46 HOH HOH A . F 5 HOH 171 889 50 HOH HOH A . F 5 HOH 172 890 57 HOH HOH A . F 5 HOH 173 891 60 HOH HOH A . F 5 HOH 174 892 74 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 13 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 NE2 ? A HIS 82 ? A HIS 617 ? 1_555 136.2 ? 2 O ? F HOH . ? A HOH 13 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 NE2 ? A HIS 118 ? A HIS 653 ? 1_555 112.1 ? 3 NE2 ? A HIS 82 ? A HIS 617 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 NE2 ? A HIS 118 ? A HIS 653 ? 1_555 111.0 ? 4 O ? F HOH . ? A HOH 13 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD2 ? A ASP 119 ? A ASP 654 ? 1_555 85.3 ? 5 NE2 ? A HIS 82 ? A HIS 617 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD2 ? A ASP 119 ? A ASP 654 ? 1_555 102.1 ? 6 NE2 ? A HIS 118 ? A HIS 653 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD2 ? A ASP 119 ? A ASP 654 ? 1_555 90.4 ? 7 O ? F HOH . ? A HOH 13 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD1 ? A ASP 230 ? A ASP 764 ? 1_555 99.3 ? 8 NE2 ? A HIS 82 ? A HIS 617 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD1 ? A ASP 230 ? A ASP 764 ? 1_555 72.4 ? 9 NE2 ? A HIS 118 ? A HIS 653 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD1 ? A ASP 230 ? A ASP 764 ? 1_555 90.8 ? 10 OD2 ? A ASP 119 ? A ASP 654 ? 1_555 ZN ? C ZN . ? A ZN 864 ? 1_555 OD1 ? A ASP 230 ? A ASP 764 ? 1_555 174.4 ? 11 O ? F HOH . ? A HOH 13 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 88 ? 1_555 104.9 ? 12 O ? F HOH . ? A HOH 13 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 463 ? 1_555 106.4 ? 13 O ? F HOH . ? A HOH 88 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 463 ? 1_555 84.2 ? 14 O ? F HOH . ? A HOH 13 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 465 ? 1_555 168.6 ? 15 O ? F HOH . ? A HOH 88 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 465 ? 1_555 79.4 ? 16 O ? F HOH . ? A HOH 463 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 O ? F HOH . ? A HOH 465 ? 1_555 84.5 ? 17 O ? F HOH . ? A HOH 13 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 OD1 ? A ASP 119 ? A ASP 654 ? 1_555 85.5 ? 18 O ? F HOH . ? A HOH 88 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 OD1 ? A ASP 119 ? A ASP 654 ? 1_555 163.1 ? 19 O ? F HOH . ? A HOH 463 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 OD1 ? A ASP 119 ? A ASP 654 ? 1_555 80.1 ? 20 O ? F HOH . ? A HOH 465 ? 1_555 MG ? D MG . ? A MG 865 ? 1_555 OD1 ? A ASP 119 ? A ASP 654 ? 1_555 93.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-06-21 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2018-01-24 6 'Structure model' 1 5 2023-07-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity 2 3 'Structure model' entity_name_com 3 3 'Structure model' entity_src_gen 4 3 'Structure model' pdbx_distant_solvent_atoms 5 3 'Structure model' struct 6 3 'Structure model' struct_ref 7 3 'Structure model' struct_ref_seq 8 3 'Structure model' struct_ref_seq_dif 9 4 'Structure model' software 10 5 'Structure model' audit_author 11 6 'Structure model' citation 12 6 'Structure model' database_2 13 6 'Structure model' pdbx_struct_conn_angle 14 6 'Structure model' struct_conn 15 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity.pdbx_description' 2 3 'Structure model' '_entity.pdbx_ec' 3 3 'Structure model' '_entity.pdbx_fragment' 4 3 'Structure model' '_entity.pdbx_mutation' 5 3 'Structure model' '_entity_name_com.name' 6 3 'Structure model' '_struct.pdbx_descriptor' 7 3 'Structure model' '_struct_ref.db_code' 8 3 'Structure model' '_struct_ref.pdbx_align_begin' 9 3 'Structure model' '_struct_ref.pdbx_db_accession' 10 3 'Structure model' '_struct_ref.pdbx_db_isoform' 11 3 'Structure model' '_struct_ref_seq.db_align_beg' 12 3 'Structure model' '_struct_ref_seq.db_align_end' 13 3 'Structure model' '_struct_ref_seq.pdbx_db_accession' 14 3 'Structure model' '_struct_ref_seq.pdbx_seq_align_end_ins_code' 15 3 'Structure model' '_struct_ref_seq.seq_align_end' 16 3 'Structure model' '_struct_ref_seq_dif.details' 17 5 'Structure model' '_audit_author.name' 18 6 'Structure model' '_citation.journal_volume' 19 6 'Structure model' '_citation.page_first' 20 6 'Structure model' '_citation.page_last' 21 6 'Structure model' '_database_2.pdbx_DOI' 22 6 'Structure model' '_database_2.pdbx_database_accession' 23 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 24 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 25 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 26 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 27 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 28 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 29 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 30 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 31 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 32 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 33 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 34 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 35 6 'Structure model' '_pdbx_struct_conn_angle.value' 36 6 'Structure model' '_struct_conn.pdbx_dist_value' 37 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 38 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 39 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 40 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 41 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 42 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 43 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 44 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 45 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 46 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 47 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 48 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 49 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 50 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _symmetry_equiv.id _symmetry_equiv.pos_as_xyz 1 'X, Y, Z' 2 '-X, Y, -Z' 3 'X+1/2, Y+1/2, Z' 4 '-X+1/2, Y+1/2, -Z' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 630 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -80.85 _pdbx_validate_torsion.psi -80.21 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 426 ? 6.05 . 2 1 O ? A HOH 525 ? 8.82 . # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-(6-methoxypyridin-3-yl)-2-[(2-morpholin-4-ylethyl)amino]-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one' PD4 3 'ZINC ION' ZN 4 'MAGNESIUM ION' MG 5 water HOH #