data_3J9E # _entry.id 3J9E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB RCSB160416 ? ? PDB 3J9E pdb_00003j9e 10.2210/pdb3j9e/pdb WWPDB D_1000160416 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-09 2 'Structure model' 1 1 2015-12-23 3 'Structure model' 1 2 2016-01-20 4 'Structure model' 1 3 2018-07-18 5 'Structure model' 1 4 2019-12-18 6 'Structure model' 1 5 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' Other 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' em_software 2 5 'Structure model' atom_sites 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' refine # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_em_software.image_processing_id' 2 4 'Structure model' '_em_software.name' 3 5 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 4 5 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 5 5 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 6 6 'Structure model' '_database_2.pdbx_DOI' 7 6 'Structure model' '_database_2.pdbx_database_accession' 8 6 'Structure model' '_refine.ls_d_res_high' 9 6 'Structure model' '_refine.ls_d_res_low' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'RESIDUES D LYS 13 AND D LYS 14 ARE NOT PROPERLY LINKED.' 2 'RESIDUES D GLU 67 AND D SER 68 ARE NOT PROPERLY LINKED.' 3 'RESIDUES D ASP 144 AND D GLU 145 ARE NOT PROPERLY LINKED.' 4 'RESIDUES D GLY 442 AND D THR 443 ARE NOT PROPERLY LINKED.' 5 'RESIDUES D LYS 454 AND D THR 455 ARE NOT PROPERLY LINKED.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3J9E _pdbx_database_status.recvd_initial_deposition_date 2015-01-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details EMDB EMD-6240 'associated EM volume' . EMDB EMD-6239 'other EM volume' . PDB 3J9D unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, X.' 1 'Patel, A.' 2 'Celma, C.' 3 'Roy, P.' 4 'Zhou, Z.H.' 5 # _citation.id primary _citation.title 'Atomic model of a nonenveloped virus reveals pH sensors for a coordinated process of cell entry.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 23 _citation.page_first 74 _citation.page_last 80 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26641711 _citation.pdbx_database_id_DOI 10.1038/nsmb.3134 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, X.' 1 ? primary 'Patel, A.' 2 ? primary 'Celma, C.C.' 3 ? primary 'Yu, X.' 4 ? primary 'Roy, P.' 5 ? primary 'Zhou, Z.H.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description VP5 _entity.formula_weight 59070.371 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGKVIRSLNRFGKKVGNALTSNTAKKIYSTIGKAAERFAESEIGSAAIDGLVQGSVHSIITGESYGESVKQAVLLNVLGS GEEIPDPLSPGERGIQAKLKELEDEQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNK ILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMTADVLEAASEEVPLIGA GMATAVATGRAIEGAYKLKKVINALSGIDLTHLRTPKIEPSVVSTILEYRAKEIPDNALAVSVLSKNRAIQENHKELMHI KNEILPRFKKAMDEEKEICGIEDKVIHPKVMMKFKIPRAQQPQIHVYSAPWDSDDVFFFHCISHHHANESFFLGFDLSID LVHYEDLTAHWHALGAAQTAAGRTLTEAYREFLNLAISNAFGTQMHTRRLVRSKTVHPIYLGSLHYDISFSDLRGNAQRI VYDDELQMHILRGPIHFQRRAILGALKFGCKVLGDRLDVPLFLRNA ; _entity_poly.pdbx_seq_one_letter_code_can ;MGKVIRSLNRFGKKVGNALTSNTAKKIYSTIGKAAERFAESEIGSAAIDGLVQGSVHSIITGESYGESVKQAVLLNVLGS GEEIPDPLSPGERGIQAKLKELEDEQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNK ILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMTADVLEAASEEVPLIGA GMATAVATGRAIEGAYKLKKVINALSGIDLTHLRTPKIEPSVVSTILEYRAKEIPDNALAVSVLSKNRAIQENHKELMHI KNEILPRFKKAMDEEKEICGIEDKVIHPKVMMKFKIPRAQQPQIHVYSAPWDSDDVFFFHCISHHHANESFFLGFDLSID LVHYEDLTAHWHALGAAQTAAGRTLTEAYREFLNLAISNAFGTQMHTRRLVRSKTVHPIYLGSLHYDISFSDLRGNAQRI VYDDELQMHILRGPIHFQRRAILGALKFGCKVLGDRLDVPLFLRNA ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LYS n 1 4 VAL n 1 5 ILE n 1 6 ARG n 1 7 SER n 1 8 LEU n 1 9 ASN n 1 10 ARG n 1 11 PHE n 1 12 GLY n 1 13 LYS n 1 14 LYS n 1 15 VAL n 1 16 GLY n 1 17 ASN n 1 18 ALA n 1 19 LEU n 1 20 THR n 1 21 SER n 1 22 ASN n 1 23 THR n 1 24 ALA n 1 25 LYS n 1 26 LYS n 1 27 ILE n 1 28 TYR n 1 29 SER n 1 30 THR n 1 31 ILE n 1 32 GLY n 1 33 LYS n 1 34 ALA n 1 35 ALA n 1 36 GLU n 1 37 ARG n 1 38 PHE n 1 39 ALA n 1 40 GLU n 1 41 SER n 1 42 GLU n 1 43 ILE n 1 44 GLY n 1 45 SER n 1 46 ALA n 1 47 ALA n 1 48 ILE n 1 49 ASP n 1 50 GLY n 1 51 LEU n 1 52 VAL n 1 53 GLN n 1 54 GLY n 1 55 SER n 1 56 VAL n 1 57 HIS n 1 58 SER n 1 59 ILE n 1 60 ILE n 1 61 THR n 1 62 GLY n 1 63 GLU n 1 64 SER n 1 65 TYR n 1 66 GLY n 1 67 GLU n 1 68 SER n 1 69 VAL n 1 70 LYS n 1 71 GLN n 1 72 ALA n 1 73 VAL n 1 74 LEU n 1 75 LEU n 1 76 ASN n 1 77 VAL n 1 78 LEU n 1 79 GLY n 1 80 SER n 1 81 GLY n 1 82 GLU n 1 83 GLU n 1 84 ILE n 1 85 PRO n 1 86 ASP n 1 87 PRO n 1 88 LEU n 1 89 SER n 1 90 PRO n 1 91 GLY n 1 92 GLU n 1 93 ARG n 1 94 GLY n 1 95 ILE n 1 96 GLN n 1 97 ALA n 1 98 LYS n 1 99 LEU n 1 100 LYS n 1 101 GLU n 1 102 LEU n 1 103 GLU n 1 104 ASP n 1 105 GLU n 1 106 GLN n 1 107 ARG n 1 108 ASN n 1 109 GLU n 1 110 LEU n 1 111 VAL n 1 112 ARG n 1 113 LEU n 1 114 LYS n 1 115 TYR n 1 116 ASN n 1 117 ASP n 1 118 LYS n 1 119 ILE n 1 120 LYS n 1 121 GLU n 1 122 LYS n 1 123 PHE n 1 124 GLY n 1 125 LYS n 1 126 GLU n 1 127 LEU n 1 128 GLU n 1 129 GLU n 1 130 VAL n 1 131 TYR n 1 132 ASN n 1 133 PHE n 1 134 MET n 1 135 ASN n 1 136 GLY n 1 137 GLU n 1 138 ALA n 1 139 ASN n 1 140 ALA n 1 141 GLU n 1 142 ILE n 1 143 GLU n 1 144 ASP n 1 145 GLU n 1 146 LYS n 1 147 GLN n 1 148 PHE n 1 149 ASP n 1 150 ILE n 1 151 LEU n 1 152 ASN n 1 153 LYS n 1 154 ALA n 1 155 VAL n 1 156 THR n 1 157 SER n 1 158 TYR n 1 159 ASN n 1 160 LYS n 1 161 ILE n 1 162 LEU n 1 163 THR n 1 164 GLU n 1 165 GLU n 1 166 ASP n 1 167 LEU n 1 168 GLN n 1 169 MET n 1 170 ARG n 1 171 ARG n 1 172 LEU n 1 173 ALA n 1 174 THR n 1 175 ALA n 1 176 LEU n 1 177 GLN n 1 178 LYS n 1 179 GLU n 1 180 ILE n 1 181 GLY n 1 182 GLU n 1 183 ARG n 1 184 THR n 1 185 HIS n 1 186 ALA n 1 187 GLU n 1 188 THR n 1 189 VAL n 1 190 MET n 1 191 VAL n 1 192 LYS n 1 193 GLU n 1 194 TYR n 1 195 ARG n 1 196 ASP n 1 197 LYS n 1 198 ILE n 1 199 ASP n 1 200 ALA n 1 201 LEU n 1 202 LYS n 1 203 ASN n 1 204 ALA n 1 205 ILE n 1 206 GLU n 1 207 VAL n 1 208 GLU n 1 209 ARG n 1 210 ASP n 1 211 GLY n 1 212 MET n 1 213 GLN n 1 214 GLU n 1 215 GLU n 1 216 ALA n 1 217 ILE n 1 218 GLN n 1 219 GLU n 1 220 ILE n 1 221 ALA n 1 222 GLY n 1 223 MET n 1 224 THR n 1 225 ALA n 1 226 ASP n 1 227 VAL n 1 228 LEU n 1 229 GLU n 1 230 ALA n 1 231 ALA n 1 232 SER n 1 233 GLU n 1 234 GLU n 1 235 VAL n 1 236 PRO n 1 237 LEU n 1 238 ILE n 1 239 GLY n 1 240 ALA n 1 241 GLY n 1 242 MET n 1 243 ALA n 1 244 THR n 1 245 ALA n 1 246 VAL n 1 247 ALA n 1 248 THR n 1 249 GLY n 1 250 ARG n 1 251 ALA n 1 252 ILE n 1 253 GLU n 1 254 GLY n 1 255 ALA n 1 256 TYR n 1 257 LYS n 1 258 LEU n 1 259 LYS n 1 260 LYS n 1 261 VAL n 1 262 ILE n 1 263 ASN n 1 264 ALA n 1 265 LEU n 1 266 SER n 1 267 GLY n 1 268 ILE n 1 269 ASP n 1 270 LEU n 1 271 THR n 1 272 HIS n 1 273 LEU n 1 274 ARG n 1 275 THR n 1 276 PRO n 1 277 LYS n 1 278 ILE n 1 279 GLU n 1 280 PRO n 1 281 SER n 1 282 VAL n 1 283 VAL n 1 284 SER n 1 285 THR n 1 286 ILE n 1 287 LEU n 1 288 GLU n 1 289 TYR n 1 290 ARG n 1 291 ALA n 1 292 LYS n 1 293 GLU n 1 294 ILE n 1 295 PRO n 1 296 ASP n 1 297 ASN n 1 298 ALA n 1 299 LEU n 1 300 ALA n 1 301 VAL n 1 302 SER n 1 303 VAL n 1 304 LEU n 1 305 SER n 1 306 LYS n 1 307 ASN n 1 308 ARG n 1 309 ALA n 1 310 ILE n 1 311 GLN n 1 312 GLU n 1 313 ASN n 1 314 HIS n 1 315 LYS n 1 316 GLU n 1 317 LEU n 1 318 MET n 1 319 HIS n 1 320 ILE n 1 321 LYS n 1 322 ASN n 1 323 GLU n 1 324 ILE n 1 325 LEU n 1 326 PRO n 1 327 ARG n 1 328 PHE n 1 329 LYS n 1 330 LYS n 1 331 ALA n 1 332 MET n 1 333 ASP n 1 334 GLU n 1 335 GLU n 1 336 LYS n 1 337 GLU n 1 338 ILE n 1 339 CYS n 1 340 GLY n 1 341 ILE n 1 342 GLU n 1 343 ASP n 1 344 LYS n 1 345 VAL n 1 346 ILE n 1 347 HIS n 1 348 PRO n 1 349 LYS n 1 350 VAL n 1 351 MET n 1 352 MET n 1 353 LYS n 1 354 PHE n 1 355 LYS n 1 356 ILE n 1 357 PRO n 1 358 ARG n 1 359 ALA n 1 360 GLN n 1 361 GLN n 1 362 PRO n 1 363 GLN n 1 364 ILE n 1 365 HIS n 1 366 VAL n 1 367 TYR n 1 368 SER n 1 369 ALA n 1 370 PRO n 1 371 TRP n 1 372 ASP n 1 373 SER n 1 374 ASP n 1 375 ASP n 1 376 VAL n 1 377 PHE n 1 378 PHE n 1 379 PHE n 1 380 HIS n 1 381 CYS n 1 382 ILE n 1 383 SER n 1 384 HIS n 1 385 HIS n 1 386 HIS n 1 387 ALA n 1 388 ASN n 1 389 GLU n 1 390 SER n 1 391 PHE n 1 392 PHE n 1 393 LEU n 1 394 GLY n 1 395 PHE n 1 396 ASP n 1 397 LEU n 1 398 SER n 1 399 ILE n 1 400 ASP n 1 401 LEU n 1 402 VAL n 1 403 HIS n 1 404 TYR n 1 405 GLU n 1 406 ASP n 1 407 LEU n 1 408 THR n 1 409 ALA n 1 410 HIS n 1 411 TRP n 1 412 HIS n 1 413 ALA n 1 414 LEU n 1 415 GLY n 1 416 ALA n 1 417 ALA n 1 418 GLN n 1 419 THR n 1 420 ALA n 1 421 ALA n 1 422 GLY n 1 423 ARG n 1 424 THR n 1 425 LEU n 1 426 THR n 1 427 GLU n 1 428 ALA n 1 429 TYR n 1 430 ARG n 1 431 GLU n 1 432 PHE n 1 433 LEU n 1 434 ASN n 1 435 LEU n 1 436 ALA n 1 437 ILE n 1 438 SER n 1 439 ASN n 1 440 ALA n 1 441 PHE n 1 442 GLY n 1 443 THR n 1 444 GLN n 1 445 MET n 1 446 HIS n 1 447 THR n 1 448 ARG n 1 449 ARG n 1 450 LEU n 1 451 VAL n 1 452 ARG n 1 453 SER n 1 454 LYS n 1 455 THR n 1 456 VAL n 1 457 HIS n 1 458 PRO n 1 459 ILE n 1 460 TYR n 1 461 LEU n 1 462 GLY n 1 463 SER n 1 464 LEU n 1 465 HIS n 1 466 TYR n 1 467 ASP n 1 468 ILE n 1 469 SER n 1 470 PHE n 1 471 SER n 1 472 ASP n 1 473 LEU n 1 474 ARG n 1 475 GLY n 1 476 ASN n 1 477 ALA n 1 478 GLN n 1 479 ARG n 1 480 ILE n 1 481 VAL n 1 482 TYR n 1 483 ASP n 1 484 ASP n 1 485 GLU n 1 486 LEU n 1 487 GLN n 1 488 MET n 1 489 HIS n 1 490 ILE n 1 491 LEU n 1 492 ARG n 1 493 GLY n 1 494 PRO n 1 495 ILE n 1 496 HIS n 1 497 PHE n 1 498 GLN n 1 499 ARG n 1 500 ARG n 1 501 ALA n 1 502 ILE n 1 503 LEU n 1 504 GLY n 1 505 ALA n 1 506 LEU n 1 507 LYS n 1 508 PHE n 1 509 GLY n 1 510 CYS n 1 511 LYS n 1 512 VAL n 1 513 LEU n 1 514 GLY n 1 515 ASP n 1 516 ARG n 1 517 LEU n 1 518 ASP n 1 519 VAL n 1 520 PRO n 1 521 LEU n 1 522 PHE n 1 523 LEU n 1 524 ARG n 1 525 ASN n 1 526 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Bluetongue virus 1' _entity_src_nat.pdbx_ncbi_taxonomy_id 35327 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? D . n A 1 2 GLY 2 2 2 GLY GLY D . n A 1 3 LYS 3 3 3 LYS LYS D . n A 1 4 VAL 4 4 4 VAL VAL D . n A 1 5 ILE 5 5 5 ILE ILE D . n A 1 6 ARG 6 6 6 ARG ARG D . n A 1 7 SER 7 7 7 SER SER D . n A 1 8 LEU 8 8 8 LEU LEU D . n A 1 9 ASN 9 9 9 ASN ASN D . n A 1 10 ARG 10 10 10 ARG ARG D . n A 1 11 PHE 11 11 11 PHE PHE D . n A 1 12 GLY 12 12 12 GLY GLY D . n A 1 13 LYS 13 13 13 LYS LYS D . n A 1 14 LYS 14 14 14 LYS LYS D . n A 1 15 VAL 15 15 15 VAL VAL D . n A 1 16 GLY 16 16 16 GLY GLY D . n A 1 17 ASN 17 17 17 ASN ASN D . n A 1 18 ALA 18 18 18 ALA ALA D . n A 1 19 LEU 19 19 19 LEU LEU D . n A 1 20 THR 20 20 20 THR THR D . n A 1 21 SER 21 21 21 SER SER D . n A 1 22 ASN 22 22 22 ASN ASN D . n A 1 23 THR 23 23 23 THR THR D . n A 1 24 ALA 24 24 24 ALA ALA D . n A 1 25 LYS 25 25 25 LYS LYS D . n A 1 26 LYS 26 26 26 LYS LYS D . n A 1 27 ILE 27 27 27 ILE ILE D . n A 1 28 TYR 28 28 28 TYR TYR D . n A 1 29 SER 29 29 29 SER SER D . n A 1 30 THR 30 30 30 THR THR D . n A 1 31 ILE 31 31 31 ILE ILE D . n A 1 32 GLY 32 32 32 GLY GLY D . n A 1 33 LYS 33 33 33 LYS LYS D . n A 1 34 ALA 34 34 34 ALA ALA D . n A 1 35 ALA 35 35 35 ALA ALA D . n A 1 36 GLU 36 36 36 GLU GLU D . n A 1 37 ARG 37 37 37 ARG ARG D . n A 1 38 PHE 38 38 38 PHE PHE D . n A 1 39 ALA 39 39 39 ALA ALA D . n A 1 40 GLU 40 40 40 GLU GLU D . n A 1 41 SER 41 41 41 SER SER D . n A 1 42 GLU 42 42 42 GLU GLU D . n A 1 43 ILE 43 43 43 ILE ILE D . n A 1 44 GLY 44 44 44 GLY GLY D . n A 1 45 SER 45 45 45 SER SER D . n A 1 46 ALA 46 46 46 ALA ALA D . n A 1 47 ALA 47 47 47 ALA ALA D . n A 1 48 ILE 48 48 48 ILE ILE D . n A 1 49 ASP 49 49 49 ASP ASP D . n A 1 50 GLY 50 50 50 GLY GLY D . n A 1 51 LEU 51 51 51 LEU LEU D . n A 1 52 VAL 52 52 52 VAL VAL D . n A 1 53 GLN 53 53 53 GLN GLN D . n A 1 54 GLY 54 54 54 GLY GLY D . n A 1 55 SER 55 55 55 SER SER D . n A 1 56 VAL 56 56 56 VAL VAL D . n A 1 57 HIS 57 57 57 HIS HIS D . n A 1 58 SER 58 58 58 SER SER D . n A 1 59 ILE 59 59 59 ILE ILE D . n A 1 60 ILE 60 60 60 ILE ILE D . n A 1 61 THR 61 61 61 THR THR D . n A 1 62 GLY 62 62 62 GLY GLY D . n A 1 63 GLU 63 63 63 GLU GLU D . n A 1 64 SER 64 64 64 SER SER D . n A 1 65 TYR 65 65 65 TYR TYR D . n A 1 66 GLY 66 66 66 GLY GLY D . n A 1 67 GLU 67 67 67 GLU GLU D . n A 1 68 SER 68 68 68 SER SER D . n A 1 69 VAL 69 69 69 VAL VAL D . n A 1 70 LYS 70 70 70 LYS LYS D . n A 1 71 GLN 71 71 71 GLN GLN D . n A 1 72 ALA 72 72 72 ALA ALA D . n A 1 73 VAL 73 73 73 VAL VAL D . n A 1 74 LEU 74 74 74 LEU LEU D . n A 1 75 LEU 75 75 75 LEU LEU D . n A 1 76 ASN 76 76 76 ASN ASN D . n A 1 77 VAL 77 77 77 VAL VAL D . n A 1 78 LEU 78 78 78 LEU LEU D . n A 1 79 GLY 79 79 79 GLY GLY D . n A 1 80 SER 80 80 80 SER SER D . n A 1 81 GLY 81 81 81 GLY GLY D . n A 1 82 GLU 82 82 82 GLU GLU D . n A 1 83 GLU 83 83 83 GLU GLU D . n A 1 84 ILE 84 84 84 ILE ILE D . n A 1 85 PRO 85 85 85 PRO PRO D . n A 1 86 ASP 86 86 86 ASP ASP D . n A 1 87 PRO 87 87 87 PRO PRO D . n A 1 88 LEU 88 88 88 LEU LEU D . n A 1 89 SER 89 89 89 SER SER D . n A 1 90 PRO 90 90 90 PRO PRO D . n A 1 91 GLY 91 91 91 GLY GLY D . n A 1 92 GLU 92 92 92 GLU GLU D . n A 1 93 ARG 93 93 93 ARG ARG D . n A 1 94 GLY 94 94 94 GLY GLY D . n A 1 95 ILE 95 95 95 ILE ILE D . n A 1 96 GLN 96 96 96 GLN GLN D . n A 1 97 ALA 97 97 97 ALA ALA D . n A 1 98 LYS 98 98 98 LYS LYS D . n A 1 99 LEU 99 99 99 LEU LEU D . n A 1 100 LYS 100 100 100 LYS LYS D . n A 1 101 GLU 101 101 101 GLU GLU D . n A 1 102 LEU 102 102 102 LEU LEU D . n A 1 103 GLU 103 103 103 GLU GLU D . n A 1 104 ASP 104 104 104 ASP ASP D . n A 1 105 GLU 105 105 105 GLU GLU D . n A 1 106 GLN 106 106 106 GLN GLN D . n A 1 107 ARG 107 107 107 ARG ARG D . n A 1 108 ASN 108 108 108 ASN ASN D . n A 1 109 GLU 109 109 109 GLU GLU D . n A 1 110 LEU 110 110 110 LEU LEU D . n A 1 111 VAL 111 111 111 VAL VAL D . n A 1 112 ARG 112 112 112 ARG ARG D . n A 1 113 LEU 113 113 113 LEU LEU D . n A 1 114 LYS 114 114 114 LYS LYS D . n A 1 115 TYR 115 115 115 TYR TYR D . n A 1 116 ASN 116 116 116 ASN ASN D . n A 1 117 ASP 117 117 117 ASP ASP D . n A 1 118 LYS 118 118 118 LYS LYS D . n A 1 119 ILE 119 119 119 ILE ILE D . n A 1 120 LYS 120 120 120 LYS LYS D . n A 1 121 GLU 121 121 121 GLU GLU D . n A 1 122 LYS 122 122 122 LYS LYS D . n A 1 123 PHE 123 123 123 PHE PHE D . n A 1 124 GLY 124 124 124 GLY GLY D . n A 1 125 LYS 125 125 125 LYS LYS D . n A 1 126 GLU 126 126 126 GLU GLU D . n A 1 127 LEU 127 127 127 LEU LEU D . n A 1 128 GLU 128 128 128 GLU GLU D . n A 1 129 GLU 129 129 129 GLU GLU D . n A 1 130 VAL 130 130 130 VAL VAL D . n A 1 131 TYR 131 131 131 TYR TYR D . n A 1 132 ASN 132 132 132 ASN ASN D . n A 1 133 PHE 133 133 133 PHE PHE D . n A 1 134 MET 134 134 134 MET MET D . n A 1 135 ASN 135 135 135 ASN ASN D . n A 1 136 GLY 136 136 136 GLY GLY D . n A 1 137 GLU 137 137 137 GLU GLU D . n A 1 138 ALA 138 138 138 ALA ALA D . n A 1 139 ASN 139 139 139 ASN ASN D . n A 1 140 ALA 140 140 140 ALA ALA D . n A 1 141 GLU 141 141 141 GLU GLU D . n A 1 142 ILE 142 142 142 ILE ILE D . n A 1 143 GLU 143 143 143 GLU GLU D . n A 1 144 ASP 144 144 144 ASP ASP D . n A 1 145 GLU 145 145 145 GLU GLU D . n A 1 146 LYS 146 146 146 LYS LYS D . n A 1 147 GLN 147 147 147 GLN GLN D . n A 1 148 PHE 148 148 148 PHE PHE D . n A 1 149 ASP 149 149 149 ASP ASP D . n A 1 150 ILE 150 150 150 ILE ILE D . n A 1 151 LEU 151 151 151 LEU LEU D . n A 1 152 ASN 152 152 152 ASN ASN D . n A 1 153 LYS 153 153 153 LYS LYS D . n A 1 154 ALA 154 154 154 ALA ALA D . n A 1 155 VAL 155 155 155 VAL VAL D . n A 1 156 THR 156 156 156 THR THR D . n A 1 157 SER 157 157 157 SER SER D . n A 1 158 TYR 158 158 158 TYR TYR D . n A 1 159 ASN 159 159 159 ASN ASN D . n A 1 160 LYS 160 160 160 LYS LYS D . n A 1 161 ILE 161 161 161 ILE ILE D . n A 1 162 LEU 162 162 162 LEU LEU D . n A 1 163 THR 163 163 163 THR THR D . n A 1 164 GLU 164 164 164 GLU GLU D . n A 1 165 GLU 165 165 165 GLU GLU D . n A 1 166 ASP 166 166 166 ASP ASP D . n A 1 167 LEU 167 167 167 LEU LEU D . n A 1 168 GLN 168 168 168 GLN GLN D . n A 1 169 MET 169 169 169 MET MET D . n A 1 170 ARG 170 170 170 ARG ARG D . n A 1 171 ARG 171 171 171 ARG ARG D . n A 1 172 LEU 172 172 172 LEU LEU D . n A 1 173 ALA 173 173 173 ALA ALA D . n A 1 174 THR 174 174 174 THR THR D . n A 1 175 ALA 175 175 175 ALA ALA D . n A 1 176 LEU 176 176 176 LEU LEU D . n A 1 177 GLN 177 177 177 GLN GLN D . n A 1 178 LYS 178 178 178 LYS LYS D . n A 1 179 GLU 179 179 179 GLU GLU D . n A 1 180 ILE 180 180 180 ILE ILE D . n A 1 181 GLY 181 181 181 GLY GLY D . n A 1 182 GLU 182 182 182 GLU GLU D . n A 1 183 ARG 183 183 183 ARG ARG D . n A 1 184 THR 184 184 184 THR THR D . n A 1 185 HIS 185 185 185 HIS HIS D . n A 1 186 ALA 186 186 186 ALA ALA D . n A 1 187 GLU 187 187 187 GLU GLU D . n A 1 188 THR 188 188 188 THR THR D . n A 1 189 VAL 189 189 189 VAL VAL D . n A 1 190 MET 190 190 190 MET MET D . n A 1 191 VAL 191 191 191 VAL VAL D . n A 1 192 LYS 192 192 192 LYS LYS D . n A 1 193 GLU 193 193 193 GLU GLU D . n A 1 194 TYR 194 194 194 TYR TYR D . n A 1 195 ARG 195 195 195 ARG ARG D . n A 1 196 ASP 196 196 196 ASP ASP D . n A 1 197 LYS 197 197 197 LYS LYS D . n A 1 198 ILE 198 198 198 ILE ILE D . n A 1 199 ASP 199 199 199 ASP ASP D . n A 1 200 ALA 200 200 200 ALA ALA D . n A 1 201 LEU 201 201 201 LEU LEU D . n A 1 202 LYS 202 202 202 LYS LYS D . n A 1 203 ASN 203 203 203 ASN ASN D . n A 1 204 ALA 204 204 204 ALA ALA D . n A 1 205 ILE 205 205 205 ILE ILE D . n A 1 206 GLU 206 206 206 GLU GLU D . n A 1 207 VAL 207 207 207 VAL VAL D . n A 1 208 GLU 208 208 208 GLU GLU D . n A 1 209 ARG 209 209 209 ARG ARG D . n A 1 210 ASP 210 210 210 ASP ASP D . n A 1 211 GLY 211 211 211 GLY GLY D . n A 1 212 MET 212 212 212 MET MET D . n A 1 213 GLN 213 213 213 GLN GLN D . n A 1 214 GLU 214 214 214 GLU GLU D . n A 1 215 GLU 215 215 215 GLU GLU D . n A 1 216 ALA 216 216 216 ALA ALA D . n A 1 217 ILE 217 217 217 ILE ILE D . n A 1 218 GLN 218 218 218 GLN GLN D . n A 1 219 GLU 219 219 219 GLU GLU D . n A 1 220 ILE 220 220 220 ILE ILE D . n A 1 221 ALA 221 221 221 ALA ALA D . n A 1 222 GLY 222 222 222 GLY GLY D . n A 1 223 MET 223 223 223 MET MET D . n A 1 224 THR 224 224 224 THR THR D . n A 1 225 ALA 225 225 225 ALA ALA D . n A 1 226 ASP 226 226 226 ASP ASP D . n A 1 227 VAL 227 227 227 VAL VAL D . n A 1 228 LEU 228 228 228 LEU LEU D . n A 1 229 GLU 229 229 229 GLU GLU D . n A 1 230 ALA 230 230 230 ALA ALA D . n A 1 231 ALA 231 231 231 ALA ALA D . n A 1 232 SER 232 232 232 SER SER D . n A 1 233 GLU 233 233 233 GLU GLU D . n A 1 234 GLU 234 234 234 GLU GLU D . n A 1 235 VAL 235 235 235 VAL VAL D . n A 1 236 PRO 236 236 236 PRO PRO D . n A 1 237 LEU 237 237 237 LEU LEU D . n A 1 238 ILE 238 238 238 ILE ILE D . n A 1 239 GLY 239 239 239 GLY GLY D . n A 1 240 ALA 240 240 240 ALA ALA D . n A 1 241 GLY 241 241 241 GLY GLY D . n A 1 242 MET 242 242 242 MET MET D . n A 1 243 ALA 243 243 243 ALA ALA D . n A 1 244 THR 244 244 244 THR THR D . n A 1 245 ALA 245 245 245 ALA ALA D . n A 1 246 VAL 246 246 246 VAL VAL D . n A 1 247 ALA 247 247 247 ALA ALA D . n A 1 248 THR 248 248 248 THR THR D . n A 1 249 GLY 249 249 249 GLY GLY D . n A 1 250 ARG 250 250 250 ARG ARG D . n A 1 251 ALA 251 251 251 ALA ALA D . n A 1 252 ILE 252 252 252 ILE ILE D . n A 1 253 GLU 253 253 253 GLU GLU D . n A 1 254 GLY 254 254 254 GLY GLY D . n A 1 255 ALA 255 255 255 ALA ALA D . n A 1 256 TYR 256 256 256 TYR TYR D . n A 1 257 LYS 257 257 257 LYS LYS D . n A 1 258 LEU 258 258 258 LEU LEU D . n A 1 259 LYS 259 259 259 LYS LYS D . n A 1 260 LYS 260 260 260 LYS LYS D . n A 1 261 VAL 261 261 261 VAL VAL D . n A 1 262 ILE 262 262 262 ILE ILE D . n A 1 263 ASN 263 263 263 ASN ASN D . n A 1 264 ALA 264 264 264 ALA ALA D . n A 1 265 LEU 265 265 265 LEU LEU D . n A 1 266 SER 266 266 266 SER SER D . n A 1 267 GLY 267 267 267 GLY GLY D . n A 1 268 ILE 268 268 268 ILE ILE D . n A 1 269 ASP 269 269 269 ASP ASP D . n A 1 270 LEU 270 270 270 LEU LEU D . n A 1 271 THR 271 271 271 THR THR D . n A 1 272 HIS 272 272 272 HIS HIS D . n A 1 273 LEU 273 273 273 LEU LEU D . n A 1 274 ARG 274 274 274 ARG ARG D . n A 1 275 THR 275 275 275 THR THR D . n A 1 276 PRO 276 276 276 PRO PRO D . n A 1 277 LYS 277 277 277 LYS LYS D . n A 1 278 ILE 278 278 278 ILE ILE D . n A 1 279 GLU 279 279 279 GLU GLU D . n A 1 280 PRO 280 280 280 PRO PRO D . n A 1 281 SER 281 281 281 SER SER D . n A 1 282 VAL 282 282 282 VAL VAL D . n A 1 283 VAL 283 283 283 VAL VAL D . n A 1 284 SER 284 284 284 SER SER D . n A 1 285 THR 285 285 285 THR THR D . n A 1 286 ILE 286 286 286 ILE ILE D . n A 1 287 LEU 287 287 287 LEU LEU D . n A 1 288 GLU 288 288 288 GLU GLU D . n A 1 289 TYR 289 289 289 TYR TYR D . n A 1 290 ARG 290 290 290 ARG ARG D . n A 1 291 ALA 291 291 291 ALA ALA D . n A 1 292 LYS 292 292 292 LYS LYS D . n A 1 293 GLU 293 293 293 GLU GLU D . n A 1 294 ILE 294 294 294 ILE ILE D . n A 1 295 PRO 295 295 295 PRO PRO D . n A 1 296 ASP 296 296 296 ASP ASP D . n A 1 297 ASN 297 297 297 ASN ASN D . n A 1 298 ALA 298 298 298 ALA ALA D . n A 1 299 LEU 299 299 299 LEU LEU D . n A 1 300 ALA 300 300 300 ALA ALA D . n A 1 301 VAL 301 301 301 VAL VAL D . n A 1 302 SER 302 302 302 SER SER D . n A 1 303 VAL 303 303 303 VAL VAL D . n A 1 304 LEU 304 304 304 LEU LEU D . n A 1 305 SER 305 305 305 SER SER D . n A 1 306 LYS 306 306 306 LYS LYS D . n A 1 307 ASN 307 307 307 ASN ASN D . n A 1 308 ARG 308 308 308 ARG ARG D . n A 1 309 ALA 309 309 309 ALA ALA D . n A 1 310 ILE 310 310 310 ILE ILE D . n A 1 311 GLN 311 311 311 GLN GLN D . n A 1 312 GLU 312 312 312 GLU GLU D . n A 1 313 ASN 313 313 313 ASN ASN D . n A 1 314 HIS 314 314 314 HIS HIS D . n A 1 315 LYS 315 315 315 LYS LYS D . n A 1 316 GLU 316 316 316 GLU GLU D . n A 1 317 LEU 317 317 317 LEU LEU D . n A 1 318 MET 318 318 318 MET MET D . n A 1 319 HIS 319 319 319 HIS HIS D . n A 1 320 ILE 320 320 320 ILE ILE D . n A 1 321 LYS 321 321 321 LYS LYS D . n A 1 322 ASN 322 322 322 ASN ASN D . n A 1 323 GLU 323 323 323 GLU GLU D . n A 1 324 ILE 324 324 324 ILE ILE D . n A 1 325 LEU 325 325 325 LEU LEU D . n A 1 326 PRO 326 326 326 PRO PRO D . n A 1 327 ARG 327 327 327 ARG ARG D . n A 1 328 PHE 328 328 328 PHE PHE D . n A 1 329 LYS 329 329 329 LYS LYS D . n A 1 330 LYS 330 330 330 LYS LYS D . n A 1 331 ALA 331 331 331 ALA ALA D . n A 1 332 MET 332 332 332 MET MET D . n A 1 333 ASP 333 333 333 ASP ASP D . n A 1 334 GLU 334 334 334 GLU GLU D . n A 1 335 GLU 335 335 335 GLU GLU D . n A 1 336 LYS 336 336 336 LYS LYS D . n A 1 337 GLU 337 337 337 GLU GLU D . n A 1 338 ILE 338 338 338 ILE ILE D . n A 1 339 CYS 339 339 339 CYS CYS D . n A 1 340 GLY 340 340 340 GLY GLY D . n A 1 341 ILE 341 341 341 ILE ILE D . n A 1 342 GLU 342 342 342 GLU GLU D . n A 1 343 ASP 343 343 343 ASP ASP D . n A 1 344 LYS 344 344 344 LYS LYS D . n A 1 345 VAL 345 345 345 VAL VAL D . n A 1 346 ILE 346 346 346 ILE ILE D . n A 1 347 HIS 347 347 347 HIS HIS D . n A 1 348 PRO 348 348 348 PRO PRO D . n A 1 349 LYS 349 349 349 LYS LYS D . n A 1 350 VAL 350 350 350 VAL VAL D . n A 1 351 MET 351 351 351 MET MET D . n A 1 352 MET 352 352 352 MET MET D . n A 1 353 LYS 353 353 353 LYS LYS D . n A 1 354 PHE 354 354 354 PHE PHE D . n A 1 355 LYS 355 355 355 LYS LYS D . n A 1 356 ILE 356 356 356 ILE ILE D . n A 1 357 PRO 357 357 357 PRO PRO D . n A 1 358 ARG 358 358 358 ARG ARG D . n A 1 359 ALA 359 359 359 ALA ALA D . n A 1 360 GLN 360 360 360 GLN GLN D . n A 1 361 GLN 361 361 361 GLN GLN D . n A 1 362 PRO 362 362 362 PRO PRO D . n A 1 363 GLN 363 363 363 GLN GLN D . n A 1 364 ILE 364 364 364 ILE ILE D . n A 1 365 HIS 365 365 365 HIS HIS D . n A 1 366 VAL 366 366 366 VAL VAL D . n A 1 367 TYR 367 367 367 TYR TYR D . n A 1 368 SER 368 368 368 SER SER D . n A 1 369 ALA 369 369 369 ALA ALA D . n A 1 370 PRO 370 370 370 PRO PRO D . n A 1 371 TRP 371 371 371 TRP TRP D . n A 1 372 ASP 372 372 372 ASP ASP D . n A 1 373 SER 373 373 373 SER SER D . n A 1 374 ASP 374 374 374 ASP ASP D . n A 1 375 ASP 375 375 375 ASP ASP D . n A 1 376 VAL 376 376 376 VAL VAL D . n A 1 377 PHE 377 377 377 PHE PHE D . n A 1 378 PHE 378 378 378 PHE PHE D . n A 1 379 PHE 379 379 379 PHE PHE D . n A 1 380 HIS 380 380 380 HIS HIS D . n A 1 381 CYS 381 381 381 CYS CYS D . n A 1 382 ILE 382 382 382 ILE ILE D . n A 1 383 SER 383 383 383 SER SER D . n A 1 384 HIS 384 384 384 HIS HIS D . n A 1 385 HIS 385 385 385 HIS HIS D . n A 1 386 HIS 386 386 386 HIS HIS D . n A 1 387 ALA 387 387 387 ALA ALA D . n A 1 388 ASN 388 388 388 ASN ASN D . n A 1 389 GLU 389 389 389 GLU GLU D . n A 1 390 SER 390 390 390 SER SER D . n A 1 391 PHE 391 391 391 PHE PHE D . n A 1 392 PHE 392 392 392 PHE PHE D . n A 1 393 LEU 393 393 393 LEU LEU D . n A 1 394 GLY 394 394 394 GLY GLY D . n A 1 395 PHE 395 395 395 PHE PHE D . n A 1 396 ASP 396 396 396 ASP ASP D . n A 1 397 LEU 397 397 397 LEU LEU D . n A 1 398 SER 398 398 398 SER SER D . n A 1 399 ILE 399 399 399 ILE ILE D . n A 1 400 ASP 400 400 400 ASP ASP D . n A 1 401 LEU 401 401 401 LEU LEU D . n A 1 402 VAL 402 402 402 VAL VAL D . n A 1 403 HIS 403 403 403 HIS HIS D . n A 1 404 TYR 404 404 404 TYR TYR D . n A 1 405 GLU 405 405 405 GLU GLU D . n A 1 406 ASP 406 406 406 ASP ASP D . n A 1 407 LEU 407 407 407 LEU LEU D . n A 1 408 THR 408 408 408 THR THR D . n A 1 409 ALA 409 409 409 ALA ALA D . n A 1 410 HIS 410 410 410 HIS HIS D . n A 1 411 TRP 411 411 411 TRP TRP D . n A 1 412 HIS 412 412 412 HIS HIS D . n A 1 413 ALA 413 413 413 ALA ALA D . n A 1 414 LEU 414 414 414 LEU LEU D . n A 1 415 GLY 415 415 415 GLY GLY D . n A 1 416 ALA 416 416 416 ALA ALA D . n A 1 417 ALA 417 417 417 ALA ALA D . n A 1 418 GLN 418 418 418 GLN GLN D . n A 1 419 THR 419 419 419 THR THR D . n A 1 420 ALA 420 420 420 ALA ALA D . n A 1 421 ALA 421 421 421 ALA ALA D . n A 1 422 GLY 422 422 422 GLY GLY D . n A 1 423 ARG 423 423 423 ARG ARG D . n A 1 424 THR 424 424 424 THR THR D . n A 1 425 LEU 425 425 425 LEU LEU D . n A 1 426 THR 426 426 426 THR THR D . n A 1 427 GLU 427 427 427 GLU GLU D . n A 1 428 ALA 428 428 428 ALA ALA D . n A 1 429 TYR 429 429 429 TYR TYR D . n A 1 430 ARG 430 430 430 ARG ARG D . n A 1 431 GLU 431 431 431 GLU GLU D . n A 1 432 PHE 432 432 432 PHE PHE D . n A 1 433 LEU 433 433 433 LEU LEU D . n A 1 434 ASN 434 434 434 ASN ASN D . n A 1 435 LEU 435 435 435 LEU LEU D . n A 1 436 ALA 436 436 436 ALA ALA D . n A 1 437 ILE 437 437 437 ILE ILE D . n A 1 438 SER 438 438 438 SER SER D . n A 1 439 ASN 439 439 439 ASN ASN D . n A 1 440 ALA 440 440 440 ALA ALA D . n A 1 441 PHE 441 441 441 PHE PHE D . n A 1 442 GLY 442 442 442 GLY GLY D . n A 1 443 THR 443 443 443 THR THR D . n A 1 444 GLN 444 444 444 GLN GLN D . n A 1 445 MET 445 445 445 MET MET D . n A 1 446 HIS 446 446 446 HIS HIS D . n A 1 447 THR 447 447 447 THR THR D . n A 1 448 ARG 448 448 448 ARG ARG D . n A 1 449 ARG 449 449 449 ARG ARG D . n A 1 450 LEU 450 450 450 LEU LEU D . n A 1 451 VAL 451 451 451 VAL VAL D . n A 1 452 ARG 452 452 452 ARG ARG D . n A 1 453 SER 453 453 453 SER SER D . n A 1 454 LYS 454 454 454 LYS LYS D . n A 1 455 THR 455 455 455 THR THR D . n A 1 456 VAL 456 456 456 VAL VAL D . n A 1 457 HIS 457 457 457 HIS HIS D . n A 1 458 PRO 458 458 458 PRO PRO D . n A 1 459 ILE 459 459 459 ILE ILE D . n A 1 460 TYR 460 460 460 TYR TYR D . n A 1 461 LEU 461 461 461 LEU LEU D . n A 1 462 GLY 462 462 462 GLY GLY D . n A 1 463 SER 463 463 463 SER SER D . n A 1 464 LEU 464 464 464 LEU LEU D . n A 1 465 HIS 465 465 465 HIS HIS D . n A 1 466 TYR 466 466 466 TYR TYR D . n A 1 467 ASP 467 467 467 ASP ASP D . n A 1 468 ILE 468 468 468 ILE ILE D . n A 1 469 SER 469 469 469 SER SER D . n A 1 470 PHE 470 470 470 PHE PHE D . n A 1 471 SER 471 471 471 SER SER D . n A 1 472 ASP 472 472 472 ASP ASP D . n A 1 473 LEU 473 473 473 LEU LEU D . n A 1 474 ARG 474 474 474 ARG ARG D . n A 1 475 GLY 475 475 475 GLY GLY D . n A 1 476 ASN 476 476 476 ASN ASN D . n A 1 477 ALA 477 477 477 ALA ALA D . n A 1 478 GLN 478 478 478 GLN GLN D . n A 1 479 ARG 479 479 479 ARG ARG D . n A 1 480 ILE 480 480 480 ILE ILE D . n A 1 481 VAL 481 481 481 VAL VAL D . n A 1 482 TYR 482 482 482 TYR TYR D . n A 1 483 ASP 483 483 483 ASP ASP D . n A 1 484 ASP 484 484 484 ASP ASP D . n A 1 485 GLU 485 485 485 GLU GLU D . n A 1 486 LEU 486 486 486 LEU LEU D . n A 1 487 GLN 487 487 487 GLN GLN D . n A 1 488 MET 488 488 488 MET MET D . n A 1 489 HIS 489 489 489 HIS HIS D . n A 1 490 ILE 490 490 490 ILE ILE D . n A 1 491 LEU 491 491 491 LEU LEU D . n A 1 492 ARG 492 492 492 ARG ARG D . n A 1 493 GLY 493 493 493 GLY GLY D . n A 1 494 PRO 494 494 494 PRO PRO D . n A 1 495 ILE 495 495 495 ILE ILE D . n A 1 496 HIS 496 496 496 HIS HIS D . n A 1 497 PHE 497 497 497 PHE PHE D . n A 1 498 GLN 498 498 498 GLN GLN D . n A 1 499 ARG 499 499 499 ARG ARG D . n A 1 500 ARG 500 500 500 ARG ARG D . n A 1 501 ALA 501 501 501 ALA ALA D . n A 1 502 ILE 502 502 502 ILE ILE D . n A 1 503 LEU 503 503 503 LEU LEU D . n A 1 504 GLY 504 504 504 GLY GLY D . n A 1 505 ALA 505 505 505 ALA ALA D . n A 1 506 LEU 506 506 506 LEU LEU D . n A 1 507 LYS 507 507 507 LYS LYS D . n A 1 508 PHE 508 508 508 PHE PHE D . n A 1 509 GLY 509 509 509 GLY GLY D . n A 1 510 CYS 510 510 510 CYS CYS D . n A 1 511 LYS 511 511 511 LYS LYS D . n A 1 512 VAL 512 512 512 VAL VAL D . n A 1 513 LEU 513 513 513 LEU LEU D . n A 1 514 GLY 514 514 514 GLY GLY D . n A 1 515 ASP 515 515 515 ASP ASP D . n A 1 516 ARG 516 516 516 ARG ARG D . n A 1 517 LEU 517 517 517 LEU LEU D . n A 1 518 ASP 518 518 518 ASP ASP D . n A 1 519 VAL 519 519 519 VAL VAL D . n A 1 520 PRO 520 520 520 PRO PRO D . n A 1 521 LEU 521 521 521 LEU LEU D . n A 1 522 PHE 522 522 ? ? ? D . n A 1 523 LEU 523 523 ? ? ? D . n A 1 524 ARG 524 524 ? ? ? D . n A 1 525 ASN 525 525 ? ? ? D . n A 1 526 ALA 526 526 ? ? ? D . n # _cell.entry_id 3J9E _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3J9E _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3J9E _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine.entry_id 3J9E _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_d_res_high 3.3 _refine.ls_d_res_low 3.3 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_number_reflns_obs 785323 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1595 _refine.ls_R_factor_R_work 0.1595 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1416 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 0.0600 _refine.ls_number_reflns_R_free 456 _refine.ls_number_reflns_R_work 784867 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 66.0333 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2800 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 569.480 _refine.B_iso_min 14.990 _refine.pdbx_overall_phase_error 15.5200 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4098 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4098 _refine_hist.d_res_high 3.500 _refine_hist.d_res_low 39.924 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' f_bond_d 3558 0.019 ? ? ? 'ELECTRON MICROSCOPY' f_angle_d 4789 2.029 ? ? ? 'ELECTRON MICROSCOPY' f_chiral_restr 535 0.085 ? ? ? 'ELECTRON MICROSCOPY' f_plane_restr 620 0.008 ? ? ? 'ELECTRON MICROSCOPY' f_dihedral_angle_d 1350 20.933 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 3.500 4.0063 3 100.0 261913 . 0.2468 0.2123 . 168 . 262081 . 'ELECTRON MICROSCOPY' . 4.0063 5.0459 3 100.0 261555 . 0.1235 0.1195 . 120 . 261675 . 'ELECTRON MICROSCOPY' . 5.0459 39.9263 3 100.0 261399 . 0.1416 0.1171 . 168 . 261567 . 'ELECTRON MICROSCOPY' . # _database_PDB_matrix.entry_id 3J9E _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3J9E _struct.title 'Atomic structure of a non-enveloped virus reveals pH sensors for a coordinated process of cell entry' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3J9E _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'non-enveloped virus, cell entry, pH sensor, VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code K7QP12_9REOV _struct_ref.pdbx_db_accession K7QP12 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGKVIRSLNRFGKKVGNALTSNTAKKIYSTIGKAAERFAESEIGSAAIDGLVQGSVHSIITGESYGESVKQAVLLNVLGS GEEIPDPLSPGERGIQAKLKELEDEQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNK ILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMTADVLEAASEEVPLIGA GMATAVATGRAIEGAYKLKKVINALSGIDLTHLRTPKIEPSVVSTILEYRAKEIPDNALAVSVLSKNRAIQENHKELMHI KNEILPRFKKAMDEEKEICGIEDKVIHPKVMMKFKIPRAQQPQIHVYSAPWDSDDVFFFHCISHHHANESFFLGFDLSID LVHYEDLTAHWHALGAAQTAAGRTLTEAYREFLNLAISNAFGTQMHTRRLVRSKTVHPIYLGSLHYDISFSDLRGNAQRI VYDDELQMHILRGPIHFQRRAILGALKFGCKVLGDRLDVPLFLRNA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3J9E _struct_ref_seq.pdbx_strand_id D _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 526 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession K7QP12 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 526 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 526 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? ALA A 39 ? ASN D 22 ALA D 39 1 ? 18 HELX_P HELX_P2 2 SER A 41 ? ALA A 46 ? SER D 41 ALA D 46 5 ? 6 HELX_P HELX_P3 3 ALA A 47 ? GLY A 66 ? ALA D 47 GLY D 66 1 ? 20 HELX_P HELX_P4 4 SER A 89 ? TYR A 115 ? SER D 89 TYR D 115 1 ? 27 HELX_P HELX_P5 5 TYR A 115 ? PHE A 123 ? TYR D 115 PHE D 123 1 ? 9 HELX_P HELX_P6 6 GLY A 124 ? MET A 134 ? GLY D 124 MET D 134 1 ? 11 HELX_P HELX_P7 7 LYS A 146 ? GLU A 179 ? LYS D 146 GLU D 179 1 ? 34 HELX_P HELX_P8 8 THR A 184 ? ASP A 210 ? THR D 184 ASP D 210 1 ? 27 HELX_P HELX_P9 9 THR A 224 ? ALA A 231 ? THR D 224 ALA D 231 1 ? 8 HELX_P HELX_P10 10 ALA A 251 ? TYR A 256 ? ALA D 251 TYR D 256 1 ? 6 HELX_P HELX_P11 11 LYS A 257 ? SER A 266 ? LYS D 257 SER D 266 1 ? 10 HELX_P HELX_P12 12 GLU A 279 ? TYR A 289 ? GLU D 279 TYR D 289 1 ? 11 HELX_P HELX_P13 13 PRO A 295 ? ILE A 324 ? PRO D 295 ILE D 324 1 ? 30 HELX_P HELX_P14 14 ILE A 324 ? GLY A 340 ? ILE D 324 GLY D 340 1 ? 17 HELX_P HELX_P15 15 HIS A 347 ? PHE A 354 ? HIS D 347 PHE D 354 1 ? 8 HELX_P HELX_P16 16 PRO A 357 ? GLN A 361 ? PRO D 357 GLN D 361 5 ? 5 HELX_P HELX_P17 17 HIS A 384 ? ASN A 388 ? HIS D 384 ASN D 388 5 ? 5 HELX_P HELX_P18 18 THR A 424 ? ASN A 439 ? THR D 424 ASN D 439 1 ? 16 HELX_P HELX_P19 19 ARG A 449 ? SER A 453 ? ARG D 449 SER D 453 5 ? 5 HELX_P HELX_P20 20 SER A 469 ? ASP A 483 ? SER D 469 ASP D 483 1 ? 15 HELX_P HELX_P21 21 ASP A 483 ? LEU A 491 ? ASP D 483 LEU D 491 1 ? 9 HELX_P HELX_P22 22 PRO A 494 ? PHE A 508 ? PRO D 494 PHE D 508 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 15 A . ? VAL 15 D GLY 16 A ? GLY 16 D 1 -0.72 2 LEU 19 A . ? LEU 19 D THR 20 A ? THR 20 D 1 -10.60 3 SER 45 A . ? SER 45 D ALA 46 A ? ALA 46 D 1 26.29 4 LEU 78 A . ? LEU 78 D GLY 79 A ? GLY 79 D 1 -29.24 5 ALA 140 A . ? ALA 140 D GLU 141 A ? GLU 141 D 1 -5.33 6 GLY 340 A . ? GLY 340 D ILE 341 A ? ILE 341 D 1 9.21 7 ALA 421 A . ? ALA 421 D GLY 422 A ? GLY 422 D 1 9.96 8 HIS 446 A . ? HIS 446 D THR 447 A ? THR 447 D 1 3.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 217 ? GLU A 219 ? ILE D 217 GLU D 219 A 2 ALA A 72 ? LEU A 74 ? ALA D 72 LEU D 74 A 3 CYS A 510 ? VAL A 512 ? CYS D 510 VAL D 512 B 1 LEU A 401 ? ASP A 406 ? LEU D 401 ASP D 406 B 2 PHE A 391 ? ASP A 396 ? PHE D 391 ASP D 396 B 3 VAL A 376 ? CYS A 381 ? VAL D 376 CYS D 381 B 4 ILE A 364 ? SER A 368 ? ILE D 364 SER D 368 B 5 ILE A 459 ? LEU A 464 ? ILE D 459 LEU D 464 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 218 ? O GLN D 218 N LEU A 74 ? N LEU D 74 A 2 3 N VAL A 73 ? N VAL D 73 O LYS A 511 ? O LYS D 511 B 1 2 O HIS A 403 ? O HIS D 403 N GLY A 394 ? N GLY D 394 B 2 3 O LEU A 393 ? O LEU D 393 N PHE A 379 ? N PHE D 379 B 3 4 O PHE A 378 ? O PHE D 378 N TYR A 367 ? N TYR D 367 B 4 5 N SER A 368 ? N SER D 368 O ILE A 459 ? O ILE D 459 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O D ALA 138 ? ? N D ASN 139 ? ? 0.83 2 1 O D LEU 513 ? ? N D GLY 514 ? ? 1.04 3 1 O D GLY 442 ? ? N D THR 443 ? ? 1.08 4 1 N D LYS 454 ? ? OG1 D THR 455 ? ? 1.22 5 1 O D LYS 13 ? ? N D LYS 14 ? ? 1.25 6 1 CA D LYS 454 ? ? OG1 D THR 455 ? ? 1.27 7 1 O D LYS 13 ? ? CA D LYS 14 ? ? 1.31 8 1 O D LYS 13 ? ? CB D LYS 14 ? ? 1.40 9 1 O D GLU 67 ? ? N D SER 68 ? ? 1.46 10 1 O D LEU 513 ? ? CA D GLY 514 ? ? 1.51 11 1 C D LYS 13 ? ? CA D LYS 14 ? ? 1.57 12 1 O D GLU 143 ? ? N D GLU 145 ? ? 1.63 13 1 CA D LYS 13 ? ? N D LYS 14 ? ? 1.69 14 1 O D LYS 13 ? ? CG D LYS 14 ? ? 1.70 15 1 C D LYS 454 ? ? CB D THR 455 ? ? 1.71 16 1 O D SER 453 ? ? CG2 D THR 455 ? ? 1.77 17 1 C D SER 453 ? ? CG2 D THR 455 ? ? 1.79 18 1 OG1 D THR 224 ? ? OD1 D ASP 226 ? ? 1.93 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C D LYS 13 ? ? N D LYS 14 ? ? 0.842 1.336 -0.494 0.023 Y 2 1 C D GLU 67 ? ? N D SER 68 ? ? 0.743 1.336 -0.593 0.023 Y 3 1 CB D GLU 83 ? ? CG D GLU 83 ? ? 1.710 1.517 0.193 0.019 N 4 1 CG D GLU 83 ? ? CD D GLU 83 ? ? 1.652 1.515 0.137 0.015 N 5 1 CD D GLU 83 ? ? OE2 D GLU 83 ? ? 1.320 1.252 0.068 0.011 N 6 1 C D LEU 513 ? ? N D GLY 514 ? ? 1.521 1.336 0.185 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA D LYS 13 ? ? C D LYS 13 ? ? N D LYS 14 ? ? 85.42 117.20 -31.78 2.20 Y 2 1 O D LYS 13 ? ? C D LYS 13 ? ? N D LYS 14 ? ? 70.70 122.70 -52.00 1.60 Y 3 1 C D LYS 13 ? ? N D LYS 14 ? ? CA D LYS 14 ? ? 81.35 121.70 -40.35 2.50 Y 4 1 CA D GLU 67 ? ? C D GLU 67 ? ? N D SER 68 ? ? 132.23 117.20 15.03 2.20 Y 5 1 O D GLU 67 ? ? C D GLU 67 ? ? N D SER 68 ? ? 91.99 122.70 -30.71 1.60 Y 6 1 CA D LEU 99 ? ? CB D LEU 99 ? ? CG D LEU 99 ? ? 96.27 115.30 -19.03 2.30 N 7 1 N D GLY 124 ? ? CA D GLY 124 ? ? C D GLY 124 ? ? 132.78 113.10 19.68 2.50 N 8 1 CA D ALA 138 ? ? C D ALA 138 ? ? N D ASN 139 ? ? 142.80 117.20 25.60 2.20 Y 9 1 O D ALA 138 ? ? C D ALA 138 ? ? N D ASN 139 ? ? 38.51 122.70 -84.19 1.60 Y 10 1 CA D LEU 401 ? ? CB D LEU 401 ? ? CG D LEU 401 ? ? 130.32 115.30 15.02 2.30 N 11 1 CA D LEU 513 ? ? C D LEU 513 ? ? N D GLY 514 ? ? 101.88 116.20 -14.32 2.00 Y 12 1 O D LEU 513 ? ? C D LEU 513 ? ? N D GLY 514 ? ? 42.69 123.20 -80.51 1.70 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG D 10 ? ? -158.44 -3.97 2 1 PHE D 11 ? ? 97.61 -52.48 3 1 LYS D 14 ? ? 57.24 -116.53 4 1 VAL D 15 ? ? 47.58 83.26 5 1 SER D 21 ? ? -81.34 -123.45 6 1 ASN D 22 ? ? 66.43 -28.42 7 1 ALA D 39 ? ? 130.47 63.36 8 1 GLU D 40 ? ? 59.54 171.20 9 1 ALA D 46 ? ? 78.42 -177.80 10 1 GLU D 67 ? ? -62.81 -174.44 11 1 SER D 68 ? ? 135.49 122.12 12 1 LEU D 75 ? ? -63.01 67.55 13 1 GLU D 82 ? ? -159.64 -36.69 14 1 GLU D 83 ? ? 53.48 -172.98 15 1 PRO D 87 ? ? -86.67 48.48 16 1 LEU D 88 ? ? -163.36 15.20 17 1 LYS D 122 ? ? -70.36 -71.10 18 1 MET D 134 ? ? -85.20 -100.80 19 1 ASN D 139 ? ? -141.12 32.11 20 1 ILE D 142 ? ? 51.43 -173.63 21 1 GLU D 143 ? ? 65.30 -37.18 22 1 GLU D 179 ? ? 69.05 98.28 23 1 ILE D 180 ? ? 39.97 -84.37 24 1 SER D 232 ? ? -148.70 -20.40 25 1 THR D 244 ? ? -98.05 -159.14 26 1 ALA D 245 ? ? 62.75 91.05 27 1 LEU D 265 ? ? -92.80 -75.63 28 1 TYR D 289 ? ? -114.05 74.38 29 1 ALA D 291 ? ? -173.03 65.14 30 1 LYS D 292 ? ? -162.46 90.52 31 1 GLU D 293 ? ? -35.35 120.00 32 1 CYS D 339 ? ? -161.59 42.85 33 1 ILE D 341 ? ? 60.93 92.05 34 1 GLN D 363 ? ? -129.81 -162.08 35 1 TRP D 371 ? ? -115.57 -80.46 36 1 ASP D 372 ? ? -157.40 -21.86 37 1 SER D 383 ? ? 66.95 160.99 38 1 ILE D 399 ? ? -98.85 56.66 39 1 ASP D 400 ? ? -11.44 81.20 40 1 HIS D 410 ? ? 71.53 88.20 41 1 ALA D 421 ? ? -88.36 -85.00 42 1 PHE D 441 ? ? -148.82 31.63 43 1 ARG D 448 ? ? 70.69 -2.49 44 1 SER D 453 ? ? 76.92 -151.74 45 1 LEU D 491 ? ? -113.07 63.72 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLU D 67 ? ? SER D 68 ? ? -147.92 2 1 VAL D 77 ? ? LEU D 78 ? ? -149.39 3 1 PHE D 123 ? ? GLY D 124 ? ? -132.64 4 1 ALA D 138 ? ? ASN D 139 ? ? 40.93 5 1 GLY D 249 ? ? ARG D 250 ? ? 147.57 6 1 ALA D 387 ? ? ASN D 388 ? ? -146.68 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 LYS D 13 ? ? -55.03 2 1 GLU D 67 ? ? -36.30 3 1 ALA D 138 ? ? 94.86 4 1 LEU D 513 ? ? 42.99 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C D LYS 13 ? ? N D LYS 14 ? ? 0.84 2 1 C D GLU 67 ? ? N D SER 68 ? ? 0.74 3 1 C D ASP 144 ? ? N D GLU 145 ? ? 4.38 4 1 C D GLY 442 ? ? N D THR 443 ? ? 2.16 5 1 C D LYS 454 ? ? N D THR 455 ? ? 2.55 # _pdbx_refine_tls.pdbx_refine_id 'ELECTRON MICROSCOPY' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -24.9305 _pdbx_refine_tls.origin_y 75.5041 _pdbx_refine_tls.origin_z 325.1532 _pdbx_refine_tls.T[1][1] 0.1911 _pdbx_refine_tls.T[2][2] 0.2500 _pdbx_refine_tls.T[3][3] 0.2419 _pdbx_refine_tls.T[1][2] -0.1254 _pdbx_refine_tls.T[1][3] 0.0028 _pdbx_refine_tls.T[2][3] 0.2057 _pdbx_refine_tls.L[1][1] 0.5346 _pdbx_refine_tls.L[2][2] 0.9542 _pdbx_refine_tls.L[3][3] 0.4702 _pdbx_refine_tls.L[1][2] 0.1312 _pdbx_refine_tls.L[1][3] -0.2021 _pdbx_refine_tls.L[2][3] 0.1479 _pdbx_refine_tls.S[1][1] 0.1767 _pdbx_refine_tls.S[2][2] 0.0029 _pdbx_refine_tls.S[3][3] 0.1641 _pdbx_refine_tls.S[1][2] -0.1100 _pdbx_refine_tls.S[1][3] 0.1097 _pdbx_refine_tls.S[2][3] 0.0320 _pdbx_refine_tls.S[2][1] 0.1660 _pdbx_refine_tls.S[3][1] -0.1197 _pdbx_refine_tls.S[3][2] 0.0463 # _pdbx_refine_tls_group.pdbx_refine_id 'ELECTRON MICROSCOPY' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id D _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id D _pdbx_refine_tls_group.end_auth_seq_id 521 _pdbx_refine_tls_group.selection_details all _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _em_3d_reconstruction.entry_id 3J9E _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'reference match' _em_3d_reconstruction.nominal_pixel_size 1.01 _em_3d_reconstruction.actual_pixel_size 1.01 _em_3d_reconstruction.resolution 3.3 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 5008 _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.pH 8.8 _em_buffer.details ? # loop_ _em_entity_assembly.id _em_entity_assembly.name _em_entity_assembly.type _em_entity_assembly.parent_id _em_entity_assembly.synonym _em_entity_assembly.details _em_entity_assembly.oligomeric_details 1 'Bluetongue Virus 1' VIRUS 0 ? ? ? 2 'VP5 of Bluetongue Virus' ? 1 ? ? ? # _em_image_scans.entry_id 3J9E _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 1630 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 3J9E _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date 2013-11-29 _em_imaging.temperature 82 _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 3300 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.7 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 14000 _em_imaging.calibrated_magnification 24140 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details '400 mesh grid with thin carbon support' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category VERTEBRATES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate SPECIES _em_virus_entity.empty NO _em_virus_entity.enveloped NO _em_virus_entity.details ? # _em_vitrification.entry_id 3J9E _em_vitrification.id 1 _em_vitrification.details 'Plunged into liquid ethane (FEI VITROBOT MARK IV).' _em_vitrification.citation_id ? _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp 90 _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 3J9E _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 3J9E _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry I _em_single_particle_entity.image_processing_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D MET 1 ? A MET 1 2 1 Y 1 D PHE 522 ? A PHE 522 3 1 Y 1 D LEU 523 ? A LEU 523 4 1 Y 1 D ARG 524 ? A ARG 524 5 1 Y 1 D ASN 525 ? A ASN 525 6 1 Y 1 D ALA 526 ? A ALA 526 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.id 1 _em_ctf_correction.details 'each particle' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'GATAN K2 (4k x 4k)' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_software.id 1 _em_software.name FREALIGN _em_software.version ? _em_software.category RECONSTRUCTION _em_software.details ? _em_software.image_processing_id 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 9925 _em_virus_natural_host.organism 'Capra hircus' _em_virus_natural_host.strain ? # _atom_sites.entry_id 3J9E _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_