HEADER SPLICING 31-AUG-09 3IUG TITLE CRYSTAL STRUCTURE OF THE RHOGAP DOMAIN OF RICS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO/CDC42/RAC GTPASE-ACTIVATING PROTEIN RICS; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RHO-GAP DOMAIN: UNP RESIDUES 367-577; COMPND 5 SYNONYM: P200RHOGAP, P250GAP, RHOGAP INVOLVED IN THE BETA-CATENIN-N- COMPND 6 CADHERIN AND NMDA RECEPTOR SIGNALING, BRAIN-SPECIFIC RHO GTPASE- COMPND 7 ACTIVATING PROTEIN, GAB-ASSOCIATED CDC42/RAC GTPASE-ACTIVATING COMPND 8 PROTEIN, GC-GAP, GTPASE REGULATOR INTERACTING WITH TRKA; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GI:134105571, GRIT, KIAA0712, RICS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS STRUCTURAL GENOMICS CONSORTIUM (SGC), GAP, ALTERNATIVE SPLICING, CELL KEYWDS 2 JUNCTION, CELL MEMBRANE, CELL PROJECTION, CYTOPLASM, ENDOPLASMIC KEYWDS 3 RETICULUM, ENDOSOME, GOLGI APPARATUS, GTPASE ACTIVATION, MEMBRANE, KEYWDS 4 PHOSPHOPROTEIN, POSTSYNAPTIC CELL MEMBRANE, SH3 DOMAIN, SYNAPSE, KEYWDS 5 SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR L.NEDYALKOVA,W.TEMPEL,Y.TONG,Y.LI,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 2 C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 3 06-SEP-23 3IUG 1 SEQADV REVDAT 2 01-NOV-17 3IUG 1 REMARK REVDAT 1 29-SEP-09 3IUG 0 JRNL AUTH L.NEDYALKOVA,W.TEMPEL,Y.TONG,Y.LI,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,C.BOUNTRA,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL CRYSTAL STRUCTURE OF THE RHOGAP DOMAIN OF RICS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 45184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS (SFTOOLS) REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.273 REMARK 3 FREE R VALUE TEST SET COUNT : 1027 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3183 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.3620 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2919 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 308 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73400 REMARK 3 B22 (A**2) : -1.45700 REMARK 3 B33 (A**2) : 0.72300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.220 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3079 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2028 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4216 ; 1.563 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4972 ; 1.004 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 396 ; 5.187 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;33.357 ;23.819 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 504 ;12.667 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.179 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 490 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3443 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 633 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1893 ; 1.048 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 751 ; 0.287 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3081 ; 1.838 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1186 ; 2.700 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1120 ; 4.300 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: REFINED INDIVIDUALLY. REMARK 4 REMARK 4 3IUG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000054878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45281 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.70200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2OSA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 5000 MME, 0.2M AMMONIUM REMARK 280 SULFATE, 0.1M MES, 1:100 W/W SUBTILISIN, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 51.13200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.68450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.13200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.68450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT WAS NOT DETERMINED. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 SER A 356 REMARK 465 SER A 357 REMARK 465 GLY A 358 REMARK 465 ARG A 359 REMARK 465 GLU A 360 REMARK 465 ASN A 361 REMARK 465 LEU A 362 REMARK 465 TYR A 363 REMARK 465 PHE A 364 REMARK 465 GLN A 365 REMARK 465 LYS A 533 REMARK 465 GLN A 534 REMARK 465 ILE A 535 REMARK 465 GLU A 536 REMARK 465 SER A 537 REMARK 465 ALA A 538 REMARK 465 CYS A 539 REMARK 465 PHE A 540 REMARK 465 SER A 541 REMARK 465 GLY A 542 REMARK 465 THR A 543 REMARK 465 ALA A 544 REMARK 465 ALA A 545 REMARK 465 PHE A 546 REMARK 465 MET A 547 REMARK 465 GLU A 548 REMARK 465 VAL A 549 REMARK 465 ARG A 550 REMARK 465 ILE A 551 REMARK 465 GLY A 569 REMARK 465 ARG A 570 REMARK 465 ILE A 571 REMARK 465 SER A 572 REMARK 465 MET A 573 REMARK 465 ALA A 574 REMARK 465 MET A 575 REMARK 465 GLN A 576 REMARK 465 GLU A 577 REMARK 465 MET B 349 REMARK 465 HIS B 350 REMARK 465 HIS B 351 REMARK 465 HIS B 352 REMARK 465 HIS B 353 REMARK 465 HIS B 354 REMARK 465 HIS B 355 REMARK 465 SER B 356 REMARK 465 SER B 357 REMARK 465 GLY B 358 REMARK 465 ARG B 359 REMARK 465 GLU B 360 REMARK 465 ASN B 361 REMARK 465 LEU B 362 REMARK 465 TYR B 363 REMARK 465 PHE B 364 REMARK 465 GLN B 365 REMARK 465 GLY B 366 REMARK 465 GLU B 367 REMARK 465 LYS B 533 REMARK 465 GLN B 534 REMARK 465 ILE B 535 REMARK 465 GLU B 536 REMARK 465 SER B 537 REMARK 465 ALA B 538 REMARK 465 CYS B 539 REMARK 465 PHE B 540 REMARK 465 SER B 541 REMARK 465 GLY B 542 REMARK 465 THR B 543 REMARK 465 ALA B 544 REMARK 465 ALA B 545 REMARK 465 PHE B 546 REMARK 465 MET B 547 REMARK 465 GLU B 548 REMARK 465 ARG B 570 REMARK 465 ILE B 571 REMARK 465 SER B 572 REMARK 465 MET B 573 REMARK 465 ALA B 574 REMARK 465 MET B 575 REMARK 465 GLN B 576 REMARK 465 GLU B 577 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 417 NE CZ NH1 NH2 REMARK 470 LYS A 432 CG CD CE NZ REMARK 470 GLU A 433 CG CD OE1 OE2 REMARK 470 GLN A 437 CG CD OE1 NE2 REMARK 470 ARG A 451 NE CZ NH1 NH2 REMARK 470 GLN A 552 CD OE1 NE2 REMARK 470 ARG B 368 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 417 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 425 CG CD OE1 OE2 REMARK 470 HIS B 426 CG ND1 CD2 CE1 NE2 REMARK 470 VAL B 427 CG1 CG2 REMARK 470 LYS B 432 CG CD CE NZ REMARK 470 GLN B 461 CG CD OE1 NE2 REMARK 470 VAL B 549 CG1 CG2 REMARK 470 ARG B 550 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 551 CG1 CG2 CD1 REMARK 470 GLN B 552 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 407 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 406 -13.51 69.14 REMARK 500 THR A 459 146.18 80.89 REMARK 500 TYR B 406 -9.69 67.65 REMARK 500 ASP B 438 75.06 -113.84 REMARK 500 THR B 459 145.30 77.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 3IUG A 367 577 UNP A7KAX9 RICS_HUMAN 367 577 DBREF 3IUG B 367 577 UNP A7KAX9 RICS_HUMAN 367 577 SEQADV 3IUG MET A 349 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 350 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 351 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 352 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 353 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 354 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS A 355 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG SER A 356 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG SER A 357 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLY A 358 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG ARG A 359 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLU A 360 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG ASN A 361 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG LEU A 362 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG TYR A 363 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG PHE A 364 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLN A 365 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLY A 366 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG MET B 349 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 350 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 351 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 352 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 353 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 354 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG HIS B 355 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG SER B 356 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG SER B 357 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLY B 358 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG ARG B 359 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLU B 360 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG ASN B 361 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG LEU B 362 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG TYR B 363 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG PHE B 364 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLN B 365 UNP A7KAX9 EXPRESSION TAG SEQADV 3IUG GLY B 366 UNP A7KAX9 EXPRESSION TAG SEQRES 1 A 229 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 229 LEU TYR PHE GLN GLY GLU ARG VAL PHE GLY CYS ASP LEU SEQRES 3 A 229 GLY GLU HIS LEU LEU ASN SER GLY PHE GLU VAL PRO GLN SEQRES 4 A 229 VAL LEU GLN SER CYS THR ALA PHE ILE GLU ARG TYR GLY SEQRES 5 A 229 ILE VAL ASP GLY ILE TYR ARG LEU SER GLY VAL ALA SER SEQRES 6 A 229 ASN ILE GLN ARG LEU ARG HIS GLU PHE ASP SER GLU HIS SEQRES 7 A 229 VAL PRO ASP LEU THR LYS GLU PRO TYR VAL GLN ASP ILE SEQRES 8 A 229 HIS SER VAL GLY SER LEU CYS LYS LEU TYR PHE ARG GLU SEQRES 9 A 229 LEU PRO ASN PRO LEU LEU THR TYR GLN LEU TYR GLU LYS SEQRES 10 A 229 PHE SER ASP ALA VAL SER ALA ALA THR ASP GLU GLU ARG SEQRES 11 A 229 LEU ILE LYS ILE HIS ASP VAL ILE GLN GLN LEU PRO PRO SEQRES 12 A 229 PRO HIS TYR ARG THR LEU GLU PHE LEU MET ARG HIS LEU SEQRES 13 A 229 SER LEU LEU ALA ASP TYR CYS SER ILE THR ASN MET HIS SEQRES 14 A 229 ALA LYS ASN LEU ALA ILE VAL TRP ALA PRO ASN LEU LEU SEQRES 15 A 229 ARG SER LYS GLN ILE GLU SER ALA CYS PHE SER GLY THR SEQRES 16 A 229 ALA ALA PHE MET GLU VAL ARG ILE GLN SER VAL VAL VAL SEQRES 17 A 229 GLU PHE ILE LEU ASN HIS VAL ASP VAL LEU PHE SER GLY SEQRES 18 A 229 ARG ILE SER MET ALA MET GLN GLU SEQRES 1 B 229 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 229 LEU TYR PHE GLN GLY GLU ARG VAL PHE GLY CYS ASP LEU SEQRES 3 B 229 GLY GLU HIS LEU LEU ASN SER GLY PHE GLU VAL PRO GLN SEQRES 4 B 229 VAL LEU GLN SER CYS THR ALA PHE ILE GLU ARG TYR GLY SEQRES 5 B 229 ILE VAL ASP GLY ILE TYR ARG LEU SER GLY VAL ALA SER SEQRES 6 B 229 ASN ILE GLN ARG LEU ARG HIS GLU PHE ASP SER GLU HIS SEQRES 7 B 229 VAL PRO ASP LEU THR LYS GLU PRO TYR VAL GLN ASP ILE SEQRES 8 B 229 HIS SER VAL GLY SER LEU CYS LYS LEU TYR PHE ARG GLU SEQRES 9 B 229 LEU PRO ASN PRO LEU LEU THR TYR GLN LEU TYR GLU LYS SEQRES 10 B 229 PHE SER ASP ALA VAL SER ALA ALA THR ASP GLU GLU ARG SEQRES 11 B 229 LEU ILE LYS ILE HIS ASP VAL ILE GLN GLN LEU PRO PRO SEQRES 12 B 229 PRO HIS TYR ARG THR LEU GLU PHE LEU MET ARG HIS LEU SEQRES 13 B 229 SER LEU LEU ALA ASP TYR CYS SER ILE THR ASN MET HIS SEQRES 14 B 229 ALA LYS ASN LEU ALA ILE VAL TRP ALA PRO ASN LEU LEU SEQRES 15 B 229 ARG SER LYS GLN ILE GLU SER ALA CYS PHE SER GLY THR SEQRES 16 B 229 ALA ALA PHE MET GLU VAL ARG ILE GLN SER VAL VAL VAL SEQRES 17 B 229 GLU PHE ILE LEU ASN HIS VAL ASP VAL LEU PHE SER GLY SEQRES 18 B 229 ARG ILE SER MET ALA MET GLN GLU HET UNX A 6 1 HET UNX A 8 1 HET UNX B 1 1 HET UNX B 2 1 HET UNX B 3 1 HET UNX B 4 1 HET UNX B 5 1 HET UNX B 7 1 HET UNX B 9 1 HET UNX B 10 1 HET UNX B 11 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 3 UNX 11(X) FORMUL 14 HOH *308(H2 O) HELIX 1 1 ASP A 373 GLY A 382 1 10 HELIX 2 2 PRO A 386 GLY A 400 1 15 HELIX 3 3 VAL A 411 SER A 424 1 14 HELIX 4 4 ASP A 438 LEU A 453 1 16 HELIX 5 5 LEU A 462 SER A 471 1 10 HELIX 6 6 THR A 474 GLN A 487 1 14 HELIX 7 7 PRO A 490 ASP A 509 1 20 HELIX 8 8 TYR A 510 ASN A 515 1 6 HELIX 9 9 HIS A 517 LEU A 530 1 14 HELIX 10 10 GLN A 552 HIS A 562 1 11 HELIX 11 11 HIS A 562 PHE A 567 1 6 HELIX 12 12 ASP B 373 GLY B 382 1 10 HELIX 13 13 PRO B 386 GLY B 400 1 15 HELIX 14 14 VAL B 411 SER B 424 1 14 HELIX 15 15 ASP B 438 LEU B 453 1 16 HELIX 16 16 LEU B 462 SER B 471 1 10 HELIX 17 17 THR B 474 GLN B 487 1 14 HELIX 18 18 PRO B 490 TYR B 510 1 21 HELIX 19 19 TYR B 510 ASN B 515 1 6 HELIX 20 20 HIS B 517 LEU B 530 1 14 HELIX 21 21 VAL B 549 HIS B 562 1 14 HELIX 22 22 HIS B 562 PHE B 567 1 6 CISPEP 1 GLU A 433 PRO A 434 0 -0.80 CISPEP 2 GLU B 433 PRO B 434 0 -1.86 CRYST1 102.264 117.369 37.717 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008520 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026513 0.00000