data_3J89 # _entry.id 3J89 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3J89 pdb_00003j89 10.2210/pdb3j89/pdb RCSB RCSB160375 ? ? WWPDB D_1000160375 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-11 2 'Structure model' 1 1 2015-02-18 3 'Structure model' 1 2 2018-07-18 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' em_single_particle_entity 2 3 'Structure model' em_software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.image_processing_id' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J89 _pdbx_database_status.recvd_initial_deposition_date 2014-10-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-6123 _pdbx_database_related.content_type 'associated EM volume' _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Egelman, E.H.' 1 'Xu, C.' 2 'DiMaio, F.' 3 'Magnotti, E.' 4 'Modlin, C.' 5 'Yu, X.' 6 'Wright, E.' 7 'Baker, D.' 8 'Conticello, V.P.' 9 # _citation.id primary _citation.title 'Structural plasticity of helical nanotubes based on coiled-coil assemblies.' _citation.journal_abbrev Structure _citation.journal_volume 23 _citation.page_first 280 _citation.page_last 289 _citation.year 2015 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25620001 _citation.pdbx_database_id_DOI 10.1016/j.str.2014.12.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Egelman, E.H.' 1 ? primary 'Xu, C.' 2 ? primary 'DiMaio, F.' 3 ? primary 'Magnotti, E.' 4 ? primary 'Modlin, C.' 5 ? primary 'Yu, X.' 6 ? primary 'Wright, E.' 7 ? primary 'Baker, D.' 8 ? primary 'Conticello, V.P.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'synthetic peptide' _entity.formula_weight 3309.797 _entity.pdbx_number_of_molecules 19 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code QARILEADAEILRAYARILEAHAEILRAQ _entity_poly.pdbx_seq_one_letter_code_can QARILEADAEILRAYARILEAHAEILRAQ _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 ARG n 1 4 ILE n 1 5 LEU n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 ALA n 1 10 GLU n 1 11 ILE n 1 12 LEU n 1 13 ARG n 1 14 ALA n 1 15 TYR n 1 16 ALA n 1 17 ARG n 1 18 ILE n 1 19 LEU n 1 20 GLU n 1 21 ALA n 1 22 HIS n 1 23 ALA n 1 24 GLU n 1 25 ILE n 1 26 LEU n 1 27 ARG n 1 28 ALA n 1 29 GLN n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLN 29 29 29 GLN GLN A . n B 1 1 GLN 1 1 1 GLN GLN B . n B 1 2 ALA 2 2 2 ALA ALA B . n B 1 3 ARG 3 3 3 ARG ARG B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 ALA 7 7 7 ALA ALA B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 ALA 9 9 9 ALA ALA B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 TYR 15 15 15 TYR TYR B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 HIS 22 22 22 HIS HIS B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 GLN 29 29 29 GLN GLN B . n C 1 1 GLN 1 1 1 GLN GLN C . n C 1 2 ALA 2 2 2 ALA ALA C . n C 1 3 ARG 3 3 3 ARG ARG C . n C 1 4 ILE 4 4 4 ILE ILE C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 GLU 6 6 6 GLU GLU C . n C 1 7 ALA 7 7 7 ALA ALA C . n C 1 8 ASP 8 8 8 ASP ASP C . n C 1 9 ALA 9 9 9 ALA ALA C . n C 1 10 GLU 10 10 10 GLU GLU C . n C 1 11 ILE 11 11 11 ILE ILE C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 ARG 13 13 13 ARG ARG C . n C 1 14 ALA 14 14 14 ALA ALA C . n C 1 15 TYR 15 15 15 TYR TYR C . n C 1 16 ALA 16 16 16 ALA ALA C . n C 1 17 ARG 17 17 17 ARG ARG C . n C 1 18 ILE 18 18 18 ILE ILE C . n C 1 19 LEU 19 19 19 LEU LEU C . n C 1 20 GLU 20 20 20 GLU GLU C . n C 1 21 ALA 21 21 21 ALA ALA C . n C 1 22 HIS 22 22 22 HIS HIS C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 GLU 24 24 24 GLU GLU C . n C 1 25 ILE 25 25 25 ILE ILE C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 ARG 27 27 27 ARG ARG C . n C 1 28 ALA 28 28 28 ALA ALA C . n C 1 29 GLN 29 29 29 GLN GLN C . n D 1 1 GLN 1 1 1 GLN GLN D . n D 1 2 ALA 2 2 2 ALA ALA D . n D 1 3 ARG 3 3 3 ARG ARG D . n D 1 4 ILE 4 4 4 ILE ILE D . n D 1 5 LEU 5 5 5 LEU LEU D . n D 1 6 GLU 6 6 6 GLU GLU D . n D 1 7 ALA 7 7 7 ALA ALA D . n D 1 8 ASP 8 8 8 ASP ASP D . n D 1 9 ALA 9 9 9 ALA ALA D . n D 1 10 GLU 10 10 10 GLU GLU D . n D 1 11 ILE 11 11 11 ILE ILE D . n D 1 12 LEU 12 12 12 LEU LEU D . n D 1 13 ARG 13 13 13 ARG ARG D . n D 1 14 ALA 14 14 14 ALA ALA D . n D 1 15 TYR 15 15 15 TYR TYR D . n D 1 16 ALA 16 16 16 ALA ALA D . n D 1 17 ARG 17 17 17 ARG ARG D . n D 1 18 ILE 18 18 18 ILE ILE D . n D 1 19 LEU 19 19 19 LEU LEU D . n D 1 20 GLU 20 20 20 GLU GLU D . n D 1 21 ALA 21 21 21 ALA ALA D . n D 1 22 HIS 22 22 22 HIS HIS D . n D 1 23 ALA 23 23 23 ALA ALA D . n D 1 24 GLU 24 24 24 GLU GLU D . n D 1 25 ILE 25 25 25 ILE ILE D . n D 1 26 LEU 26 26 26 LEU LEU D . n D 1 27 ARG 27 27 27 ARG ARG D . n D 1 28 ALA 28 28 28 ALA ALA D . n D 1 29 GLN 29 29 29 GLN GLN D . n E 1 1 GLN 1 1 1 GLN GLN E . n E 1 2 ALA 2 2 2 ALA ALA E . n E 1 3 ARG 3 3 3 ARG ARG E . n E 1 4 ILE 4 4 4 ILE ILE E . n E 1 5 LEU 5 5 5 LEU LEU E . n E 1 6 GLU 6 6 6 GLU GLU E . n E 1 7 ALA 7 7 7 ALA ALA E . n E 1 8 ASP 8 8 8 ASP ASP E . n E 1 9 ALA 9 9 9 ALA ALA E . n E 1 10 GLU 10 10 10 GLU GLU E . n E 1 11 ILE 11 11 11 ILE ILE E . n E 1 12 LEU 12 12 12 LEU LEU E . n E 1 13 ARG 13 13 13 ARG ARG E . n E 1 14 ALA 14 14 14 ALA ALA E . n E 1 15 TYR 15 15 15 TYR TYR E . n E 1 16 ALA 16 16 16 ALA ALA E . n E 1 17 ARG 17 17 17 ARG ARG E . n E 1 18 ILE 18 18 18 ILE ILE E . n E 1 19 LEU 19 19 19 LEU LEU E . n E 1 20 GLU 20 20 20 GLU GLU E . n E 1 21 ALA 21 21 21 ALA ALA E . n E 1 22 HIS 22 22 22 HIS HIS E . n E 1 23 ALA 23 23 23 ALA ALA E . n E 1 24 GLU 24 24 24 GLU GLU E . n E 1 25 ILE 25 25 25 ILE ILE E . n E 1 26 LEU 26 26 26 LEU LEU E . n E 1 27 ARG 27 27 27 ARG ARG E . n E 1 28 ALA 28 28 28 ALA ALA E . n E 1 29 GLN 29 29 29 GLN GLN E . n F 1 1 GLN 1 1 1 GLN GLN F . n F 1 2 ALA 2 2 2 ALA ALA F . n F 1 3 ARG 3 3 3 ARG ARG F . n F 1 4 ILE 4 4 4 ILE ILE F . n F 1 5 LEU 5 5 5 LEU LEU F . n F 1 6 GLU 6 6 6 GLU GLU F . n F 1 7 ALA 7 7 7 ALA ALA F . n F 1 8 ASP 8 8 8 ASP ASP F . n F 1 9 ALA 9 9 9 ALA ALA F . n F 1 10 GLU 10 10 10 GLU GLU F . n F 1 11 ILE 11 11 11 ILE ILE F . n F 1 12 LEU 12 12 12 LEU LEU F . n F 1 13 ARG 13 13 13 ARG ARG F . n F 1 14 ALA 14 14 14 ALA ALA F . n F 1 15 TYR 15 15 15 TYR TYR F . n F 1 16 ALA 16 16 16 ALA ALA F . n F 1 17 ARG 17 17 17 ARG ARG F . n F 1 18 ILE 18 18 18 ILE ILE F . n F 1 19 LEU 19 19 19 LEU LEU F . n F 1 20 GLU 20 20 20 GLU GLU F . n F 1 21 ALA 21 21 21 ALA ALA F . n F 1 22 HIS 22 22 22 HIS HIS F . n F 1 23 ALA 23 23 23 ALA ALA F . n F 1 24 GLU 24 24 24 GLU GLU F . n F 1 25 ILE 25 25 25 ILE ILE F . n F 1 26 LEU 26 26 26 LEU LEU F . n F 1 27 ARG 27 27 27 ARG ARG F . n F 1 28 ALA 28 28 28 ALA ALA F . n F 1 29 GLN 29 29 29 GLN GLN F . n G 1 1 GLN 1 1 1 GLN GLN G . n G 1 2 ALA 2 2 2 ALA ALA G . n G 1 3 ARG 3 3 3 ARG ARG G . n G 1 4 ILE 4 4 4 ILE ILE G . n G 1 5 LEU 5 5 5 LEU LEU G . n G 1 6 GLU 6 6 6 GLU GLU G . n G 1 7 ALA 7 7 7 ALA ALA G . n G 1 8 ASP 8 8 8 ASP ASP G . n G 1 9 ALA 9 9 9 ALA ALA G . n G 1 10 GLU 10 10 10 GLU GLU G . n G 1 11 ILE 11 11 11 ILE ILE G . n G 1 12 LEU 12 12 12 LEU LEU G . n G 1 13 ARG 13 13 13 ARG ARG G . n G 1 14 ALA 14 14 14 ALA ALA G . n G 1 15 TYR 15 15 15 TYR TYR G . n G 1 16 ALA 16 16 16 ALA ALA G . n G 1 17 ARG 17 17 17 ARG ARG G . n G 1 18 ILE 18 18 18 ILE ILE G . n G 1 19 LEU 19 19 19 LEU LEU G . n G 1 20 GLU 20 20 20 GLU GLU G . n G 1 21 ALA 21 21 21 ALA ALA G . n G 1 22 HIS 22 22 22 HIS HIS G . n G 1 23 ALA 23 23 23 ALA ALA G . n G 1 24 GLU 24 24 24 GLU GLU G . n G 1 25 ILE 25 25 25 ILE ILE G . n G 1 26 LEU 26 26 26 LEU LEU G . n G 1 27 ARG 27 27 27 ARG ARG G . n G 1 28 ALA 28 28 28 ALA ALA G . n G 1 29 GLN 29 29 29 GLN GLN G . n H 1 1 GLN 1 1 1 GLN GLN H . n H 1 2 ALA 2 2 2 ALA ALA H . n H 1 3 ARG 3 3 3 ARG ARG H . n H 1 4 ILE 4 4 4 ILE ILE H . n H 1 5 LEU 5 5 5 LEU LEU H . n H 1 6 GLU 6 6 6 GLU GLU H . n H 1 7 ALA 7 7 7 ALA ALA H . n H 1 8 ASP 8 8 8 ASP ASP H . n H 1 9 ALA 9 9 9 ALA ALA H . n H 1 10 GLU 10 10 10 GLU GLU H . n H 1 11 ILE 11 11 11 ILE ILE H . n H 1 12 LEU 12 12 12 LEU LEU H . n H 1 13 ARG 13 13 13 ARG ARG H . n H 1 14 ALA 14 14 14 ALA ALA H . n H 1 15 TYR 15 15 15 TYR TYR H . n H 1 16 ALA 16 16 16 ALA ALA H . n H 1 17 ARG 17 17 17 ARG ARG H . n H 1 18 ILE 18 18 18 ILE ILE H . n H 1 19 LEU 19 19 19 LEU LEU H . n H 1 20 GLU 20 20 20 GLU GLU H . n H 1 21 ALA 21 21 21 ALA ALA H . n H 1 22 HIS 22 22 22 HIS HIS H . n H 1 23 ALA 23 23 23 ALA ALA H . n H 1 24 GLU 24 24 24 GLU GLU H . n H 1 25 ILE 25 25 25 ILE ILE H . n H 1 26 LEU 26 26 26 LEU LEU H . n H 1 27 ARG 27 27 27 ARG ARG H . n H 1 28 ALA 28 28 28 ALA ALA H . n H 1 29 GLN 29 29 29 GLN GLN H . n I 1 1 GLN 1 1 1 GLN GLN I . n I 1 2 ALA 2 2 2 ALA ALA I . n I 1 3 ARG 3 3 3 ARG ARG I . n I 1 4 ILE 4 4 4 ILE ILE I . n I 1 5 LEU 5 5 5 LEU LEU I . n I 1 6 GLU 6 6 6 GLU GLU I . n I 1 7 ALA 7 7 7 ALA ALA I . n I 1 8 ASP 8 8 8 ASP ASP I . n I 1 9 ALA 9 9 9 ALA ALA I . n I 1 10 GLU 10 10 10 GLU GLU I . n I 1 11 ILE 11 11 11 ILE ILE I . n I 1 12 LEU 12 12 12 LEU LEU I . n I 1 13 ARG 13 13 13 ARG ARG I . n I 1 14 ALA 14 14 14 ALA ALA I . n I 1 15 TYR 15 15 15 TYR TYR I . n I 1 16 ALA 16 16 16 ALA ALA I . n I 1 17 ARG 17 17 17 ARG ARG I . n I 1 18 ILE 18 18 18 ILE ILE I . n I 1 19 LEU 19 19 19 LEU LEU I . n I 1 20 GLU 20 20 20 GLU GLU I . n I 1 21 ALA 21 21 21 ALA ALA I . n I 1 22 HIS 22 22 22 HIS HIS I . n I 1 23 ALA 23 23 23 ALA ALA I . n I 1 24 GLU 24 24 24 GLU GLU I . n I 1 25 ILE 25 25 25 ILE ILE I . n I 1 26 LEU 26 26 26 LEU LEU I . n I 1 27 ARG 27 27 27 ARG ARG I . n I 1 28 ALA 28 28 28 ALA ALA I . n I 1 29 GLN 29 29 29 GLN GLN I . n J 1 1 GLN 1 1 1 GLN GLN J . n J 1 2 ALA 2 2 2 ALA ALA J . n J 1 3 ARG 3 3 3 ARG ARG J . n J 1 4 ILE 4 4 4 ILE ILE J . n J 1 5 LEU 5 5 5 LEU LEU J . n J 1 6 GLU 6 6 6 GLU GLU J . n J 1 7 ALA 7 7 7 ALA ALA J . n J 1 8 ASP 8 8 8 ASP ASP J . n J 1 9 ALA 9 9 9 ALA ALA J . n J 1 10 GLU 10 10 10 GLU GLU J . n J 1 11 ILE 11 11 11 ILE ILE J . n J 1 12 LEU 12 12 12 LEU LEU J . n J 1 13 ARG 13 13 13 ARG ARG J . n J 1 14 ALA 14 14 14 ALA ALA J . n J 1 15 TYR 15 15 15 TYR TYR J . n J 1 16 ALA 16 16 16 ALA ALA J . n J 1 17 ARG 17 17 17 ARG ARG J . n J 1 18 ILE 18 18 18 ILE ILE J . n J 1 19 LEU 19 19 19 LEU LEU J . n J 1 20 GLU 20 20 20 GLU GLU J . n J 1 21 ALA 21 21 21 ALA ALA J . n J 1 22 HIS 22 22 22 HIS HIS J . n J 1 23 ALA 23 23 23 ALA ALA J . n J 1 24 GLU 24 24 24 GLU GLU J . n J 1 25 ILE 25 25 25 ILE ILE J . n J 1 26 LEU 26 26 26 LEU LEU J . n J 1 27 ARG 27 27 27 ARG ARG J . n J 1 28 ALA 28 28 28 ALA ALA J . n J 1 29 GLN 29 29 29 GLN GLN J . n K 1 1 GLN 1 1 1 GLN GLN K . n K 1 2 ALA 2 2 2 ALA ALA K . n K 1 3 ARG 3 3 3 ARG ARG K . n K 1 4 ILE 4 4 4 ILE ILE K . n K 1 5 LEU 5 5 5 LEU LEU K . n K 1 6 GLU 6 6 6 GLU GLU K . n K 1 7 ALA 7 7 7 ALA ALA K . n K 1 8 ASP 8 8 8 ASP ASP K . n K 1 9 ALA 9 9 9 ALA ALA K . n K 1 10 GLU 10 10 10 GLU GLU K . n K 1 11 ILE 11 11 11 ILE ILE K . n K 1 12 LEU 12 12 12 LEU LEU K . n K 1 13 ARG 13 13 13 ARG ARG K . n K 1 14 ALA 14 14 14 ALA ALA K . n K 1 15 TYR 15 15 15 TYR TYR K . n K 1 16 ALA 16 16 16 ALA ALA K . n K 1 17 ARG 17 17 17 ARG ARG K . n K 1 18 ILE 18 18 18 ILE ILE K . n K 1 19 LEU 19 19 19 LEU LEU K . n K 1 20 GLU 20 20 20 GLU GLU K . n K 1 21 ALA 21 21 21 ALA ALA K . n K 1 22 HIS 22 22 22 HIS HIS K . n K 1 23 ALA 23 23 23 ALA ALA K . n K 1 24 GLU 24 24 24 GLU GLU K . n K 1 25 ILE 25 25 25 ILE ILE K . n K 1 26 LEU 26 26 26 LEU LEU K . n K 1 27 ARG 27 27 27 ARG ARG K . n K 1 28 ALA 28 28 28 ALA ALA K . n K 1 29 GLN 29 29 29 GLN GLN K . n L 1 1 GLN 1 1 1 GLN GLN L . n L 1 2 ALA 2 2 2 ALA ALA L . n L 1 3 ARG 3 3 3 ARG ARG L . n L 1 4 ILE 4 4 4 ILE ILE L . n L 1 5 LEU 5 5 5 LEU LEU L . n L 1 6 GLU 6 6 6 GLU GLU L . n L 1 7 ALA 7 7 7 ALA ALA L . n L 1 8 ASP 8 8 8 ASP ASP L . n L 1 9 ALA 9 9 9 ALA ALA L . n L 1 10 GLU 10 10 10 GLU GLU L . n L 1 11 ILE 11 11 11 ILE ILE L . n L 1 12 LEU 12 12 12 LEU LEU L . n L 1 13 ARG 13 13 13 ARG ARG L . n L 1 14 ALA 14 14 14 ALA ALA L . n L 1 15 TYR 15 15 15 TYR TYR L . n L 1 16 ALA 16 16 16 ALA ALA L . n L 1 17 ARG 17 17 17 ARG ARG L . n L 1 18 ILE 18 18 18 ILE ILE L . n L 1 19 LEU 19 19 19 LEU LEU L . n L 1 20 GLU 20 20 20 GLU GLU L . n L 1 21 ALA 21 21 21 ALA ALA L . n L 1 22 HIS 22 22 22 HIS HIS L . n L 1 23 ALA 23 23 23 ALA ALA L . n L 1 24 GLU 24 24 24 GLU GLU L . n L 1 25 ILE 25 25 25 ILE ILE L . n L 1 26 LEU 26 26 26 LEU LEU L . n L 1 27 ARG 27 27 27 ARG ARG L . n L 1 28 ALA 28 28 28 ALA ALA L . n L 1 29 GLN 29 29 29 GLN GLN L . n M 1 1 GLN 1 1 1 GLN GLN M . n M 1 2 ALA 2 2 2 ALA ALA M . n M 1 3 ARG 3 3 3 ARG ARG M . n M 1 4 ILE 4 4 4 ILE ILE M . n M 1 5 LEU 5 5 5 LEU LEU M . n M 1 6 GLU 6 6 6 GLU GLU M . n M 1 7 ALA 7 7 7 ALA ALA M . n M 1 8 ASP 8 8 8 ASP ASP M . n M 1 9 ALA 9 9 9 ALA ALA M . n M 1 10 GLU 10 10 10 GLU GLU M . n M 1 11 ILE 11 11 11 ILE ILE M . n M 1 12 LEU 12 12 12 LEU LEU M . n M 1 13 ARG 13 13 13 ARG ARG M . n M 1 14 ALA 14 14 14 ALA ALA M . n M 1 15 TYR 15 15 15 TYR TYR M . n M 1 16 ALA 16 16 16 ALA ALA M . n M 1 17 ARG 17 17 17 ARG ARG M . n M 1 18 ILE 18 18 18 ILE ILE M . n M 1 19 LEU 19 19 19 LEU LEU M . n M 1 20 GLU 20 20 20 GLU GLU M . n M 1 21 ALA 21 21 21 ALA ALA M . n M 1 22 HIS 22 22 22 HIS HIS M . n M 1 23 ALA 23 23 23 ALA ALA M . n M 1 24 GLU 24 24 24 GLU GLU M . n M 1 25 ILE 25 25 25 ILE ILE M . n M 1 26 LEU 26 26 26 LEU LEU M . n M 1 27 ARG 27 27 27 ARG ARG M . n M 1 28 ALA 28 28 28 ALA ALA M . n M 1 29 GLN 29 29 29 GLN GLN M . n N 1 1 GLN 1 1 1 GLN GLN N . n N 1 2 ALA 2 2 2 ALA ALA N . n N 1 3 ARG 3 3 3 ARG ARG N . n N 1 4 ILE 4 4 4 ILE ILE N . n N 1 5 LEU 5 5 5 LEU LEU N . n N 1 6 GLU 6 6 6 GLU GLU N . n N 1 7 ALA 7 7 7 ALA ALA N . n N 1 8 ASP 8 8 8 ASP ASP N . n N 1 9 ALA 9 9 9 ALA ALA N . n N 1 10 GLU 10 10 10 GLU GLU N . n N 1 11 ILE 11 11 11 ILE ILE N . n N 1 12 LEU 12 12 12 LEU LEU N . n N 1 13 ARG 13 13 13 ARG ARG N . n N 1 14 ALA 14 14 14 ALA ALA N . n N 1 15 TYR 15 15 15 TYR TYR N . n N 1 16 ALA 16 16 16 ALA ALA N . n N 1 17 ARG 17 17 17 ARG ARG N . n N 1 18 ILE 18 18 18 ILE ILE N . n N 1 19 LEU 19 19 19 LEU LEU N . n N 1 20 GLU 20 20 20 GLU GLU N . n N 1 21 ALA 21 21 21 ALA ALA N . n N 1 22 HIS 22 22 22 HIS HIS N . n N 1 23 ALA 23 23 23 ALA ALA N . n N 1 24 GLU 24 24 24 GLU GLU N . n N 1 25 ILE 25 25 25 ILE ILE N . n N 1 26 LEU 26 26 26 LEU LEU N . n N 1 27 ARG 27 27 27 ARG ARG N . n N 1 28 ALA 28 28 28 ALA ALA N . n N 1 29 GLN 29 29 29 GLN GLN N . n O 1 1 GLN 1 1 1 GLN GLN O . n O 1 2 ALA 2 2 2 ALA ALA O . n O 1 3 ARG 3 3 3 ARG ARG O . n O 1 4 ILE 4 4 4 ILE ILE O . n O 1 5 LEU 5 5 5 LEU LEU O . n O 1 6 GLU 6 6 6 GLU GLU O . n O 1 7 ALA 7 7 7 ALA ALA O . n O 1 8 ASP 8 8 8 ASP ASP O . n O 1 9 ALA 9 9 9 ALA ALA O . n O 1 10 GLU 10 10 10 GLU GLU O . n O 1 11 ILE 11 11 11 ILE ILE O . n O 1 12 LEU 12 12 12 LEU LEU O . n O 1 13 ARG 13 13 13 ARG ARG O . n O 1 14 ALA 14 14 14 ALA ALA O . n O 1 15 TYR 15 15 15 TYR TYR O . n O 1 16 ALA 16 16 16 ALA ALA O . n O 1 17 ARG 17 17 17 ARG ARG O . n O 1 18 ILE 18 18 18 ILE ILE O . n O 1 19 LEU 19 19 19 LEU LEU O . n O 1 20 GLU 20 20 20 GLU GLU O . n O 1 21 ALA 21 21 21 ALA ALA O . n O 1 22 HIS 22 22 22 HIS HIS O . n O 1 23 ALA 23 23 23 ALA ALA O . n O 1 24 GLU 24 24 24 GLU GLU O . n O 1 25 ILE 25 25 25 ILE ILE O . n O 1 26 LEU 26 26 26 LEU LEU O . n O 1 27 ARG 27 27 27 ARG ARG O . n O 1 28 ALA 28 28 28 ALA ALA O . n O 1 29 GLN 29 29 29 GLN GLN O . n P 1 1 GLN 1 1 1 GLN GLN P . n P 1 2 ALA 2 2 2 ALA ALA P . n P 1 3 ARG 3 3 3 ARG ARG P . n P 1 4 ILE 4 4 4 ILE ILE P . n P 1 5 LEU 5 5 5 LEU LEU P . n P 1 6 GLU 6 6 6 GLU GLU P . n P 1 7 ALA 7 7 7 ALA ALA P . n P 1 8 ASP 8 8 8 ASP ASP P . n P 1 9 ALA 9 9 9 ALA ALA P . n P 1 10 GLU 10 10 10 GLU GLU P . n P 1 11 ILE 11 11 11 ILE ILE P . n P 1 12 LEU 12 12 12 LEU LEU P . n P 1 13 ARG 13 13 13 ARG ARG P . n P 1 14 ALA 14 14 14 ALA ALA P . n P 1 15 TYR 15 15 15 TYR TYR P . n P 1 16 ALA 16 16 16 ALA ALA P . n P 1 17 ARG 17 17 17 ARG ARG P . n P 1 18 ILE 18 18 18 ILE ILE P . n P 1 19 LEU 19 19 19 LEU LEU P . n P 1 20 GLU 20 20 20 GLU GLU P . n P 1 21 ALA 21 21 21 ALA ALA P . n P 1 22 HIS 22 22 22 HIS HIS P . n P 1 23 ALA 23 23 23 ALA ALA P . n P 1 24 GLU 24 24 24 GLU GLU P . n P 1 25 ILE 25 25 25 ILE ILE P . n P 1 26 LEU 26 26 26 LEU LEU P . n P 1 27 ARG 27 27 27 ARG ARG P . n P 1 28 ALA 28 28 28 ALA ALA P . n P 1 29 GLN 29 29 29 GLN GLN P . n Q 1 1 GLN 1 1 1 GLN GLN Q . n Q 1 2 ALA 2 2 2 ALA ALA Q . n Q 1 3 ARG 3 3 3 ARG ARG Q . n Q 1 4 ILE 4 4 4 ILE ILE Q . n Q 1 5 LEU 5 5 5 LEU LEU Q . n Q 1 6 GLU 6 6 6 GLU GLU Q . n Q 1 7 ALA 7 7 7 ALA ALA Q . n Q 1 8 ASP 8 8 8 ASP ASP Q . n Q 1 9 ALA 9 9 9 ALA ALA Q . n Q 1 10 GLU 10 10 10 GLU GLU Q . n Q 1 11 ILE 11 11 11 ILE ILE Q . n Q 1 12 LEU 12 12 12 LEU LEU Q . n Q 1 13 ARG 13 13 13 ARG ARG Q . n Q 1 14 ALA 14 14 14 ALA ALA Q . n Q 1 15 TYR 15 15 15 TYR TYR Q . n Q 1 16 ALA 16 16 16 ALA ALA Q . n Q 1 17 ARG 17 17 17 ARG ARG Q . n Q 1 18 ILE 18 18 18 ILE ILE Q . n Q 1 19 LEU 19 19 19 LEU LEU Q . n Q 1 20 GLU 20 20 20 GLU GLU Q . n Q 1 21 ALA 21 21 21 ALA ALA Q . n Q 1 22 HIS 22 22 22 HIS HIS Q . n Q 1 23 ALA 23 23 23 ALA ALA Q . n Q 1 24 GLU 24 24 24 GLU GLU Q . n Q 1 25 ILE 25 25 25 ILE ILE Q . n Q 1 26 LEU 26 26 26 LEU LEU Q . n Q 1 27 ARG 27 27 27 ARG ARG Q . n Q 1 28 ALA 28 28 28 ALA ALA Q . n Q 1 29 GLN 29 29 29 GLN GLN Q . n R 1 1 GLN 1 1 1 GLN GLN R . n R 1 2 ALA 2 2 2 ALA ALA R . n R 1 3 ARG 3 3 3 ARG ARG R . n R 1 4 ILE 4 4 4 ILE ILE R . n R 1 5 LEU 5 5 5 LEU LEU R . n R 1 6 GLU 6 6 6 GLU GLU R . n R 1 7 ALA 7 7 7 ALA ALA R . n R 1 8 ASP 8 8 8 ASP ASP R . n R 1 9 ALA 9 9 9 ALA ALA R . n R 1 10 GLU 10 10 10 GLU GLU R . n R 1 11 ILE 11 11 11 ILE ILE R . n R 1 12 LEU 12 12 12 LEU LEU R . n R 1 13 ARG 13 13 13 ARG ARG R . n R 1 14 ALA 14 14 14 ALA ALA R . n R 1 15 TYR 15 15 15 TYR TYR R . n R 1 16 ALA 16 16 16 ALA ALA R . n R 1 17 ARG 17 17 17 ARG ARG R . n R 1 18 ILE 18 18 18 ILE ILE R . n R 1 19 LEU 19 19 19 LEU LEU R . n R 1 20 GLU 20 20 20 GLU GLU R . n R 1 21 ALA 21 21 21 ALA ALA R . n R 1 22 HIS 22 22 22 HIS HIS R . n R 1 23 ALA 23 23 23 ALA ALA R . n R 1 24 GLU 24 24 24 GLU GLU R . n R 1 25 ILE 25 25 25 ILE ILE R . n R 1 26 LEU 26 26 26 LEU LEU R . n R 1 27 ARG 27 27 27 ARG ARG R . n R 1 28 ALA 28 28 28 ALA ALA R . n R 1 29 GLN 29 29 29 GLN GLN R . n S 1 1 GLN 1 1 1 GLN GLN S . n S 1 2 ALA 2 2 2 ALA ALA S . n S 1 3 ARG 3 3 3 ARG ARG S . n S 1 4 ILE 4 4 4 ILE ILE S . n S 1 5 LEU 5 5 5 LEU LEU S . n S 1 6 GLU 6 6 6 GLU GLU S . n S 1 7 ALA 7 7 7 ALA ALA S . n S 1 8 ASP 8 8 8 ASP ASP S . n S 1 9 ALA 9 9 9 ALA ALA S . n S 1 10 GLU 10 10 10 GLU GLU S . n S 1 11 ILE 11 11 11 ILE ILE S . n S 1 12 LEU 12 12 12 LEU LEU S . n S 1 13 ARG 13 13 13 ARG ARG S . n S 1 14 ALA 14 14 14 ALA ALA S . n S 1 15 TYR 15 15 15 TYR TYR S . n S 1 16 ALA 16 16 16 ALA ALA S . n S 1 17 ARG 17 17 17 ARG ARG S . n S 1 18 ILE 18 18 18 ILE ILE S . n S 1 19 LEU 19 19 19 LEU LEU S . n S 1 20 GLU 20 20 20 GLU GLU S . n S 1 21 ALA 21 21 21 ALA ALA S . n S 1 22 HIS 22 22 22 HIS HIS S . n S 1 23 ALA 23 23 23 ALA ALA S . n S 1 24 GLU 24 24 24 GLU GLU S . n S 1 25 ILE 25 25 25 ILE ILE S . n S 1 26 LEU 26 26 26 LEU LEU S . n S 1 27 ARG 27 27 27 ARG ARG S . n S 1 28 ALA 28 28 28 ALA ALA S . n S 1 29 GLN 29 29 29 GLN GLN S . n # _cell.entry_id 3J89 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J89 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3J89 _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4427 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4427 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 3J89 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3J89 _struct.title 'Structural Plasticity of Helical Nanotubes Based on Coiled-Coil Assemblies' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J89 _struct_keywords.pdbx_keywords 'SYNTHETIC PEPTIDE' _struct_keywords.text 'coiled-coil, synthetic peptide, nanotube, helical filament' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 1 ? Q N N 1 ? R N N 1 ? S N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3J89 _struct_ref.pdbx_db_accession 3J89 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code QARILEADAEILRAYARILEAHAEILRAQ _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3J89 A 1 ? 29 ? 3J89 1 ? 29 ? 1 29 2 1 3J89 B 1 ? 29 ? 3J89 1 ? 29 ? 1 29 3 1 3J89 C 1 ? 29 ? 3J89 1 ? 29 ? 1 29 4 1 3J89 D 1 ? 29 ? 3J89 1 ? 29 ? 1 29 5 1 3J89 E 1 ? 29 ? 3J89 1 ? 29 ? 1 29 6 1 3J89 F 1 ? 29 ? 3J89 1 ? 29 ? 1 29 7 1 3J89 G 1 ? 29 ? 3J89 1 ? 29 ? 1 29 8 1 3J89 H 1 ? 29 ? 3J89 1 ? 29 ? 1 29 9 1 3J89 I 1 ? 29 ? 3J89 1 ? 29 ? 1 29 10 1 3J89 J 1 ? 29 ? 3J89 1 ? 29 ? 1 29 11 1 3J89 K 1 ? 29 ? 3J89 1 ? 29 ? 1 29 12 1 3J89 L 1 ? 29 ? 3J89 1 ? 29 ? 1 29 13 1 3J89 M 1 ? 29 ? 3J89 1 ? 29 ? 1 29 14 1 3J89 N 1 ? 29 ? 3J89 1 ? 29 ? 1 29 15 1 3J89 O 1 ? 29 ? 3J89 1 ? 29 ? 1 29 16 1 3J89 P 1 ? 29 ? 3J89 1 ? 29 ? 1 29 17 1 3J89 Q 1 ? 29 ? 3J89 1 ? 29 ? 1 29 18 1 3J89 R 1 ? 29 ? 3J89 1 ? 29 ? 1 29 19 1 3J89 S 1 ? 29 ? 3J89 1 ? 29 ? 1 29 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details nonadecameric _pdbx_struct_assembly.oligomeric_count 19 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;This peptide forms a helical nanotube of indeterminate length. The designation "nonadecameric" in REMARK 350 is an artifact of the PDB format and can be disregarded. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 1 ? GLN A 29 ? GLN A 1 GLN A 29 1 ? 29 HELX_P HELX_P2 2 ALA B 2 ? GLN B 29 ? ALA B 2 GLN B 29 1 ? 28 HELX_P HELX_P3 3 ALA C 2 ? GLN C 29 ? ALA C 2 GLN C 29 1 ? 28 HELX_P HELX_P4 4 ALA D 2 ? GLN D 29 ? ALA D 2 GLN D 29 1 ? 28 HELX_P HELX_P5 5 ALA E 2 ? GLN E 29 ? ALA E 2 GLN E 29 1 ? 28 HELX_P HELX_P6 6 ALA F 2 ? GLN F 29 ? ALA F 2 GLN F 29 1 ? 28 HELX_P HELX_P7 7 ALA G 2 ? GLN G 29 ? ALA G 2 GLN G 29 1 ? 28 HELX_P HELX_P8 8 ALA H 2 ? GLN H 29 ? ALA H 2 GLN H 29 1 ? 28 HELX_P HELX_P9 9 ALA I 2 ? GLN I 29 ? ALA I 2 GLN I 29 1 ? 28 HELX_P HELX_P10 10 ALA J 2 ? GLN J 29 ? ALA J 2 GLN J 29 1 ? 28 HELX_P HELX_P11 11 ALA K 2 ? GLN K 29 ? ALA K 2 GLN K 29 1 ? 28 HELX_P HELX_P12 12 ALA L 2 ? GLN L 29 ? ALA L 2 GLN L 29 1 ? 28 HELX_P HELX_P13 13 ALA M 2 ? GLN M 29 ? ALA M 2 GLN M 29 1 ? 28 HELX_P HELX_P14 14 ALA N 2 ? GLN N 29 ? ALA N 2 GLN N 29 1 ? 28 HELX_P HELX_P15 15 ALA O 2 ? GLN O 29 ? ALA O 2 GLN O 29 1 ? 28 HELX_P HELX_P16 16 ALA P 2 ? GLN P 29 ? ALA P 2 GLN P 29 1 ? 28 HELX_P HELX_P17 17 ALA Q 2 ? GLN Q 29 ? ALA Q 2 GLN Q 29 1 ? 28 HELX_P HELX_P18 18 ALA R 2 ? GLN R 29 ? ALA R 2 GLN R 29 1 ? 28 HELX_P HELX_P19 19 ALA S 2 ? GLN S 29 ? ALA S 2 GLN S 29 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 13 ? ? CZ A ARG 13 ? ? NH2 A ARG 13 ? ? 116.49 120.30 -3.81 0.50 N 2 1 NE A ARG 17 ? ? CZ A ARG 17 ? ? NH1 A ARG 17 ? ? 123.36 120.30 3.06 0.50 N 3 1 NE A ARG 17 ? ? CZ A ARG 17 ? ? NH2 A ARG 17 ? ? 116.36 120.30 -3.94 0.50 N 4 1 NE B ARG 13 ? ? CZ B ARG 13 ? ? NH2 B ARG 13 ? ? 116.48 120.30 -3.82 0.50 N 5 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH1 B ARG 17 ? ? 123.36 120.30 3.06 0.50 N 6 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH2 B ARG 17 ? ? 116.31 120.30 -3.99 0.50 N 7 1 NE C ARG 13 ? ? CZ C ARG 13 ? ? NH2 C ARG 13 ? ? 116.50 120.30 -3.80 0.50 N 8 1 NE C ARG 17 ? ? CZ C ARG 17 ? ? NH2 C ARG 17 ? ? 116.41 120.30 -3.89 0.50 N 9 1 NE D ARG 13 ? ? CZ D ARG 13 ? ? NH2 D ARG 13 ? ? 116.49 120.30 -3.81 0.50 N 10 1 NE D ARG 17 ? ? CZ D ARG 17 ? ? NH1 D ARG 17 ? ? 123.31 120.30 3.01 0.50 N 11 1 NE D ARG 17 ? ? CZ D ARG 17 ? ? NH2 D ARG 17 ? ? 116.37 120.30 -3.93 0.50 N 12 1 NE E ARG 13 ? ? CZ E ARG 13 ? ? NH2 E ARG 13 ? ? 116.48 120.30 -3.82 0.50 N 13 1 NE E ARG 17 ? ? CZ E ARG 17 ? ? NH1 E ARG 17 ? ? 123.33 120.30 3.03 0.50 N 14 1 NE E ARG 17 ? ? CZ E ARG 17 ? ? NH2 E ARG 17 ? ? 116.40 120.30 -3.90 0.50 N 15 1 NE F ARG 13 ? ? CZ F ARG 13 ? ? NH2 F ARG 13 ? ? 116.50 120.30 -3.80 0.50 N 16 1 NE F ARG 17 ? ? CZ F ARG 17 ? ? NH2 F ARG 17 ? ? 116.51 120.30 -3.79 0.50 N 17 1 NE G ARG 13 ? ? CZ G ARG 13 ? ? NH2 G ARG 13 ? ? 116.55 120.30 -3.75 0.50 N 18 1 NE G ARG 17 ? ? CZ G ARG 17 ? ? NH2 G ARG 17 ? ? 116.47 120.30 -3.83 0.50 N 19 1 NE H ARG 13 ? ? CZ H ARG 13 ? ? NH2 H ARG 13 ? ? 116.53 120.30 -3.77 0.50 N 20 1 NE H ARG 17 ? ? CZ H ARG 17 ? ? NH2 H ARG 17 ? ? 116.39 120.30 -3.91 0.50 N 21 1 NE I ARG 13 ? ? CZ I ARG 13 ? ? NH2 I ARG 13 ? ? 116.40 120.30 -3.90 0.50 N 22 1 NE I ARG 17 ? ? CZ I ARG 17 ? ? NH1 I ARG 17 ? ? 123.38 120.30 3.08 0.50 N 23 1 NE I ARG 17 ? ? CZ I ARG 17 ? ? NH2 I ARG 17 ? ? 116.39 120.30 -3.91 0.50 N 24 1 NE J ARG 13 ? ? CZ J ARG 13 ? ? NH2 J ARG 13 ? ? 116.51 120.30 -3.79 0.50 N 25 1 NE J ARG 17 ? ? CZ J ARG 17 ? ? NH1 J ARG 17 ? ? 123.32 120.30 3.02 0.50 N 26 1 NE J ARG 17 ? ? CZ J ARG 17 ? ? NH2 J ARG 17 ? ? 116.43 120.30 -3.87 0.50 N 27 1 NE K ARG 13 ? ? CZ K ARG 13 ? ? NH2 K ARG 13 ? ? 116.52 120.30 -3.78 0.50 N 28 1 NE K ARG 17 ? ? CZ K ARG 17 ? ? NH2 K ARG 17 ? ? 116.49 120.30 -3.81 0.50 N 29 1 NE L ARG 13 ? ? CZ L ARG 13 ? ? NH2 L ARG 13 ? ? 116.54 120.30 -3.76 0.50 N 30 1 NE L ARG 17 ? ? CZ L ARG 17 ? ? NH1 L ARG 17 ? ? 123.35 120.30 3.05 0.50 N 31 1 NE L ARG 17 ? ? CZ L ARG 17 ? ? NH2 L ARG 17 ? ? 116.44 120.30 -3.86 0.50 N 32 1 NE M ARG 13 ? ? CZ M ARG 13 ? ? NH2 M ARG 13 ? ? 116.53 120.30 -3.77 0.50 N 33 1 NE M ARG 17 ? ? CZ M ARG 17 ? ? NH1 M ARG 17 ? ? 123.36 120.30 3.06 0.50 N 34 1 NE M ARG 17 ? ? CZ M ARG 17 ? ? NH2 M ARG 17 ? ? 116.39 120.30 -3.91 0.50 N 35 1 NE N ARG 13 ? ? CZ N ARG 13 ? ? NH2 N ARG 13 ? ? 116.60 120.30 -3.70 0.50 N 36 1 NE N ARG 17 ? ? CZ N ARG 17 ? ? NH1 N ARG 17 ? ? 123.31 120.30 3.01 0.50 N 37 1 NE N ARG 17 ? ? CZ N ARG 17 ? ? NH2 N ARG 17 ? ? 116.48 120.30 -3.82 0.50 N 38 1 NE O ARG 13 ? ? CZ O ARG 13 ? ? NH2 O ARG 13 ? ? 116.49 120.30 -3.81 0.50 N 39 1 NE O ARG 17 ? ? CZ O ARG 17 ? ? NH1 O ARG 17 ? ? 123.35 120.30 3.05 0.50 N 40 1 NE O ARG 17 ? ? CZ O ARG 17 ? ? NH2 O ARG 17 ? ? 116.45 120.30 -3.85 0.50 N 41 1 NE P ARG 13 ? ? CZ P ARG 13 ? ? NH2 P ARG 13 ? ? 116.51 120.30 -3.79 0.50 N 42 1 NE P ARG 17 ? ? CZ P ARG 17 ? ? NH1 P ARG 17 ? ? 123.31 120.30 3.01 0.50 N 43 1 NE P ARG 17 ? ? CZ P ARG 17 ? ? NH2 P ARG 17 ? ? 116.43 120.30 -3.87 0.50 N 44 1 NE Q ARG 13 ? ? CZ Q ARG 13 ? ? NH2 Q ARG 13 ? ? 116.49 120.30 -3.81 0.50 N 45 1 NE Q ARG 17 ? ? CZ Q ARG 17 ? ? NH1 Q ARG 17 ? ? 123.32 120.30 3.02 0.50 N 46 1 NE Q ARG 17 ? ? CZ Q ARG 17 ? ? NH2 Q ARG 17 ? ? 116.41 120.30 -3.89 0.50 N 47 1 NE R ARG 13 ? ? CZ R ARG 13 ? ? NH2 R ARG 13 ? ? 116.50 120.30 -3.80 0.50 N 48 1 NE R ARG 17 ? ? CZ R ARG 17 ? ? NH1 R ARG 17 ? ? 123.42 120.30 3.12 0.50 N 49 1 NE R ARG 17 ? ? CZ R ARG 17 ? ? NH2 R ARG 17 ? ? 116.32 120.30 -3.98 0.50 N 50 1 NE S ARG 13 ? ? CZ S ARG 13 ? ? NH2 S ARG 13 ? ? 116.56 120.30 -3.74 0.50 N 51 1 NE S ARG 17 ? ? CZ S ARG 17 ? ? NH2 S ARG 17 ? ? 116.47 120.30 -3.83 0.50 N # _pdbx_helical_symmetry.entry_id 3J89 _pdbx_helical_symmetry.number_of_operations 19 _pdbx_helical_symmetry.rotation_per_n_subunits -87.1 _pdbx_helical_symmetry.rise_per_n_subunits 2.2 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # _em_3d_reconstruction.entry_id 3J89 _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method OTHER _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method IHRSR _em_3d_reconstruction.nominal_pixel_size 1.02 _em_3d_reconstruction.actual_pixel_size 1.02 _em_3d_reconstruction.resolution 3.6 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details 'Both FSC and comparison with atomic model used for resolution determination.' _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.algorithm ? # _em_entity_assembly.id 1 _em_entity_assembly.name 'Helical nanotube formed from a 29-residue peptide' _em_entity_assembly.type COMPLEX _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 3J89 _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 260 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J89 _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date 2013-08-01 _em_imaging.temperature ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.nominal_defocus_min 1400 _em_imaging.nominal_defocus_max 4400 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.7 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details ? _em_imaging.specimen_holder_type 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_vitrification.entry_id 3J89 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.details 'Plunged into liquid ethane (FEI VITROBOT MARK IV)' _em_vitrification.citation_id ? _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 90 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 3J89 _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method HELICAL # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 HIS N N N N 96 HIS CA C N S 97 HIS C C N N 98 HIS O O N N 99 HIS CB C N N 100 HIS CG C Y N 101 HIS ND1 N Y N 102 HIS CD2 C Y N 103 HIS CE1 C Y N 104 HIS NE2 N Y N 105 HIS OXT O N N 106 HIS H H N N 107 HIS H2 H N N 108 HIS HA H N N 109 HIS HB2 H N N 110 HIS HB3 H N N 111 HIS HD1 H N N 112 HIS HD2 H N N 113 HIS HE1 H N N 114 HIS HE2 H N N 115 HIS HXT H N N 116 ILE N N N N 117 ILE CA C N S 118 ILE C C N N 119 ILE O O N N 120 ILE CB C N S 121 ILE CG1 C N N 122 ILE CG2 C N N 123 ILE CD1 C N N 124 ILE OXT O N N 125 ILE H H N N 126 ILE H2 H N N 127 ILE HA H N N 128 ILE HB H N N 129 ILE HG12 H N N 130 ILE HG13 H N N 131 ILE HG21 H N N 132 ILE HG22 H N N 133 ILE HG23 H N N 134 ILE HD11 H N N 135 ILE HD12 H N N 136 ILE HD13 H N N 137 ILE HXT H N N 138 LEU N N N N 139 LEU CA C N S 140 LEU C C N N 141 LEU O O N N 142 LEU CB C N N 143 LEU CG C N N 144 LEU CD1 C N N 145 LEU CD2 C N N 146 LEU OXT O N N 147 LEU H H N N 148 LEU H2 H N N 149 LEU HA H N N 150 LEU HB2 H N N 151 LEU HB3 H N N 152 LEU HG H N N 153 LEU HD11 H N N 154 LEU HD12 H N N 155 LEU HD13 H N N 156 LEU HD21 H N N 157 LEU HD22 H N N 158 LEU HD23 H N N 159 LEU HXT H N N 160 TYR N N N N 161 TYR CA C N S 162 TYR C C N N 163 TYR O O N N 164 TYR CB C N N 165 TYR CG C Y N 166 TYR CD1 C Y N 167 TYR CD2 C Y N 168 TYR CE1 C Y N 169 TYR CE2 C Y N 170 TYR CZ C Y N 171 TYR OH O N N 172 TYR OXT O N N 173 TYR H H N N 174 TYR H2 H N N 175 TYR HA H N N 176 TYR HB2 H N N 177 TYR HB3 H N N 178 TYR HD1 H N N 179 TYR HD2 H N N 180 TYR HE1 H N N 181 TYR HE2 H N N 182 TYR HH H N N 183 TYR HXT H N N 184 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 HIS N CA sing N N 91 HIS N H sing N N 92 HIS N H2 sing N N 93 HIS CA C sing N N 94 HIS CA CB sing N N 95 HIS CA HA sing N N 96 HIS C O doub N N 97 HIS C OXT sing N N 98 HIS CB CG sing N N 99 HIS CB HB2 sing N N 100 HIS CB HB3 sing N N 101 HIS CG ND1 sing Y N 102 HIS CG CD2 doub Y N 103 HIS ND1 CE1 doub Y N 104 HIS ND1 HD1 sing N N 105 HIS CD2 NE2 sing Y N 106 HIS CD2 HD2 sing N N 107 HIS CE1 NE2 sing Y N 108 HIS CE1 HE1 sing N N 109 HIS NE2 HE2 sing N N 110 HIS OXT HXT sing N N 111 ILE N CA sing N N 112 ILE N H sing N N 113 ILE N H2 sing N N 114 ILE CA C sing N N 115 ILE CA CB sing N N 116 ILE CA HA sing N N 117 ILE C O doub N N 118 ILE C OXT sing N N 119 ILE CB CG1 sing N N 120 ILE CB CG2 sing N N 121 ILE CB HB sing N N 122 ILE CG1 CD1 sing N N 123 ILE CG1 HG12 sing N N 124 ILE CG1 HG13 sing N N 125 ILE CG2 HG21 sing N N 126 ILE CG2 HG22 sing N N 127 ILE CG2 HG23 sing N N 128 ILE CD1 HD11 sing N N 129 ILE CD1 HD12 sing N N 130 ILE CD1 HD13 sing N N 131 ILE OXT HXT sing N N 132 LEU N CA sing N N 133 LEU N H sing N N 134 LEU N H2 sing N N 135 LEU CA C sing N N 136 LEU CA CB sing N N 137 LEU CA HA sing N N 138 LEU C O doub N N 139 LEU C OXT sing N N 140 LEU CB CG sing N N 141 LEU CB HB2 sing N N 142 LEU CB HB3 sing N N 143 LEU CG CD1 sing N N 144 LEU CG CD2 sing N N 145 LEU CG HG sing N N 146 LEU CD1 HD11 sing N N 147 LEU CD1 HD12 sing N N 148 LEU CD1 HD13 sing N N 149 LEU CD2 HD21 sing N N 150 LEU CD2 HD22 sing N N 151 LEU CD2 HD23 sing N N 152 LEU OXT HXT sing N N 153 TYR N CA sing N N 154 TYR N H sing N N 155 TYR N H2 sing N N 156 TYR CA C sing N N 157 TYR CA CB sing N N 158 TYR CA HA sing N N 159 TYR C O doub N N 160 TYR C OXT sing N N 161 TYR CB CG sing N N 162 TYR CB HB2 sing N N 163 TYR CB HB3 sing N N 164 TYR CG CD1 doub Y N 165 TYR CG CD2 sing Y N 166 TYR CD1 CE1 sing Y N 167 TYR CD1 HD1 sing N N 168 TYR CD2 CE2 doub Y N 169 TYR CD2 HD2 sing N N 170 TYR CE1 CZ doub Y N 171 TYR CE1 HE1 sing N N 172 TYR CE2 CZ sing Y N 173 TYR CE2 HE2 sing N N 174 TYR CZ OH sing N N 175 TYR OH HH sing N N 176 TYR OXT HXT sing N N 177 # _em_ctf_correction.id 1 _em_ctf_correction.details 'micrographs multiplied by CTF' _em_ctf_correction.type . # _em_helical_entity.id 1 _em_helical_entity.angular_rotation_per_subunit 87.1 _em_helical_entity.axial_rise_per_subunit 2.2 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? _em_helical_entity.image_processing_id 1 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 10 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'FEI FALCON II (4k x 4k)' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_software.id 1 _em_software.name SPIDER _em_software.version ? _em_software.category RECONSTRUCTION _em_software.details ? _em_software.image_processing_id 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _atom_sites.entry_id 3J89 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_