data_3IIC # _entry.id 3IIC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3IIC pdb_00003iic 10.2210/pdb3iic/pdb RCSB RCSB054447 ? ? WWPDB D_1000054447 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394125 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3IIC _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-07-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of CheC-like superfamily protein (YP_001095400.1) from Shewanella SP. PV-4 at 2.13 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3IIC _cell.length_a 43.646 _cell.length_b 52.075 _cell.length_c 134.429 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3IIC _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CheC domain protein' 17238.473 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)NVDFINPFLDSLLNVLKT(MSE)AN(MSE)ELKPGKPNLKKDNLAKGDVSGLIG(MSE)VGPQTKGSLSITFEE TLILEI(MSE)NK(MSE)LGEKPESIDEEVTDLVGELTN(MSE)VTGGAKNLLSDKGYEFD(MSE)ATPIVVSGKNHTIA HKSDGQKII(MSE)PFSSIYGTAYIEICFEG ; _entity_poly.pdbx_seq_one_letter_code_can ;GMNVDFINPFLDSLLNVLKTMANMELKPGKPNLKKDNLAKGDVSGLIGMVGPQTKGSLSITFEETLILEIMNKMLGEKPE SIDEEVTDLVGELTNMVTGGAKNLLSDKGYEFDMATPIVVSGKNHTIAHKSDGQKIIMPFSSIYGTAYIEICFEG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 394125 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASN n 1 4 VAL n 1 5 ASP n 1 6 PHE n 1 7 ILE n 1 8 ASN n 1 9 PRO n 1 10 PHE n 1 11 LEU n 1 12 ASP n 1 13 SER n 1 14 LEU n 1 15 LEU n 1 16 ASN n 1 17 VAL n 1 18 LEU n 1 19 LYS n 1 20 THR n 1 21 MSE n 1 22 ALA n 1 23 ASN n 1 24 MSE n 1 25 GLU n 1 26 LEU n 1 27 LYS n 1 28 PRO n 1 29 GLY n 1 30 LYS n 1 31 PRO n 1 32 ASN n 1 33 LEU n 1 34 LYS n 1 35 LYS n 1 36 ASP n 1 37 ASN n 1 38 LEU n 1 39 ALA n 1 40 LYS n 1 41 GLY n 1 42 ASP n 1 43 VAL n 1 44 SER n 1 45 GLY n 1 46 LEU n 1 47 ILE n 1 48 GLY n 1 49 MSE n 1 50 VAL n 1 51 GLY n 1 52 PRO n 1 53 GLN n 1 54 THR n 1 55 LYS n 1 56 GLY n 1 57 SER n 1 58 LEU n 1 59 SER n 1 60 ILE n 1 61 THR n 1 62 PHE n 1 63 GLU n 1 64 GLU n 1 65 THR n 1 66 LEU n 1 67 ILE n 1 68 LEU n 1 69 GLU n 1 70 ILE n 1 71 MSE n 1 72 ASN n 1 73 LYS n 1 74 MSE n 1 75 LEU n 1 76 GLY n 1 77 GLU n 1 78 LYS n 1 79 PRO n 1 80 GLU n 1 81 SER n 1 82 ILE n 1 83 ASP n 1 84 GLU n 1 85 GLU n 1 86 VAL n 1 87 THR n 1 88 ASP n 1 89 LEU n 1 90 VAL n 1 91 GLY n 1 92 GLU n 1 93 LEU n 1 94 THR n 1 95 ASN n 1 96 MSE n 1 97 VAL n 1 98 THR n 1 99 GLY n 1 100 GLY n 1 101 ALA n 1 102 LYS n 1 103 ASN n 1 104 LEU n 1 105 LEU n 1 106 SER n 1 107 ASP n 1 108 LYS n 1 109 GLY n 1 110 TYR n 1 111 GLU n 1 112 PHE n 1 113 ASP n 1 114 MSE n 1 115 ALA n 1 116 THR n 1 117 PRO n 1 118 ILE n 1 119 VAL n 1 120 VAL n 1 121 SER n 1 122 GLY n 1 123 LYS n 1 124 ASN n 1 125 HIS n 1 126 THR n 1 127 ILE n 1 128 ALA n 1 129 HIS n 1 130 LYS n 1 131 SER n 1 132 ASP n 1 133 GLY n 1 134 GLN n 1 135 LYS n 1 136 ILE n 1 137 ILE n 1 138 MSE n 1 139 PRO n 1 140 PHE n 1 141 SER n 1 142 SER n 1 143 ILE n 1 144 TYR n 1 145 GLY n 1 146 THR n 1 147 ALA n 1 148 TYR n 1 149 ILE n 1 150 GLU n 1 151 ILE n 1 152 CYS n 1 153 PHE n 1 154 GLU n 1 155 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Shew_3275, YP_001095400.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella loihica PV-4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 323850 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 'BAA-1088 / PV-4' _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A3QI43_SHELP _struct_ref.pdbx_db_accession A3QI43 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNVDFINPFLDSLLNVLKTMANMELKPGKPNLKKDNLAKGDVSGLIGMVGPQTKGSLSITFEETLILEIMNKMLGEKPES IDEEVTDLVGELTNMVTGGAKNLLSDKGYEFDMATPIVVSGKNHTIAHKSDGQKIIMPFSSIYGTAYIEICFEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3IIC A 2 ? 155 ? A3QI43 1 ? 154 ? 1 154 2 1 3IIC B 2 ? 155 ? A3QI43 1 ? 154 ? 1 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3IIC GLY A 1 ? UNP A3QI43 ? ? 'expression tag' 0 1 2 3IIC GLY B 1 ? UNP A3QI43 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3IIC # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2000M K2HPO4, 20.0000% PEG-3350, No Buffer pH 9.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-04-16 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97795 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3IIC _reflns.d_resolution_high 2.13 _reflns.d_resolution_low 48.564 _reflns.number_obs 17765 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_netI_over_sigmaI 10.880 _reflns.percent_possible_obs 99.200 _reflns.B_iso_Wilson_estimate 36.717 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.94 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.13 2.21 7348 ? 1821 0.564 2.4 ? ? ? ? ? 99.20 1 1 2.21 2.29 6332 ? 1580 0.456 2.8 ? ? ? ? ? 99.40 2 1 2.29 2.40 7362 ? 1831 0.335 3.9 ? ? ? ? ? 99.70 3 1 2.40 2.52 6762 ? 1678 0.281 4.6 ? ? ? ? ? 99.80 4 1 2.52 2.68 7142 ? 1773 0.200 6.2 ? ? ? ? ? 99.00 5 1 2.68 2.89 7237 ? 1800 0.131 8.7 ? ? ? ? ? 99.10 6 1 2.89 3.18 7010 ? 1756 0.089 12.2 ? ? ? ? ? 99.40 7 1 3.18 3.64 7088 ? 1799 0.055 18.0 ? ? ? ? ? 99.30 8 1 3.64 4.57 6918 ? 1786 0.043 23.1 ? ? ? ? ? 99.50 9 1 4.57 48.564 6901 ? 1940 0.044 24.6 ? ? ? ? ? 98.20 10 1 # _refine.entry_id 3IIC _refine.ls_d_res_high 2.130 _refine.ls_d_res_low 48.564 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.370 _refine.ls_number_reflns_obs 17733 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. ETHYLENE GLYCOL, USED AS A CRYOPROTECTANT IS MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_R_work 0.211 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.256 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 907 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 40.646 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 4.540 _refine.aniso_B[2][2] -2.240 _refine.aniso_B[3][3] -2.300 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.259 _refine.pdbx_overall_ESU_R_Free 0.209 _refine.overall_SU_ML 0.191 _refine.overall_SU_B 17.136 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 64.70 _refine.B_iso_min 16.69 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2298 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 2341 _refine_hist.d_res_high 2.130 _refine_hist.d_res_low 48.564 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2365 0.016 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1551 0.003 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3202 1.722 1.997 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3878 1.301 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 316 4.026 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 88 29.258 27.500 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 434 12.084 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 378 0.099 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2619 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 389 0.002 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1539 0.513 1.500 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 635 0.141 1.500 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2489 0.943 2.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 826 1.718 3.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 708 2.528 4.500 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' A 1770 0.390 0.500 1 ? ? ? 'X-RAY DIFFRACTION' 1 1 'LOOSE POSITIONAL' A 49 1.170 5.000 2 ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' A 1770 0.800 2.000 3 ? ? ? 'X-RAY DIFFRACTION' 1 1 'LOOSE THERMAL' A 49 1.640 10.000 4 ? ? ? # _refine_ls_shell.d_res_high 2.130 _refine_ls_shell.d_res_low 2.185 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.310 _refine_ls_shell.number_reflns_R_work 1234 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.319 _refine_ls_shell.R_factor_R_free 0.337 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1303 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id 1 1 1 4 A 1 A 72 ? . . . . . . . . 1 2 1 4 B 1 B 72 ? . . . . . . . . 1 1 2 6 A 73 A 76 ? . . . . . . . . 1 2 2 6 B 73 B 76 ? . . . . . . . . 1 1 3 4 A 77 A 154 ? . . . . . . . . 1 2 3 4 B 77 B 154 ? . . . . . . . . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3IIC _struct.title 'Crystal structure of CheC-like superfamily protein (YP_001095400.1) from Shewanella SP. PV-4 at 2.13 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_001095400.1, CheC-like superfamily protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3IIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? ASN A 23 ? ASN A 2 ASN A 22 1 ? 21 HELX_P HELX_P2 2 GLU A 63 ? GLY A 76 ? GLU A 62 GLY A 75 1 ? 14 HELX_P HELX_P3 3 ASP A 83 ? LYS A 108 ? ASP A 82 LYS A 107 1 ? 26 HELX_P HELX_P4 4 ASN B 3 ? ASN B 23 ? ASN B 2 ASN B 22 1 ? 21 HELX_P HELX_P5 5 GLU B 63 ? GLY B 76 ? GLU B 62 GLY B 75 1 ? 14 HELX_P HELX_P6 6 ASP B 83 ? LYS B 108 ? ASP B 82 LYS B 107 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A ASN 3 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? A THR 20 C ? ? ? 1_555 A MSE 21 N ? ? A THR 19 A MSE 20 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A MSE 21 C ? ? ? 1_555 A ALA 22 N ? ? A MSE 20 A ALA 21 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A ASN 23 C ? ? ? 1_555 A MSE 24 N ? ? A ASN 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? A MSE 24 C ? ? ? 1_555 A GLU 25 N ? ? A MSE 23 A GLU 24 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A GLY 48 C ? ? ? 1_555 A MSE 49 N ? ? A GLY 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A MSE 49 C ? ? ? 1_555 A VAL 50 N ? ? A MSE 48 A VAL 49 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale8 covale both ? A ILE 70 C ? ? ? 1_555 A MSE 71 N ? ? A ILE 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale9 covale both ? A MSE 71 C ? ? ? 1_555 A ASN 72 N ? ? A MSE 70 A ASN 71 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale10 covale both ? A LYS 73 C ? ? ? 1_555 A MSE 74 N ? ? A LYS 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale11 covale both ? A MSE 74 C ? ? ? 1_555 A LEU 75 N ? ? A MSE 73 A LEU 74 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale12 covale both ? A ASN 95 C ? ? ? 1_555 A MSE 96 N ? ? A ASN 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale13 covale both ? A MSE 96 C ? ? ? 1_555 A VAL 97 N ? ? A MSE 95 A VAL 96 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale14 covale both ? A ASP 113 C ? ? ? 1_555 A MSE 114 N ? ? A ASP 112 A MSE 113 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale15 covale both ? A MSE 114 C ? ? ? 1_555 A ALA 115 N ? ? A MSE 113 A ALA 114 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale16 covale both ? A ILE 137 C ? ? ? 1_555 A MSE 138 N ? ? A ILE 136 A MSE 137 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale17 covale both ? A MSE 138 C ? ? ? 1_555 A PRO 139 N ? ? A MSE 137 A PRO 138 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale18 covale both ? B MSE 2 C ? ? ? 1_555 B ASN 3 N ? ? B MSE 1 B ASN 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale19 covale both ? B THR 20 C ? ? ? 1_555 B MSE 21 N ? ? B THR 19 B MSE 20 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale20 covale both ? B MSE 21 C ? ? ? 1_555 B ALA 22 N ? ? B MSE 20 B ALA 21 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale21 covale both ? B ASN 23 C ? ? ? 1_555 B MSE 24 N ? ? B ASN 22 B MSE 23 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale22 covale both ? B MSE 24 C ? ? ? 1_555 B GLU 25 N ? ? B MSE 23 B GLU 24 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale23 covale both ? B GLY 48 C ? ? ? 1_555 B MSE 49 N ? ? B GLY 47 B MSE 48 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale24 covale both ? B MSE 49 C ? ? ? 1_555 B VAL 50 N ? ? B MSE 48 B VAL 49 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale25 covale both ? B ILE 70 C ? ? ? 1_555 B MSE 71 N ? ? B ILE 69 B MSE 70 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale26 covale both ? B MSE 71 C ? ? ? 1_555 B ASN 72 N ? ? B MSE 70 B ASN 71 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale27 covale both ? B LYS 73 C ? ? ? 1_555 B MSE 74 N ? ? B LYS 72 B MSE 73 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale28 covale both ? B MSE 74 C ? ? ? 1_555 B LEU 75 N ? ? B MSE 73 B LEU 74 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale29 covale both ? B ASN 95 C ? ? ? 1_555 B MSE 96 N ? ? B ASN 94 B MSE 95 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale30 covale both ? B MSE 96 C ? ? ? 1_555 B VAL 97 N ? ? B MSE 95 B VAL 96 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale31 covale both ? B ASP 113 C ? ? ? 1_555 B MSE 114 N ? ? B ASP 112 B MSE 113 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale32 covale both ? B MSE 114 C ? ? ? 1_555 B ALA 115 N ? ? B MSE 113 B ALA 114 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale33 covale both ? B ILE 137 C ? ? ? 1_555 B MSE 138 N ? ? B ILE 136 B MSE 137 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale34 covale both ? B MSE 138 C ? ? ? 1_555 B PRO 139 N ? ? B MSE 137 B PRO 138 1_555 ? ? ? ? ? ? ? 1.360 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 27 ? PRO A 28 ? LYS A 26 PRO A 27 A 2 GLN A 134 ? SER A 141 ? GLN A 133 SER A 140 A 3 ALA A 147 ? GLU A 154 ? ALA A 146 GLU A 153 A 4 THR A 54 ? PHE A 62 ? THR A 53 PHE A 61 A 5 GLY A 41 ? GLY A 51 ? GLY A 40 GLY A 50 A 6 ILE A 118 ? HIS A 129 ? ILE A 117 HIS A 128 A 7 ILE B 118 ? HIS B 129 ? ILE B 117 HIS B 128 A 8 GLY B 41 ? GLY B 51 ? GLY B 40 GLY B 50 A 9 THR B 54 ? PHE B 62 ? THR B 53 PHE B 61 A 10 GLY B 145 ? GLU B 154 ? GLY B 144 GLU B 153 A 11 GLN B 134 ? SER B 142 ? GLN B 133 SER B 141 A 12 LYS B 27 ? PRO B 28 ? LYS B 26 PRO B 27 B 1 ASP A 113 ? MSE A 114 ? ASP A 112 MSE A 113 B 2 GLY A 41 ? GLY A 51 ? GLY A 40 GLY A 50 B 3 ILE A 118 ? HIS A 129 ? ILE A 117 HIS A 128 B 4 ILE B 118 ? HIS B 129 ? ILE B 117 HIS B 128 B 5 GLY B 41 ? GLY B 51 ? GLY B 40 GLY B 50 B 6 ASP B 113 ? MSE B 114 ? ASP B 112 MSE B 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 27 ? N LYS A 26 O SER A 141 ? O SER A 140 A 2 3 N PHE A 140 ? N PHE A 139 O ALA A 147 ? O ALA A 146 A 3 4 O TYR A 148 ? O TYR A 147 N THR A 61 ? N THR A 60 A 4 5 O GLY A 56 ? O GLY A 55 N MSE A 49 ? N MSE A 48 A 5 6 N LEU A 46 ? N LEU A 45 O ILE A 118 ? O ILE A 117 A 6 7 N ALA A 128 ? N ALA A 127 O VAL B 119 ? O VAL B 118 A 7 8 O ILE B 118 ? O ILE B 117 N LEU B 46 ? N LEU B 45 A 8 9 N MSE B 49 ? N MSE B 48 O GLY B 56 ? O GLY B 55 A 9 10 N LYS B 55 ? N LYS B 54 O GLU B 154 ? O GLU B 153 A 10 11 O ALA B 147 ? O ALA B 146 N PHE B 140 ? N PHE B 139 A 11 12 O SER B 141 ? O SER B 140 N LYS B 27 ? N LYS B 26 B 1 2 O ASP A 113 ? O ASP A 112 N VAL A 50 ? N VAL A 49 B 2 3 N LEU A 46 ? N LEU A 45 O ILE A 118 ? O ILE A 117 B 3 4 N ALA A 128 ? N ALA A 127 O VAL B 119 ? O VAL B 118 B 4 5 O ILE B 118 ? O ILE B 117 N LEU B 46 ? N LEU B 45 B 5 6 N VAL B 50 ? N VAL B 49 O ASP B 113 ? O ASP B 112 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 155 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 155' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 20 ? THR A 19 . ? 1_555 ? 2 AC1 5 MSE A 21 ? MSE A 20 . ? 1_555 ? 3 AC1 5 ASN A 32 ? ASN A 31 . ? 3_745 ? 4 AC1 5 HOH D . ? HOH A 158 . ? 3_745 ? 5 AC1 5 HOH D . ? HOH A 167 . ? 1_555 ? # _atom_sites.entry_id 3IIC _atom_sites.fract_transf_matrix[1][1] 0.022912 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019203 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007439 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ASN 3 2 2 ASN ASN A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 ASP 5 4 4 ASP ASP A . n A 1 6 PHE 6 5 5 PHE PHE A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 ASN 8 7 7 ASN ASN A . n A 1 9 PRO 9 8 8 PRO PRO A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 SER 13 12 12 SER SER A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 ASN 16 15 15 ASN ASN A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 LYS 19 18 18 LYS LYS A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 MSE 21 20 20 MSE MSE A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 ASN 23 22 22 ASN ASN A . n A 1 24 MSE 24 23 23 MSE MSE A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 PRO 28 27 27 PRO PRO A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 ASN 32 31 31 ASN ASN A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 LYS 35 34 34 LYS LYS A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 ASN 37 36 36 ASN ASN A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 ASP 42 41 41 ASP ASP A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 MSE 49 48 48 MSE MSE A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 GLN 53 52 52 GLN GLN A . n A 1 54 THR 54 53 53 THR THR A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 SER 57 56 56 SER SER A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 THR 61 60 60 THR THR A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 MSE 71 70 70 MSE MSE A . n A 1 72 ASN 72 71 71 ASN ASN A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 MSE 74 73 73 MSE MSE A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 LYS 78 77 77 LYS LYS A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 GLU 84 83 83 GLU GLU A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 MSE 96 95 95 MSE MSE A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 THR 98 97 97 THR THR A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 ASN 103 102 102 ASN ASN A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 ASP 107 106 106 ASP ASP A . n A 1 108 LYS 108 107 107 LYS LYS A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 MSE 114 113 113 MSE MSE A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 PRO 117 116 116 PRO PRO A . n A 1 118 ILE 118 117 117 ILE ILE A . n A 1 119 VAL 119 118 118 VAL VAL A . n A 1 120 VAL 120 119 119 VAL VAL A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 ASN 124 123 123 ASN ASN A . n A 1 125 HIS 125 124 124 HIS HIS A . n A 1 126 THR 126 125 125 THR THR A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 HIS 129 128 128 HIS HIS A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 SER 131 130 130 SER SER A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 GLN 134 133 133 GLN GLN A . n A 1 135 LYS 135 134 134 LYS LYS A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 MSE 138 137 137 MSE MSE A . n A 1 139 PRO 139 138 138 PRO PRO A . n A 1 140 PHE 140 139 139 PHE PHE A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 TYR 144 143 143 TYR TYR A . n A 1 145 GLY 145 144 144 GLY GLY A . n A 1 146 THR 146 145 145 THR THR A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 ILE 151 150 150 ILE ILE A . n A 1 152 CYS 152 151 151 CYS CYS A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 GLY 155 154 154 GLY GLY A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 ASN 3 2 2 ASN ASN B . n B 1 4 VAL 4 3 3 VAL VAL B . n B 1 5 ASP 5 4 4 ASP ASP B . n B 1 6 PHE 6 5 5 PHE PHE B . n B 1 7 ILE 7 6 6 ILE ILE B . n B 1 8 ASN 8 7 7 ASN ASN B . n B 1 9 PRO 9 8 8 PRO PRO B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 LEU 11 10 10 LEU LEU B . n B 1 12 ASP 12 11 11 ASP ASP B . n B 1 13 SER 13 12 12 SER SER B . n B 1 14 LEU 14 13 13 LEU LEU B . n B 1 15 LEU 15 14 14 LEU LEU B . n B 1 16 ASN 16 15 15 ASN ASN B . n B 1 17 VAL 17 16 16 VAL VAL B . n B 1 18 LEU 18 17 17 LEU LEU B . n B 1 19 LYS 19 18 18 LYS LYS B . n B 1 20 THR 20 19 19 THR THR B . n B 1 21 MSE 21 20 20 MSE MSE B . n B 1 22 ALA 22 21 21 ALA ALA B . n B 1 23 ASN 23 22 22 ASN ASN B . n B 1 24 MSE 24 23 23 MSE MSE B . n B 1 25 GLU 25 24 24 GLU GLU B . n B 1 26 LEU 26 25 25 LEU LEU B . n B 1 27 LYS 27 26 26 LYS LYS B . n B 1 28 PRO 28 27 27 PRO PRO B . n B 1 29 GLY 29 28 28 GLY GLY B . n B 1 30 LYS 30 29 29 LYS LYS B . n B 1 31 PRO 31 30 30 PRO PRO B . n B 1 32 ASN 32 31 31 ASN ASN B . n B 1 33 LEU 33 32 32 LEU LEU B . n B 1 34 LYS 34 33 33 LYS LYS B . n B 1 35 LYS 35 34 34 LYS LYS B . n B 1 36 ASP 36 35 35 ASP ASP B . n B 1 37 ASN 37 36 36 ASN ASN B . n B 1 38 LEU 38 37 37 LEU LEU B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 LYS 40 39 39 LYS LYS B . n B 1 41 GLY 41 40 40 GLY GLY B . n B 1 42 ASP 42 41 41 ASP ASP B . n B 1 43 VAL 43 42 42 VAL VAL B . n B 1 44 SER 44 43 43 SER SER B . n B 1 45 GLY 45 44 44 GLY GLY B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 ILE 47 46 46 ILE ILE B . n B 1 48 GLY 48 47 47 GLY GLY B . n B 1 49 MSE 49 48 48 MSE MSE B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 GLY 51 50 50 GLY GLY B . n B 1 52 PRO 52 51 51 PRO PRO B . n B 1 53 GLN 53 52 52 GLN GLN B . n B 1 54 THR 54 53 53 THR THR B . n B 1 55 LYS 55 54 54 LYS LYS B . n B 1 56 GLY 56 55 55 GLY GLY B . n B 1 57 SER 57 56 56 SER SER B . n B 1 58 LEU 58 57 57 LEU LEU B . n B 1 59 SER 59 58 58 SER SER B . n B 1 60 ILE 60 59 59 ILE ILE B . n B 1 61 THR 61 60 60 THR THR B . n B 1 62 PHE 62 61 61 PHE PHE B . n B 1 63 GLU 63 62 62 GLU GLU B . n B 1 64 GLU 64 63 63 GLU GLU B . n B 1 65 THR 65 64 64 THR THR B . n B 1 66 LEU 66 65 65 LEU LEU B . n B 1 67 ILE 67 66 66 ILE ILE B . n B 1 68 LEU 68 67 67 LEU LEU B . n B 1 69 GLU 69 68 68 GLU GLU B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 MSE 71 70 70 MSE MSE B . n B 1 72 ASN 72 71 71 ASN ASN B . n B 1 73 LYS 73 72 72 LYS LYS B . n B 1 74 MSE 74 73 73 MSE MSE B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 GLY 76 75 75 GLY GLY B . n B 1 77 GLU 77 76 76 GLU GLU B . n B 1 78 LYS 78 77 77 LYS LYS B . n B 1 79 PRO 79 78 78 PRO PRO B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 SER 81 80 80 SER SER B . n B 1 82 ILE 82 81 81 ILE ILE B . n B 1 83 ASP 83 82 82 ASP ASP B . n B 1 84 GLU 84 83 83 GLU GLU B . n B 1 85 GLU 85 84 84 GLU GLU B . n B 1 86 VAL 86 85 85 VAL VAL B . n B 1 87 THR 87 86 86 THR THR B . n B 1 88 ASP 88 87 87 ASP ASP B . n B 1 89 LEU 89 88 88 LEU LEU B . n B 1 90 VAL 90 89 89 VAL VAL B . n B 1 91 GLY 91 90 90 GLY GLY B . n B 1 92 GLU 92 91 91 GLU GLU B . n B 1 93 LEU 93 92 92 LEU LEU B . n B 1 94 THR 94 93 93 THR THR B . n B 1 95 ASN 95 94 94 ASN ASN B . n B 1 96 MSE 96 95 95 MSE MSE B . n B 1 97 VAL 97 96 96 VAL VAL B . n B 1 98 THR 98 97 97 THR THR B . n B 1 99 GLY 99 98 98 GLY GLY B . n B 1 100 GLY 100 99 99 GLY GLY B . n B 1 101 ALA 101 100 100 ALA ALA B . n B 1 102 LYS 102 101 101 LYS LYS B . n B 1 103 ASN 103 102 102 ASN ASN B . n B 1 104 LEU 104 103 103 LEU LEU B . n B 1 105 LEU 105 104 104 LEU LEU B . n B 1 106 SER 106 105 105 SER SER B . n B 1 107 ASP 107 106 106 ASP ASP B . n B 1 108 LYS 108 107 107 LYS LYS B . n B 1 109 GLY 109 108 108 GLY GLY B . n B 1 110 TYR 110 109 109 TYR TYR B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 PHE 112 111 111 PHE PHE B . n B 1 113 ASP 113 112 112 ASP ASP B . n B 1 114 MSE 114 113 113 MSE MSE B . n B 1 115 ALA 115 114 114 ALA ALA B . n B 1 116 THR 116 115 115 THR THR B . n B 1 117 PRO 117 116 116 PRO PRO B . n B 1 118 ILE 118 117 117 ILE ILE B . n B 1 119 VAL 119 118 118 VAL VAL B . n B 1 120 VAL 120 119 119 VAL VAL B . n B 1 121 SER 121 120 120 SER SER B . n B 1 122 GLY 122 121 121 GLY GLY B . n B 1 123 LYS 123 122 122 LYS LYS B . n B 1 124 ASN 124 123 123 ASN ASN B . n B 1 125 HIS 125 124 124 HIS HIS B . n B 1 126 THR 126 125 125 THR THR B . n B 1 127 ILE 127 126 126 ILE ILE B . n B 1 128 ALA 128 127 127 ALA ALA B . n B 1 129 HIS 129 128 128 HIS HIS B . n B 1 130 LYS 130 129 129 LYS LYS B . n B 1 131 SER 131 130 130 SER SER B . n B 1 132 ASP 132 131 131 ASP ASP B . n B 1 133 GLY 133 132 132 GLY GLY B . n B 1 134 GLN 134 133 133 GLN GLN B . n B 1 135 LYS 135 134 134 LYS LYS B . n B 1 136 ILE 136 135 135 ILE ILE B . n B 1 137 ILE 137 136 136 ILE ILE B . n B 1 138 MSE 138 137 137 MSE MSE B . n B 1 139 PRO 139 138 138 PRO PRO B . n B 1 140 PHE 140 139 139 PHE PHE B . n B 1 141 SER 141 140 140 SER SER B . n B 1 142 SER 142 141 141 SER SER B . n B 1 143 ILE 143 142 142 ILE ILE B . n B 1 144 TYR 144 143 143 TYR TYR B . n B 1 145 GLY 145 144 144 GLY GLY B . n B 1 146 THR 146 145 145 THR THR B . n B 1 147 ALA 147 146 146 ALA ALA B . n B 1 148 TYR 148 147 147 TYR TYR B . n B 1 149 ILE 149 148 148 ILE ILE B . n B 1 150 GLU 150 149 149 GLU GLU B . n B 1 151 ILE 151 150 150 ILE ILE B . n B 1 152 CYS 152 151 151 CYS CYS B . n B 1 153 PHE 153 152 152 PHE PHE B . n B 1 154 GLU 154 153 153 GLU GLU B . n B 1 155 GLY 155 154 154 GLY GLY B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 155 1 EDO EDO A . D 3 HOH 1 156 2 HOH HOH A . D 3 HOH 2 157 3 HOH HOH A . D 3 HOH 3 158 5 HOH HOH A . D 3 HOH 4 159 7 HOH HOH A . D 3 HOH 5 160 8 HOH HOH A . D 3 HOH 6 161 11 HOH HOH A . D 3 HOH 7 162 12 HOH HOH A . D 3 HOH 8 163 15 HOH HOH A . D 3 HOH 9 164 16 HOH HOH A . D 3 HOH 10 165 18 HOH HOH A . D 3 HOH 11 166 20 HOH HOH A . D 3 HOH 12 167 21 HOH HOH A . D 3 HOH 13 168 22 HOH HOH A . D 3 HOH 14 169 23 HOH HOH A . D 3 HOH 15 170 24 HOH HOH A . D 3 HOH 16 171 25 HOH HOH A . D 3 HOH 17 172 26 HOH HOH A . D 3 HOH 18 173 28 HOH HOH A . D 3 HOH 19 174 30 HOH HOH A . D 3 HOH 20 175 34 HOH HOH A . D 3 HOH 21 176 36 HOH HOH A . D 3 HOH 22 177 40 HOH HOH A . D 3 HOH 23 178 41 HOH HOH A . D 3 HOH 24 179 42 HOH HOH A . E 3 HOH 1 155 4 HOH HOH B . E 3 HOH 2 156 6 HOH HOH B . E 3 HOH 3 157 10 HOH HOH B . E 3 HOH 4 158 13 HOH HOH B . E 3 HOH 5 159 14 HOH HOH B . E 3 HOH 6 160 17 HOH HOH B . E 3 HOH 7 161 19 HOH HOH B . E 3 HOH 8 162 29 HOH HOH B . E 3 HOH 9 163 31 HOH HOH B . E 3 HOH 10 164 32 HOH HOH B . E 3 HOH 11 165 33 HOH HOH B . E 3 HOH 12 166 35 HOH HOH B . E 3 HOH 13 167 37 HOH HOH B . E 3 HOH 14 168 38 HOH HOH B . E 3 HOH 15 169 43 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 21 A MSE 20 ? MET SELENOMETHIONINE 3 A MSE 24 A MSE 23 ? MET SELENOMETHIONINE 4 A MSE 49 A MSE 48 ? MET SELENOMETHIONINE 5 A MSE 71 A MSE 70 ? MET SELENOMETHIONINE 6 A MSE 74 A MSE 73 ? MET SELENOMETHIONINE 7 A MSE 96 A MSE 95 ? MET SELENOMETHIONINE 8 A MSE 114 A MSE 113 ? MET SELENOMETHIONINE 9 A MSE 138 A MSE 137 ? MET SELENOMETHIONINE 10 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 11 B MSE 21 B MSE 20 ? MET SELENOMETHIONINE 12 B MSE 24 B MSE 23 ? MET SELENOMETHIONINE 13 B MSE 49 B MSE 48 ? MET SELENOMETHIONINE 14 B MSE 71 B MSE 70 ? MET SELENOMETHIONINE 15 B MSE 74 B MSE 73 ? MET SELENOMETHIONINE 16 B MSE 96 B MSE 95 ? MET SELENOMETHIONINE 17 B MSE 114 B MSE 113 ? MET SELENOMETHIONINE 18 B MSE 138 B MSE 137 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2620 ? 1 MORE -13 ? 1 'SSA (A^2)' 13260 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 44.7284 28.2646 39.4935 0.0289 0.0587 0.0685 -0.0069 0.0177 0.0323 1.1125 4.5447 3.7096 -0.2056 -0.3620 1.6175 0.0459 0.0025 -0.0484 -0.0128 -0.0871 -0.3775 -0.2554 -0.2976 0.1931 'X-RAY DIFFRACTION' 2 ? refined 34.7965 27.6003 60.0859 0.2143 0.1347 0.0927 -0.0353 0.0498 0.0402 3.3877 3.7033 4.0127 -1.1392 -0.6997 0.4368 -0.0333 -0.0342 0.0675 -0.2336 -0.2591 0.3199 0.7718 0.4400 -0.0921 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 154 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 154 ? . . . . ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_entry_details.entry_id 3IIC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 35 ? ? -115.51 -168.97 2 1 GLU A 79 ? ? 75.15 -44.56 3 1 ASP A 82 ? ? -115.52 -169.12 4 1 LYS B 33 ? ? -155.43 28.90 5 1 LYS B 34 ? ? -179.40 121.85 6 1 GLU B 79 ? ? 81.21 -49.31 7 1 ASP B 82 ? ? -122.07 -168.32 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 18 ? CE ? A LYS 19 CE 2 1 Y 1 A LYS 18 ? NZ ? A LYS 19 NZ 3 1 Y 1 A LYS 26 ? NZ ? A LYS 27 NZ 4 1 Y 1 A GLN 52 ? CG ? A GLN 53 CG 5 1 Y 1 A GLN 52 ? CD ? A GLN 53 CD 6 1 Y 1 A GLN 52 ? OE1 ? A GLN 53 OE1 7 1 Y 1 A GLN 52 ? NE2 ? A GLN 53 NE2 8 1 Y 1 A LYS 77 ? CE ? A LYS 78 CE 9 1 Y 1 A LYS 77 ? NZ ? A LYS 78 NZ 10 1 Y 1 A LYS 122 ? CD ? A LYS 123 CD 11 1 Y 1 A LYS 122 ? CE ? A LYS 123 CE 12 1 Y 1 A LYS 122 ? NZ ? A LYS 123 NZ 13 1 Y 1 A GLN 133 ? CG ? A GLN 134 CG 14 1 Y 1 A GLN 133 ? CD ? A GLN 134 CD 15 1 Y 1 A GLN 133 ? OE1 ? A GLN 134 OE1 16 1 Y 1 A GLN 133 ? NE2 ? A GLN 134 NE2 17 1 Y 1 B LYS 18 ? CG ? B LYS 19 CG 18 1 Y 1 B LYS 18 ? CD ? B LYS 19 CD 19 1 Y 1 B LYS 18 ? CE ? B LYS 19 CE 20 1 Y 1 B LYS 18 ? NZ ? B LYS 19 NZ 21 1 Y 1 B GLU 24 ? CG ? B GLU 25 CG 22 1 Y 1 B GLU 24 ? CD ? B GLU 25 CD 23 1 Y 1 B GLU 24 ? OE1 ? B GLU 25 OE1 24 1 Y 1 B GLU 24 ? OE2 ? B GLU 25 OE2 25 1 Y 1 B LYS 29 ? CD ? B LYS 30 CD 26 1 Y 1 B LYS 29 ? CE ? B LYS 30 CE 27 1 Y 1 B LYS 29 ? NZ ? B LYS 30 NZ 28 1 Y 1 B LEU 32 ? CG ? B LEU 33 CG 29 1 Y 1 B LEU 32 ? CD1 ? B LEU 33 CD1 30 1 Y 1 B LEU 32 ? CD2 ? B LEU 33 CD2 31 1 Y 1 B LYS 33 ? CG ? B LYS 34 CG 32 1 Y 1 B LYS 33 ? CD ? B LYS 34 CD 33 1 Y 1 B LYS 33 ? CE ? B LYS 34 CE 34 1 Y 1 B LYS 33 ? NZ ? B LYS 34 NZ 35 1 Y 1 B LYS 34 ? CG ? B LYS 35 CG 36 1 Y 1 B LYS 34 ? CD ? B LYS 35 CD 37 1 Y 1 B LYS 34 ? CE ? B LYS 35 CE 38 1 Y 1 B LYS 34 ? NZ ? B LYS 35 NZ 39 1 Y 1 B LYS 72 ? CE ? B LYS 73 CE 40 1 Y 1 B LYS 72 ? NZ ? B LYS 73 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #