data_3I91 # _entry.id 3I91 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3I91 RCSB RCSB054116 WWPDB D_1000054116 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3I8Y 'Crystal structure of human chromobox homolog 2 (CBX2)in complex with H3K27(me)3 peptide' unspecified PDB 3I8Z 'Crystal structure of human chromobox homolog 4 (CBX4)' unspecified PDB 3I90 'Crystal structure of human chromobox homolog 6 (CBX6) with H3K27 peptide' unspecified # _pdbx_database_status.entry_id 3I91 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Amaya, M.F.' 1 'Ravichandran, M.' 2 'Loppnau, P.' 3 'Kozieradzki, I.' 4 'Edwards, A.M.' 5 'Arrowsmith, C.H.' 6 'Weigelt, J.' 7 'Bountra, C.' 8 'Bochkarev, A.' 9 'Min, J.' 10 'Ouyang, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Recognition and specificity determinants of the human cbx chromodomains.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 521 _citation.page_last 529 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21047797 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.191411 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kaustov, L.' 1 primary 'Ouyang, H.' 2 primary 'Amaya, M.' 3 primary 'Lemak, A.' 4 primary 'Nady, N.' 5 primary 'Duan, S.' 6 primary 'Wasney, G.A.' 7 primary 'Li, Z.' 8 primary 'Vedadi, M.' 9 primary 'Schapira, M.' 10 primary 'Min, J.' 11 primary 'Arrowsmith, C.H.' 12 # _cell.length_a 39.307 _cell.length_b 51.545 _cell.length_c 77.320 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3I91 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3I91 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chromobox protein homolog 8' 6610.602 2 ? ? 'Chromo domain: UNP residues 8-61' ? 2 polymer syn 'H3K9 peptide' 892.013 1 ? ? ? ? 3 water nat water 18.015 215 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Polycomb 3 homolog, Pc3, hPc3, Rectachrome 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEERE ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEERE A,B ? 2 'polypeptide(L)' no yes 'QTAR(M3L)STG' QTARKSTG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ARG n 1 3 VAL n 1 4 PHE n 1 5 ALA n 1 6 ALA n 1 7 GLU n 1 8 ALA n 1 9 LEU n 1 10 LEU n 1 11 LYS n 1 12 ARG n 1 13 ARG n 1 14 ILE n 1 15 ARG n 1 16 LYS n 1 17 GLY n 1 18 ARG n 1 19 MET n 1 20 GLU n 1 21 TYR n 1 22 LEU n 1 23 VAL n 1 24 LYS n 1 25 TRP n 1 26 LYS n 1 27 GLY n 1 28 TRP n 1 29 SER n 1 30 GLN n 1 31 LYS n 1 32 TYR n 1 33 SER n 1 34 THR n 1 35 TRP n 1 36 GLU n 1 37 PRO n 1 38 GLU n 1 39 GLU n 1 40 ASN n 1 41 ILE n 1 42 LEU n 1 43 ASP n 1 44 ALA n 1 45 ARG n 1 46 LEU n 1 47 LEU n 1 48 ALA n 1 49 ALA n 1 50 PHE n 1 51 GLU n 1 52 GLU n 1 53 ARG n 1 54 GLU n 2 1 GLN n 2 2 THR n 2 3 ALA n 2 4 ARG n 2 5 M3L n 2 6 SER n 2 7 THR n 2 8 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CBX8, PC3, RC1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic peptide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CBX8_HUMAN Q9HC52 1 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEERE 8 ? 2 PDB 3I91 3I91 2 QTARKSTG 5 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3I91 A 1 ? 54 ? Q9HC52 8 ? 61 ? 8 61 2 1 3I91 B 1 ? 54 ? Q9HC52 8 ? 61 ? 8 61 3 2 3I91 C 1 ? 8 ? 3I91 5 ? 12 ? 5 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3I91 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'pH 7.0, VAPOR DIFFUSION, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'Cryo-cooled first crystal and sagitally focusing second crystal' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 # _reflns.entry_id 3I91 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 23019 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3I91 _refine.ls_d_res_high 1.55 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.030 _refine.ls_number_reflns_obs 23019 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details '1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. U VALUES: REFINED INDIVIDUALLY.' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_R_work 0.213 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.249 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1180 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.565 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.220 _refine.aniso_B[2][2] -0.750 _refine.aniso_B[3][3] -0.470 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.088 _refine.pdbx_overall_ESU_R_Free 0.091 _refine.overall_SU_ML 0.053 _refine.overall_SU_B 1.415 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 67.95 _refine.B_iso_min 6.53 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 946 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 215 _refine_hist.number_atoms_total 1161 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 965 0.029 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1293 2.536 1.953 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 109 6.510 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 49 25.388 21.429 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 181 14.659 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 16.961 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 131 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 718 0.015 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 553 1.706 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 873 2.690 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 412 3.800 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 420 5.756 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.59 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 86.270 _refine_ls_shell.number_reflns_R_work 1359 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.329 _refine_ls_shell.R_factor_R_free 0.337 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1433 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3I91 _struct.title 'Crystal structure of human chromobox homolog 8 (CBX8) with H3K9 peptide' _struct.pdbx_descriptor 'Chromobox protein homolog 8, H3K9 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3I91 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Chromobox homolog 8, CBX8, H3K9 peptide, Structural Genomics, Structural Genomics Consortium, SGC, Chromatin regulator, Nucleus, Phosphoprotein, Repressor, Transcription, Transcription regulation ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 29 ? SER A 33 ? SER A 36 SER A 40 5 ? 5 HELX_P HELX_P2 2 GLU A 39 ? ILE A 41 ? GLU A 46 ILE A 48 5 ? 3 HELX_P HELX_P3 3 ASP A 43 ? ARG A 53 ? ASP A 50 ARG A 60 1 ? 11 HELX_P HELX_P4 4 SER B 29 ? SER B 33 ? SER B 36 SER B 40 5 ? 5 HELX_P HELX_P5 5 GLU B 39 ? ILE B 41 ? GLU B 46 ILE B 48 5 ? 3 HELX_P HELX_P6 6 ASP B 43 ? ARG B 53 ? ASP B 50 ARG B 60 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? C ARG 4 C ? ? ? 1_555 C M3L 5 N ? ? C ARG 8 C M3L 9 1_555 ? ? ? ? ? ? ? 1.367 ? covale2 covale ? ? C M3L 5 C ? ? ? 1_555 C SER 6 N ? ? C M3L 9 C SER 10 1_555 ? ? ? ? ? ? ? 1.301 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 13 ? ARG A 15 ? ARG A 20 ARG A 22 A 2 ARG A 18 ? TRP A 25 ? ARG A 25 TRP A 32 A 3 THR A 34 ? PRO A 37 ? THR A 41 PRO A 44 B 1 ARG A 13 ? ARG A 15 ? ARG A 20 ARG A 22 B 2 ARG A 18 ? TRP A 25 ? ARG A 25 TRP A 32 B 3 VAL A 3 ? LEU A 9 ? VAL A 10 LEU A 16 B 4 THR C 2 ? ARG C 4 ? THR C 6 ARG C 8 C 1 ALA B 6 ? ARG B 15 ? ALA B 13 ARG B 22 C 2 ARG B 18 ? TRP B 25 ? ARG B 25 TRP B 32 C 3 THR B 34 ? PRO B 37 ? THR B 41 PRO B 44 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 15 ? N ARG A 22 O ARG A 18 ? O ARG A 25 A 2 3 N VAL A 23 ? N VAL A 30 O THR A 34 ? O THR A 41 B 1 2 N ARG A 15 ? N ARG A 22 O ARG A 18 ? O ARG A 25 B 2 3 O LYS A 24 ? O LYS A 31 N ALA A 8 ? N ALA A 15 B 3 4 N PHE A 4 ? N PHE A 11 O ALA C 3 ? O ALA C 7 C 1 2 N LEU B 10 ? N LEU B 17 O LEU B 22 ? O LEU B 29 C 2 3 N VAL B 23 ? N VAL B 30 O THR B 34 ? O THR B 41 # _atom_sites.entry_id 3I91 _atom_sites.fract_transf_matrix[1][1] 0.025441 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019401 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012933 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 8 ? ? ? A . n A 1 2 ARG 2 9 9 ARG ARG A . n A 1 3 VAL 3 10 10 VAL VAL A . n A 1 4 PHE 4 11 11 PHE PHE A . n A 1 5 ALA 5 12 12 ALA ALA A . n A 1 6 ALA 6 13 13 ALA ALA A . n A 1 7 GLU 7 14 14 GLU GLU A . n A 1 8 ALA 8 15 15 ALA ALA A . n A 1 9 LEU 9 16 16 LEU LEU A . n A 1 10 LEU 10 17 17 LEU LEU A . n A 1 11 LYS 11 18 18 LYS LYS A . n A 1 12 ARG 12 19 19 ARG ARG A . n A 1 13 ARG 13 20 20 ARG ARG A . n A 1 14 ILE 14 21 21 ILE ILE A . n A 1 15 ARG 15 22 22 ARG ARG A . n A 1 16 LYS 16 23 23 LYS LYS A . n A 1 17 GLY 17 24 24 GLY GLY A . n A 1 18 ARG 18 25 25 ARG ARG A . n A 1 19 MET 19 26 26 MET MET A . n A 1 20 GLU 20 27 27 GLU GLU A . n A 1 21 TYR 21 28 28 TYR TYR A . n A 1 22 LEU 22 29 29 LEU LEU A . n A 1 23 VAL 23 30 30 VAL VAL A . n A 1 24 LYS 24 31 31 LYS LYS A . n A 1 25 TRP 25 32 32 TRP TRP A . n A 1 26 LYS 26 33 33 LYS LYS A . n A 1 27 GLY 27 34 34 GLY GLY A . n A 1 28 TRP 28 35 35 TRP TRP A . n A 1 29 SER 29 36 36 SER SER A . n A 1 30 GLN 30 37 37 GLN GLN A . n A 1 31 LYS 31 38 38 LYS LYS A . n A 1 32 TYR 32 39 39 TYR TYR A . n A 1 33 SER 33 40 40 SER SER A . n A 1 34 THR 34 41 41 THR THR A . n A 1 35 TRP 35 42 42 TRP TRP A . n A 1 36 GLU 36 43 43 GLU GLU A . n A 1 37 PRO 37 44 44 PRO PRO A . n A 1 38 GLU 38 45 45 GLU GLU A . n A 1 39 GLU 39 46 46 GLU GLU A . n A 1 40 ASN 40 47 47 ASN ASN A . n A 1 41 ILE 41 48 48 ILE ILE A . n A 1 42 LEU 42 49 49 LEU LEU A . n A 1 43 ASP 43 50 50 ASP ASP A . n A 1 44 ALA 44 51 51 ALA ALA A . n A 1 45 ARG 45 52 52 ARG ARG A . n A 1 46 LEU 46 53 53 LEU LEU A . n A 1 47 LEU 47 54 54 LEU LEU A . n A 1 48 ALA 48 55 55 ALA ALA A . n A 1 49 ALA 49 56 56 ALA ALA A . n A 1 50 PHE 50 57 57 PHE PHE A . n A 1 51 GLU 51 58 58 GLU GLU A . n A 1 52 GLU 52 59 59 GLU GLU A . n A 1 53 ARG 53 60 60 ARG ARG A . n A 1 54 GLU 54 61 ? ? ? A . n B 1 1 GLU 1 8 ? ? ? B . n B 1 2 ARG 2 9 9 ARG ARG B . n B 1 3 VAL 3 10 10 VAL VAL B . n B 1 4 PHE 4 11 11 PHE PHE B . n B 1 5 ALA 5 12 12 ALA ALA B . n B 1 6 ALA 6 13 13 ALA ALA B . n B 1 7 GLU 7 14 14 GLU GLU B . n B 1 8 ALA 8 15 15 ALA ALA B . n B 1 9 LEU 9 16 16 LEU LEU B . n B 1 10 LEU 10 17 17 LEU LEU B . n B 1 11 LYS 11 18 18 LYS LYS B . n B 1 12 ARG 12 19 19 ARG ARG B . n B 1 13 ARG 13 20 20 ARG ARG B . n B 1 14 ILE 14 21 21 ILE ILE B . n B 1 15 ARG 15 22 22 ARG ARG B . n B 1 16 LYS 16 23 23 LYS LYS B . n B 1 17 GLY 17 24 24 GLY GLY B . n B 1 18 ARG 18 25 25 ARG ARG B . n B 1 19 MET 19 26 26 MET MET B . n B 1 20 GLU 20 27 27 GLU GLU B . n B 1 21 TYR 21 28 28 TYR TYR B . n B 1 22 LEU 22 29 29 LEU LEU B . n B 1 23 VAL 23 30 30 VAL VAL B . n B 1 24 LYS 24 31 31 LYS LYS B . n B 1 25 TRP 25 32 32 TRP TRP B . n B 1 26 LYS 26 33 33 LYS LYS B . n B 1 27 GLY 27 34 34 GLY GLY B . n B 1 28 TRP 28 35 35 TRP TRP B . n B 1 29 SER 29 36 36 SER SER B . n B 1 30 GLN 30 37 37 GLN GLN B . n B 1 31 LYS 31 38 38 LYS LYS B . n B 1 32 TYR 32 39 39 TYR TYR B . n B 1 33 SER 33 40 40 SER SER B . n B 1 34 THR 34 41 41 THR THR B . n B 1 35 TRP 35 42 42 TRP TRP B . n B 1 36 GLU 36 43 43 GLU GLU B . n B 1 37 PRO 37 44 44 PRO PRO B . n B 1 38 GLU 38 45 45 GLU GLU B . n B 1 39 GLU 39 46 46 GLU GLU B . n B 1 40 ASN 40 47 47 ASN ASN B . n B 1 41 ILE 41 48 48 ILE ILE B . n B 1 42 LEU 42 49 49 LEU LEU B . n B 1 43 ASP 43 50 50 ASP ASP B . n B 1 44 ALA 44 51 51 ALA ALA B . n B 1 45 ARG 45 52 52 ARG ARG B . n B 1 46 LEU 46 53 53 LEU LEU B . n B 1 47 LEU 47 54 54 LEU LEU B . n B 1 48 ALA 48 55 55 ALA ALA B . n B 1 49 ALA 49 56 56 ALA ALA B . n B 1 50 PHE 50 57 57 PHE PHE B . n B 1 51 GLU 51 58 58 GLU GLU B . n B 1 52 GLU 52 59 59 GLU GLU B . n B 1 53 ARG 53 60 60 ARG GLY B . n B 1 54 GLU 54 61 ? ? ? B . n C 2 1 GLN 1 5 5 GLN GLN C . n C 2 2 THR 2 6 6 THR THR C . n C 2 3 ALA 3 7 7 ALA ALA C . n C 2 4 ARG 4 8 8 ARG ARG C . n C 2 5 M3L 5 9 9 M3L M3L C . n C 2 6 SER 6 10 10 SER SER C . n C 2 7 THR 7 11 11 THR THR C . n C 2 8 GLY 8 12 12 GLY GLY C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 2 2 HOH HOH A . D 3 HOH 2 4 4 HOH HOH A . D 3 HOH 3 62 62 HOH HOH A . D 3 HOH 4 63 11 HOH HOH A . D 3 HOH 5 64 14 HOH HOH A . D 3 HOH 6 65 15 HOH HOH A . D 3 HOH 7 66 17 HOH HOH A . D 3 HOH 8 67 67 HOH HOH A . D 3 HOH 9 68 18 HOH HOH A . D 3 HOH 10 69 19 HOH HOH A . D 3 HOH 11 70 70 HOH HOH A . D 3 HOH 12 71 71 HOH HOH A . D 3 HOH 13 72 20 HOH HOH A . D 3 HOH 14 73 73 HOH HOH A . D 3 HOH 15 74 74 HOH HOH A . D 3 HOH 16 75 24 HOH HOH A . D 3 HOH 17 76 28 HOH HOH A . D 3 HOH 18 77 29 HOH HOH A . D 3 HOH 19 78 31 HOH HOH A . D 3 HOH 20 79 32 HOH HOH A . D 3 HOH 21 80 34 HOH HOH A . D 3 HOH 22 81 38 HOH HOH A . D 3 HOH 23 82 39 HOH HOH A . D 3 HOH 24 83 83 HOH HOH A . D 3 HOH 25 84 40 HOH HOH A . D 3 HOH 26 85 85 HOH HOH A . D 3 HOH 27 86 43 HOH HOH A . D 3 HOH 28 87 45 HOH HOH A . D 3 HOH 29 88 46 HOH HOH A . D 3 HOH 30 89 47 HOH HOH A . D 3 HOH 31 90 49 HOH HOH A . D 3 HOH 32 91 91 HOH HOH A . D 3 HOH 33 92 92 HOH HOH A . D 3 HOH 34 93 54 HOH HOH A . D 3 HOH 35 94 94 HOH HOH A . D 3 HOH 36 95 95 HOH HOH A . D 3 HOH 37 96 55 HOH HOH A . D 3 HOH 38 97 56 HOH HOH A . D 3 HOH 39 98 57 HOH HOH A . D 3 HOH 40 99 35 HOH HOH A . D 3 HOH 41 100 27 HOH HOH A . D 3 HOH 42 101 101 HOH HOH A . D 3 HOH 43 104 104 HOH HOH A . D 3 HOH 44 106 106 HOH HOH A . D 3 HOH 45 114 114 HOH HOH A . D 3 HOH 46 123 123 HOH HOH A . D 3 HOH 47 126 126 HOH HOH A . D 3 HOH 48 127 127 HOH HOH A . D 3 HOH 49 128 128 HOH HOH A . D 3 HOH 50 132 132 HOH HOH A . D 3 HOH 51 161 161 HOH HOH A . D 3 HOH 52 177 177 HOH HOH A . D 3 HOH 53 179 179 HOH HOH A . D 3 HOH 54 181 181 HOH HOH A . D 3 HOH 55 184 184 HOH HOH A . D 3 HOH 56 195 195 HOH HOH A . D 3 HOH 57 220 220 HOH HOH A . D 3 HOH 58 222 222 HOH HOH A . D 3 HOH 59 226 226 HOH HOH A . D 3 HOH 60 230 230 HOH HOH A . D 3 HOH 61 231 231 HOH HOH A . D 3 HOH 62 234 234 HOH HOH A . D 3 HOH 63 235 235 HOH HOH A . D 3 HOH 64 236 236 HOH HOH A . D 3 HOH 65 237 237 HOH HOH A . D 3 HOH 66 241 241 HOH HOH A . D 3 HOH 67 242 242 HOH HOH A . D 3 HOH 68 245 245 HOH HOH A . D 3 HOH 69 254 254 HOH HOH A . D 3 HOH 70 256 256 HOH HOH A . D 3 HOH 71 257 257 HOH HOH A . D 3 HOH 72 260 260 HOH HOH A . D 3 HOH 73 265 265 HOH HOH A . D 3 HOH 74 272 272 HOH HOH A . D 3 HOH 75 273 273 HOH HOH A . D 3 HOH 76 275 275 HOH HOH A . D 3 HOH 77 279 279 HOH HOH A . D 3 HOH 78 280 280 HOH HOH A . D 3 HOH 79 281 281 HOH HOH A . D 3 HOH 80 285 285 HOH HOH A . D 3 HOH 81 287 287 HOH HOH A . D 3 HOH 82 288 288 HOH HOH A . D 3 HOH 83 290 290 HOH HOH A . D 3 HOH 84 293 293 HOH HOH A . D 3 HOH 85 296 296 HOH HOH A . D 3 HOH 86 298 298 HOH HOH A . D 3 HOH 87 300 300 HOH HOH A . D 3 HOH 88 307 307 HOH HOH A . D 3 HOH 89 308 308 HOH HOH A . D 3 HOH 90 310 310 HOH HOH A . D 3 HOH 91 311 311 HOH HOH A . D 3 HOH 92 312 312 HOH HOH A . D 3 HOH 93 321 321 HOH HOH A . D 3 HOH 94 323 323 HOH HOH A . D 3 HOH 95 324 324 HOH HOH A . D 3 HOH 96 326 326 HOH HOH A . E 3 HOH 1 1 1 HOH HOH B . E 3 HOH 2 3 3 HOH HOH B . E 3 HOH 3 5 5 HOH HOH B . E 3 HOH 4 6 6 HOH HOH B . E 3 HOH 5 7 7 HOH HOH B . E 3 HOH 6 62 9 HOH HOH B . E 3 HOH 7 63 63 HOH HOH B . E 3 HOH 8 64 64 HOH HOH B . E 3 HOH 9 65 65 HOH HOH B . E 3 HOH 10 66 10 HOH HOH B . E 3 HOH 11 67 12 HOH HOH B . E 3 HOH 12 68 68 HOH HOH B . E 3 HOH 13 69 13 HOH HOH B . E 3 HOH 14 70 16 HOH HOH B . E 3 HOH 15 71 21 HOH HOH B . E 3 HOH 16 72 72 HOH HOH B . E 3 HOH 17 73 22 HOH HOH B . E 3 HOH 18 74 25 HOH HOH B . E 3 HOH 19 75 75 HOH HOH B . E 3 HOH 20 76 76 HOH HOH B . E 3 HOH 21 77 77 HOH HOH B . E 3 HOH 22 78 78 HOH HOH B . E 3 HOH 23 79 79 HOH HOH B . E 3 HOH 24 80 26 HOH HOH B . E 3 HOH 25 81 81 HOH HOH B . E 3 HOH 26 82 82 HOH HOH B . E 3 HOH 27 83 30 HOH HOH B . E 3 HOH 28 84 84 HOH HOH B . E 3 HOH 29 86 86 HOH HOH B . E 3 HOH 30 87 87 HOH HOH B . E 3 HOH 31 88 88 HOH HOH B . E 3 HOH 32 89 89 HOH HOH B . E 3 HOH 33 90 36 HOH HOH B . E 3 HOH 34 91 41 HOH HOH B . E 3 HOH 35 92 44 HOH HOH B . E 3 HOH 36 93 93 HOH HOH B . E 3 HOH 37 94 48 HOH HOH B . E 3 HOH 38 95 51 HOH HOH B . E 3 HOH 39 96 53 HOH HOH B . E 3 HOH 40 97 97 HOH HOH B . E 3 HOH 41 98 98 HOH HOH B . E 3 HOH 42 99 99 HOH HOH B . E 3 HOH 43 100 100 HOH HOH B . E 3 HOH 44 101 58 HOH HOH B . E 3 HOH 45 102 102 HOH HOH B . E 3 HOH 46 103 59 HOH HOH B . E 3 HOH 47 135 135 HOH HOH B . E 3 HOH 48 166 166 HOH HOH B . E 3 HOH 49 174 174 HOH HOH B . E 3 HOH 50 176 176 HOH HOH B . E 3 HOH 51 178 178 HOH HOH B . E 3 HOH 52 221 221 HOH HOH B . E 3 HOH 53 223 223 HOH HOH B . E 3 HOH 54 224 224 HOH HOH B . E 3 HOH 55 225 225 HOH HOH B . E 3 HOH 56 229 229 HOH HOH B . E 3 HOH 57 232 232 HOH HOH B . E 3 HOH 58 233 233 HOH HOH B . E 3 HOH 59 238 238 HOH HOH B . E 3 HOH 60 239 239 HOH HOH B . E 3 HOH 61 240 240 HOH HOH B . E 3 HOH 62 243 243 HOH HOH B . E 3 HOH 63 244 244 HOH HOH B . E 3 HOH 64 246 246 HOH HOH B . E 3 HOH 65 247 247 HOH HOH B . E 3 HOH 66 248 248 HOH HOH B . E 3 HOH 67 249 249 HOH HOH B . E 3 HOH 68 250 250 HOH HOH B . E 3 HOH 69 251 251 HOH HOH B . E 3 HOH 70 252 252 HOH HOH B . E 3 HOH 71 255 255 HOH HOH B . E 3 HOH 72 258 258 HOH HOH B . E 3 HOH 73 261 261 HOH HOH B . E 3 HOH 74 262 262 HOH HOH B . E 3 HOH 75 263 263 HOH HOH B . E 3 HOH 76 264 264 HOH HOH B . E 3 HOH 77 266 266 HOH HOH B . E 3 HOH 78 267 267 HOH HOH B . E 3 HOH 79 270 270 HOH HOH B . E 3 HOH 80 271 271 HOH HOH B . E 3 HOH 81 274 274 HOH HOH B . E 3 HOH 82 276 276 HOH HOH B . E 3 HOH 83 277 277 HOH HOH B . E 3 HOH 84 282 282 HOH HOH B . E 3 HOH 85 283 283 HOH HOH B . E 3 HOH 86 284 284 HOH HOH B . E 3 HOH 87 286 286 HOH HOH B . E 3 HOH 88 289 289 HOH HOH B . E 3 HOH 89 291 291 HOH HOH B . E 3 HOH 90 292 292 HOH HOH B . E 3 HOH 91 294 294 HOH HOH B . E 3 HOH 92 295 295 HOH HOH B . E 3 HOH 93 299 299 HOH HOH B . E 3 HOH 94 301 301 HOH HOH B . E 3 HOH 95 302 302 HOH HOH B . E 3 HOH 96 303 303 HOH HOH B . E 3 HOH 97 304 304 HOH HOH B . E 3 HOH 98 305 305 HOH HOH B . E 3 HOH 99 306 306 HOH HOH B . E 3 HOH 100 309 309 HOH HOH B . E 3 HOH 101 313 313 HOH HOH B . E 3 HOH 102 314 314 HOH HOH B . E 3 HOH 103 315 315 HOH HOH B . E 3 HOH 104 316 316 HOH HOH B . E 3 HOH 105 317 317 HOH HOH B . E 3 HOH 106 318 318 HOH HOH B . E 3 HOH 107 319 319 HOH HOH B . E 3 HOH 108 322 322 HOH HOH B . F 3 HOH 1 52 52 HOH HOH C . F 3 HOH 2 227 227 HOH HOH C . F 3 HOH 3 228 228 HOH HOH C . F 3 HOH 4 253 253 HOH HOH C . F 3 HOH 5 259 259 HOH HOH C . F 3 HOH 6 268 268 HOH HOH C . F 3 HOH 7 269 269 HOH HOH C . F 3 HOH 8 278 278 HOH HOH C . F 3 HOH 9 297 297 HOH HOH C . F 3 HOH 10 320 320 HOH HOH C . F 3 HOH 11 325 325 HOH HOH C . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 9 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-TRIMETHYLLYSINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,F 2 1 B,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1310 ? 1 MORE -6.4 ? 1 'SSA (A^2)' 4120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N C GLN 5 ? ? O C HOH 253 ? ? 1.93 2 1 O B LYS 23 ? ? O B HOH 274 ? ? 1.94 3 1 O B HOH 98 ? ? O B HOH 264 ? ? 2.11 4 1 O B HOH 255 ? ? O B HOH 277 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE2 B GLU 45 ? ? 1_555 O A HOH 254 ? ? 2_664 1.77 2 1 CE2 A TYR 39 ? ? 1_555 O A HOH 260 ? ? 3_755 2.12 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ B TYR 28 ? ? CE2 B TYR 28 ? ? 1.300 1.381 -0.081 0.013 N 2 1 CE2 B TYR 39 ? ? CD2 B TYR 39 ? ? 1.484 1.389 0.095 0.015 N 3 1 CD B GLU 43 ? ? OE2 B GLU 43 ? ? 1.322 1.252 0.070 0.011 N 4 1 CB B GLU 45 ? ? CG B GLU 45 ? ? 1.383 1.517 -0.134 0.019 N 5 1 CD B GLU 45 ? ? OE2 B GLU 45 ? ? 1.180 1.252 -0.072 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 19 ? ? CZ A ARG 19 ? ? NH1 A ARG 19 ? ? 126.79 120.30 6.49 0.50 N 2 1 NE A ARG 19 ? ? CZ A ARG 19 ? ? NH2 A ARG 19 ? ? 114.44 120.30 -5.86 0.50 N 3 1 NE A ARG 20 ? ? CZ A ARG 20 ? ? NH1 A ARG 20 ? ? 116.25 120.30 -4.05 0.50 N 4 1 CD A LYS 31 ? ? CE A LYS 31 ? ? NZ A LYS 31 ? ? 94.49 111.70 -17.21 2.30 N 5 1 NE A ARG 60 ? ? CZ A ARG 60 ? ? NH1 A ARG 60 ? ? 123.45 120.30 3.15 0.50 N 6 1 NE A ARG 60 ? ? CZ A ARG 60 ? ? NH2 A ARG 60 ? ? 117.15 120.30 -3.15 0.50 N 7 1 CB B PHE 11 ? ? CG B PHE 11 ? ? CD2 B PHE 11 ? ? 125.13 120.80 4.33 0.70 N 8 1 CB B TYR 28 ? ? CG B TYR 28 ? ? CD2 B TYR 28 ? ? 116.72 121.00 -4.28 0.60 N 9 1 CB B ASP 50 ? ? CG B ASP 50 ? ? OD1 B ASP 50 ? ? 123.73 118.30 5.43 0.90 N 10 1 NE B ARG 52 ? ? CZ B ARG 52 ? ? NH1 B ARG 52 ? ? 125.54 120.30 5.24 0.50 N 11 1 NE B ARG 52 ? ? CZ B ARG 52 ? ? NH2 B ARG 52 ? ? 114.77 120.30 -5.53 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 49 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -116.11 _pdbx_validate_torsion.psi 56.03 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 23 ? CG ? A LYS 16 CG 2 1 Y 1 A LYS 23 ? CD ? A LYS 16 CD 3 1 Y 1 A LYS 23 ? CE ? A LYS 16 CE 4 1 Y 1 A LYS 23 ? NZ ? A LYS 16 NZ 5 1 Y 1 B ARG 60 ? CB ? B ARG 53 CB 6 1 Y 1 B ARG 60 ? CG ? B ARG 53 CG 7 1 Y 1 B ARG 60 ? CD ? B ARG 53 CD 8 1 Y 1 B ARG 60 ? NE ? B ARG 53 NE 9 1 Y 1 B ARG 60 ? CZ ? B ARG 53 CZ 10 1 Y 1 B ARG 60 ? NH1 ? B ARG 53 NH1 11 1 Y 1 B ARG 60 ? NH2 ? B ARG 53 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 8 ? A GLU 1 2 1 Y 1 A GLU 61 ? A GLU 54 3 1 Y 1 B GLU 8 ? B GLU 1 4 1 Y 1 B GLU 61 ? B GLU 54 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #