HEADER RNA BINDING PROTEIN 06-MAY-09 3HCW TITLE CRYSTAL STRUCTURE OF PROBABLE MALTOSE OPERON TRANSCRIPTIONAL REPRESSOR TITLE 2 MALR FROM STAPHYLOCOCCUS AREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE OPERON TRANSCRIPTIONAL REPRESSOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL FRAGMENT; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 GENE: MALR, SAV1508; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS RNA-BINDING, TRANSCRIPTIONAL REPRESSOR, PSI-2, NYSGXRC, STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER KEYWDS 3 FOR STRUCTURAL GENOMICS, DNA-BINDING, TRANSCRIPTION, TRANSCRIPTION KEYWDS 4 REGULATION, RNA BINDING, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,C.MORANO,J.FREEMAN,S.CHANG,J.M.SAUDER,S.K.BURLEY, AUTHOR 2 S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS AUTHOR 3 (NYSGXRC) REVDAT 5 21-FEB-24 3HCW 1 REMARK REVDAT 4 10-FEB-21 3HCW 1 AUTHOR JRNL REMARK REVDAT 3 21-NOV-18 3HCW 1 AUTHOR REVDAT 2 13-JUL-11 3HCW 1 VERSN REVDAT 1 19-MAY-09 3HCW 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,C.MORANO,J.FREEMAN,S.CHANG,J.M.SAUDER, JRNL AUTH 2 S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF MALTOSE OPERON TRANSCRIPTIONAL JRNL TITL 2 REPRESSOR FROM STAPHYLOCOCCUS AUREUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0034 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 28207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 921 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1364 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4518 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.41000 REMARK 3 B22 (A**2) : -0.89000 REMARK 3 B33 (A**2) : -0.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.340 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.256 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.831 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4681 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6352 ; 1.272 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 591 ; 5.560 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 224 ;40.450 ;26.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 897 ;17.958 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.879 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 754 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3448 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2235 ; 0.153 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3257 ; 0.296 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 341 ; 0.165 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.118 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.179 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2964 ; 5.163 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4710 ; 6.900 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1893 ; 8.867 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1627 ;11.991 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2150 ; 0.47 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2150 ; 7.19 ; 5.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50393 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -0.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.64000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DIFFRACTION DATA WERE CORRECTED AND TRUNCATED DUE TO REMARK 200 ANISOTROPY REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-HCL, PH 8.5, 25% PEG3350, REMARK 280 200MM AMMONIUM SULFATE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 53 REMARK 465 SER A 54 REMARK 465 LEU A 55 REMARK 465 LYS A 317 REMARK 465 ALA A 318 REMARK 465 GLN A 319 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 MET B 53 REMARK 465 SER B 54 REMARK 465 LEU B 55 REMARK 465 LYS B 317 REMARK 465 ALA B 318 REMARK 465 GLN B 319 REMARK 465 GLY B 341 REMARK 465 HIS B 342 REMARK 465 HIS B 343 REMARK 465 HIS B 344 REMARK 465 HIS B 345 REMARK 465 HIS B 346 REMARK 465 HIS B 347 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 280 N - CA - C ANGL. DEV. = 26.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 223 3.69 -69.16 REMARK 500 ASN A 280 71.06 54.66 REMARK 500 ASN A 280 77.93 57.42 REMARK 500 ARG B 119 71.54 30.15 REMARK 500 ASN B 280 75.77 84.10 REMARK 500 SER B 282 -168.82 -160.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 348 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 349 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11226L RELATED DB: TARGETDB DBREF 3HCW A 56 339 UNP Q99TY5 Q99TY5_STAAM 56 339 DBREF 3HCW B 56 339 UNP Q99TY5 Q99TY5_STAAM 56 339 SEQADV 3HCW MET A 53 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW SER A 54 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW LEU A 55 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW GLU A 340 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW GLY A 341 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 342 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 343 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 344 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 345 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 346 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS A 347 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW MET B 53 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW SER B 54 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW LEU B 55 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW GLU B 340 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW GLY B 341 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 342 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 343 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 344 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 345 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 346 UNP Q99TY5 EXPRESSION TAG SEQADV 3HCW HIS B 347 UNP Q99TY5 EXPRESSION TAG SEQRES 1 A 295 MET SER LEU THR ASN GLN THR TYR LYS ILE GLY LEU VAL SEQRES 2 A 295 LEU LYS GLY SER GLU GLU PRO ILE ARG LEU ASN PRO PHE SEQRES 3 A 295 TYR ILE ASN VAL LEU LEU GLY ILE SER GLU THR CYS ASN SEQRES 4 A 295 GLN HIS GLY TYR GLY THR GLN THR THR VAL SER ASN ASN SEQRES 5 A 295 MET ASN ASP LEU MET ASP GLU VAL TYR LYS MET ILE LYS SEQRES 6 A 295 GLN ARG MET VAL ASP ALA PHE ILE LEU LEU TYR SER LYS SEQRES 7 A 295 GLU ASN ASP PRO ILE LYS GLN MET LEU ILE ASP GLU SER SEQRES 8 A 295 MET PRO PHE ILE VAL ILE GLY LYS PRO THR SER ASP ILE SEQRES 9 A 295 ASP HIS GLN PHE THR HIS ILE ASP ASN ASP ASN ILE LEU SEQRES 10 A 295 ALA SER GLU ASN LEU THR ARG HIS VAL ILE GLU GLN GLY SEQRES 11 A 295 VAL ASP GLU LEU ILE PHE ILE THR GLU LYS GLY ASN PHE SEQRES 12 A 295 GLU VAL SER LYS ASP ARG ILE GLN GLY PHE GLU THR VAL SEQRES 13 A 295 ALA SER GLN PHE ASN LEU ASP TYR GLN ILE ILE GLU THR SEQRES 14 A 295 SER ASN GLU ARG GLU VAL ILE LEU ASN TYR MET GLN ASN SEQRES 15 A 295 LEU HIS THR ARG LEU LYS ASP PRO ASN ILE LYS GLN ALA SEQRES 16 A 295 ILE ILE SER LEU ASP ALA MET LEU HIS LEU ALA ILE LEU SEQRES 17 A 295 SER VAL LEU TYR GLU LEU ASN ILE GLU ILE PRO LYS ASP SEQRES 18 A 295 VAL MET THR ALA THR PHE ASN ASP SER TYR LEU THR GLU SEQRES 19 A 295 ILE ALA SER PRO PRO GLN THR CYS ILE ASP ILE LYS PRO SEQRES 20 A 295 ARG MET LEU GLY GLN GLN ALA GLY SER ALA ILE LEU ASN SEQRES 21 A 295 ILE LEU LYS ASN LYS ALA GLN ASP VAL ILE GLU LEU VAL SEQRES 22 A 295 ILE ILE ASP THR GLU LEU LYS ILE ARG LYS SER THR GLN SEQRES 23 A 295 ARG GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 295 MET SER LEU THR ASN GLN THR TYR LYS ILE GLY LEU VAL SEQRES 2 B 295 LEU LYS GLY SER GLU GLU PRO ILE ARG LEU ASN PRO PHE SEQRES 3 B 295 TYR ILE ASN VAL LEU LEU GLY ILE SER GLU THR CYS ASN SEQRES 4 B 295 GLN HIS GLY TYR GLY THR GLN THR THR VAL SER ASN ASN SEQRES 5 B 295 MET ASN ASP LEU MET ASP GLU VAL TYR LYS MET ILE LYS SEQRES 6 B 295 GLN ARG MET VAL ASP ALA PHE ILE LEU LEU TYR SER LYS SEQRES 7 B 295 GLU ASN ASP PRO ILE LYS GLN MET LEU ILE ASP GLU SER SEQRES 8 B 295 MET PRO PHE ILE VAL ILE GLY LYS PRO THR SER ASP ILE SEQRES 9 B 295 ASP HIS GLN PHE THR HIS ILE ASP ASN ASP ASN ILE LEU SEQRES 10 B 295 ALA SER GLU ASN LEU THR ARG HIS VAL ILE GLU GLN GLY SEQRES 11 B 295 VAL ASP GLU LEU ILE PHE ILE THR GLU LYS GLY ASN PHE SEQRES 12 B 295 GLU VAL SER LYS ASP ARG ILE GLN GLY PHE GLU THR VAL SEQRES 13 B 295 ALA SER GLN PHE ASN LEU ASP TYR GLN ILE ILE GLU THR SEQRES 14 B 295 SER ASN GLU ARG GLU VAL ILE LEU ASN TYR MET GLN ASN SEQRES 15 B 295 LEU HIS THR ARG LEU LYS ASP PRO ASN ILE LYS GLN ALA SEQRES 16 B 295 ILE ILE SER LEU ASP ALA MET LEU HIS LEU ALA ILE LEU SEQRES 17 B 295 SER VAL LEU TYR GLU LEU ASN ILE GLU ILE PRO LYS ASP SEQRES 18 B 295 VAL MET THR ALA THR PHE ASN ASP SER TYR LEU THR GLU SEQRES 19 B 295 ILE ALA SER PRO PRO GLN THR CYS ILE ASP ILE LYS PRO SEQRES 20 B 295 ARG MET LEU GLY GLN GLN ALA GLY SER ALA ILE LEU ASN SEQRES 21 B 295 ILE LEU LYS ASN LYS ALA GLN ASP VAL ILE GLU LEU VAL SEQRES 22 B 295 ILE ILE ASP THR GLU LEU LYS ILE ARG LYS SER THR GLN SEQRES 23 B 295 ARG GLU GLY HIS HIS HIS HIS HIS HIS HET GOL A 1 6 HET GOL A 348 6 HET GOL A 349 6 HET GOL B 1 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *97(H2 O) HELIX 1 1 GLU A 70 LEU A 75 1 6 HELIX 2 2 ASN A 76 GLN A 92 1 17 HELIX 3 3 ASN A 104 GLN A 118 1 15 HELIX 4 4 ASP A 133 GLU A 142 1 10 HELIX 5 5 ASP A 155 PHE A 160 5 6 HELIX 6 6 ASP A 166 GLY A 182 1 17 HELIX 7 7 PHE A 195 PHE A 212 1 18 HELIX 8 8 GLU A 224 LYS A 240 1 17 HELIX 9 9 ASP A 252 LEU A 266 1 15 HELIX 10 10 SER A 282 ILE A 287 1 6 HELIX 11 11 LYS A 298 ASN A 316 1 19 HELIX 12 12 ARG A 334 GLN A 338 5 5 HELIX 13 13 GLU B 70 LEU B 75 1 6 HELIX 14 14 ASN B 76 HIS B 93 1 18 HELIX 15 15 ASN B 104 GLN B 118 1 15 HELIX 16 16 ASP B 133 GLU B 142 1 10 HELIX 17 17 ASP B 155 GLN B 159 5 5 HELIX 18 18 ASP B 166 GLN B 181 1 16 HELIX 19 19 PHE B 195 PHE B 212 1 18 HELIX 20 20 GLU B 224 ASP B 241 1 18 HELIX 21 21 ASP B 252 LEU B 266 1 15 HELIX 22 22 SER B 282 ILE B 287 1 6 HELIX 23 23 LYS B 298 ASN B 316 1 19 HELIX 24 24 ARG B 334 GLN B 338 5 5 SHEET 1 A 6 GLY A 96 THR A 99 0 SHEET 2 A 6 LYS A 61 VAL A 65 1 N ILE A 62 O GLN A 98 SHEET 3 A 6 ALA A 123 LEU A 126 1 O ALA A 123 N GLY A 63 SHEET 4 A 6 PHE A 146 ILE A 149 1 O ILE A 149 N LEU A 126 SHEET 5 A 6 HIS A 162 ASN A 165 1 O ILE A 163 N VAL A 148 SHEET 6 A 6 LEU A 324 ILE A 327 1 O VAL A 325 N HIS A 162 SHEET 1 B 6 ASP A 215 THR A 221 0 SHEET 2 B 6 GLU A 185 GLU A 191 1 N THR A 190 O ILE A 219 SHEET 3 B 6 GLN A 246 SER A 250 1 O ILE A 249 N ILE A 189 SHEET 4 B 6 VAL A 274 PHE A 279 1 O MET A 275 N ILE A 248 SHEET 5 B 6 THR A 293 ASP A 296 1 O THR A 293 N THR A 278 SHEET 6 B 6 GLU A 330 LYS A 332 -1 O GLU A 330 N ASP A 296 SHEET 1 C 6 GLY B 96 THR B 99 0 SHEET 2 C 6 LYS B 61 VAL B 65 1 N LEU B 64 O GLN B 98 SHEET 3 C 6 ALA B 123 LEU B 126 1 O ALA B 123 N GLY B 63 SHEET 4 C 6 PHE B 146 ILE B 149 1 O ILE B 149 N LEU B 126 SHEET 5 C 6 HIS B 162 ASN B 165 1 O ILE B 163 N VAL B 148 SHEET 6 C 6 LEU B 324 ILE B 327 1 O VAL B 325 N ASP B 164 SHEET 1 D 6 ASP B 215 THR B 221 0 SHEET 2 D 6 GLU B 185 GLU B 191 1 N THR B 190 O ILE B 219 SHEET 3 D 6 GLN B 246 SER B 250 1 O ILE B 249 N ILE B 187 SHEET 4 D 6 VAL B 274 PHE B 279 1 O MET B 275 N ILE B 248 SHEET 5 D 6 THR B 293 ASP B 296 1 O ILE B 295 N THR B 278 SHEET 6 D 6 GLU B 330 LYS B 332 -1 O GLU B 330 N ASP B 296 CISPEP 1 ILE A 270 PRO A 271 0 -1.44 CISPEP 2 SER A 289 PRO A 290 0 -6.46 CISPEP 3 ILE B 270 PRO B 271 0 1.41 CISPEP 4 SER B 289 PRO B 290 0 -1.20 SITE 1 AC1 6 ILE A 149 GLY A 150 ASP A 164 ASN A 165 SITE 2 AC1 6 ASN A 167 ARG A 201 SITE 1 AC2 3 ARG A 201 ASP A 252 ASN A 280 SITE 1 AC3 5 ASN A 173 ASP A 328 THR A 329 HOH A 353 SITE 2 AC3 5 HOH A 354 SITE 1 AC4 6 GLY B 150 ASP B 164 ASN B 165 ASN B 167 SITE 2 AC4 6 ARG B 201 HOH B 359 CRYST1 46.770 113.340 117.490 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021381 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008823 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008511 0.00000