data_3J1R # _entry.id 3J1R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3J1R pdb_00003j1r 10.2210/pdb3j1r/pdb RCSB RCSB160141 ? ? WWPDB D_1000160141 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-20 2 'Structure model' 1 1 2012-08-29 3 'Structure model' 1 2 2018-07-18 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' em_single_particle_entity 2 3 'Structure model' em_software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.image_processing_id' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J1R _pdbx_database_status.recvd_initial_deposition_date 2012-05-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-5423 _pdbx_database_related.content_type 'associated EM volume' _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yu, X.' 1 'Goforth, C.' 2 'Meyer, C.' 3 'Rachel, R.' 4 'Wirth, R.' 5 'Schroeder, G.F.' 6 'Egelman, E.H.' 7 # _citation.id primary _citation.title 'Filaments from Ignicoccus hospitalis Show Diversity of Packing in Proteins Containing N-Terminal Type IV Pilin Helices.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 422 _citation.page_first 274 _citation.page_last 281 _citation.year 2012 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22659006 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2012.05.031 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, X.' 1 ? primary 'Goforth, C.' 2 ? primary 'Meyer, C.' 3 ? primary 'Rachel, R.' 4 ? primary 'Wirth, R.' 5 ? primary 'Schroder, G.F.' 6 ? primary 'Egelman, E.H.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'archaeal adhesion filament core' _entity.formula_weight 2710.340 _entity.pdbx_number_of_molecules 21 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SEE REMARK 999' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VSPVIATLLLILIAVAAAVLLYTWVS _entity_poly.pdbx_seq_one_letter_code_can VSPVIATLLLILIAVAAAVLLYTWVS _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 SER n 1 3 PRO n 1 4 VAL n 1 5 ILE n 1 6 ALA n 1 7 THR n 1 8 LEU n 1 9 LEU n 1 10 LEU n 1 11 ILE n 1 12 LEU n 1 13 ILE n 1 14 ALA n 1 15 VAL n 1 16 ALA n 1 17 ALA n 1 18 ALA n 1 19 VAL n 1 20 LEU n 1 21 LEU n 1 22 TYR n 1 23 THR n 1 24 TRP n 1 25 VAL n 1 26 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Ignicoccus hospitalis' _entity_src_nat.pdbx_ncbi_taxonomy_id 160233 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 8 8 VAL VAL A . n A 1 2 SER 2 9 9 SER SER A . n A 1 3 PRO 3 10 10 PRO PRO A . n A 1 4 VAL 4 11 11 VAL VAL A . n A 1 5 ILE 5 12 12 ILE ILE A . n A 1 6 ALA 6 13 13 ALA ALA A . n A 1 7 THR 7 14 14 THR THR A . n A 1 8 LEU 8 15 15 LEU LEU A . n A 1 9 LEU 9 16 16 LEU LEU A . n A 1 10 LEU 10 17 17 LEU LEU A . n A 1 11 ILE 11 18 18 ILE ILE A . n A 1 12 LEU 12 19 19 LEU LEU A . n A 1 13 ILE 13 20 20 ILE ILE A . n A 1 14 ALA 14 21 21 ALA ALA A . n A 1 15 VAL 15 22 22 VAL VAL A . n A 1 16 ALA 16 23 23 ALA ALA A . n A 1 17 ALA 17 24 24 ALA ALA A . n A 1 18 ALA 18 25 25 ALA ALA A . n A 1 19 VAL 19 26 26 VAL VAL A . n A 1 20 LEU 20 27 27 LEU LEU A . n A 1 21 LEU 21 28 28 LEU LEU A . n A 1 22 TYR 22 29 29 TYR TYR A . n A 1 23 THR 23 30 30 THR THR A . n A 1 24 TRP 24 31 31 TRP TRP A . n A 1 25 VAL 25 32 32 VAL VAL A . n A 1 26 SER 26 33 33 SER SER A . n B 1 1 VAL 1 8 8 VAL VAL B . n B 1 2 SER 2 9 9 SER SER B . n B 1 3 PRO 3 10 10 PRO PRO B . n B 1 4 VAL 4 11 11 VAL VAL B . n B 1 5 ILE 5 12 12 ILE ILE B . n B 1 6 ALA 6 13 13 ALA ALA B . n B 1 7 THR 7 14 14 THR THR B . n B 1 8 LEU 8 15 15 LEU LEU B . n B 1 9 LEU 9 16 16 LEU LEU B . n B 1 10 LEU 10 17 17 LEU LEU B . n B 1 11 ILE 11 18 18 ILE ILE B . n B 1 12 LEU 12 19 19 LEU LEU B . n B 1 13 ILE 13 20 20 ILE ILE B . n B 1 14 ALA 14 21 21 ALA ALA B . n B 1 15 VAL 15 22 22 VAL VAL B . n B 1 16 ALA 16 23 23 ALA ALA B . n B 1 17 ALA 17 24 24 ALA ALA B . n B 1 18 ALA 18 25 25 ALA ALA B . n B 1 19 VAL 19 26 26 VAL VAL B . n B 1 20 LEU 20 27 27 LEU LEU B . n B 1 21 LEU 21 28 28 LEU LEU B . n B 1 22 TYR 22 29 29 TYR TYR B . n B 1 23 THR 23 30 30 THR THR B . n B 1 24 TRP 24 31 31 TRP TRP B . n B 1 25 VAL 25 32 32 VAL VAL B . n B 1 26 SER 26 33 33 SER SER B . n C 1 1 VAL 1 8 8 VAL VAL C . n C 1 2 SER 2 9 9 SER SER C . n C 1 3 PRO 3 10 10 PRO PRO C . n C 1 4 VAL 4 11 11 VAL VAL C . n C 1 5 ILE 5 12 12 ILE ILE C . n C 1 6 ALA 6 13 13 ALA ALA C . n C 1 7 THR 7 14 14 THR THR C . n C 1 8 LEU 8 15 15 LEU LEU C . n C 1 9 LEU 9 16 16 LEU LEU C . n C 1 10 LEU 10 17 17 LEU LEU C . n C 1 11 ILE 11 18 18 ILE ILE C . n C 1 12 LEU 12 19 19 LEU LEU C . n C 1 13 ILE 13 20 20 ILE ILE C . n C 1 14 ALA 14 21 21 ALA ALA C . n C 1 15 VAL 15 22 22 VAL VAL C . n C 1 16 ALA 16 23 23 ALA ALA C . n C 1 17 ALA 17 24 24 ALA ALA C . n C 1 18 ALA 18 25 25 ALA ALA C . n C 1 19 VAL 19 26 26 VAL VAL C . n C 1 20 LEU 20 27 27 LEU LEU C . n C 1 21 LEU 21 28 28 LEU LEU C . n C 1 22 TYR 22 29 29 TYR TYR C . n C 1 23 THR 23 30 30 THR THR C . n C 1 24 TRP 24 31 31 TRP TRP C . n C 1 25 VAL 25 32 32 VAL VAL C . n C 1 26 SER 26 33 33 SER SER C . n D 1 1 VAL 1 8 8 VAL VAL D . n D 1 2 SER 2 9 9 SER SER D . n D 1 3 PRO 3 10 10 PRO PRO D . n D 1 4 VAL 4 11 11 VAL VAL D . n D 1 5 ILE 5 12 12 ILE ILE D . n D 1 6 ALA 6 13 13 ALA ALA D . n D 1 7 THR 7 14 14 THR THR D . n D 1 8 LEU 8 15 15 LEU LEU D . n D 1 9 LEU 9 16 16 LEU LEU D . n D 1 10 LEU 10 17 17 LEU LEU D . n D 1 11 ILE 11 18 18 ILE ILE D . n D 1 12 LEU 12 19 19 LEU LEU D . n D 1 13 ILE 13 20 20 ILE ILE D . n D 1 14 ALA 14 21 21 ALA ALA D . n D 1 15 VAL 15 22 22 VAL VAL D . n D 1 16 ALA 16 23 23 ALA ALA D . n D 1 17 ALA 17 24 24 ALA ALA D . n D 1 18 ALA 18 25 25 ALA ALA D . n D 1 19 VAL 19 26 26 VAL VAL D . n D 1 20 LEU 20 27 27 LEU LEU D . n D 1 21 LEU 21 28 28 LEU LEU D . n D 1 22 TYR 22 29 29 TYR TYR D . n D 1 23 THR 23 30 30 THR THR D . n D 1 24 TRP 24 31 31 TRP TRP D . n D 1 25 VAL 25 32 32 VAL VAL D . n D 1 26 SER 26 33 33 SER SER D . n E 1 1 VAL 1 8 8 VAL VAL E . n E 1 2 SER 2 9 9 SER SER E . n E 1 3 PRO 3 10 10 PRO PRO E . n E 1 4 VAL 4 11 11 VAL VAL E . n E 1 5 ILE 5 12 12 ILE ILE E . n E 1 6 ALA 6 13 13 ALA ALA E . n E 1 7 THR 7 14 14 THR THR E . n E 1 8 LEU 8 15 15 LEU LEU E . n E 1 9 LEU 9 16 16 LEU LEU E . n E 1 10 LEU 10 17 17 LEU LEU E . n E 1 11 ILE 11 18 18 ILE ILE E . n E 1 12 LEU 12 19 19 LEU LEU E . n E 1 13 ILE 13 20 20 ILE ILE E . n E 1 14 ALA 14 21 21 ALA ALA E . n E 1 15 VAL 15 22 22 VAL VAL E . n E 1 16 ALA 16 23 23 ALA ALA E . n E 1 17 ALA 17 24 24 ALA ALA E . n E 1 18 ALA 18 25 25 ALA ALA E . n E 1 19 VAL 19 26 26 VAL VAL E . n E 1 20 LEU 20 27 27 LEU LEU E . n E 1 21 LEU 21 28 28 LEU LEU E . n E 1 22 TYR 22 29 29 TYR TYR E . n E 1 23 THR 23 30 30 THR THR E . n E 1 24 TRP 24 31 31 TRP TRP E . n E 1 25 VAL 25 32 32 VAL VAL E . n E 1 26 SER 26 33 33 SER SER E . n F 1 1 VAL 1 8 8 VAL VAL F . n F 1 2 SER 2 9 9 SER SER F . n F 1 3 PRO 3 10 10 PRO PRO F . n F 1 4 VAL 4 11 11 VAL VAL F . n F 1 5 ILE 5 12 12 ILE ILE F . n F 1 6 ALA 6 13 13 ALA ALA F . n F 1 7 THR 7 14 14 THR THR F . n F 1 8 LEU 8 15 15 LEU LEU F . n F 1 9 LEU 9 16 16 LEU LEU F . n F 1 10 LEU 10 17 17 LEU LEU F . n F 1 11 ILE 11 18 18 ILE ILE F . n F 1 12 LEU 12 19 19 LEU LEU F . n F 1 13 ILE 13 20 20 ILE ILE F . n F 1 14 ALA 14 21 21 ALA ALA F . n F 1 15 VAL 15 22 22 VAL VAL F . n F 1 16 ALA 16 23 23 ALA ALA F . n F 1 17 ALA 17 24 24 ALA ALA F . n F 1 18 ALA 18 25 25 ALA ALA F . n F 1 19 VAL 19 26 26 VAL VAL F . n F 1 20 LEU 20 27 27 LEU LEU F . n F 1 21 LEU 21 28 28 LEU LEU F . n F 1 22 TYR 22 29 29 TYR TYR F . n F 1 23 THR 23 30 30 THR THR F . n F 1 24 TRP 24 31 31 TRP TRP F . n F 1 25 VAL 25 32 32 VAL VAL F . n F 1 26 SER 26 33 33 SER SER F . n G 1 1 VAL 1 8 8 VAL VAL G . n G 1 2 SER 2 9 9 SER SER G . n G 1 3 PRO 3 10 10 PRO PRO G . n G 1 4 VAL 4 11 11 VAL VAL G . n G 1 5 ILE 5 12 12 ILE ILE G . n G 1 6 ALA 6 13 13 ALA ALA G . n G 1 7 THR 7 14 14 THR THR G . n G 1 8 LEU 8 15 15 LEU LEU G . n G 1 9 LEU 9 16 16 LEU LEU G . n G 1 10 LEU 10 17 17 LEU LEU G . n G 1 11 ILE 11 18 18 ILE ILE G . n G 1 12 LEU 12 19 19 LEU LEU G . n G 1 13 ILE 13 20 20 ILE ILE G . n G 1 14 ALA 14 21 21 ALA ALA G . n G 1 15 VAL 15 22 22 VAL VAL G . n G 1 16 ALA 16 23 23 ALA ALA G . n G 1 17 ALA 17 24 24 ALA ALA G . n G 1 18 ALA 18 25 25 ALA ALA G . n G 1 19 VAL 19 26 26 VAL VAL G . n G 1 20 LEU 20 27 27 LEU LEU G . n G 1 21 LEU 21 28 28 LEU LEU G . n G 1 22 TYR 22 29 29 TYR TYR G . n G 1 23 THR 23 30 30 THR THR G . n G 1 24 TRP 24 31 31 TRP TRP G . n G 1 25 VAL 25 32 32 VAL VAL G . n G 1 26 SER 26 33 33 SER SER G . n H 1 1 VAL 1 8 8 VAL VAL H . n H 1 2 SER 2 9 9 SER SER H . n H 1 3 PRO 3 10 10 PRO PRO H . n H 1 4 VAL 4 11 11 VAL VAL H . n H 1 5 ILE 5 12 12 ILE ILE H . n H 1 6 ALA 6 13 13 ALA ALA H . n H 1 7 THR 7 14 14 THR THR H . n H 1 8 LEU 8 15 15 LEU LEU H . n H 1 9 LEU 9 16 16 LEU LEU H . n H 1 10 LEU 10 17 17 LEU LEU H . n H 1 11 ILE 11 18 18 ILE ILE H . n H 1 12 LEU 12 19 19 LEU LEU H . n H 1 13 ILE 13 20 20 ILE ILE H . n H 1 14 ALA 14 21 21 ALA ALA H . n H 1 15 VAL 15 22 22 VAL VAL H . n H 1 16 ALA 16 23 23 ALA ALA H . n H 1 17 ALA 17 24 24 ALA ALA H . n H 1 18 ALA 18 25 25 ALA ALA H . n H 1 19 VAL 19 26 26 VAL VAL H . n H 1 20 LEU 20 27 27 LEU LEU H . n H 1 21 LEU 21 28 28 LEU LEU H . n H 1 22 TYR 22 29 29 TYR TYR H . n H 1 23 THR 23 30 30 THR THR H . n H 1 24 TRP 24 31 31 TRP TRP H . n H 1 25 VAL 25 32 32 VAL VAL H . n H 1 26 SER 26 33 33 SER SER H . n I 1 1 VAL 1 8 8 VAL VAL I . n I 1 2 SER 2 9 9 SER SER I . n I 1 3 PRO 3 10 10 PRO PRO I . n I 1 4 VAL 4 11 11 VAL VAL I . n I 1 5 ILE 5 12 12 ILE ILE I . n I 1 6 ALA 6 13 13 ALA ALA I . n I 1 7 THR 7 14 14 THR THR I . n I 1 8 LEU 8 15 15 LEU LEU I . n I 1 9 LEU 9 16 16 LEU LEU I . n I 1 10 LEU 10 17 17 LEU LEU I . n I 1 11 ILE 11 18 18 ILE ILE I . n I 1 12 LEU 12 19 19 LEU LEU I . n I 1 13 ILE 13 20 20 ILE ILE I . n I 1 14 ALA 14 21 21 ALA ALA I . n I 1 15 VAL 15 22 22 VAL VAL I . n I 1 16 ALA 16 23 23 ALA ALA I . n I 1 17 ALA 17 24 24 ALA ALA I . n I 1 18 ALA 18 25 25 ALA ALA I . n I 1 19 VAL 19 26 26 VAL VAL I . n I 1 20 LEU 20 27 27 LEU LEU I . n I 1 21 LEU 21 28 28 LEU LEU I . n I 1 22 TYR 22 29 29 TYR TYR I . n I 1 23 THR 23 30 30 THR THR I . n I 1 24 TRP 24 31 31 TRP TRP I . n I 1 25 VAL 25 32 32 VAL VAL I . n I 1 26 SER 26 33 33 SER SER I . n J 1 1 VAL 1 8 8 VAL VAL J . n J 1 2 SER 2 9 9 SER SER J . n J 1 3 PRO 3 10 10 PRO PRO J . n J 1 4 VAL 4 11 11 VAL VAL J . n J 1 5 ILE 5 12 12 ILE ILE J . n J 1 6 ALA 6 13 13 ALA ALA J . n J 1 7 THR 7 14 14 THR THR J . n J 1 8 LEU 8 15 15 LEU LEU J . n J 1 9 LEU 9 16 16 LEU LEU J . n J 1 10 LEU 10 17 17 LEU LEU J . n J 1 11 ILE 11 18 18 ILE ILE J . n J 1 12 LEU 12 19 19 LEU LEU J . n J 1 13 ILE 13 20 20 ILE ILE J . n J 1 14 ALA 14 21 21 ALA ALA J . n J 1 15 VAL 15 22 22 VAL VAL J . n J 1 16 ALA 16 23 23 ALA ALA J . n J 1 17 ALA 17 24 24 ALA ALA J . n J 1 18 ALA 18 25 25 ALA ALA J . n J 1 19 VAL 19 26 26 VAL VAL J . n J 1 20 LEU 20 27 27 LEU LEU J . n J 1 21 LEU 21 28 28 LEU LEU J . n J 1 22 TYR 22 29 29 TYR TYR J . n J 1 23 THR 23 30 30 THR THR J . n J 1 24 TRP 24 31 31 TRP TRP J . n J 1 25 VAL 25 32 32 VAL VAL J . n J 1 26 SER 26 33 33 SER SER J . n K 1 1 VAL 1 8 8 VAL VAL K . n K 1 2 SER 2 9 9 SER SER K . n K 1 3 PRO 3 10 10 PRO PRO K . n K 1 4 VAL 4 11 11 VAL VAL K . n K 1 5 ILE 5 12 12 ILE ILE K . n K 1 6 ALA 6 13 13 ALA ALA K . n K 1 7 THR 7 14 14 THR THR K . n K 1 8 LEU 8 15 15 LEU LEU K . n K 1 9 LEU 9 16 16 LEU LEU K . n K 1 10 LEU 10 17 17 LEU LEU K . n K 1 11 ILE 11 18 18 ILE ILE K . n K 1 12 LEU 12 19 19 LEU LEU K . n K 1 13 ILE 13 20 20 ILE ILE K . n K 1 14 ALA 14 21 21 ALA ALA K . n K 1 15 VAL 15 22 22 VAL VAL K . n K 1 16 ALA 16 23 23 ALA ALA K . n K 1 17 ALA 17 24 24 ALA ALA K . n K 1 18 ALA 18 25 25 ALA ALA K . n K 1 19 VAL 19 26 26 VAL VAL K . n K 1 20 LEU 20 27 27 LEU LEU K . n K 1 21 LEU 21 28 28 LEU LEU K . n K 1 22 TYR 22 29 29 TYR TYR K . n K 1 23 THR 23 30 30 THR THR K . n K 1 24 TRP 24 31 31 TRP TRP K . n K 1 25 VAL 25 32 32 VAL VAL K . n K 1 26 SER 26 33 33 SER SER K . n L 1 1 VAL 1 8 8 VAL VAL L . n L 1 2 SER 2 9 9 SER SER L . n L 1 3 PRO 3 10 10 PRO PRO L . n L 1 4 VAL 4 11 11 VAL VAL L . n L 1 5 ILE 5 12 12 ILE ILE L . n L 1 6 ALA 6 13 13 ALA ALA L . n L 1 7 THR 7 14 14 THR THR L . n L 1 8 LEU 8 15 15 LEU LEU L . n L 1 9 LEU 9 16 16 LEU LEU L . n L 1 10 LEU 10 17 17 LEU LEU L . n L 1 11 ILE 11 18 18 ILE ILE L . n L 1 12 LEU 12 19 19 LEU LEU L . n L 1 13 ILE 13 20 20 ILE ILE L . n L 1 14 ALA 14 21 21 ALA ALA L . n L 1 15 VAL 15 22 22 VAL VAL L . n L 1 16 ALA 16 23 23 ALA ALA L . n L 1 17 ALA 17 24 24 ALA ALA L . n L 1 18 ALA 18 25 25 ALA ALA L . n L 1 19 VAL 19 26 26 VAL VAL L . n L 1 20 LEU 20 27 27 LEU LEU L . n L 1 21 LEU 21 28 28 LEU LEU L . n L 1 22 TYR 22 29 29 TYR TYR L . n L 1 23 THR 23 30 30 THR THR L . n L 1 24 TRP 24 31 31 TRP TRP L . n L 1 25 VAL 25 32 32 VAL VAL L . n L 1 26 SER 26 33 33 SER SER L . n M 1 1 VAL 1 8 8 VAL VAL M . n M 1 2 SER 2 9 9 SER SER M . n M 1 3 PRO 3 10 10 PRO PRO M . n M 1 4 VAL 4 11 11 VAL VAL M . n M 1 5 ILE 5 12 12 ILE ILE M . n M 1 6 ALA 6 13 13 ALA ALA M . n M 1 7 THR 7 14 14 THR THR M . n M 1 8 LEU 8 15 15 LEU LEU M . n M 1 9 LEU 9 16 16 LEU LEU M . n M 1 10 LEU 10 17 17 LEU LEU M . n M 1 11 ILE 11 18 18 ILE ILE M . n M 1 12 LEU 12 19 19 LEU LEU M . n M 1 13 ILE 13 20 20 ILE ILE M . n M 1 14 ALA 14 21 21 ALA ALA M . n M 1 15 VAL 15 22 22 VAL VAL M . n M 1 16 ALA 16 23 23 ALA ALA M . n M 1 17 ALA 17 24 24 ALA ALA M . n M 1 18 ALA 18 25 25 ALA ALA M . n M 1 19 VAL 19 26 26 VAL VAL M . n M 1 20 LEU 20 27 27 LEU LEU M . n M 1 21 LEU 21 28 28 LEU LEU M . n M 1 22 TYR 22 29 29 TYR TYR M . n M 1 23 THR 23 30 30 THR THR M . n M 1 24 TRP 24 31 31 TRP TRP M . n M 1 25 VAL 25 32 32 VAL VAL M . n M 1 26 SER 26 33 33 SER SER M . n N 1 1 VAL 1 8 8 VAL VAL N . n N 1 2 SER 2 9 9 SER SER N . n N 1 3 PRO 3 10 10 PRO PRO N . n N 1 4 VAL 4 11 11 VAL VAL N . n N 1 5 ILE 5 12 12 ILE ILE N . n N 1 6 ALA 6 13 13 ALA ALA N . n N 1 7 THR 7 14 14 THR THR N . n N 1 8 LEU 8 15 15 LEU LEU N . n N 1 9 LEU 9 16 16 LEU LEU N . n N 1 10 LEU 10 17 17 LEU LEU N . n N 1 11 ILE 11 18 18 ILE ILE N . n N 1 12 LEU 12 19 19 LEU LEU N . n N 1 13 ILE 13 20 20 ILE ILE N . n N 1 14 ALA 14 21 21 ALA ALA N . n N 1 15 VAL 15 22 22 VAL VAL N . n N 1 16 ALA 16 23 23 ALA ALA N . n N 1 17 ALA 17 24 24 ALA ALA N . n N 1 18 ALA 18 25 25 ALA ALA N . n N 1 19 VAL 19 26 26 VAL VAL N . n N 1 20 LEU 20 27 27 LEU LEU N . n N 1 21 LEU 21 28 28 LEU LEU N . n N 1 22 TYR 22 29 29 TYR TYR N . n N 1 23 THR 23 30 30 THR THR N . n N 1 24 TRP 24 31 31 TRP TRP N . n N 1 25 VAL 25 32 32 VAL VAL N . n N 1 26 SER 26 33 33 SER SER N . n O 1 1 VAL 1 8 8 VAL VAL O . n O 1 2 SER 2 9 9 SER SER O . n O 1 3 PRO 3 10 10 PRO PRO O . n O 1 4 VAL 4 11 11 VAL VAL O . n O 1 5 ILE 5 12 12 ILE ILE O . n O 1 6 ALA 6 13 13 ALA ALA O . n O 1 7 THR 7 14 14 THR THR O . n O 1 8 LEU 8 15 15 LEU LEU O . n O 1 9 LEU 9 16 16 LEU LEU O . n O 1 10 LEU 10 17 17 LEU LEU O . n O 1 11 ILE 11 18 18 ILE ILE O . n O 1 12 LEU 12 19 19 LEU LEU O . n O 1 13 ILE 13 20 20 ILE ILE O . n O 1 14 ALA 14 21 21 ALA ALA O . n O 1 15 VAL 15 22 22 VAL VAL O . n O 1 16 ALA 16 23 23 ALA ALA O . n O 1 17 ALA 17 24 24 ALA ALA O . n O 1 18 ALA 18 25 25 ALA ALA O . n O 1 19 VAL 19 26 26 VAL VAL O . n O 1 20 LEU 20 27 27 LEU LEU O . n O 1 21 LEU 21 28 28 LEU LEU O . n O 1 22 TYR 22 29 29 TYR TYR O . n O 1 23 THR 23 30 30 THR THR O . n O 1 24 TRP 24 31 31 TRP TRP O . n O 1 25 VAL 25 32 32 VAL VAL O . n O 1 26 SER 26 33 33 SER SER O . n P 1 1 VAL 1 8 8 VAL VAL P . n P 1 2 SER 2 9 9 SER SER P . n P 1 3 PRO 3 10 10 PRO PRO P . n P 1 4 VAL 4 11 11 VAL VAL P . n P 1 5 ILE 5 12 12 ILE ILE P . n P 1 6 ALA 6 13 13 ALA ALA P . n P 1 7 THR 7 14 14 THR THR P . n P 1 8 LEU 8 15 15 LEU LEU P . n P 1 9 LEU 9 16 16 LEU LEU P . n P 1 10 LEU 10 17 17 LEU LEU P . n P 1 11 ILE 11 18 18 ILE ILE P . n P 1 12 LEU 12 19 19 LEU LEU P . n P 1 13 ILE 13 20 20 ILE ILE P . n P 1 14 ALA 14 21 21 ALA ALA P . n P 1 15 VAL 15 22 22 VAL VAL P . n P 1 16 ALA 16 23 23 ALA ALA P . n P 1 17 ALA 17 24 24 ALA ALA P . n P 1 18 ALA 18 25 25 ALA ALA P . n P 1 19 VAL 19 26 26 VAL VAL P . n P 1 20 LEU 20 27 27 LEU LEU P . n P 1 21 LEU 21 28 28 LEU LEU P . n P 1 22 TYR 22 29 29 TYR TYR P . n P 1 23 THR 23 30 30 THR THR P . n P 1 24 TRP 24 31 31 TRP TRP P . n P 1 25 VAL 25 32 32 VAL VAL P . n P 1 26 SER 26 33 33 SER SER P . n Q 1 1 VAL 1 8 8 VAL VAL Q . n Q 1 2 SER 2 9 9 SER SER Q . n Q 1 3 PRO 3 10 10 PRO PRO Q . n Q 1 4 VAL 4 11 11 VAL VAL Q . n Q 1 5 ILE 5 12 12 ILE ILE Q . n Q 1 6 ALA 6 13 13 ALA ALA Q . n Q 1 7 THR 7 14 14 THR THR Q . n Q 1 8 LEU 8 15 15 LEU LEU Q . n Q 1 9 LEU 9 16 16 LEU LEU Q . n Q 1 10 LEU 10 17 17 LEU LEU Q . n Q 1 11 ILE 11 18 18 ILE ILE Q . n Q 1 12 LEU 12 19 19 LEU LEU Q . n Q 1 13 ILE 13 20 20 ILE ILE Q . n Q 1 14 ALA 14 21 21 ALA ALA Q . n Q 1 15 VAL 15 22 22 VAL VAL Q . n Q 1 16 ALA 16 23 23 ALA ALA Q . n Q 1 17 ALA 17 24 24 ALA ALA Q . n Q 1 18 ALA 18 25 25 ALA ALA Q . n Q 1 19 VAL 19 26 26 VAL VAL Q . n Q 1 20 LEU 20 27 27 LEU LEU Q . n Q 1 21 LEU 21 28 28 LEU LEU Q . n Q 1 22 TYR 22 29 29 TYR TYR Q . n Q 1 23 THR 23 30 30 THR THR Q . n Q 1 24 TRP 24 31 31 TRP TRP Q . n Q 1 25 VAL 25 32 32 VAL VAL Q . n Q 1 26 SER 26 33 33 SER SER Q . n R 1 1 VAL 1 8 8 VAL VAL R . n R 1 2 SER 2 9 9 SER SER R . n R 1 3 PRO 3 10 10 PRO PRO R . n R 1 4 VAL 4 11 11 VAL VAL R . n R 1 5 ILE 5 12 12 ILE ILE R . n R 1 6 ALA 6 13 13 ALA ALA R . n R 1 7 THR 7 14 14 THR THR R . n R 1 8 LEU 8 15 15 LEU LEU R . n R 1 9 LEU 9 16 16 LEU LEU R . n R 1 10 LEU 10 17 17 LEU LEU R . n R 1 11 ILE 11 18 18 ILE ILE R . n R 1 12 LEU 12 19 19 LEU LEU R . n R 1 13 ILE 13 20 20 ILE ILE R . n R 1 14 ALA 14 21 21 ALA ALA R . n R 1 15 VAL 15 22 22 VAL VAL R . n R 1 16 ALA 16 23 23 ALA ALA R . n R 1 17 ALA 17 24 24 ALA ALA R . n R 1 18 ALA 18 25 25 ALA ALA R . n R 1 19 VAL 19 26 26 VAL VAL R . n R 1 20 LEU 20 27 27 LEU LEU R . n R 1 21 LEU 21 28 28 LEU LEU R . n R 1 22 TYR 22 29 29 TYR TYR R . n R 1 23 THR 23 30 30 THR THR R . n R 1 24 TRP 24 31 31 TRP TRP R . n R 1 25 VAL 25 32 32 VAL VAL R . n R 1 26 SER 26 33 33 SER SER R . n S 1 1 VAL 1 8 8 VAL VAL S . n S 1 2 SER 2 9 9 SER SER S . n S 1 3 PRO 3 10 10 PRO PRO S . n S 1 4 VAL 4 11 11 VAL VAL S . n S 1 5 ILE 5 12 12 ILE ILE S . n S 1 6 ALA 6 13 13 ALA ALA S . n S 1 7 THR 7 14 14 THR THR S . n S 1 8 LEU 8 15 15 LEU LEU S . n S 1 9 LEU 9 16 16 LEU LEU S . n S 1 10 LEU 10 17 17 LEU LEU S . n S 1 11 ILE 11 18 18 ILE ILE S . n S 1 12 LEU 12 19 19 LEU LEU S . n S 1 13 ILE 13 20 20 ILE ILE S . n S 1 14 ALA 14 21 21 ALA ALA S . n S 1 15 VAL 15 22 22 VAL VAL S . n S 1 16 ALA 16 23 23 ALA ALA S . n S 1 17 ALA 17 24 24 ALA ALA S . n S 1 18 ALA 18 25 25 ALA ALA S . n S 1 19 VAL 19 26 26 VAL VAL S . n S 1 20 LEU 20 27 27 LEU LEU S . n S 1 21 LEU 21 28 28 LEU LEU S . n S 1 22 TYR 22 29 29 TYR TYR S . n S 1 23 THR 23 30 30 THR THR S . n S 1 24 TRP 24 31 31 TRP TRP S . n S 1 25 VAL 25 32 32 VAL VAL S . n S 1 26 SER 26 33 33 SER SER S . n T 1 1 VAL 1 8 8 VAL VAL T . n T 1 2 SER 2 9 9 SER SER T . n T 1 3 PRO 3 10 10 PRO PRO T . n T 1 4 VAL 4 11 11 VAL VAL T . n T 1 5 ILE 5 12 12 ILE ILE T . n T 1 6 ALA 6 13 13 ALA ALA T . n T 1 7 THR 7 14 14 THR THR T . n T 1 8 LEU 8 15 15 LEU LEU T . n T 1 9 LEU 9 16 16 LEU LEU T . n T 1 10 LEU 10 17 17 LEU LEU T . n T 1 11 ILE 11 18 18 ILE ILE T . n T 1 12 LEU 12 19 19 LEU LEU T . n T 1 13 ILE 13 20 20 ILE ILE T . n T 1 14 ALA 14 21 21 ALA ALA T . n T 1 15 VAL 15 22 22 VAL VAL T . n T 1 16 ALA 16 23 23 ALA ALA T . n T 1 17 ALA 17 24 24 ALA ALA T . n T 1 18 ALA 18 25 25 ALA ALA T . n T 1 19 VAL 19 26 26 VAL VAL T . n T 1 20 LEU 20 27 27 LEU LEU T . n T 1 21 LEU 21 28 28 LEU LEU T . n T 1 22 TYR 22 29 29 TYR TYR T . n T 1 23 THR 23 30 30 THR THR T . n T 1 24 TRP 24 31 31 TRP TRP T . n T 1 25 VAL 25 32 32 VAL VAL T . n T 1 26 SER 26 33 33 SER SER T . n U 1 1 VAL 1 8 8 VAL VAL U . n U 1 2 SER 2 9 9 SER SER U . n U 1 3 PRO 3 10 10 PRO PRO U . n U 1 4 VAL 4 11 11 VAL VAL U . n U 1 5 ILE 5 12 12 ILE ILE U . n U 1 6 ALA 6 13 13 ALA ALA U . n U 1 7 THR 7 14 14 THR THR U . n U 1 8 LEU 8 15 15 LEU LEU U . n U 1 9 LEU 9 16 16 LEU LEU U . n U 1 10 LEU 10 17 17 LEU LEU U . n U 1 11 ILE 11 18 18 ILE ILE U . n U 1 12 LEU 12 19 19 LEU LEU U . n U 1 13 ILE 13 20 20 ILE ILE U . n U 1 14 ALA 14 21 21 ALA ALA U . n U 1 15 VAL 15 22 22 VAL VAL U . n U 1 16 ALA 16 23 23 ALA ALA U . n U 1 17 ALA 17 24 24 ALA ALA U . n U 1 18 ALA 18 25 25 ALA ALA U . n U 1 19 VAL 19 26 26 VAL VAL U . n U 1 20 LEU 20 27 27 LEU LEU U . n U 1 21 LEU 21 28 28 LEU LEU U . n U 1 22 TYR 22 29 29 TYR TYR U . n U 1 23 THR 23 30 30 THR THR U . n U 1 24 TRP 24 31 31 TRP TRP U . n U 1 25 VAL 25 32 32 VAL VAL U . n U 1 26 SER 26 33 33 SER SER U . n # _cell.entry_id 3J1R _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J1R _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3J1R _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4011 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4011 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 3J1R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3J1R _struct.title 'Filaments from Ignicoccus hospitalis Show Diversity of Packing in Proteins Containing N-terminal Type IV Pilin Helices' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J1R _struct_keywords.pdbx_keywords 'CELL ADHESION, STRUCTURAL PROTEIN' _struct_keywords.text 'helical polymer, flagellar filament, CELL ADHESION, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 1 ? Q N N 1 ? R N N 1 ? S N N 1 ? T N N 1 ? U N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A8AAA0_IGNH4 _struct_ref.pdbx_db_accession A8AAA0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VSPVIATLLLILIAVAAAVLLYTWVS _struct_ref.pdbx_align_begin 8 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3J1R A 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 2 1 3J1R B 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 3 1 3J1R C 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 4 1 3J1R D 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 5 1 3J1R E 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 6 1 3J1R F 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 7 1 3J1R G 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 8 1 3J1R H 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 9 1 3J1R I 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 10 1 3J1R J 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 11 1 3J1R K 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 12 1 3J1R L 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 13 1 3J1R M 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 14 1 3J1R N 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 15 1 3J1R O 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 16 1 3J1R P 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 17 1 3J1R Q 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 18 1 3J1R R 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 19 1 3J1R S 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 20 1 3J1R T 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 21 1 3J1R U 1 ? 26 ? A8AAA0 8 ? 33 ? 8 33 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 21-meric _pdbx_struct_assembly.oligomeric_count 21 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: ROTATION PER SUBUNIT (TWIST) = 106.65 DEGREES; RISE PER SUBUNIT (HEIGHT) = 5.3 ANGSTROM ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? SER A 26 ? SER A 9 SER A 33 1 ? 25 HELX_P HELX_P2 2 SER B 2 ? SER B 26 ? SER B 9 SER B 33 1 ? 25 HELX_P HELX_P3 3 SER C 2 ? SER C 26 ? SER C 9 SER C 33 1 ? 25 HELX_P HELX_P4 4 SER D 2 ? SER D 26 ? SER D 9 SER D 33 1 ? 25 HELX_P HELX_P5 5 SER E 2 ? SER E 26 ? SER E 9 SER E 33 1 ? 25 HELX_P HELX_P6 6 SER F 2 ? SER F 26 ? SER F 9 SER F 33 1 ? 25 HELX_P HELX_P7 7 SER G 2 ? SER G 26 ? SER G 9 SER G 33 1 ? 25 HELX_P HELX_P8 8 SER H 2 ? SER H 26 ? SER H 9 SER H 33 1 ? 25 HELX_P HELX_P9 9 SER I 2 ? SER I 26 ? SER I 9 SER I 33 1 ? 25 HELX_P HELX_P10 10 SER J 2 ? SER J 26 ? SER J 9 SER J 33 1 ? 25 HELX_P HELX_P11 11 SER K 2 ? SER K 26 ? SER K 9 SER K 33 1 ? 25 HELX_P HELX_P12 12 SER L 2 ? SER L 26 ? SER L 9 SER L 33 1 ? 25 HELX_P HELX_P13 13 SER M 2 ? SER M 26 ? SER M 9 SER M 33 1 ? 25 HELX_P HELX_P14 14 SER N 2 ? SER N 26 ? SER N 9 SER N 33 1 ? 25 HELX_P HELX_P15 15 SER O 2 ? SER O 26 ? SER O 9 SER O 33 1 ? 25 HELX_P HELX_P16 16 SER P 2 ? SER P 26 ? SER P 9 SER P 33 1 ? 25 HELX_P HELX_P17 17 SER Q 2 ? SER Q 26 ? SER Q 9 SER Q 33 1 ? 25 HELX_P HELX_P18 18 SER R 2 ? SER R 26 ? SER R 9 SER R 33 1 ? 25 HELX_P HELX_P19 19 SER S 2 ? SER S 26 ? SER S 9 SER S 33 1 ? 25 HELX_P HELX_P20 20 SER T 2 ? SER T 26 ? SER T 9 SER T 33 1 ? 25 HELX_P HELX_P21 21 SER U 2 ? SER U 26 ? SER U 9 SER U 33 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 3J1R _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THOUGH THE FULL PROTEIN (UNP RESIDUES 1-310) WAS PRESENT, ONLY RESIDUES 8-33 WERE MODELED.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _em_3d_reconstruction.entry_id 3J1R _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method IHRSR _em_3d_reconstruction.nominal_pixel_size 1.25 _em_3d_reconstruction.actual_pixel_size 1.25 _em_3d_reconstruction.resolution 7.5 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.algorithm ? # _em_entity_assembly.id 1 _em_entity_assembly.name 'Adhesion filament' _em_entity_assembly.type COMPLEX _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 3J1R _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 17 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J1R _em_imaging.id 1 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.specimen_id 1 _em_imaging.date 2011-01-01 _em_imaging.temperature ? _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1700 _em_imaging.nominal_defocus_max 3400 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.0 _em_imaging.nominal_magnification 55000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'GATAN LIQUID NITROGEN' _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_vitrification.entry_id 3J1R _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.details ? _em_vitrification.citation_id ? _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 3J1R _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method HELICAL # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ILE N N N N 14 ILE CA C N S 15 ILE C C N N 16 ILE O O N N 17 ILE CB C N S 18 ILE CG1 C N N 19 ILE CG2 C N N 20 ILE CD1 C N N 21 ILE OXT O N N 22 ILE H H N N 23 ILE H2 H N N 24 ILE HA H N N 25 ILE HB H N N 26 ILE HG12 H N N 27 ILE HG13 H N N 28 ILE HG21 H N N 29 ILE HG22 H N N 30 ILE HG23 H N N 31 ILE HD11 H N N 32 ILE HD12 H N N 33 ILE HD13 H N N 34 ILE HXT H N N 35 LEU N N N N 36 LEU CA C N S 37 LEU C C N N 38 LEU O O N N 39 LEU CB C N N 40 LEU CG C N N 41 LEU CD1 C N N 42 LEU CD2 C N N 43 LEU OXT O N N 44 LEU H H N N 45 LEU H2 H N N 46 LEU HA H N N 47 LEU HB2 H N N 48 LEU HB3 H N N 49 LEU HG H N N 50 LEU HD11 H N N 51 LEU HD12 H N N 52 LEU HD13 H N N 53 LEU HD21 H N N 54 LEU HD22 H N N 55 LEU HD23 H N N 56 LEU HXT H N N 57 PRO N N N N 58 PRO CA C N S 59 PRO C C N N 60 PRO O O N N 61 PRO CB C N N 62 PRO CG C N N 63 PRO CD C N N 64 PRO OXT O N N 65 PRO H H N N 66 PRO HA H N N 67 PRO HB2 H N N 68 PRO HB3 H N N 69 PRO HG2 H N N 70 PRO HG3 H N N 71 PRO HD2 H N N 72 PRO HD3 H N N 73 PRO HXT H N N 74 SER N N N N 75 SER CA C N S 76 SER C C N N 77 SER O O N N 78 SER CB C N N 79 SER OG O N N 80 SER OXT O N N 81 SER H H N N 82 SER H2 H N N 83 SER HA H N N 84 SER HB2 H N N 85 SER HB3 H N N 86 SER HG H N N 87 SER HXT H N N 88 THR N N N N 89 THR CA C N S 90 THR C C N N 91 THR O O N N 92 THR CB C N R 93 THR OG1 O N N 94 THR CG2 C N N 95 THR OXT O N N 96 THR H H N N 97 THR H2 H N N 98 THR HA H N N 99 THR HB H N N 100 THR HG1 H N N 101 THR HG21 H N N 102 THR HG22 H N N 103 THR HG23 H N N 104 THR HXT H N N 105 TRP N N N N 106 TRP CA C N S 107 TRP C C N N 108 TRP O O N N 109 TRP CB C N N 110 TRP CG C Y N 111 TRP CD1 C Y N 112 TRP CD2 C Y N 113 TRP NE1 N Y N 114 TRP CE2 C Y N 115 TRP CE3 C Y N 116 TRP CZ2 C Y N 117 TRP CZ3 C Y N 118 TRP CH2 C Y N 119 TRP OXT O N N 120 TRP H H N N 121 TRP H2 H N N 122 TRP HA H N N 123 TRP HB2 H N N 124 TRP HB3 H N N 125 TRP HD1 H N N 126 TRP HE1 H N N 127 TRP HE3 H N N 128 TRP HZ2 H N N 129 TRP HZ3 H N N 130 TRP HH2 H N N 131 TRP HXT H N N 132 TYR N N N N 133 TYR CA C N S 134 TYR C C N N 135 TYR O O N N 136 TYR CB C N N 137 TYR CG C Y N 138 TYR CD1 C Y N 139 TYR CD2 C Y N 140 TYR CE1 C Y N 141 TYR CE2 C Y N 142 TYR CZ C Y N 143 TYR OH O N N 144 TYR OXT O N N 145 TYR H H N N 146 TYR H2 H N N 147 TYR HA H N N 148 TYR HB2 H N N 149 TYR HB3 H N N 150 TYR HD1 H N N 151 TYR HD2 H N N 152 TYR HE1 H N N 153 TYR HE2 H N N 154 TYR HH H N N 155 TYR HXT H N N 156 VAL N N N N 157 VAL CA C N S 158 VAL C C N N 159 VAL O O N N 160 VAL CB C N N 161 VAL CG1 C N N 162 VAL CG2 C N N 163 VAL OXT O N N 164 VAL H H N N 165 VAL H2 H N N 166 VAL HA H N N 167 VAL HB H N N 168 VAL HG11 H N N 169 VAL HG12 H N N 170 VAL HG13 H N N 171 VAL HG21 H N N 172 VAL HG22 H N N 173 VAL HG23 H N N 174 VAL HXT H N N 175 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ILE N CA sing N N 13 ILE N H sing N N 14 ILE N H2 sing N N 15 ILE CA C sing N N 16 ILE CA CB sing N N 17 ILE CA HA sing N N 18 ILE C O doub N N 19 ILE C OXT sing N N 20 ILE CB CG1 sing N N 21 ILE CB CG2 sing N N 22 ILE CB HB sing N N 23 ILE CG1 CD1 sing N N 24 ILE CG1 HG12 sing N N 25 ILE CG1 HG13 sing N N 26 ILE CG2 HG21 sing N N 27 ILE CG2 HG22 sing N N 28 ILE CG2 HG23 sing N N 29 ILE CD1 HD11 sing N N 30 ILE CD1 HD12 sing N N 31 ILE CD1 HD13 sing N N 32 ILE OXT HXT sing N N 33 LEU N CA sing N N 34 LEU N H sing N N 35 LEU N H2 sing N N 36 LEU CA C sing N N 37 LEU CA CB sing N N 38 LEU CA HA sing N N 39 LEU C O doub N N 40 LEU C OXT sing N N 41 LEU CB CG sing N N 42 LEU CB HB2 sing N N 43 LEU CB HB3 sing N N 44 LEU CG CD1 sing N N 45 LEU CG CD2 sing N N 46 LEU CG HG sing N N 47 LEU CD1 HD11 sing N N 48 LEU CD1 HD12 sing N N 49 LEU CD1 HD13 sing N N 50 LEU CD2 HD21 sing N N 51 LEU CD2 HD22 sing N N 52 LEU CD2 HD23 sing N N 53 LEU OXT HXT sing N N 54 PRO N CA sing N N 55 PRO N CD sing N N 56 PRO N H sing N N 57 PRO CA C sing N N 58 PRO CA CB sing N N 59 PRO CA HA sing N N 60 PRO C O doub N N 61 PRO C OXT sing N N 62 PRO CB CG sing N N 63 PRO CB HB2 sing N N 64 PRO CB HB3 sing N N 65 PRO CG CD sing N N 66 PRO CG HG2 sing N N 67 PRO CG HG3 sing N N 68 PRO CD HD2 sing N N 69 PRO CD HD3 sing N N 70 PRO OXT HXT sing N N 71 SER N CA sing N N 72 SER N H sing N N 73 SER N H2 sing N N 74 SER CA C sing N N 75 SER CA CB sing N N 76 SER CA HA sing N N 77 SER C O doub N N 78 SER C OXT sing N N 79 SER CB OG sing N N 80 SER CB HB2 sing N N 81 SER CB HB3 sing N N 82 SER OG HG sing N N 83 SER OXT HXT sing N N 84 THR N CA sing N N 85 THR N H sing N N 86 THR N H2 sing N N 87 THR CA C sing N N 88 THR CA CB sing N N 89 THR CA HA sing N N 90 THR C O doub N N 91 THR C OXT sing N N 92 THR CB OG1 sing N N 93 THR CB CG2 sing N N 94 THR CB HB sing N N 95 THR OG1 HG1 sing N N 96 THR CG2 HG21 sing N N 97 THR CG2 HG22 sing N N 98 THR CG2 HG23 sing N N 99 THR OXT HXT sing N N 100 TRP N CA sing N N 101 TRP N H sing N N 102 TRP N H2 sing N N 103 TRP CA C sing N N 104 TRP CA CB sing N N 105 TRP CA HA sing N N 106 TRP C O doub N N 107 TRP C OXT sing N N 108 TRP CB CG sing N N 109 TRP CB HB2 sing N N 110 TRP CB HB3 sing N N 111 TRP CG CD1 doub Y N 112 TRP CG CD2 sing Y N 113 TRP CD1 NE1 sing Y N 114 TRP CD1 HD1 sing N N 115 TRP CD2 CE2 doub Y N 116 TRP CD2 CE3 sing Y N 117 TRP NE1 CE2 sing Y N 118 TRP NE1 HE1 sing N N 119 TRP CE2 CZ2 sing Y N 120 TRP CE3 CZ3 doub Y N 121 TRP CE3 HE3 sing N N 122 TRP CZ2 CH2 doub Y N 123 TRP CZ2 HZ2 sing N N 124 TRP CZ3 CH2 sing Y N 125 TRP CZ3 HZ3 sing N N 126 TRP CH2 HH2 sing N N 127 TRP OXT HXT sing N N 128 TYR N CA sing N N 129 TYR N H sing N N 130 TYR N H2 sing N N 131 TYR CA C sing N N 132 TYR CA CB sing N N 133 TYR CA HA sing N N 134 TYR C O doub N N 135 TYR C OXT sing N N 136 TYR CB CG sing N N 137 TYR CB HB2 sing N N 138 TYR CB HB3 sing N N 139 TYR CG CD1 doub Y N 140 TYR CG CD2 sing Y N 141 TYR CD1 CE1 sing Y N 142 TYR CD1 HD1 sing N N 143 TYR CD2 CE2 doub Y N 144 TYR CD2 HD2 sing N N 145 TYR CE1 CZ doub Y N 146 TYR CE1 HE1 sing N N 147 TYR CE2 CZ sing Y N 148 TYR CE2 HE2 sing N N 149 TYR CZ OH sing N N 150 TYR OH HH sing N N 151 TYR OXT HXT sing N N 152 VAL N CA sing N N 153 VAL N H sing N N 154 VAL N H2 sing N N 155 VAL CA C sing N N 156 VAL CA CB sing N N 157 VAL CA HA sing N N 158 VAL C O doub N N 159 VAL C OXT sing N N 160 VAL CB CG1 sing N N 161 VAL CB CG2 sing N N 162 VAL CB HB sing N N 163 VAL CG1 HG11 sing N N 164 VAL CG1 HG12 sing N N 165 VAL CG1 HG13 sing N N 166 VAL CG2 HG21 sing N N 167 VAL CG2 HG22 sing N N 168 VAL CG2 HG23 sing N N 169 VAL OXT HXT sing N N 170 # _em_ctf_correction.id 1 _em_ctf_correction.details ;Each image was multiplied by the CTF. The final volume was amplitude-corrected in Fourier space by dividing by the sum of the squared CTFs. ; _em_ctf_correction.type . # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit 106.65 _em_helical_entity.axial_rise_per_subunit 5.3 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image . _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 IHRSR ? RECONSTRUCTION ? 1 2 SPIDER ? RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _atom_sites.entry_id 3J1R _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_