data_3IGN # _entry.id 3IGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3IGN RCSB RCSB054386 WWPDB D_1000054386 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id MqR89a _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3IGN _pdbx_database_status.recvd_initial_deposition_date 2009-07-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vorobiev, S.' 1 'Neely, H.' 2 'Seetharaman, J.' 3 'Wang, H.' 4 'Foote, E.L.' 5 'Ciccosanti, C.' 6 'Sahdev, S.' 7 'Xiao, R.' 8 'Acton, T.B.' 9 'Montelione, G.T.' 10 'Tong, L.' 11 'Hunt, J.F.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title ;Crystal structure of a catalytically active GG(D/E)EF diguanylate cyclase domain from Marinobacter aquaeolei with bound c-di-GMP product. ; _citation.journal_abbrev J.Struct.Funct.Genom. _citation.journal_volume 13 _citation.page_first 177 _citation.page_last 183 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country NE _citation.journal_id_ISSN 1345-711X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22843345 _citation.pdbx_database_id_DOI 10.1007/s10969-012-9136-4 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vorobiev, S.M.' 1 primary 'Neely, H.' 2 primary 'Yu, B.' 3 primary 'Seetharaman, J.' 4 primary 'Xiao, R.' 5 primary 'Acton, T.B.' 6 primary 'Montelione, G.T.' 7 primary 'Hunt, J.F.' 8 # _cell.entry_id 3IGN _cell.length_a 59.229 _cell.length_b 59.229 _cell.length_c 118.895 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IGN _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Diguanylate cyclase' 20463.838 1 2.7.7.65 ? 'GGDEF domain' ? 2 non-polymer syn ;9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) ; 690.411 2 ? ? ? ? 3 water nat water 18.015 168 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)EQLAKLS(MSE)TDRLTGLLNRGTWENLVDAEYERFRRYGQATSLV(MSE)FDIDHFKPVNDTYGHLAGDEVIRH TADVTRNNIRQSDSAGRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVS(MSE)GIAQLTETPENY (MSE)QW(MSE)QKADEALYKAKESGRNKVVVSLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEQLAKLSMTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQS DSAGRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVSMGIAQLTETPENYMQWMQKADEALYKAKE SGRNKVVVSLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MqR89a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLU n 1 3 GLN n 1 4 LEU n 1 5 ALA n 1 6 LYS n 1 7 LEU n 1 8 SER n 1 9 MSE n 1 10 THR n 1 11 ASP n 1 12 ARG n 1 13 LEU n 1 14 THR n 1 15 GLY n 1 16 LEU n 1 17 LEU n 1 18 ASN n 1 19 ARG n 1 20 GLY n 1 21 THR n 1 22 TRP n 1 23 GLU n 1 24 ASN n 1 25 LEU n 1 26 VAL n 1 27 ASP n 1 28 ALA n 1 29 GLU n 1 30 TYR n 1 31 GLU n 1 32 ARG n 1 33 PHE n 1 34 ARG n 1 35 ARG n 1 36 TYR n 1 37 GLY n 1 38 GLN n 1 39 ALA n 1 40 THR n 1 41 SER n 1 42 LEU n 1 43 VAL n 1 44 MSE n 1 45 PHE n 1 46 ASP n 1 47 ILE n 1 48 ASP n 1 49 HIS n 1 50 PHE n 1 51 LYS n 1 52 PRO n 1 53 VAL n 1 54 ASN n 1 55 ASP n 1 56 THR n 1 57 TYR n 1 58 GLY n 1 59 HIS n 1 60 LEU n 1 61 ALA n 1 62 GLY n 1 63 ASP n 1 64 GLU n 1 65 VAL n 1 66 ILE n 1 67 ARG n 1 68 HIS n 1 69 THR n 1 70 ALA n 1 71 ASP n 1 72 VAL n 1 73 THR n 1 74 ARG n 1 75 ASN n 1 76 ASN n 1 77 ILE n 1 78 ARG n 1 79 GLN n 1 80 SER n 1 81 ASP n 1 82 SER n 1 83 ALA n 1 84 GLY n 1 85 ARG n 1 86 TYR n 1 87 GLY n 1 88 GLY n 1 89 GLU n 1 90 GLU n 1 91 PHE n 1 92 GLY n 1 93 ILE n 1 94 ILE n 1 95 LEU n 1 96 PRO n 1 97 GLU n 1 98 THR n 1 99 ASP n 1 100 ALA n 1 101 GLU n 1 102 SER n 1 103 ALA n 1 104 ARG n 1 105 VAL n 1 106 ILE n 1 107 CYS n 1 108 GLU n 1 109 ARG n 1 110 ILE n 1 111 ARG n 1 112 GLU n 1 113 ALA n 1 114 ILE n 1 115 GLU n 1 116 LYS n 1 117 SER n 1 118 THR n 1 119 VAL n 1 120 SER n 1 121 THR n 1 122 SER n 1 123 ALA n 1 124 GLY n 1 125 ASP n 1 126 ILE n 1 127 GLN n 1 128 TYR n 1 129 THR n 1 130 VAL n 1 131 SER n 1 132 MSE n 1 133 GLY n 1 134 ILE n 1 135 ALA n 1 136 GLN n 1 137 LEU n 1 138 THR n 1 139 GLU n 1 140 THR n 1 141 PRO n 1 142 GLU n 1 143 ASN n 1 144 TYR n 1 145 MSE n 1 146 GLN n 1 147 TRP n 1 148 MSE n 1 149 GLN n 1 150 LYS n 1 151 ALA n 1 152 ASP n 1 153 GLU n 1 154 ALA n 1 155 LEU n 1 156 TYR n 1 157 LYS n 1 158 ALA n 1 159 LYS n 1 160 GLU n 1 161 SER n 1 162 GLY n 1 163 ARG n 1 164 ASN n 1 165 LYS n 1 166 VAL n 1 167 VAL n 1 168 VAL n 1 169 SER n 1 170 LEU n 1 171 GLU n 1 172 HIS n 1 173 HIS n 1 174 HIS n 1 175 HIS n 1 176 HIS n 1 177 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Maqu_2607 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Marinobacter aquaeolei VT8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 351348 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc '700491/DSM 11845/VT8' _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) +Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'pET 21-23c' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1U3W3_MARAV _struct_ref.pdbx_db_accession A1U3W3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQLAKLSMTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQSD SAGRYGGEEFGIILPETDAESARVICERIREAIEKSTVSTSAGDIQYTVSMGIAQLTETPENYMQWMQKADEALYKAKES GRNKVVVS ; _struct_ref.pdbx_align_begin 149 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3IGN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 169 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A1U3W3 _struct_ref_seq.db_align_beg 149 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 316 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 149 _struct_ref_seq.pdbx_auth_seq_align_end 316 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IGN MSE A 1 ? UNP A1U3W3 ? ? 'INITIATING METHIONINE' 148 1 1 3IGN LEU A 170 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 317 2 1 3IGN GLU A 171 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 318 3 1 3IGN HIS A 172 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 319 4 1 3IGN HIS A 173 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 320 5 1 3IGN HIS A 174 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 321 6 1 3IGN HIS A 175 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 322 7 1 3IGN HIS A 176 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 323 8 1 3IGN HIS A 177 ? UNP A1U3W3 ? ? 'EXPRESSION TAG' 324 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C2E non-polymer . ;9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) ; 'c-di-GMP, Cyclic diguanosine monophosphate' 'C20 H24 N10 O14 P2' 690.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3IGN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_percent_sol 51.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '30% MPD, 0.1M magnesium acetate, 0.1M cacodylate, 3 mM GTP, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2009-07-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97900 # _reflns.entry_id 3IGN _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.83 _reflns.number_obs 35667 _reflns.number_all 35738 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.033 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 78.6 _reflns.B_iso_Wilson_estimate 29.14 _reflns.pdbx_redundancy 15.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.83 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.439 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.0 _reflns_shell.pdbx_redundancy 14.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1801 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3IGN _refine.ls_number_reflns_obs 35531 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.938 _refine.ls_d_res_high 1.830 _refine.ls_percent_reflns_obs 99.60 _refine.ls_R_factor_obs 0.1973 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1950 _refine.ls_R_factor_R_free 0.2405 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.09 _refine.ls_number_reflns_R_free 1810 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.1686 _refine.aniso_B[2][2] -0.1686 _refine.aniso_B[3][3] 0.3373 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.399 _refine.solvent_model_param_bsol 80.588 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.42 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error 23.50 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3IGN _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.19 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1301 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 92 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 1561 _refine_hist.d_res_high 1.830 _refine_hist.d_res_low 32.938 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? f_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.3 ? ? ? 'X-RAY DIFFRACTION' ? f_improper_angle_d 0.83 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.83 1.8792 2602 0.1919 100.00 0.3009 . . 136 . . . . 'X-RAY DIFFRACTION' . 1.8792 1.9345 2609 0.1900 100.00 0.2527 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.9345 1.9969 2641 0.1855 100.00 0.2298 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.9969 2.0682 2593 0.1694 100.00 0.2224 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.0682 2.1510 2578 0.1784 100.00 0.2862 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.1510 2.2489 2594 0.1799 100.00 0.2624 . . 157 . . . . 'X-RAY DIFFRACTION' . 2.2489 2.3674 2584 0.1919 100.00 0.2189 . . 165 . . . . 'X-RAY DIFFRACTION' . 2.3674 2.5157 2585 0.1848 100.00 0.2487 . . 118 . . . . 'X-RAY DIFFRACTION' . 2.5157 2.7099 2602 0.2144 100.00 0.2589 . . 154 . . . . 'X-RAY DIFFRACTION' . 2.7099 2.9824 2572 0.2002 100.00 0.2712 . . 159 . . . . 'X-RAY DIFFRACTION' . 2.9824 3.4136 2616 0.1847 100.00 0.2282 . . 114 . . . . 'X-RAY DIFFRACTION' . 3.4136 4.2993 2596 0.1732 100.00 0.1990 . . 131 . . . . 'X-RAY DIFFRACTION' . 4.2993 32.9434 2549 0.2132 97.00 0.2189 . . 132 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3IGN _struct.title ;Crystal Structure of the GGDEF domain from Marinobacter aquaeolei diguanylate cyclase complexed with c-di-GMP - Northeast Structural Genomics Consortium Target MqR89a ; _struct.pdbx_descriptor 'Diguanylate cyclase (E.C.2.7.7.65)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3IGN _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Diguanylate cyclase, GGDEF domain, A1U3W3_MARAV, NESG, MqR89a, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 19 ? GLY A 37 ? ARG A 166 GLY A 184 1 ? 19 HELX_P HELX_P2 2 HIS A 49 ? GLY A 58 ? HIS A 196 GLY A 205 1 ? 10 HELX_P HELX_P3 3 GLY A 58 ? ASN A 75 ? GLY A 205 ASN A 222 1 ? 18 HELX_P HELX_P4 4 ASP A 99 ? LYS A 116 ? ASP A 246 LYS A 263 1 ? 18 HELX_P HELX_P5 5 ASN A 143 ? SER A 161 ? ASN A 290 SER A 308 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 8 C ? ? ? 1_555 A MSE 9 N ? ? A SER 155 A MSE 156 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 9 C ? ? ? 1_555 A THR 10 N ? ? A MSE 156 A THR 157 1_555 ? ? ? ? ? ? ? 1.325 ? covale3 covale ? ? A VAL 43 C ? ? ? 1_555 A MSE 44 N ? ? A VAL 190 A MSE 191 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 44 C ? ? ? 1_555 A PHE 45 N ? ? A MSE 191 A PHE 192 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A SER 131 C ? ? ? 1_555 A MSE 132 N ? ? A SER 278 A MSE 279 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale ? ? A MSE 132 C ? ? ? 1_555 A GLY 133 N ? ? A MSE 279 A GLY 280 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A TYR 144 C ? ? ? 1_555 A MSE 145 N ? ? A TYR 291 A MSE 292 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale ? ? A MSE 145 C ? ? ? 1_555 A GLN 146 N ? ? A MSE 292 A GLN 293 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale ? ? A TRP 147 C ? ? ? 1_555 A MSE 148 N ? ? A TRP 294 A MSE 295 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? A MSE 148 C ? ? ? 1_555 A GLN 149 N ? ? A MSE 295 A GLN 296 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 17 ? ASN A 18 ? LEU A 164 ASN A 165 A 2 SER A 82 ? ARG A 85 ? SER A 229 ARG A 232 A 3 GLU A 90 ? PRO A 96 ? GLU A 237 PRO A 243 A 4 THR A 40 ? ILE A 47 ? THR A 187 ILE A 194 A 5 VAL A 130 ? GLN A 136 ? VAL A 277 GLN A 283 A 6 VAL A 166 ? VAL A 168 ? VAL A 313 VAL A 315 B 1 VAL A 119 ? SER A 120 ? VAL A 266 SER A 267 B 2 ASP A 125 ? ILE A 126 ? ASP A 272 ILE A 273 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 17 ? N LEU A 164 O ARG A 85 ? O ARG A 232 A 2 3 N GLY A 84 ? N GLY A 231 O GLY A 92 ? O GLY A 239 A 3 4 O PHE A 91 ? O PHE A 238 N PHE A 45 ? N PHE A 192 A 4 5 N MSE A 44 ? N MSE A 191 O GLY A 133 ? O GLY A 280 A 5 6 N MSE A 132 ? N MSE A 279 O VAL A 167 ? O VAL A 314 B 1 2 N VAL A 119 ? N VAL A 266 O ILE A 126 ? O ILE A 273 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE C2E A 401' AC2 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE C2E A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 35 ? ARG A 182 . ? 7_466 ? 2 AC1 17 TYR A 36 ? TYR A 183 . ? 7_466 ? 3 AC1 17 ASN A 76 ? ASN A 223 . ? 1_555 ? 4 AC1 17 ARG A 78 ? ARG A 225 . ? 1_555 ? 5 AC1 17 ASP A 81 ? ASP A 228 . ? 1_555 ? 6 AC1 17 THR A 98 ? THR A 245 . ? 1_555 ? 7 AC1 17 SER A 102 ? SER A 249 . ? 1_555 ? 8 AC1 17 VAL A 105 ? VAL A 252 . ? 1_555 ? 9 AC1 17 ILE A 106 ? ILE A 253 . ? 1_555 ? 10 AC1 17 ARG A 109 ? ARG A 256 . ? 1_555 ? 11 AC1 17 LYS A 157 ? LYS A 304 . ? 4_465 ? 12 AC1 17 C2E C . ? C2E A 402 . ? 1_555 ? 13 AC1 17 HOH D . ? HOH A 507 . ? 1_555 ? 14 AC1 17 HOH D . ? HOH A 520 . ? 7_466 ? 15 AC1 17 HOH D . ? HOH A 535 . ? 1_555 ? 16 AC1 17 HOH D . ? HOH A 564 . ? 1_555 ? 17 AC1 17 HOH D . ? HOH A 612 . ? 1_555 ? 18 AC2 17 ARG A 35 ? ARG A 182 . ? 7_466 ? 19 AC2 17 ASN A 76 ? ASN A 223 . ? 1_555 ? 20 AC2 17 ILE A 77 ? ILE A 224 . ? 1_555 ? 21 AC2 17 ARG A 78 ? ARG A 225 . ? 1_555 ? 22 AC2 17 GLN A 79 ? GLN A 226 . ? 1_555 ? 23 AC2 17 ARG A 109 ? ARG A 256 . ? 1_555 ? 24 AC2 17 LYS A 157 ? LYS A 304 . ? 4_465 ? 25 AC2 17 GLU A 160 ? GLU A 307 . ? 4_465 ? 26 AC2 17 C2E B . ? C2E A 401 . ? 1_555 ? 27 AC2 17 HOH D . ? HOH A 527 . ? 4_465 ? 28 AC2 17 HOH D . ? HOH A 532 . ? 1_555 ? 29 AC2 17 HOH D . ? HOH A 585 . ? 1_555 ? 30 AC2 17 HOH D . ? HOH A 602 . ? 1_555 ? 31 AC2 17 HOH D . ? HOH A 612 . ? 1_555 ? 32 AC2 17 HOH D . ? HOH A 625 . ? 1_555 ? 33 AC2 17 HOH D . ? HOH A 657 . ? 1_555 ? 34 AC2 17 HOH D . ? HOH A 664 . ? 1_555 ? # _database_PDB_matrix.entry_id 3IGN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3IGN _atom_sites.fract_transf_matrix[1][1] 0.016884 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016884 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008411 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 148 ? ? ? A . n A 1 2 GLU 2 149 ? ? ? A . n A 1 3 GLN 3 150 ? ? ? A . n A 1 4 LEU 4 151 ? ? ? A . n A 1 5 ALA 5 152 152 ALA ALA A . n A 1 6 LYS 6 153 153 LYS LYS A . n A 1 7 LEU 7 154 154 LEU LEU A . n A 1 8 SER 8 155 155 SER SER A . n A 1 9 MSE 9 156 156 MSE MSE A . n A 1 10 THR 10 157 157 THR THR A . n A 1 11 ASP 11 158 158 ASP ASP A . n A 1 12 ARG 12 159 159 ARG ARG A . n A 1 13 LEU 13 160 160 LEU LEU A . n A 1 14 THR 14 161 161 THR THR A . n A 1 15 GLY 15 162 162 GLY GLY A . n A 1 16 LEU 16 163 163 LEU LEU A . n A 1 17 LEU 17 164 164 LEU LEU A . n A 1 18 ASN 18 165 165 ASN ASN A . n A 1 19 ARG 19 166 166 ARG ARG A . n A 1 20 GLY 20 167 167 GLY GLY A . n A 1 21 THR 21 168 168 THR THR A . n A 1 22 TRP 22 169 169 TRP TRP A . n A 1 23 GLU 23 170 170 GLU GLU A . n A 1 24 ASN 24 171 171 ASN ASN A . n A 1 25 LEU 25 172 172 LEU LEU A . n A 1 26 VAL 26 173 173 VAL VAL A . n A 1 27 ASP 27 174 174 ASP ASP A . n A 1 28 ALA 28 175 175 ALA ALA A . n A 1 29 GLU 29 176 176 GLU GLU A . n A 1 30 TYR 30 177 177 TYR TYR A . n A 1 31 GLU 31 178 178 GLU GLU A . n A 1 32 ARG 32 179 179 ARG ARG A . n A 1 33 PHE 33 180 180 PHE PHE A . n A 1 34 ARG 34 181 181 ARG ARG A . n A 1 35 ARG 35 182 182 ARG ARG A . n A 1 36 TYR 36 183 183 TYR TYR A . n A 1 37 GLY 37 184 184 GLY GLY A . n A 1 38 GLN 38 185 185 GLN GLN A . n A 1 39 ALA 39 186 186 ALA ALA A . n A 1 40 THR 40 187 187 THR THR A . n A 1 41 SER 41 188 188 SER SER A . n A 1 42 LEU 42 189 189 LEU LEU A . n A 1 43 VAL 43 190 190 VAL VAL A . n A 1 44 MSE 44 191 191 MSE MSE A . n A 1 45 PHE 45 192 192 PHE PHE A . n A 1 46 ASP 46 193 193 ASP ASP A . n A 1 47 ILE 47 194 194 ILE ILE A . n A 1 48 ASP 48 195 195 ASP ASP A . n A 1 49 HIS 49 196 196 HIS HIS A . n A 1 50 PHE 50 197 197 PHE PHE A . n A 1 51 LYS 51 198 198 LYS LYS A . n A 1 52 PRO 52 199 199 PRO PRO A . n A 1 53 VAL 53 200 200 VAL VAL A . n A 1 54 ASN 54 201 201 ASN ASN A . n A 1 55 ASP 55 202 202 ASP ASP A . n A 1 56 THR 56 203 203 THR THR A . n A 1 57 TYR 57 204 204 TYR TYR A . n A 1 58 GLY 58 205 205 GLY GLY A . n A 1 59 HIS 59 206 206 HIS HIS A . n A 1 60 LEU 60 207 207 LEU LEU A . n A 1 61 ALA 61 208 208 ALA ALA A . n A 1 62 GLY 62 209 209 GLY GLY A . n A 1 63 ASP 63 210 210 ASP ASP A . n A 1 64 GLU 64 211 211 GLU GLU A . n A 1 65 VAL 65 212 212 VAL VAL A . n A 1 66 ILE 66 213 213 ILE ILE A . n A 1 67 ARG 67 214 214 ARG ARG A . n A 1 68 HIS 68 215 215 HIS HIS A . n A 1 69 THR 69 216 216 THR THR A . n A 1 70 ALA 70 217 217 ALA ALA A . n A 1 71 ASP 71 218 218 ASP ASP A . n A 1 72 VAL 72 219 219 VAL VAL A . n A 1 73 THR 73 220 220 THR THR A . n A 1 74 ARG 74 221 221 ARG ARG A . n A 1 75 ASN 75 222 222 ASN ASN A . n A 1 76 ASN 76 223 223 ASN ASN A . n A 1 77 ILE 77 224 224 ILE ILE A . n A 1 78 ARG 78 225 225 ARG ARG A . n A 1 79 GLN 79 226 226 GLN GLN A . n A 1 80 SER 80 227 227 SER SER A . n A 1 81 ASP 81 228 228 ASP ASP A . n A 1 82 SER 82 229 229 SER SER A . n A 1 83 ALA 83 230 230 ALA ALA A . n A 1 84 GLY 84 231 231 GLY GLY A . n A 1 85 ARG 85 232 232 ARG ARG A . n A 1 86 TYR 86 233 233 TYR TYR A . n A 1 87 GLY 87 234 234 GLY GLY A . n A 1 88 GLY 88 235 235 GLY GLY A . n A 1 89 GLU 89 236 236 GLU GLU A . n A 1 90 GLU 90 237 237 GLU GLU A . n A 1 91 PHE 91 238 238 PHE PHE A . n A 1 92 GLY 92 239 239 GLY GLY A . n A 1 93 ILE 93 240 240 ILE ILE A . n A 1 94 ILE 94 241 241 ILE ILE A . n A 1 95 LEU 95 242 242 LEU LEU A . n A 1 96 PRO 96 243 243 PRO PRO A . n A 1 97 GLU 97 244 244 GLU GLU A . n A 1 98 THR 98 245 245 THR THR A . n A 1 99 ASP 99 246 246 ASP ASP A . n A 1 100 ALA 100 247 247 ALA ALA A . n A 1 101 GLU 101 248 248 GLU GLU A . n A 1 102 SER 102 249 249 SER SER A . n A 1 103 ALA 103 250 250 ALA ALA A . n A 1 104 ARG 104 251 251 ARG ARG A . n A 1 105 VAL 105 252 252 VAL VAL A . n A 1 106 ILE 106 253 253 ILE ILE A . n A 1 107 CYS 107 254 254 CYS CYS A . n A 1 108 GLU 108 255 255 GLU GLU A . n A 1 109 ARG 109 256 256 ARG ARG A . n A 1 110 ILE 110 257 257 ILE ILE A . n A 1 111 ARG 111 258 258 ARG ARG A . n A 1 112 GLU 112 259 259 GLU GLU A . n A 1 113 ALA 113 260 260 ALA ALA A . n A 1 114 ILE 114 261 261 ILE ILE A . n A 1 115 GLU 115 262 262 GLU GLU A . n A 1 116 LYS 116 263 263 LYS ALA A . n A 1 117 SER 117 264 264 SER SER A . n A 1 118 THR 118 265 265 THR THR A . n A 1 119 VAL 119 266 266 VAL VAL A . n A 1 120 SER 120 267 267 SER ALA A . n A 1 121 THR 121 268 268 THR ALA A . n A 1 122 SER 122 269 269 SER ALA A . n A 1 123 ALA 123 270 270 ALA ALA A . n A 1 124 GLY 124 271 271 GLY GLY A . n A 1 125 ASP 125 272 272 ASP ASP A . n A 1 126 ILE 126 273 273 ILE ILE A . n A 1 127 GLN 127 274 274 GLN GLN A . n A 1 128 TYR 128 275 275 TYR TYR A . n A 1 129 THR 129 276 276 THR THR A . n A 1 130 VAL 130 277 277 VAL VAL A . n A 1 131 SER 131 278 278 SER SER A . n A 1 132 MSE 132 279 279 MSE MSE A . n A 1 133 GLY 133 280 280 GLY GLY A . n A 1 134 ILE 134 281 281 ILE ILE A . n A 1 135 ALA 135 282 282 ALA ALA A . n A 1 136 GLN 136 283 283 GLN GLN A . n A 1 137 LEU 137 284 284 LEU LEU A . n A 1 138 THR 138 285 285 THR THR A . n A 1 139 GLU 139 286 286 GLU GLU A . n A 1 140 THR 140 287 287 THR THR A . n A 1 141 PRO 141 288 288 PRO PRO A . n A 1 142 GLU 142 289 289 GLU GLU A . n A 1 143 ASN 143 290 290 ASN ASN A . n A 1 144 TYR 144 291 291 TYR TYR A . n A 1 145 MSE 145 292 292 MSE MSE A . n A 1 146 GLN 146 293 293 GLN GLN A . n A 1 147 TRP 147 294 294 TRP TRP A . n A 1 148 MSE 148 295 295 MSE MSE A . n A 1 149 GLN 149 296 296 GLN GLN A . n A 1 150 LYS 150 297 297 LYS LYS A . n A 1 151 ALA 151 298 298 ALA ALA A . n A 1 152 ASP 152 299 299 ASP ASP A . n A 1 153 GLU 153 300 300 GLU GLU A . n A 1 154 ALA 154 301 301 ALA ALA A . n A 1 155 LEU 155 302 302 LEU LEU A . n A 1 156 TYR 156 303 303 TYR TYR A . n A 1 157 LYS 157 304 304 LYS LYS A . n A 1 158 ALA 158 305 305 ALA ALA A . n A 1 159 LYS 159 306 306 LYS LYS A . n A 1 160 GLU 160 307 307 GLU GLU A . n A 1 161 SER 161 308 308 SER SER A . n A 1 162 GLY 162 309 309 GLY GLY A . n A 1 163 ARG 163 310 310 ARG ARG A . n A 1 164 ASN 164 311 311 ASN ASN A . n A 1 165 LYS 165 312 312 LYS LYS A . n A 1 166 VAL 166 313 313 VAL VAL A . n A 1 167 VAL 167 314 314 VAL VAL A . n A 1 168 VAL 168 315 315 VAL VAL A . n A 1 169 SER 169 316 316 SER SER A . n A 1 170 LEU 170 317 317 LEU ALA A . n A 1 171 GLU 171 318 ? ? ? A . n A 1 172 HIS 172 319 ? ? ? A . n A 1 173 HIS 173 320 ? ? ? A . n A 1 174 HIS 174 321 ? ? ? A . n A 1 175 HIS 175 322 ? ? ? A . n A 1 176 HIS 176 323 ? ? ? A . n A 1 177 HIS 177 324 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C2E 1 401 401 C2E C2E A . C 2 C2E 1 402 402 C2E C2E A . D 3 HOH 1 501 501 HOH WAT A . D 3 HOH 2 502 502 HOH WAT A . D 3 HOH 3 503 503 HOH WAT A . D 3 HOH 4 505 505 HOH WAT A . D 3 HOH 5 507 507 HOH WAT A . D 3 HOH 6 508 508 HOH WAT A . D 3 HOH 7 509 509 HOH WAT A . D 3 HOH 8 511 511 HOH WAT A . D 3 HOH 9 512 512 HOH WAT A . D 3 HOH 10 513 513 HOH WAT A . D 3 HOH 11 514 514 HOH WAT A . D 3 HOH 12 515 515 HOH WAT A . D 3 HOH 13 516 516 HOH WAT A . D 3 HOH 14 517 517 HOH WAT A . D 3 HOH 15 518 518 HOH WAT A . D 3 HOH 16 519 519 HOH WAT A . D 3 HOH 17 520 520 HOH WAT A . D 3 HOH 18 521 521 HOH WAT A . D 3 HOH 19 522 522 HOH WAT A . D 3 HOH 20 523 523 HOH WAT A . D 3 HOH 21 524 524 HOH WAT A . D 3 HOH 22 525 525 HOH WAT A . D 3 HOH 23 526 526 HOH WAT A . D 3 HOH 24 527 527 HOH WAT A . D 3 HOH 25 528 528 HOH WAT A . D 3 HOH 26 529 529 HOH WAT A . D 3 HOH 27 530 530 HOH WAT A . D 3 HOH 28 531 531 HOH WAT A . D 3 HOH 29 532 532 HOH WAT A . D 3 HOH 30 533 533 HOH WAT A . D 3 HOH 31 534 534 HOH WAT A . D 3 HOH 32 535 535 HOH WAT A . D 3 HOH 33 536 536 HOH WAT A . D 3 HOH 34 537 537 HOH WAT A . D 3 HOH 35 538 538 HOH WAT A . D 3 HOH 36 539 539 HOH WAT A . D 3 HOH 37 540 540 HOH WAT A . D 3 HOH 38 541 541 HOH WAT A . D 3 HOH 39 542 542 HOH WAT A . D 3 HOH 40 543 543 HOH WAT A . D 3 HOH 41 544 544 HOH WAT A . D 3 HOH 42 545 545 HOH WAT A . D 3 HOH 43 546 546 HOH WAT A . D 3 HOH 44 547 547 HOH WAT A . D 3 HOH 45 548 548 HOH WAT A . D 3 HOH 46 549 549 HOH WAT A . D 3 HOH 47 550 550 HOH WAT A . D 3 HOH 48 551 551 HOH WAT A . D 3 HOH 49 552 552 HOH WAT A . D 3 HOH 50 553 553 HOH WAT A . D 3 HOH 51 554 554 HOH WAT A . D 3 HOH 52 555 555 HOH WAT A . D 3 HOH 53 556 556 HOH WAT A . D 3 HOH 54 557 557 HOH WAT A . D 3 HOH 55 558 558 HOH WAT A . D 3 HOH 56 560 560 HOH WAT A . D 3 HOH 57 561 561 HOH WAT A . D 3 HOH 58 562 562 HOH WAT A . D 3 HOH 59 563 563 HOH WAT A . D 3 HOH 60 564 564 HOH WAT A . D 3 HOH 61 565 565 HOH WAT A . D 3 HOH 62 566 566 HOH WAT A . D 3 HOH 63 567 567 HOH WAT A . D 3 HOH 64 568 568 HOH WAT A . D 3 HOH 65 569 569 HOH WAT A . D 3 HOH 66 570 570 HOH WAT A . D 3 HOH 67 571 571 HOH WAT A . D 3 HOH 68 572 572 HOH WAT A . D 3 HOH 69 573 573 HOH WAT A . D 3 HOH 70 574 574 HOH WAT A . D 3 HOH 71 575 575 HOH WAT A . D 3 HOH 72 576 576 HOH WAT A . D 3 HOH 73 578 578 HOH WAT A . D 3 HOH 74 579 579 HOH WAT A . D 3 HOH 75 580 580 HOH WAT A . D 3 HOH 76 581 581 HOH WAT A . D 3 HOH 77 582 582 HOH WAT A . D 3 HOH 78 583 583 HOH WAT A . D 3 HOH 79 584 584 HOH WAT A . D 3 HOH 80 585 585 HOH WAT A . D 3 HOH 81 586 586 HOH WAT A . D 3 HOH 82 587 587 HOH WAT A . D 3 HOH 83 588 588 HOH WAT A . D 3 HOH 84 589 589 HOH WAT A . D 3 HOH 85 590 590 HOH WAT A . D 3 HOH 86 591 591 HOH WAT A . D 3 HOH 87 592 592 HOH WAT A . D 3 HOH 88 594 594 HOH WAT A . D 3 HOH 89 596 596 HOH WAT A . D 3 HOH 90 597 597 HOH WAT A . D 3 HOH 91 598 598 HOH WAT A . D 3 HOH 92 599 599 HOH WAT A . D 3 HOH 93 600 600 HOH WAT A . D 3 HOH 94 601 601 HOH WAT A . D 3 HOH 95 602 602 HOH WAT A . D 3 HOH 96 603 603 HOH WAT A . D 3 HOH 97 604 604 HOH WAT A . D 3 HOH 98 605 605 HOH WAT A . D 3 HOH 99 606 606 HOH WAT A . D 3 HOH 100 607 607 HOH WAT A . D 3 HOH 101 608 608 HOH WAT A . D 3 HOH 102 609 609 HOH WAT A . D 3 HOH 103 610 610 HOH WAT A . D 3 HOH 104 611 611 HOH WAT A . D 3 HOH 105 612 612 HOH WAT A . D 3 HOH 106 613 613 HOH WAT A . D 3 HOH 107 614 614 HOH WAT A . D 3 HOH 108 615 615 HOH WAT A . D 3 HOH 109 616 616 HOH WAT A . D 3 HOH 110 617 617 HOH WAT A . D 3 HOH 111 618 618 HOH WAT A . D 3 HOH 112 619 619 HOH WAT A . D 3 HOH 113 620 620 HOH WAT A . D 3 HOH 114 621 621 HOH WAT A . D 3 HOH 115 622 622 HOH WAT A . D 3 HOH 116 623 623 HOH WAT A . D 3 HOH 117 624 624 HOH WAT A . D 3 HOH 118 625 625 HOH WAT A . D 3 HOH 119 626 626 HOH WAT A . D 3 HOH 120 627 627 HOH WAT A . D 3 HOH 121 628 628 HOH WAT A . D 3 HOH 122 629 629 HOH WAT A . D 3 HOH 123 630 630 HOH WAT A . D 3 HOH 124 631 631 HOH WAT A . D 3 HOH 125 632 632 HOH WAT A . D 3 HOH 126 633 633 HOH WAT A . D 3 HOH 127 634 634 HOH WAT A . D 3 HOH 128 635 635 HOH WAT A . D 3 HOH 129 636 636 HOH WAT A . D 3 HOH 130 637 637 HOH WAT A . D 3 HOH 131 638 638 HOH WAT A . D 3 HOH 132 639 639 HOH WAT A . D 3 HOH 133 640 640 HOH WAT A . D 3 HOH 134 641 641 HOH WAT A . D 3 HOH 135 642 642 HOH WAT A . D 3 HOH 136 643 643 HOH WAT A . D 3 HOH 137 644 644 HOH WAT A . D 3 HOH 138 645 645 HOH WAT A . D 3 HOH 139 646 646 HOH WAT A . D 3 HOH 140 647 647 HOH WAT A . D 3 HOH 141 648 648 HOH WAT A . D 3 HOH 142 649 649 HOH WAT A . D 3 HOH 143 650 650 HOH WAT A . D 3 HOH 144 651 651 HOH WAT A . D 3 HOH 145 652 652 HOH WAT A . D 3 HOH 146 653 653 HOH WAT A . D 3 HOH 147 654 654 HOH WAT A . D 3 HOH 148 655 655 HOH WAT A . D 3 HOH 149 656 656 HOH WAT A . D 3 HOH 150 657 657 HOH WAT A . D 3 HOH 151 658 658 HOH WAT A . D 3 HOH 152 659 659 HOH WAT A . D 3 HOH 153 660 660 HOH WAT A . D 3 HOH 154 661 661 HOH WAT A . D 3 HOH 155 662 662 HOH WAT A . D 3 HOH 156 663 663 HOH WAT A . D 3 HOH 157 664 664 HOH WAT A . D 3 HOH 158 665 665 HOH WAT A . D 3 HOH 159 667 667 HOH WAT A . D 3 HOH 160 669 669 HOH WAT A . D 3 HOH 161 670 670 HOH WAT A . D 3 HOH 162 671 671 HOH WAT A . D 3 HOH 163 672 672 HOH WAT A . D 3 HOH 164 673 673 HOH WAT A . D 3 HOH 165 674 674 HOH WAT A . D 3 HOH 166 675 675 HOH WAT A . D 3 HOH 167 676 676 HOH WAT A . D 3 HOH 168 677 677 HOH WAT A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 9 A MSE 156 ? MET SELENOMETHIONINE 2 A MSE 44 A MSE 191 ? MET SELENOMETHIONINE 3 A MSE 132 A MSE 279 ? MET SELENOMETHIONINE 4 A MSE 145 A MSE 292 ? MET SELENOMETHIONINE 5 A MSE 148 A MSE 295 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2016-05-11 4 'Structure model' 1 3 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SnB phasing . ? 2 RESOLVE 'model building' . ? 3 PHENIX refinement '(phenix.refine)' ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 RESOLVE phasing . ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 153 ? ? -99.97 39.19 2 1 ARG A 310 ? ? 68.30 178.42 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 263 ? CG ? A LYS 116 CG 2 1 Y 1 A LYS 263 ? CD ? A LYS 116 CD 3 1 Y 1 A LYS 263 ? CE ? A LYS 116 CE 4 1 Y 1 A LYS 263 ? NZ ? A LYS 116 NZ 5 1 Y 1 A SER 267 ? OG ? A SER 120 OG 6 1 Y 1 A THR 268 ? OG1 ? A THR 121 OG1 7 1 Y 1 A THR 268 ? CG2 ? A THR 121 CG2 8 1 Y 1 A SER 269 ? OG ? A SER 122 OG 9 1 Y 1 A LEU 317 ? CG ? A LEU 170 CG 10 1 Y 1 A LEU 317 ? CD1 ? A LEU 170 CD1 11 1 Y 1 A LEU 317 ? CD2 ? A LEU 170 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 148 ? A MSE 1 2 1 Y 1 A GLU 149 ? A GLU 2 3 1 Y 1 A GLN 150 ? A GLN 3 4 1 Y 1 A LEU 151 ? A LEU 4 5 1 Y 1 A GLU 318 ? A GLU 171 6 1 Y 1 A HIS 319 ? A HIS 172 7 1 Y 1 A HIS 320 ? A HIS 173 8 1 Y 1 A HIS 321 ? A HIS 174 9 1 Y 1 A HIS 322 ? A HIS 175 10 1 Y 1 A HIS 323 ? A HIS 176 11 1 Y 1 A HIS 324 ? A HIS 177 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) ; C2E 3 water HOH #