HEADER METAL TRANSPORT 24-JUL-12 3J1Z TITLE INWARD-FACING CONFORMATION OF THE ZINC TRANSPORTER YIIP REVEALED BY TITLE 2 CRYO-ELECTRON MICROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATION EFFLUX FAMILY PROTEIN; COMPND 3 CHAIN: P, Q; COMPND 4 SYNONYM: YIIP, FERROUS-IRON EFFLUX PUMP (FIEF); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: SO_4475; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS ZINC TRANSPORTER, SECONDARY TRANSPORTER, ALTERNATING ACCESS KEYWDS 2 MECHANISM, METAL TRANSPORT, STRUCTURAL GENOMICS, PSI-BIOLOGY, KEYWDS 3 TRANSCONTINENTAL EM INITIATIVE FOR MEMBRANE PROTEIN STRUCTURE, KEYWDS 4 TEMIMPS EXPDTA ELECTRON MICROSCOPY AUTHOR N.COUDRAY,S.VALVO,M.HU,R.LASALA,C.KIM,M.VINK,M.ZHOU,D.PROVASI, AUTHOR 2 M.FILIZOLA,J.TAO,J.FANG,P.A.PENCZEK,I.UBARRETXENA-BELANDIA, AUTHOR 3 D.L.STOKES,TRANSCONTINENTAL EM INITIATIVE FOR MEMBRANE PROTEIN AUTHOR 4 STRUCTURE (TEMIMPS) REVDAT 6 21-FEB-24 3J1Z 1 REMARK SEQADV REVDAT 5 18-JUL-18 3J1Z 1 REMARK REVDAT 4 13-FEB-13 3J1Z 1 JRNL REVDAT 3 06-FEB-13 3J1Z 1 JRNL REVDAT 2 09-JAN-13 3J1Z 1 COMPND REVDAT 1 10-OCT-12 3J1Z 0 JRNL AUTH N.COUDRAY,S.VALVO,M.HU,R.LASALA,C.KIM,M.VINK,M.ZHOU, JRNL AUTH 2 D.PROVASI,M.FILIZOLA,J.TAO,J.FANG,P.A.PENCZEK, JRNL AUTH 3 I.UBARRETXENA-BELANDIA,D.L.STOKES JRNL TITL INWARD-FACING CONFORMATION OF THE ZINC TRANSPORTER YIIP JRNL TITL 2 REVEALED BY CRYOELECTRON MICROSCOPY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 2140 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23341604 JRNL DOI 10.1073/PNAS.1215455110 REMARK 2 REMARK 2 RESOLUTION. 13.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EMIP, SPARX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3H90 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--MDFF DETAILS--AN INITIAL HOMOLOGY REMARK 3 MODEL OF YIIP FROM S. ONEIDENSIS WAS BUILT WITH MODELLER 9V7 REMARK 3 USING THE X-RAY CRYSTAL STRUCTURE OF YIIP FROM E. COLI (PDB REMARK 3 ENTRY 3H90) AS A TEMPLATE. THIS MODEL INCLUDED 9 RESIDUES AT THE REMARK 3 N-TERMINUS AND 4 RESIDUES AT THE C-TERMINUS THAT WERE NOT REMARK 3 PRESENT IN THE X-RAY STRUCTURE. INITIAL CONFIGURATIONS WERE REMARK 3 OBTAINED BY MANUALLY PLACING THE SYMMETRY AXIS OF THE HOMOLOGY REMARK 3 MODEL ONTO THE SYMMETRY AXIS OF THE ELECTRON DENSITY MAP AND REMARK 3 ALIGNING THE PROTEIN C-TERMINAL DOMAINS TO THE CORRESPONDING REMARK 3 DENSITIES. IN THE FIRST STEP OF THE MDFF FITTING, HARMONIC REMARK 3 POTENTIALS WERE APPLIED TO (A) THE FOUR-HELIX BUNDLE FORMED BY REMARK 3 HELICES M1, M2, M4, AND M5 (RESIDUES 12-32, 42-65, 119-142, AND REMARK 3 147-165, RESPECTIVELY), (B) THE M3 AND M6 HELICES AT THE DIMERIC REMARK 3 INTERFACE (RESIDUES 78-108 AND 179-211, RESPECTIVELY), AND (C) REMARK 3 THE C-TERMINAL INTRACELLULAR DOMAIN (RESIDUES 212-297). REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 13.00 REMARK 3 NUMBER OF PARTICLES : NULL REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: CRYSTAL CELL PARAMETERS WERE A=57.5, B=34.0, REMARK 3 C=100.0, ALPHA=90, BETA=90, GAMMA=85.3. REMARK 4 REMARK 4 3J1Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000160149. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : 2D ARRAY REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : YIIP FROM SHEWANELLA ONEIDENSIS REMARK 245 IN DOPG LIPIDS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON GRID REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FOR 2-5 SECONDS BEFORE REMARK 245 PLUNGING INTO LIQUID ETHANE REMARK 245 (GATAN CRYOPLUNGER) REMARK 245 SAMPLE BUFFER : 20MM TES, 5MM MGCL2, 100MM REMARK 245 NACL, 5MM NAN3 REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 10-FEB-09 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 100.00 REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : GENERIC FILM REMARK 245 MINIMUM DEFOCUS (NM) : 1600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.10 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : 51190 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SYMMETRY OF THE HELIX IS D3. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = 56.40 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 17.10 ANGSTROMS REMARK 300 IN ADDITION, THERE IS 3-FOLD CIRCULAR REMARK 300 SYMMETRY AROUND THE HELIX AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, Q REMARK 350 BIOMT1 1 -0.982287 0.000000 -0.187381 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -51.30000 REMARK 350 BIOMT3 1 0.187381 0.000000 -0.982287 0.00000 REMARK 350 BIOMT1 2 0.653421 0.000000 -0.756995 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -51.30000 REMARK 350 BIOMT3 2 0.756995 0.000000 0.653421 0.00000 REMARK 350 BIOMT1 3 0.328867 0.000000 0.944376 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -51.30000 REMARK 350 BIOMT3 3 -0.944376 0.000000 0.328867 0.00000 REMARK 350 BIOMT1 4 -0.387516 0.000000 -0.921863 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -34.20000 REMARK 350 BIOMT3 4 0.921863 0.000000 -0.387516 0.00000 REMARK 350 BIOMT1 5 0.992115 0.000000 0.125333 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 -34.20000 REMARK 350 BIOMT3 5 -0.125333 0.000000 0.992115 0.00000 REMARK 350 BIOMT1 6 -0.604599 0.000000 0.796530 0.00000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 -34.20000 REMARK 350 BIOMT3 6 -0.796530 0.000000 -0.604599 0.00000 REMARK 350 BIOMT1 7 0.553392 0.000000 -0.832921 0.00000 REMARK 350 BIOMT2 7 0.000000 1.000000 0.000000 -17.10000 REMARK 350 BIOMT3 7 0.832921 0.000000 0.553392 0.00000 REMARK 350 BIOMT1 8 0.444635 0.000000 0.895712 0.00000 REMARK 350 BIOMT2 8 0.000000 1.000000 0.000000 -17.10000 REMARK 350 BIOMT3 8 -0.895712 0.000000 0.444635 0.00000 REMARK 350 BIOMT1 9 -0.998027 0.000000 -0.062791 0.00000 REMARK 350 BIOMT2 9 0.000000 1.000000 0.000000 -17.10000 REMARK 350 BIOMT3 9 0.062791 0.000000 -0.998027 0.00000 REMARK 350 BIOMT1 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 10 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 11 -0.500000 0.000000 0.866025 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 -0.866025 0.000000 -0.500000 0.00000 REMARK 350 BIOMT1 12 -0.500000 0.000000 -0.866025 0.00000 REMARK 350 BIOMT2 12 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 12 0.866025 0.000000 -0.500000 0.00000 REMARK 350 BIOMT1 13 0.553392 0.000000 0.832921 0.00000 REMARK 350 BIOMT2 13 0.000000 1.000000 0.000000 17.10000 REMARK 350 BIOMT3 13 -0.832921 0.000000 0.553392 0.00000 REMARK 350 BIOMT1 14 -0.998027 0.000000 0.062791 0.00000 REMARK 350 BIOMT2 14 0.000000 1.000000 0.000000 17.10000 REMARK 350 BIOMT3 14 -0.062791 0.000000 -0.998027 0.00000 REMARK 350 BIOMT1 15 0.444635 0.000000 -0.895712 0.00000 REMARK 350 BIOMT2 15 0.000000 1.000000 0.000000 17.10000 REMARK 350 BIOMT3 15 0.895712 0.000000 0.444635 0.00000 REMARK 350 BIOMT1 16 -0.387516 0.000000 0.921863 0.00000 REMARK 350 BIOMT2 16 0.000000 1.000000 0.000000 34.20000 REMARK 350 BIOMT3 16 -0.921863 0.000000 -0.387516 0.00000 REMARK 350 BIOMT1 17 -0.604599 0.000000 -0.796530 0.00000 REMARK 350 BIOMT2 17 0.000000 1.000000 0.000000 34.20000 REMARK 350 BIOMT3 17 0.796530 0.000000 -0.604599 0.00000 REMARK 350 BIOMT1 18 0.992115 0.000000 -0.125333 0.00000 REMARK 350 BIOMT2 18 0.000000 1.000000 0.000000 34.20000 REMARK 350 BIOMT3 18 0.125333 0.000000 0.992115 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS P 297 REMARK 465 HIS P 298 REMARK 465 HIS P 299 REMARK 465 HIS P 300 REMARK 465 HIS P 301 REMARK 465 HIS P 302 REMARK 465 HIS P 303 REMARK 465 HIS P 304 REMARK 465 HIS P 305 REMARK 465 HIS P 306 REMARK 465 HIS Q 593 REMARK 465 HIS Q 594 REMARK 465 HIS Q 595 REMARK 465 HIS Q 596 REMARK 465 HIS Q 597 REMARK 465 HIS Q 598 REMARK 465 HIS Q 599 REMARK 465 HIS Q 600 REMARK 465 HIS Q 601 REMARK 465 HIS Q 602 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE P 59 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 PHE P 59 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG P 219 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG P 239 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG P 272 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG Q 402 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG Q 506 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR P 7 -71.90 85.57 REMARK 500 PHE P 9 -118.99 54.57 REMARK 500 VAL P 11 79.60 -63.63 REMARK 500 ILE P 26 -7.77 -56.50 REMARK 500 ALA P 32 11.45 -65.12 REMARK 500 ASP P 51 -83.04 -28.27 REMARK 500 ASP P 70 164.86 -46.69 REMARK 500 HIS P 71 11.59 -148.32 REMARK 500 ARG P 74 -22.29 67.82 REMARK 500 HIS P 77 42.04 -80.17 REMARK 500 LEU P 108 -17.41 93.31 REMARK 500 PRO P 112 -169.62 -72.42 REMARK 500 THR P 117 -11.63 -164.32 REMARK 500 LEU P 118 120.19 72.82 REMARK 500 THR P 144 94.48 173.36 REMARK 500 LEU P 160 -5.03 -56.12 REMARK 500 VAL P 171 -162.54 50.77 REMARK 500 LEU P 172 135.12 -32.91 REMARK 500 TRP P 178 -24.63 67.62 REMARK 500 TRP P 179 104.18 80.62 REMARK 500 ASP P 213 173.21 -53.59 REMARK 500 LEU P 233 86.56 117.94 REMARK 500 ARG P 237 41.71 -89.57 REMARK 500 ALA P 241 114.24 -163.91 REMARK 500 ILE P 247 77.87 -101.91 REMARK 500 LEU P 251 106.81 -162.08 REMARK 500 SER Q 301 155.90 -30.06 REMARK 500 TYR Q 303 15.91 -152.04 REMARK 500 ASP Q 304 174.38 39.31 REMARK 500 PHE Q 305 75.81 55.27 REMARK 500 LYS Q 308 16.60 -145.90 REMARK 500 ASP Q 366 -103.80 -92.07 REMARK 500 ARG Q 370 -85.44 -4.86 REMARK 500 HIS Q 373 -22.30 -37.40 REMARK 500 LEU Q 404 -13.94 67.61 REMARK 500 SER Q 407 150.28 142.45 REMARK 500 THR Q 413 -146.73 47.63 REMARK 500 VAL Q 416 -24.03 -36.40 REMARK 500 VAL Q 445 -9.85 -162.74 REMARK 500 LEU Q 463 -146.57 -78.43 REMARK 500 ALA Q 465 11.03 -141.84 REMARK 500 LEU Q 466 -64.68 -145.30 REMARK 500 ASP Q 505 41.73 -87.23 REMARK 500 ASP Q 509 -169.67 -53.29 REMARK 500 ALA Q 520 36.06 -80.51 REMARK 500 LYS Q 521 17.49 -149.71 REMARK 500 LEU Q 529 66.57 69.38 REMARK 500 LEU Q 532 85.04 -172.74 REMARK 500 LYS Q 539 -95.85 -127.12 REMARK 500 THR Q 540 107.21 3.84 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU P 170 VAL P 171 -135.53 REMARK 500 SER P 173 GLN P 174 -140.53 REMARK 500 ALA P 280 GLU P 281 144.60 REMARK 500 THR Q 298 GLN Q 299 -149.63 REMARK 500 ASP Q 531 LEU Q 532 142.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR P 102 0.09 SIDE CHAIN REMARK 500 ARG P 139 0.17 SIDE CHAIN REMARK 500 TYR P 191 0.07 SIDE CHAIN REMARK 500 ARG P 210 0.19 SIDE CHAIN REMARK 500 ARG P 217 0.14 SIDE CHAIN REMARK 500 ARG P 219 0.11 SIDE CHAIN REMARK 500 ARG P 237 0.08 SIDE CHAIN REMARK 500 ARG P 239 0.09 SIDE CHAIN REMARK 500 ARG P 272 0.17 SIDE CHAIN REMARK 500 ARG Q 312 0.09 SIDE CHAIN REMARK 500 HIS Q 373 0.10 SIDE CHAIN REMARK 500 ARG Q 435 0.20 SIDE CHAIN REMARK 500 TYR Q 452 0.14 SIDE CHAIN REMARK 500 ARG Q 506 0.17 SIDE CHAIN REMARK 500 ARG Q 535 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-5450 RELATED DB: EMDB REMARK 900 RELATED ID: TEMIMPS-GO.15206 RELATED DB: TARGETTRACK DBREF 3J1Z P 1 296 UNP Q8E919 Q8E919_SHEON 1 296 DBREF 3J1Z Q 297 592 UNP Q8E919 Q8E919_SHEON 1 296 SEQADV 3J1Z HIS P 297 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 298 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 299 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 300 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 301 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 302 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 303 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 304 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 305 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS P 306 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 593 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 594 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 595 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 596 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 597 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 598 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 599 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 600 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 601 UNP Q8E919 EXPRESSION TAG SEQADV 3J1Z HIS Q 602 UNP Q8E919 EXPRESSION TAG SEQRES 1 P 306 MET THR GLN THR SER GLN TYR ASP PHE TRP VAL LYS LEU SEQRES 2 P 306 ALA SER ARG ALA SER VAL ALA THR ALA LEU THR LEU ILE SEQRES 3 P 306 THR ILE LYS LEU LEU ALA TRP LEU TYR SER GLY SER ALA SEQRES 4 P 306 SER MET LEU ALA SER LEU THR ASP SER PHE ALA ASP THR SEQRES 5 P 306 LEU ALA SER ILE ILE ASN PHE ILE ALA ILE ARG TYR ALA SEQRES 6 P 306 ILE VAL PRO ALA ASP HIS ASP HIS ARG TYR GLY HIS GLY SEQRES 7 P 306 LYS ALA GLU PRO LEU ALA ALA LEU ALA GLN SER ALA PHE SEQRES 8 P 306 ILE MET GLY SER ALA PHE LEU LEU LEU PHE TYR GLY GLY SEQRES 9 P 306 GLU ARG LEU LEU ASN PRO SER PRO VAL GLU ASN ALA THR SEQRES 10 P 306 LEU GLY VAL VAL VAL SER VAL VAL ALA ILE VAL LEU THR SEQRES 11 P 306 LEU ALA LEU VAL LEU LEU GLN LYS ARG ALA LEU ALA ALA SEQRES 12 P 306 THR ASN SER THR VAL VAL GLU ALA ASP SER LEU HIS TYR SEQRES 13 P 306 LYS SER ASP LEU PHE LEU ASN ALA ALA VAL LEU LEU ALA SEQRES 14 P 306 LEU VAL LEU SER GLN TYR GLY TRP TRP TRP ALA ASP GLY SEQRES 15 P 306 LEU PHE ALA VAL LEU ILE ALA CYS TYR ILE GLY GLN GLN SEQRES 16 P 306 ALA PHE ASP LEU GLY TYR ARG SER ILE GLN ALA LEU LEU SEQRES 17 P 306 ASP ARG GLU LEU ASP GLU ASP THR ARG GLN ARG ILE LYS SEQRES 18 P 306 LEU ILE ALA LYS GLU ASP PRO ARG VAL LEU GLY LEU HIS SEQRES 19 P 306 ASP LEU ARG THR ARG GLN ALA GLY LYS THR VAL PHE ILE SEQRES 20 P 306 GLN PHE HIS LEU GLU LEU ASP GLY ASN LEU SER LEU ASN SEQRES 21 P 306 GLU ALA HIS SER ILE THR ASP THR THR GLY LEU ARG VAL SEQRES 22 P 306 LYS ALA ALA PHE GLU ASP ALA GLU VAL ILE ILE HIS GLN SEQRES 23 P 306 ASP PRO VAL GLN VAL GLU PRO THR THR GLN HIS HIS HIS SEQRES 24 P 306 HIS HIS HIS HIS HIS HIS HIS SEQRES 1 Q 306 MET THR GLN THR SER GLN TYR ASP PHE TRP VAL LYS LEU SEQRES 2 Q 306 ALA SER ARG ALA SER VAL ALA THR ALA LEU THR LEU ILE SEQRES 3 Q 306 THR ILE LYS LEU LEU ALA TRP LEU TYR SER GLY SER ALA SEQRES 4 Q 306 SER MET LEU ALA SER LEU THR ASP SER PHE ALA ASP THR SEQRES 5 Q 306 LEU ALA SER ILE ILE ASN PHE ILE ALA ILE ARG TYR ALA SEQRES 6 Q 306 ILE VAL PRO ALA ASP HIS ASP HIS ARG TYR GLY HIS GLY SEQRES 7 Q 306 LYS ALA GLU PRO LEU ALA ALA LEU ALA GLN SER ALA PHE SEQRES 8 Q 306 ILE MET GLY SER ALA PHE LEU LEU LEU PHE TYR GLY GLY SEQRES 9 Q 306 GLU ARG LEU LEU ASN PRO SER PRO VAL GLU ASN ALA THR SEQRES 10 Q 306 LEU GLY VAL VAL VAL SER VAL VAL ALA ILE VAL LEU THR SEQRES 11 Q 306 LEU ALA LEU VAL LEU LEU GLN LYS ARG ALA LEU ALA ALA SEQRES 12 Q 306 THR ASN SER THR VAL VAL GLU ALA ASP SER LEU HIS TYR SEQRES 13 Q 306 LYS SER ASP LEU PHE LEU ASN ALA ALA VAL LEU LEU ALA SEQRES 14 Q 306 LEU VAL LEU SER GLN TYR GLY TRP TRP TRP ALA ASP GLY SEQRES 15 Q 306 LEU PHE ALA VAL LEU ILE ALA CYS TYR ILE GLY GLN GLN SEQRES 16 Q 306 ALA PHE ASP LEU GLY TYR ARG SER ILE GLN ALA LEU LEU SEQRES 17 Q 306 ASP ARG GLU LEU ASP GLU ASP THR ARG GLN ARG ILE LYS SEQRES 18 Q 306 LEU ILE ALA LYS GLU ASP PRO ARG VAL LEU GLY LEU HIS SEQRES 19 Q 306 ASP LEU ARG THR ARG GLN ALA GLY LYS THR VAL PHE ILE SEQRES 20 Q 306 GLN PHE HIS LEU GLU LEU ASP GLY ASN LEU SER LEU ASN SEQRES 21 Q 306 GLU ALA HIS SER ILE THR ASP THR THR GLY LEU ARG VAL SEQRES 22 Q 306 LYS ALA ALA PHE GLU ASP ALA GLU VAL ILE ILE HIS GLN SEQRES 23 Q 306 ASP PRO VAL GLN VAL GLU PRO THR THR GLN HIS HIS HIS SEQRES 24 Q 306 HIS HIS HIS HIS HIS HIS HIS HELIX 1 1 ALA P 14 ILE P 26 1 13 HELIX 2 2 ILE P 26 ALA P 32 1 7 HELIX 3 3 ALA P 43 SER P 48 1 6 HELIX 4 4 PHE P 49 ILE P 66 1 18 HELIX 5 5 LYS P 79 ARG P 106 1 28 HELIX 6 6 GLY P 119 ALA P 142 1 24 HELIX 7 7 SER P 146 LEU P 160 1 15 HELIX 8 8 ALA P 180 LEU P 208 1 29 HELIX 9 9 ASP P 213 ASP P 227 1 15 HELIX 10 10 SER P 258 PHE P 277 1 20 HELIX 11 11 ALA Q 310 LEU Q 321 1 12 HELIX 12 12 LEU Q 321 LEU Q 327 1 7 HELIX 13 13 LEU Q 338 ASP Q 343 1 6 HELIX 14 14 ASP Q 343 VAL Q 363 1 21 HELIX 15 15 GLY Q 372 GLY Q 374 5 3 HELIX 16 16 LYS Q 375 ARG Q 402 1 28 HELIX 17 17 VAL Q 416 THR Q 440 1 25 HELIX 18 18 GLU Q 446 PHE Q 457 1 12 HELIX 19 19 ASP Q 477 LEU Q 504 1 28 HELIX 20 20 GLU Q 510 ALA Q 520 1 11 HELIX 21 21 SER Q 554 PHE Q 573 1 20 SHEET 1 A 3 ARG P 239 ALA P 241 0 SHEET 2 A 3 THR P 244 PHE P 249 -1 O PHE P 246 N ARG P 239 SHEET 3 A 3 GLU P 281 ILE P 284 1 O GLU P 281 N ILE P 247 SHEET 1 B 2 GLU P 252 LEU P 253 0 SHEET 2 B 2 ASP P 287 PRO P 288 1 O ASP P 287 N LEU P 253 SHEET 1 C 3 ARG Q 533 GLN Q 536 0 SHEET 2 C 3 VAL Q 541 PHE Q 545 -1 O PHE Q 542 N ARG Q 535 SHEET 3 C 3 GLU Q 577 ILE Q 580 1 O GLU Q 577 N ILE Q 543 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000