data_3JR5 # _entry.id 3JR5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JR5 pdb_00003jr5 10.2210/pdb3jr5/pdb NDB NA0141 ? ? RCSB RCSB055054 ? ? WWPDB D_1000055054 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3JR4 _pdbx_database_related.details 'MutM interrogating an extrahelical G, trapped with the same crosslinking pair' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3JR5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Qi, Y.' 1 'Spong, M.C.' 2 'Verdine, G.L.' 3 # _citation.id primary _citation.title 'Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 1468 _citation.page_last 1478 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19889642 _citation.pdbx_database_id_DOI 10.1074/jbc.M109.069799 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qi, Y.' 1 ? primary 'Spong, M.C.' 2 ? primary 'Nam, K.' 3 ? primary 'Karplus, M.' 4 ? primary 'Verdine, G.L.' 5 ? # _cell.length_a 45.343 _cell.length_b 95.377 _cell.length_c 102.482 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3JR5 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3JR5 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA glycosylase' 30596.373 1 4.2.99.18 N174C MutM ? 2 polymer syn ;DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3') ; 4948.217 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(OGX)P*AP*GP*TP*CP*TP*AP*CP*C)-3') ; 4925.274 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 295 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRY AVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKA LLLDQTVVAGFGCIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYV YGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; ;PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRY AVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKA LLLDQTVVAGFGCIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYV YGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; A ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DT)(DC)(DG)(DG)(DA)(DC)(DG)(DC)' AGGTAGACTCGGACGC B ? 3 polydeoxyribonucleotide no yes '(DT)(DG)(DC)(DG)(DT)(DC)(DC)(OGX)(DA)(DG)(DT)(DC)(DT)(DA)(DC)(DC)' TGCGTCCXAGTCTACC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 LEU n 1 4 PRO n 1 5 GLU n 1 6 VAL n 1 7 GLU n 1 8 THR n 1 9 ILE n 1 10 ARG n 1 11 ARG n 1 12 THR n 1 13 LEU n 1 14 LEU n 1 15 PRO n 1 16 LEU n 1 17 ILE n 1 18 VAL n 1 19 GLY n 1 20 LYS n 1 21 THR n 1 22 ILE n 1 23 GLU n 1 24 ASP n 1 25 VAL n 1 26 ARG n 1 27 ILE n 1 28 PHE n 1 29 TRP n 1 30 PRO n 1 31 ASN n 1 32 ILE n 1 33 ILE n 1 34 ARG n 1 35 HIS n 1 36 PRO n 1 37 ARG n 1 38 ASP n 1 39 SER n 1 40 GLU n 1 41 ALA n 1 42 PHE n 1 43 ALA n 1 44 ALA n 1 45 ARG n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLN n 1 50 THR n 1 51 VAL n 1 52 ARG n 1 53 GLY n 1 54 LEU n 1 55 GLU n 1 56 ARG n 1 57 ARG n 1 58 GLY n 1 59 LYS n 1 60 PHE n 1 61 LEU n 1 62 LYS n 1 63 PHE n 1 64 LEU n 1 65 LEU n 1 66 ASP n 1 67 ARG n 1 68 ASP n 1 69 ALA n 1 70 LEU n 1 71 ILE n 1 72 SER n 1 73 HIS n 1 74 LEU n 1 75 ARG n 1 76 MET n 1 77 GLU n 1 78 GLY n 1 79 ARG n 1 80 TYR n 1 81 ALA n 1 82 VAL n 1 83 ALA n 1 84 SER n 1 85 ALA n 1 86 LEU n 1 87 GLU n 1 88 PRO n 1 89 LEU n 1 90 GLU n 1 91 PRO n 1 92 HIS n 1 93 THR n 1 94 HIS n 1 95 VAL n 1 96 VAL n 1 97 PHE n 1 98 CYS n 1 99 PHE n 1 100 THR n 1 101 ASP n 1 102 GLY n 1 103 SER n 1 104 GLU n 1 105 LEU n 1 106 ARG n 1 107 TYR n 1 108 ARG n 1 109 ASP n 1 110 VAL n 1 111 ARG n 1 112 LYS n 1 113 PHE n 1 114 GLY n 1 115 THR n 1 116 MET n 1 117 HIS n 1 118 VAL n 1 119 TYR n 1 120 ALA n 1 121 LYS n 1 122 GLU n 1 123 GLU n 1 124 ALA n 1 125 ASP n 1 126 ARG n 1 127 ARG n 1 128 PRO n 1 129 PRO n 1 130 LEU n 1 131 ALA n 1 132 GLU n 1 133 LEU n 1 134 GLY n 1 135 PRO n 1 136 GLU n 1 137 PRO n 1 138 LEU n 1 139 SER n 1 140 PRO n 1 141 ALA n 1 142 PHE n 1 143 SER n 1 144 PRO n 1 145 ALA n 1 146 VAL n 1 147 LEU n 1 148 ALA n 1 149 GLU n 1 150 ARG n 1 151 ALA n 1 152 VAL n 1 153 LYS n 1 154 THR n 1 155 LYS n 1 156 ARG n 1 157 SER n 1 158 VAL n 1 159 LYS n 1 160 ALA n 1 161 LEU n 1 162 LEU n 1 163 LEU n 1 164 ASP n 1 165 GLN n 1 166 THR n 1 167 VAL n 1 168 VAL n 1 169 ALA n 1 170 GLY n 1 171 PHE n 1 172 GLY n 1 173 CYS n 1 174 ILE n 1 175 TYR n 1 176 VAL n 1 177 ASP n 1 178 GLU n 1 179 SER n 1 180 LEU n 1 181 PHE n 1 182 ARG n 1 183 ALA n 1 184 GLY n 1 185 ILE n 1 186 LEU n 1 187 PRO n 1 188 GLY n 1 189 ARG n 1 190 PRO n 1 191 ALA n 1 192 ALA n 1 193 SER n 1 194 LEU n 1 195 SER n 1 196 SER n 1 197 LYS n 1 198 GLU n 1 199 ILE n 1 200 GLU n 1 201 ARG n 1 202 LEU n 1 203 HIS n 1 204 GLU n 1 205 GLU n 1 206 MET n 1 207 VAL n 1 208 ALA n 1 209 THR n 1 210 ILE n 1 211 GLY n 1 212 GLU n 1 213 ALA n 1 214 VAL n 1 215 MET n 1 216 LYS n 1 217 GLY n 1 218 GLY n 1 219 SER n 1 220 THR n 1 221 VAL n 1 222 ARG n 1 223 THR n 1 224 TYR n 1 225 VAL n 1 226 ASN n 1 227 THR n 1 228 GLN n 1 229 GLY n 1 230 GLU n 1 231 ALA n 1 232 GLY n 1 233 THR n 1 234 PHE n 1 235 GLN n 1 236 HIS n 1 237 HIS n 1 238 LEU n 1 239 TYR n 1 240 VAL n 1 241 TYR n 1 242 GLY n 1 243 ARG n 1 244 GLN n 1 245 GLY n 1 246 ASN n 1 247 PRO n 1 248 CYS n 1 249 LYS n 1 250 ARG n 1 251 CYS n 1 252 GLY n 1 253 THR n 1 254 PRO n 1 255 ILE n 1 256 GLU n 1 257 LYS n 1 258 THR n 1 259 VAL n 1 260 VAL n 1 261 ALA n 1 262 GLY n 1 263 ARG n 1 264 GLY n 1 265 THR n 1 266 HIS n 1 267 TYR n 1 268 CYS n 1 269 PRO n 1 270 ARG n 1 271 CYS n 1 272 GLN n 1 273 ARG n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DT n 2 5 DA n 2 6 DG n 2 7 DA n 2 8 DC n 2 9 DT n 2 10 DC n 2 11 DG n 2 12 DG n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DC n 3 1 DT n 3 2 DG n 3 3 DC n 3 4 DG n 3 5 DT n 3 6 DC n 3 7 DC n 3 8 OGX n 3 9 DA n 3 10 DG n 3 11 DT n 3 12 DC n 3 13 DT n 3 14 DA n 3 15 DC n 3 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Geobacillus stearothermophilus' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) PlysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP P84131_BACST P84131 1 ;PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRY AVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKA LLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYV YGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; 2 ? 2 PDB 3JR5 3JR5 2 ? ? ? 3 PDB 3JR5 3JR5 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3JR5 A 1 ? 273 ? P84131 2 ? 274 ? 2 274 2 2 3JR5 B 1 ? 16 ? 3JR5 1 ? 16 ? 1 16 3 3 3JR5 C 1 ? 16 ? 3JR5 1 ? 16 ? 1 16 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3JR5 _struct_ref_seq_dif.mon_id CYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 173 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P84131 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 174 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 174 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OGX 'DNA linking' n "2'-deoxy-5'-O-{(S)-hydroxy[(2-sulfanylethyl)amino]phosphoryl}-8-oxoguanosine" ? 'C12 H19 N6 O7 P S' 422.354 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 3JR5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details 'PEG 8K, sodium cacodylate, glycerol, pH 7.0, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 8K' ? ? ? 1 2 1 'sodium cacodylate' ? ? ? 1 3 1 glycerol ? ? ? 1 4 2 'PEG 8K' ? ? ? 1 5 2 'sodium cacodylate' ? ? ? 1 6 2 glycerol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 2008-02-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.290 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 1.290 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 3JR5 _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 50.000 _reflns.number_obs 48192 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_netI_over_sigmaI 12.700 _reflns.pdbx_chi_squared 1.031 _reflns.pdbx_redundancy 5.300 _reflns.percent_possible_obs 98.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.76 ? ? ? 0.492 ? ? 1.009 5.00 ? 4617 95.80 1 1 1.76 1.83 ? ? ? 0.364 ? ? 1.041 5.30 ? 4688 97.30 2 1 1.83 1.91 ? ? ? 0.259 ? ? 1.045 5.30 ? 4697 97.50 3 1 1.91 2.02 ? ? ? 0.188 ? ? 1.073 5.30 ? 4735 98.00 4 1 2.02 2.14 ? ? ? 0.134 ? ? 1.018 5.30 ? 4776 97.90 5 1 2.14 2.31 ? ? ? 0.104 ? ? 1.033 5.40 ? 4788 98.80 6 1 2.31 2.54 ? ? ? 0.083 ? ? 1.031 5.40 ? 4850 99.20 7 1 2.54 2.91 ? ? ? 0.070 ? ? 0.971 5.50 ? 4894 99.70 8 1 2.91 3.66 ? ? ? 0.061 ? ? 1.057 5.40 ? 4971 99.90 9 1 3.66 50.00 ? ? ? 0.053 ? ? 1.036 5.30 ? 5176 99.60 10 1 # _refine.entry_id 3JR5 _refine.ls_d_res_high 1.704 _refine.ls_d_res_low 38.027 _refine.pdbx_ls_sigma_F 1.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 93.210 _refine.ls_number_reflns_obs 46049 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.166 _refine.ls_R_factor_R_work 0.165 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.185 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.010 _refine.ls_number_reflns_R_free 2306 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.972 _refine.solvent_model_param_bsol 49.963 _refine.solvent_model_param_ksol 0.368 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.151 _refine.aniso_B[2][2] 1.906 _refine.aniso_B[3][3] -4.057 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.200 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 1R2Y' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 130.31 _refine.B_iso_min 8.67 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2135 _refine_hist.pdbx_number_atoms_nucleic_acid 596 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 295 _refine_hist.number_atoms_total 3033 _refine_hist.d_res_high 1.704 _refine_hist.d_res_low 38.027 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2855 0.007 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3983 1.175 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 442 0.075 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 415 0.005 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1106 19.179 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.704 1.741 16 58.000 1685 . 0.182 0.204 . 75 . 1760 . . 'X-RAY DIFFRACTION' 1.741 1.781 16 84.000 2413 . 0.172 0.178 . 132 . 2545 . . 'X-RAY DIFFRACTION' 1.781 1.826 16 87.000 2544 . 0.163 0.203 . 125 . 2669 . . 'X-RAY DIFFRACTION' 1.826 1.875 16 90.000 2631 . 0.162 0.195 . 131 . 2762 . . 'X-RAY DIFFRACTION' 1.875 1.931 16 93.000 2663 . 0.156 0.197 . 150 . 2813 . . 'X-RAY DIFFRACTION' 1.931 1.993 16 94.000 2752 . 0.147 0.198 . 137 . 2889 . . 'X-RAY DIFFRACTION' 1.993 2.064 16 95.000 2777 . 0.148 0.168 . 146 . 2923 . . 'X-RAY DIFFRACTION' 2.064 2.147 16 97.000 2832 . 0.147 0.149 . 141 . 2973 . . 'X-RAY DIFFRACTION' 2.147 2.244 16 97.000 2835 . 0.153 0.169 . 148 . 2983 . . 'X-RAY DIFFRACTION' 2.244 2.363 16 98.000 2851 . 0.157 0.173 . 147 . 2998 . . 'X-RAY DIFFRACTION' 2.363 2.511 16 99.000 2890 . 0.163 0.214 . 167 . 3057 . . 'X-RAY DIFFRACTION' 2.511 2.704 16 98.000 2850 . 0.170 0.189 . 172 . 3022 . . 'X-RAY DIFFRACTION' 2.704 2.977 16 99.000 2928 . 0.174 0.196 . 161 . 3089 . . 'X-RAY DIFFRACTION' 2.977 3.407 16 100.000 2969 . 0.167 0.173 . 153 . 3122 . . 'X-RAY DIFFRACTION' 3.407 4.291 16 100.000 2965 . 0.149 0.165 . 176 . 3141 . . 'X-RAY DIFFRACTION' 4.291 38.037 16 99.000 3158 . 0.168 0.174 . 145 . 3303 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3JR5 _struct.title 'MutM lesion recognition control complex with N174C crosslinking site' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JR5 _struct_keywords.text ;DNA glycosylase, DNA repair, damage search, base extrusion, disulfide crosslinking, DNA damage, DNA-binding, Glycosidase, Hydrolase, Lyase, Metal-binding, Multifunctional enzyme, Zinc-finger, Lyase-DNA COMPLEX ; _struct_keywords.pdbx_keywords Lyase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 2 ? VAL A 18 ? GLN A 3 VAL A 19 1 ? 17 HELX_P HELX_P2 2 TRP A 29 ? ASN A 31 ? TRP A 30 ASN A 32 5 ? 3 HELX_P HELX_P3 3 ASP A 38 ? ILE A 47 ? ASP A 39 ILE A 48 1 ? 10 HELX_P HELX_P4 4 LYS A 121 ? ASP A 125 ? LYS A 122 ASP A 126 1 ? 5 HELX_P HELX_P5 5 SER A 143 ? VAL A 152 ? SER A 144 VAL A 153 1 ? 10 HELX_P HELX_P6 6 SER A 157 ? ASP A 164 ? SER A 158 ASP A 165 1 ? 8 HELX_P HELX_P7 7 GLY A 172 ? GLY A 184 ? GLY A 173 GLY A 185 1 ? 13 HELX_P HELX_P8 8 PRO A 190 ? LEU A 194 ? PRO A 191 LEU A 195 5 ? 5 HELX_P HELX_P9 9 SER A 195 ? LYS A 216 ? SER A 196 LYS A 217 1 ? 22 HELX_P HELX_P10 10 THR A 233 ? LEU A 238 ? THR A 234 LEU A 239 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 173 SG ? ? ? 1_555 C OGX 8 S ? ? A CYS 174 C OGX 8 1_555 ? ? ? ? ? ? ? 2.027 ? ? covale2 covale both ? C DC 7 "O3'" ? ? ? 1_555 C OGX 8 P ? ? C DC 7 C OGX 8 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale3 covale both ? C OGX 8 "O3'" ? ? ? 1_555 C DA 9 P ? ? C OGX 8 C DA 9 1_555 ? ? ? ? ? ? ? 1.599 ? ? metalc1 metalc ? ? A CYS 248 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 249 A ZN 300 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc2 metalc ? ? A CYS 251 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 252 A ZN 300 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc3 metalc ? ? A CYS 268 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 269 A ZN 300 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc4 metalc ? ? A CYS 271 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 272 A ZN 300 1_555 ? ? ? ? ? ? ? 2.315 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 16 N3 ? ? B DG 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 16 O2 ? ? B DG 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 16 N4 ? ? B DG 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 15 N3 ? ? B DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 15 O2 ? ? B DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 15 N4 ? ? B DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 14 N1 ? ? B DT 4 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 14 N6 ? ? B DT 4 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 13 N3 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 13 O4 ? ? B DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 12 N3 ? ? B DG 6 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 12 O2 ? ? B DG 6 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 12 N4 ? ? B DG 6 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 8 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 8 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 8 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 9 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 11 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 11 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 11 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 5 N3 ? ? B DA 13 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 5 O4 ? ? B DA 13 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 14 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 15 C DC 3 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 35 A . ? HIS 36 A PRO 36 A ? PRO 37 A 1 -10.10 2 PRO 128 A . ? PRO 129 A PRO 129 A ? PRO 130 A 1 4.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 22 ? ILE A 27 ? ILE A 23 ILE A 28 A 2 THR A 93 ? PHE A 99 ? THR A 94 PHE A 100 A 3 SER A 103 ? ARG A 108 ? SER A 104 ARG A 109 A 4 ARG A 79 ? SER A 84 ? ARG A 80 SER A 85 B 1 ILE A 33 ? HIS A 35 ? ILE A 34 HIS A 36 B 2 THR A 115 ? ALA A 120 ? THR A 116 ALA A 121 B 3 ASP A 68 ? HIS A 73 ? ASP A 69 HIS A 74 B 4 PHE A 60 ? LEU A 64 ? PHE A 61 LEU A 65 B 5 GLY A 53 ? ARG A 57 ? GLY A 54 ARG A 58 C 1 GLU A 256 ? VAL A 260 ? GLU A 257 VAL A 261 C 2 ARG A 263 ? TYR A 267 ? ARG A 264 TYR A 268 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 23 ? N GLU A 24 O CYS A 98 ? O CYS A 99 A 2 3 N VAL A 95 ? N VAL A 96 O TYR A 107 ? O TYR A 108 A 3 4 O ARG A 106 ? O ARG A 107 N ALA A 81 ? N ALA A 82 B 1 2 N ARG A 34 ? N ARG A 35 O MET A 116 ? O MET A 117 B 2 3 O HIS A 117 ? O HIS A 118 N ILE A 71 ? N ILE A 72 B 3 4 O LEU A 70 ? O LEU A 71 N PHE A 63 ? N PHE A 64 B 4 5 O LYS A 62 ? O LYS A 63 N GLU A 55 ? N GLU A 56 C 1 2 N GLU A 256 ? N GLU A 257 O TYR A 267 ? O TYR A 268 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 300 ? 4 'BINDING SITE FOR RESIDUE ZN A 300' AC2 Software A GOL 1 ? 8 'BINDING SITE FOR RESIDUE GOL A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 248 ? CYS A 249 . ? 1_555 ? 2 AC1 4 CYS A 251 ? CYS A 252 . ? 1_555 ? 3 AC1 4 CYS A 268 ? CYS A 269 . ? 1_555 ? 4 AC1 4 CYS A 271 ? CYS A 272 . ? 1_555 ? 5 AC2 8 HIS A 73 ? HIS A 74 . ? 1_555 ? 6 AC2 8 ARG A 75 ? ARG A 76 . ? 1_555 ? 7 AC2 8 THR A 115 ? THR A 116 . ? 1_555 ? 8 AC2 8 HIS A 117 ? HIS A 118 . ? 1_555 ? 9 AC2 8 PRO A 129 ? PRO A 130 . ? 1_555 ? 10 AC2 8 HOH F . ? HOH A 288 . ? 1_555 ? 11 AC2 8 HOH F . ? HOH A 435 . ? 1_555 ? 12 AC2 8 DT C 11 ? DT C 11 . ? 1_555 ? # _atom_sites.entry_id 3JR5 _atom_sites.fract_transf_matrix[1][1] 0.022054 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010485 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009758 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 2 PRO PRO A . n A 1 2 GLN 2 3 3 GLN GLN A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 PRO 4 5 5 PRO PRO A . n A 1 5 GLU 5 6 6 GLU GLU A . n A 1 6 VAL 6 7 7 VAL VAL A . n A 1 7 GLU 7 8 8 GLU GLU A . n A 1 8 THR 8 9 9 THR THR A . n A 1 9 ILE 9 10 10 ILE ILE A . n A 1 10 ARG 10 11 11 ARG ARG A . n A 1 11 ARG 11 12 12 ARG ARG A . n A 1 12 THR 12 13 13 THR THR A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 LEU 14 15 15 LEU LEU A . n A 1 15 PRO 15 16 16 PRO PRO A . n A 1 16 LEU 16 17 17 LEU LEU A . n A 1 17 ILE 17 18 18 ILE ILE A . n A 1 18 VAL 18 19 19 VAL VAL A . n A 1 19 GLY 19 20 20 GLY GLY A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 THR 21 22 22 THR THR A . n A 1 22 ILE 22 23 23 ILE ILE A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ASP 24 25 25 ASP ASP A . n A 1 25 VAL 25 26 26 VAL VAL A . n A 1 26 ARG 26 27 27 ARG ARG A . n A 1 27 ILE 27 28 28 ILE ILE A . n A 1 28 PHE 28 29 29 PHE PHE A . n A 1 29 TRP 29 30 30 TRP TRP A . n A 1 30 PRO 30 31 31 PRO PRO A . n A 1 31 ASN 31 32 32 ASN ASN A . n A 1 32 ILE 32 33 33 ILE ILE A . n A 1 33 ILE 33 34 34 ILE ILE A . n A 1 34 ARG 34 35 35 ARG ARG A . n A 1 35 HIS 35 36 36 HIS HIS A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 ARG 37 38 38 ARG ARG A . n A 1 38 ASP 38 39 39 ASP ASP A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 GLU 40 41 41 GLU GLU A . n A 1 41 ALA 41 42 42 ALA ALA A . n A 1 42 PHE 42 43 43 PHE PHE A . n A 1 43 ALA 43 44 44 ALA ALA A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 MET 46 47 47 MET MET A . n A 1 47 ILE 47 48 48 ILE ILE A . n A 1 48 GLY 48 49 49 GLY GLY A . n A 1 49 GLN 49 50 50 GLN GLN A . n A 1 50 THR 50 51 51 THR THR A . n A 1 51 VAL 51 52 52 VAL VAL A . n A 1 52 ARG 52 53 53 ARG ARG A . n A 1 53 GLY 53 54 54 GLY GLY A . n A 1 54 LEU 54 55 55 LEU LEU A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 ARG 56 57 57 ARG ARG A . n A 1 57 ARG 57 58 58 ARG ARG A . n A 1 58 GLY 58 59 59 GLY GLY A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 PHE 60 61 61 PHE PHE A . n A 1 61 LEU 61 62 62 LEU LEU A . n A 1 62 LYS 62 63 63 LYS LYS A . n A 1 63 PHE 63 64 64 PHE PHE A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 ARG 67 68 68 ARG ARG A . n A 1 68 ASP 68 69 69 ASP ASP A . n A 1 69 ALA 69 70 70 ALA ALA A . n A 1 70 LEU 70 71 71 LEU LEU A . n A 1 71 ILE 71 72 72 ILE ILE A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 HIS 73 74 74 HIS HIS A . n A 1 74 LEU 74 75 75 LEU LEU A . n A 1 75 ARG 75 76 76 ARG ARG A . n A 1 76 MET 76 77 77 MET MET A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 GLY 78 79 79 GLY GLY A . n A 1 79 ARG 79 80 80 ARG ARG A . n A 1 80 TYR 80 81 81 TYR TYR A . n A 1 81 ALA 81 82 82 ALA ALA A . n A 1 82 VAL 82 83 83 VAL VAL A . n A 1 83 ALA 83 84 84 ALA ALA A . n A 1 84 SER 84 85 85 SER SER A . n A 1 85 ALA 85 86 86 ALA ALA A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 GLU 87 88 88 GLU GLU A . n A 1 88 PRO 88 89 89 PRO PRO A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 GLU 90 91 91 GLU GLU A . n A 1 91 PRO 91 92 92 PRO PRO A . n A 1 92 HIS 92 93 93 HIS HIS A . n A 1 93 THR 93 94 94 THR THR A . n A 1 94 HIS 94 95 95 HIS HIS A . n A 1 95 VAL 95 96 96 VAL VAL A . n A 1 96 VAL 96 97 97 VAL VAL A . n A 1 97 PHE 97 98 98 PHE PHE A . n A 1 98 CYS 98 99 99 CYS CYS A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 ASP 101 102 102 ASP ASP A . n A 1 102 GLY 102 103 103 GLY GLY A . n A 1 103 SER 103 104 104 SER SER A . n A 1 104 GLU 104 105 105 GLU GLU A . n A 1 105 LEU 105 106 106 LEU LEU A . n A 1 106 ARG 106 107 107 ARG ARG A . n A 1 107 TYR 107 108 108 TYR TYR A . n A 1 108 ARG 108 109 109 ARG ARG A . n A 1 109 ASP 109 110 110 ASP ASP A . n A 1 110 VAL 110 111 111 VAL VAL A . n A 1 111 ARG 111 112 112 ARG ARG A . n A 1 112 LYS 112 113 113 LYS LYS A . n A 1 113 PHE 113 114 114 PHE PHE A . n A 1 114 GLY 114 115 115 GLY GLY A . n A 1 115 THR 115 116 116 THR THR A . n A 1 116 MET 116 117 117 MET MET A . n A 1 117 HIS 117 118 118 HIS HIS A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 TYR 119 120 120 TYR TYR A . n A 1 120 ALA 120 121 121 ALA ALA A . n A 1 121 LYS 121 122 122 LYS LYS A . n A 1 122 GLU 122 123 123 GLU GLU A . n A 1 123 GLU 123 124 124 GLU GLU A . n A 1 124 ALA 124 125 125 ALA ALA A . n A 1 125 ASP 125 126 126 ASP ASP A . n A 1 126 ARG 126 127 127 ARG ARG A . n A 1 127 ARG 127 128 128 ARG ARG A . n A 1 128 PRO 128 129 129 PRO PRO A . n A 1 129 PRO 129 130 130 PRO PRO A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 ALA 131 132 132 ALA ALA A . n A 1 132 GLU 132 133 133 GLU GLU A . n A 1 133 LEU 133 134 134 LEU LEU A . n A 1 134 GLY 134 135 135 GLY GLY A . n A 1 135 PRO 135 136 136 PRO PRO A . n A 1 136 GLU 136 137 137 GLU GLU A . n A 1 137 PRO 137 138 138 PRO PRO A . n A 1 138 LEU 138 139 139 LEU LEU A . n A 1 139 SER 139 140 140 SER SER A . n A 1 140 PRO 140 141 141 PRO PRO A . n A 1 141 ALA 141 142 142 ALA ALA A . n A 1 142 PHE 142 143 143 PHE PHE A . n A 1 143 SER 143 144 144 SER SER A . n A 1 144 PRO 144 145 145 PRO PRO A . n A 1 145 ALA 145 146 146 ALA ALA A . n A 1 146 VAL 146 147 147 VAL VAL A . n A 1 147 LEU 147 148 148 LEU LEU A . n A 1 148 ALA 148 149 149 ALA ALA A . n A 1 149 GLU 149 150 150 GLU GLU A . n A 1 150 ARG 150 151 151 ARG ARG A . n A 1 151 ALA 151 152 152 ALA ALA A . n A 1 152 VAL 152 153 153 VAL VAL A . n A 1 153 LYS 153 154 154 LYS LYS A . n A 1 154 THR 154 155 155 THR THR A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 ARG 156 157 157 ARG ARG A . n A 1 157 SER 157 158 158 SER SER A . n A 1 158 VAL 158 159 159 VAL VAL A . n A 1 159 LYS 159 160 160 LYS LYS A . n A 1 160 ALA 160 161 161 ALA ALA A . n A 1 161 LEU 161 162 162 LEU LEU A . n A 1 162 LEU 162 163 163 LEU LEU A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 ASP 164 165 165 ASP ASP A . n A 1 165 GLN 165 166 166 GLN GLN A . n A 1 166 THR 166 167 167 THR THR A . n A 1 167 VAL 167 168 168 VAL VAL A . n A 1 168 VAL 168 169 169 VAL VAL A . n A 1 169 ALA 169 170 170 ALA ALA A . n A 1 170 GLY 170 171 171 GLY GLY A . n A 1 171 PHE 171 172 172 PHE PHE A . n A 1 172 GLY 172 173 173 GLY GLY A . n A 1 173 CYS 173 174 174 CYS CYS A . n A 1 174 ILE 174 175 175 ILE ILE A . n A 1 175 TYR 175 176 176 TYR TYR A . n A 1 176 VAL 176 177 177 VAL VAL A . n A 1 177 ASP 177 178 178 ASP ASP A . n A 1 178 GLU 178 179 179 GLU GLU A . n A 1 179 SER 179 180 180 SER SER A . n A 1 180 LEU 180 181 181 LEU LEU A . n A 1 181 PHE 181 182 182 PHE PHE A . n A 1 182 ARG 182 183 183 ARG ARG A . n A 1 183 ALA 183 184 184 ALA ALA A . n A 1 184 GLY 184 185 185 GLY GLY A . n A 1 185 ILE 185 186 186 ILE ILE A . n A 1 186 LEU 186 187 187 LEU LEU A . n A 1 187 PRO 187 188 188 PRO PRO A . n A 1 188 GLY 188 189 189 GLY GLY A . n A 1 189 ARG 189 190 190 ARG ARG A . n A 1 190 PRO 190 191 191 PRO PRO A . n A 1 191 ALA 191 192 192 ALA ALA A . n A 1 192 ALA 192 193 193 ALA ALA A . n A 1 193 SER 193 194 194 SER SER A . n A 1 194 LEU 194 195 195 LEU LEU A . n A 1 195 SER 195 196 196 SER SER A . n A 1 196 SER 196 197 197 SER SER A . n A 1 197 LYS 197 198 198 LYS LYS A . n A 1 198 GLU 198 199 199 GLU GLU A . n A 1 199 ILE 199 200 200 ILE ILE A . n A 1 200 GLU 200 201 201 GLU GLU A . n A 1 201 ARG 201 202 202 ARG ARG A . n A 1 202 LEU 202 203 203 LEU LEU A . n A 1 203 HIS 203 204 204 HIS HIS A . n A 1 204 GLU 204 205 205 GLU GLU A . n A 1 205 GLU 205 206 206 GLU GLU A . n A 1 206 MET 206 207 207 MET MET A . n A 1 207 VAL 207 208 208 VAL VAL A . n A 1 208 ALA 208 209 209 ALA ALA A . n A 1 209 THR 209 210 210 THR THR A . n A 1 210 ILE 210 211 211 ILE ILE A . n A 1 211 GLY 211 212 212 GLY GLY A . n A 1 212 GLU 212 213 213 GLU GLU A . n A 1 213 ALA 213 214 214 ALA ALA A . n A 1 214 VAL 214 215 215 VAL VAL A . n A 1 215 MET 215 216 216 MET MET A . n A 1 216 LYS 216 217 217 LYS LYS A . n A 1 217 GLY 217 218 218 GLY GLY A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 SER 219 220 220 SER SER A . n A 1 220 THR 220 221 221 THR THR A . n A 1 221 VAL 221 222 222 VAL VAL A . n A 1 222 ARG 222 223 223 ARG ARG A . n A 1 223 THR 223 224 224 THR THR A . n A 1 224 TYR 224 225 225 TYR TYR A . n A 1 225 VAL 225 226 226 VAL VAL A . n A 1 226 ASN 226 227 227 ASN ASN A . n A 1 227 THR 227 228 228 THR THR A . n A 1 228 GLN 228 229 229 GLN GLN A . n A 1 229 GLY 229 230 230 GLY GLY A . n A 1 230 GLU 230 231 231 GLU GLU A . n A 1 231 ALA 231 232 232 ALA ALA A . n A 1 232 GLY 232 233 233 GLY GLY A . n A 1 233 THR 233 234 234 THR THR A . n A 1 234 PHE 234 235 235 PHE PHE A . n A 1 235 GLN 235 236 236 GLN GLN A . n A 1 236 HIS 236 237 237 HIS HIS A . n A 1 237 HIS 237 238 238 HIS HIS A . n A 1 238 LEU 238 239 239 LEU LEU A . n A 1 239 TYR 239 240 240 TYR TYR A . n A 1 240 VAL 240 241 241 VAL VAL A . n A 1 241 TYR 241 242 242 TYR TYR A . n A 1 242 GLY 242 243 243 GLY GLY A . n A 1 243 ARG 243 244 244 ARG ARG A . n A 1 244 GLN 244 245 245 GLN GLN A . n A 1 245 GLY 245 246 246 GLY GLY A . n A 1 246 ASN 246 247 247 ASN ASN A . n A 1 247 PRO 247 248 248 PRO PRO A . n A 1 248 CYS 248 249 249 CYS CYS A . n A 1 249 LYS 249 250 250 LYS LYS A . n A 1 250 ARG 250 251 251 ARG ARG A . n A 1 251 CYS 251 252 252 CYS CYS A . n A 1 252 GLY 252 253 253 GLY GLY A . n A 1 253 THR 253 254 254 THR THR A . n A 1 254 PRO 254 255 255 PRO PRO A . n A 1 255 ILE 255 256 256 ILE ILE A . n A 1 256 GLU 256 257 257 GLU GLU A . n A 1 257 LYS 257 258 258 LYS LYS A . n A 1 258 THR 258 259 259 THR THR A . n A 1 259 VAL 259 260 260 VAL VAL A . n A 1 260 VAL 260 261 261 VAL VAL A . n A 1 261 ALA 261 262 262 ALA ALA A . n A 1 262 GLY 262 263 263 GLY GLY A . n A 1 263 ARG 263 264 264 ARG ARG A . n A 1 264 GLY 264 265 265 GLY GLY A . n A 1 265 THR 265 266 266 THR THR A . n A 1 266 HIS 266 267 267 HIS HIS A . n A 1 267 TYR 267 268 268 TYR TYR A . n A 1 268 CYS 268 269 269 CYS CYS A . n A 1 269 PRO 269 270 270 PRO PRO A . n A 1 270 ARG 270 271 271 ARG ARG A . n A 1 271 CYS 271 272 272 CYS CYS A . n A 1 272 GLN 272 273 273 GLN GLN A . n A 1 273 ARG 273 274 274 ARG ARG A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DA 7 7 7 DA DA B . n B 2 8 DC 8 8 8 DC DC B . n B 2 9 DT 9 9 9 DT DT B . n B 2 10 DC 10 10 10 DC DC B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DG 12 12 12 DG DG B . n B 2 13 DA 13 13 13 DA DA B . n B 2 14 DC 14 14 14 DC DC B . n B 2 15 DG 15 15 15 DG DG B . n B 2 16 DC 16 16 ? ? ? B . n C 3 1 DT 1 1 ? ? ? C . n C 3 2 DG 2 2 ? ? ? C . n C 3 3 DC 3 3 3 DC DC C . n C 3 4 DG 4 4 4 DG DG C . n C 3 5 DT 5 5 5 DT DT C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DC 7 7 7 DC DC C . n C 3 8 OGX 8 8 8 OGX OGX C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DT 11 11 11 DT DT C . n C 3 12 DC 12 12 12 DC DC C . n C 3 13 DT 13 13 13 DT DT C . n C 3 14 DA 14 14 14 DA DA C . n C 3 15 DC 15 15 15 DC DC C . n C 3 16 DC 16 16 16 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 300 300 ZN ZN A . E 5 GOL 1 1 1 GOL GOL A . F 6 HOH 1 275 275 HOH HOH A . F 6 HOH 2 276 1 HOH HOH A . F 6 HOH 3 277 277 HOH HOH A . F 6 HOH 4 278 278 HOH HOH A . F 6 HOH 5 279 279 HOH HOH A . F 6 HOH 6 280 280 HOH HOH A . F 6 HOH 7 281 281 HOH HOH A . F 6 HOH 8 282 282 HOH HOH A . F 6 HOH 9 283 283 HOH HOH A . F 6 HOH 10 284 284 HOH HOH A . F 6 HOH 11 285 285 HOH HOH A . F 6 HOH 12 286 2 HOH HOH A . F 6 HOH 13 287 287 HOH HOH A . F 6 HOH 14 288 288 HOH HOH A . F 6 HOH 15 289 289 HOH HOH A . F 6 HOH 16 290 290 HOH HOH A . F 6 HOH 17 291 291 HOH HOH A . F 6 HOH 18 292 292 HOH HOH A . F 6 HOH 19 293 3 HOH HOH A . F 6 HOH 20 294 294 HOH HOH A . F 6 HOH 21 295 295 HOH HOH A . F 6 HOH 22 296 4 HOH HOH A . F 6 HOH 23 297 5 HOH HOH A . F 6 HOH 24 298 6 HOH HOH A . F 6 HOH 25 299 7 HOH HOH A . F 6 HOH 26 301 8 HOH HOH A . F 6 HOH 27 302 9 HOH HOH A . F 6 HOH 28 303 10 HOH HOH A . F 6 HOH 29 304 11 HOH HOH A . F 6 HOH 30 305 12 HOH HOH A . F 6 HOH 31 306 13 HOH HOH A . F 6 HOH 32 307 14 HOH HOH A . F 6 HOH 33 308 15 HOH HOH A . F 6 HOH 34 309 16 HOH HOH A . F 6 HOH 35 310 17 HOH HOH A . F 6 HOH 36 311 18 HOH HOH A . F 6 HOH 37 312 19 HOH HOH A . F 6 HOH 38 313 20 HOH HOH A . F 6 HOH 39 314 21 HOH HOH A . F 6 HOH 40 315 22 HOH HOH A . F 6 HOH 41 316 23 HOH HOH A . F 6 HOH 42 317 24 HOH HOH A . F 6 HOH 43 318 25 HOH HOH A . F 6 HOH 44 319 26 HOH HOH A . F 6 HOH 45 320 27 HOH HOH A . F 6 HOH 46 321 28 HOH HOH A . F 6 HOH 47 322 29 HOH HOH A . F 6 HOH 48 323 30 HOH HOH A . F 6 HOH 49 324 31 HOH HOH A . F 6 HOH 50 325 32 HOH HOH A . F 6 HOH 51 326 33 HOH HOH A . F 6 HOH 52 327 34 HOH HOH A . F 6 HOH 53 328 35 HOH HOH A . F 6 HOH 54 329 36 HOH HOH A . F 6 HOH 55 330 37 HOH HOH A . F 6 HOH 56 331 38 HOH HOH A . F 6 HOH 57 332 39 HOH HOH A . F 6 HOH 58 333 40 HOH HOH A . F 6 HOH 59 334 42 HOH HOH A . F 6 HOH 60 335 43 HOH HOH A . F 6 HOH 61 336 44 HOH HOH A . F 6 HOH 62 337 45 HOH HOH A . F 6 HOH 63 338 47 HOH HOH A . F 6 HOH 64 339 48 HOH HOH A . F 6 HOH 65 340 49 HOH HOH A . F 6 HOH 66 341 50 HOH HOH A . F 6 HOH 67 342 51 HOH HOH A . F 6 HOH 68 343 52 HOH HOH A . F 6 HOH 69 344 53 HOH HOH A . F 6 HOH 70 345 54 HOH HOH A . F 6 HOH 71 346 55 HOH HOH A . F 6 HOH 72 347 56 HOH HOH A . F 6 HOH 73 348 57 HOH HOH A . F 6 HOH 74 349 58 HOH HOH A . F 6 HOH 75 350 60 HOH HOH A . F 6 HOH 76 351 61 HOH HOH A . F 6 HOH 77 352 62 HOH HOH A . F 6 HOH 78 353 63 HOH HOH A . F 6 HOH 79 354 65 HOH HOH A . F 6 HOH 80 355 66 HOH HOH A . F 6 HOH 81 356 68 HOH HOH A . F 6 HOH 82 357 70 HOH HOH A . F 6 HOH 83 358 71 HOH HOH A . F 6 HOH 84 359 72 HOH HOH A . F 6 HOH 85 360 73 HOH HOH A . F 6 HOH 86 361 74 HOH HOH A . F 6 HOH 87 362 75 HOH HOH A . F 6 HOH 88 363 76 HOH HOH A . F 6 HOH 89 364 77 HOH HOH A . F 6 HOH 90 365 78 HOH HOH A . F 6 HOH 91 366 79 HOH HOH A . F 6 HOH 92 367 80 HOH HOH A . F 6 HOH 93 368 81 HOH HOH A . F 6 HOH 94 369 84 HOH HOH A . F 6 HOH 95 370 85 HOH HOH A . F 6 HOH 96 371 86 HOH HOH A . F 6 HOH 97 372 87 HOH HOH A . F 6 HOH 98 373 88 HOH HOH A . F 6 HOH 99 374 89 HOH HOH A . F 6 HOH 100 375 90 HOH HOH A . F 6 HOH 101 376 91 HOH HOH A . F 6 HOH 102 377 93 HOH HOH A . F 6 HOH 103 378 94 HOH HOH A . F 6 HOH 104 379 97 HOH HOH A . F 6 HOH 105 380 99 HOH HOH A . F 6 HOH 106 381 100 HOH HOH A . F 6 HOH 107 382 101 HOH HOH A . F 6 HOH 108 383 102 HOH HOH A . F 6 HOH 109 384 103 HOH HOH A . F 6 HOH 110 385 104 HOH HOH A . F 6 HOH 111 386 105 HOH HOH A . F 6 HOH 112 387 106 HOH HOH A . F 6 HOH 113 388 107 HOH HOH A . F 6 HOH 114 389 108 HOH HOH A . F 6 HOH 115 390 109 HOH HOH A . F 6 HOH 116 391 110 HOH HOH A . F 6 HOH 117 392 111 HOH HOH A . F 6 HOH 118 393 112 HOH HOH A . F 6 HOH 119 394 113 HOH HOH A . F 6 HOH 120 395 114 HOH HOH A . F 6 HOH 121 396 115 HOH HOH A . F 6 HOH 122 397 116 HOH HOH A . F 6 HOH 123 398 118 HOH HOH A . F 6 HOH 124 399 120 HOH HOH A . F 6 HOH 125 400 121 HOH HOH A . F 6 HOH 126 401 122 HOH HOH A . F 6 HOH 127 402 123 HOH HOH A . F 6 HOH 128 403 125 HOH HOH A . F 6 HOH 129 404 126 HOH HOH A . F 6 HOH 130 405 129 HOH HOH A . F 6 HOH 131 406 130 HOH HOH A . F 6 HOH 132 407 131 HOH HOH A . F 6 HOH 133 408 132 HOH HOH A . F 6 HOH 134 409 133 HOH HOH A . F 6 HOH 135 410 135 HOH HOH A . F 6 HOH 136 411 136 HOH HOH A . F 6 HOH 137 412 138 HOH HOH A . F 6 HOH 138 413 139 HOH HOH A . F 6 HOH 139 414 140 HOH HOH A . F 6 HOH 140 415 141 HOH HOH A . F 6 HOH 141 416 142 HOH HOH A . F 6 HOH 142 417 143 HOH HOH A . F 6 HOH 143 418 144 HOH HOH A . F 6 HOH 144 419 145 HOH HOH A . F 6 HOH 145 420 147 HOH HOH A . F 6 HOH 146 421 148 HOH HOH A . F 6 HOH 147 422 149 HOH HOH A . F 6 HOH 148 423 150 HOH HOH A . F 6 HOH 149 424 151 HOH HOH A . F 6 HOH 150 425 152 HOH HOH A . F 6 HOH 151 426 153 HOH HOH A . F 6 HOH 152 427 154 HOH HOH A . F 6 HOH 153 428 155 HOH HOH A . F 6 HOH 154 429 156 HOH HOH A . F 6 HOH 155 430 157 HOH HOH A . F 6 HOH 156 431 159 HOH HOH A . F 6 HOH 157 432 160 HOH HOH A . F 6 HOH 158 433 161 HOH HOH A . F 6 HOH 159 434 163 HOH HOH A . F 6 HOH 160 435 164 HOH HOH A . F 6 HOH 161 436 167 HOH HOH A . F 6 HOH 162 437 168 HOH HOH A . F 6 HOH 163 438 169 HOH HOH A . F 6 HOH 164 439 170 HOH HOH A . F 6 HOH 165 440 171 HOH HOH A . F 6 HOH 166 441 172 HOH HOH A . F 6 HOH 167 442 173 HOH HOH A . F 6 HOH 168 443 174 HOH HOH A . F 6 HOH 169 444 175 HOH HOH A . F 6 HOH 170 445 179 HOH HOH A . F 6 HOH 171 446 180 HOH HOH A . F 6 HOH 172 447 182 HOH HOH A . F 6 HOH 173 448 183 HOH HOH A . F 6 HOH 174 449 184 HOH HOH A . F 6 HOH 175 450 185 HOH HOH A . F 6 HOH 176 451 186 HOH HOH A . F 6 HOH 177 452 187 HOH HOH A . F 6 HOH 178 453 188 HOH HOH A . F 6 HOH 179 454 190 HOH HOH A . F 6 HOH 180 455 191 HOH HOH A . F 6 HOH 181 456 192 HOH HOH A . F 6 HOH 182 457 193 HOH HOH A . F 6 HOH 183 458 195 HOH HOH A . F 6 HOH 184 459 196 HOH HOH A . F 6 HOH 185 460 197 HOH HOH A . F 6 HOH 186 461 198 HOH HOH A . F 6 HOH 187 462 199 HOH HOH A . F 6 HOH 188 463 200 HOH HOH A . F 6 HOH 189 464 201 HOH HOH A . F 6 HOH 190 465 202 HOH HOH A . F 6 HOH 191 466 203 HOH HOH A . F 6 HOH 192 467 204 HOH HOH A . F 6 HOH 193 468 205 HOH HOH A . F 6 HOH 194 469 206 HOH HOH A . F 6 HOH 195 470 207 HOH HOH A . F 6 HOH 196 471 210 HOH HOH A . F 6 HOH 197 472 211 HOH HOH A . F 6 HOH 198 473 212 HOH HOH A . F 6 HOH 199 474 213 HOH HOH A . F 6 HOH 200 475 214 HOH HOH A . F 6 HOH 201 476 215 HOH HOH A . F 6 HOH 202 477 216 HOH HOH A . F 6 HOH 203 478 217 HOH HOH A . F 6 HOH 204 479 218 HOH HOH A . F 6 HOH 205 480 219 HOH HOH A . F 6 HOH 206 481 220 HOH HOH A . F 6 HOH 207 482 221 HOH HOH A . F 6 HOH 208 483 222 HOH HOH A . F 6 HOH 209 484 223 HOH HOH A . F 6 HOH 210 485 224 HOH HOH A . F 6 HOH 211 486 226 HOH HOH A . F 6 HOH 212 487 227 HOH HOH A . F 6 HOH 213 488 228 HOH HOH A . F 6 HOH 214 489 229 HOH HOH A . F 6 HOH 215 490 230 HOH HOH A . F 6 HOH 216 491 231 HOH HOH A . F 6 HOH 217 492 232 HOH HOH A . F 6 HOH 218 493 233 HOH HOH A . F 6 HOH 219 494 235 HOH HOH A . F 6 HOH 220 495 236 HOH HOH A . F 6 HOH 221 496 237 HOH HOH A . F 6 HOH 222 497 238 HOH HOH A . F 6 HOH 223 498 239 HOH HOH A . F 6 HOH 224 499 241 HOH HOH A . F 6 HOH 225 500 243 HOH HOH A . F 6 HOH 226 501 245 HOH HOH A . F 6 HOH 227 502 247 HOH HOH A . F 6 HOH 228 503 248 HOH HOH A . F 6 HOH 229 504 249 HOH HOH A . F 6 HOH 230 505 250 HOH HOH A . F 6 HOH 231 506 251 HOH HOH A . F 6 HOH 232 507 252 HOH HOH A . F 6 HOH 233 508 253 HOH HOH A . F 6 HOH 234 509 254 HOH HOH A . F 6 HOH 235 510 255 HOH HOH A . F 6 HOH 236 511 256 HOH HOH A . F 6 HOH 237 512 257 HOH HOH A . F 6 HOH 238 513 258 HOH HOH A . F 6 HOH 239 514 260 HOH HOH A . F 6 HOH 240 515 261 HOH HOH A . F 6 HOH 241 516 262 HOH HOH A . F 6 HOH 242 517 263 HOH HOH A . F 6 HOH 243 518 265 HOH HOH A . F 6 HOH 244 519 266 HOH HOH A . F 6 HOH 245 520 267 HOH HOH A . F 6 HOH 246 521 268 HOH HOH A . F 6 HOH 247 522 269 HOH HOH A . F 6 HOH 248 523 270 HOH HOH A . F 6 HOH 249 524 271 HOH HOH A . F 6 HOH 250 525 272 HOH HOH A . F 6 HOH 251 526 274 HOH HOH A . F 6 HOH 252 527 67 HOH HOH A . F 6 HOH 253 528 259 HOH HOH A . G 6 HOH 1 46 46 HOH HOH B . G 6 HOH 2 59 59 HOH HOH B . G 6 HOH 3 64 64 HOH HOH B . G 6 HOH 4 69 69 HOH HOH B . G 6 HOH 5 83 83 HOH HOH B . G 6 HOH 6 92 92 HOH HOH B . G 6 HOH 7 96 96 HOH HOH B . G 6 HOH 8 117 117 HOH HOH B . G 6 HOH 9 119 119 HOH HOH B . G 6 HOH 10 124 124 HOH HOH B . G 6 HOH 11 127 127 HOH HOH B . G 6 HOH 12 128 128 HOH HOH B . G 6 HOH 13 134 134 HOH HOH B . G 6 HOH 14 146 146 HOH HOH B . G 6 HOH 15 158 158 HOH HOH B . G 6 HOH 16 162 162 HOH HOH B . G 6 HOH 17 166 166 HOH HOH B . G 6 HOH 18 176 176 HOH HOH B . G 6 HOH 19 177 177 HOH HOH B . G 6 HOH 20 181 181 HOH HOH B . G 6 HOH 21 189 189 HOH HOH B . G 6 HOH 22 194 194 HOH HOH B . G 6 HOH 23 225 225 HOH HOH B . G 6 HOH 24 234 234 HOH HOH B . G 6 HOH 25 240 240 HOH HOH B . G 6 HOH 26 242 242 HOH HOH B . G 6 HOH 27 244 244 HOH HOH B . G 6 HOH 28 246 246 HOH HOH B . G 6 HOH 29 264 264 HOH HOH B . G 6 HOH 30 273 273 HOH HOH B . G 6 HOH 31 276 276 HOH HOH B . G 6 HOH 32 286 286 HOH HOH B . G 6 HOH 33 293 293 HOH HOH B . H 6 HOH 1 41 41 HOH HOH C . H 6 HOH 2 82 82 HOH HOH C . H 6 HOH 3 95 95 HOH HOH C . H 6 HOH 4 98 98 HOH HOH C . H 6 HOH 5 137 137 HOH HOH C . H 6 HOH 6 165 165 HOH HOH C . H 6 HOH 7 178 178 HOH HOH C . H 6 HOH 8 208 208 HOH HOH C . H 6 HOH 9 209 209 HOH HOH C . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id OGX _pdbx_struct_mod_residue.label_seq_id 8 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id OGX _pdbx_struct_mod_residue.auth_seq_id 8 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4400 ? 1 MORE -20 ? 1 'SSA (A^2)' 14980 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 248 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 251 ? A CYS 252 ? 1_555 108.6 ? 2 SG ? A CYS 248 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 268 ? A CYS 269 ? 1_555 110.5 ? 3 SG ? A CYS 251 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 268 ? A CYS 269 ? 1_555 98.2 ? 4 SG ? A CYS 248 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 271 ? A CYS 272 ? 1_555 111.2 ? 5 SG ? A CYS 251 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 271 ? A CYS 272 ? 1_555 112.2 ? 6 SG ? A CYS 268 ? A CYS 269 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? A CYS 271 ? A CYS 272 ? 1_555 115.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2021-10-13 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_ref_seq_dif.details' 22 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -14.3493 51.9334 17.2723 0.0304 0.0331 0.0418 0.0053 0.0067 0.0204 0.0304 0.4193 0.7015 -0.0517 0.0591 -0.4480 0.0054 -0.0420 0.0310 -0.0289 -0.0168 -0.0160 -0.0618 0.0469 0.0255 'X-RAY DIFFRACTION' 2 ? refined -7.7669 58.5981 33.4798 0.0441 0.1617 0.0591 0.0654 -0.0065 0.0081 0.5850 0.7831 0.2377 -0.2610 0.6785 -0.4188 -0.2775 0.1820 0.0159 -0.1265 0.0139 -0.2410 0.4391 -0.1116 0.0712 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 274 'chain A' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 B 15 'chain B or chain C' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 2 C 3 C 16 'chain B or chain C' ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 6 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 6 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 6 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 114.49 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 6.19 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? -108.42 -169.64 2 1 LEU A 66 ? ? -104.53 -139.19 3 1 ASP A 67 ? ? -88.13 -72.50 4 1 ARG A 76 ? ? 50.65 -124.00 5 1 ASP A 110 ? ? -164.09 95.57 6 1 ARG A 223 ? ? -142.02 -66.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 133 ? CG ? A GLU 132 CG 2 1 Y 1 A GLU 133 ? CD ? A GLU 132 CD 3 1 Y 1 A GLU 133 ? OE1 ? A GLU 132 OE1 4 1 Y 1 A GLU 133 ? OE2 ? A GLU 132 OE2 5 1 Y 1 A LYS 156 ? CD ? A LYS 155 CD 6 1 Y 1 A LYS 156 ? CE ? A LYS 155 CE 7 1 Y 1 A LYS 156 ? NZ ? A LYS 155 NZ 8 1 Y 1 A LYS 198 ? CD ? A LYS 197 CD 9 1 Y 1 A LYS 198 ? CE ? A LYS 197 CE 10 1 Y 1 A LYS 198 ? NZ ? A LYS 197 NZ 11 1 Y 1 A GLU 201 ? CG ? A GLU 200 CG 12 1 Y 1 A GLU 201 ? CD ? A GLU 200 CD 13 1 Y 1 A GLU 201 ? OE1 ? A GLU 200 OE1 14 1 Y 1 A GLU 201 ? OE2 ? A GLU 200 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DC 16 ? B DC 16 2 1 Y 1 C DT 1 ? C DT 1 3 1 Y 1 C DG 2 ? C DG 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 GOL C1 C N N 280 GOL O1 O N N 281 GOL C2 C N N 282 GOL O2 O N N 283 GOL C3 C N N 284 GOL O3 O N N 285 GOL H11 H N N 286 GOL H12 H N N 287 GOL HO1 H N N 288 GOL H2 H N N 289 GOL HO2 H N N 290 GOL H31 H N N 291 GOL H32 H N N 292 GOL HO3 H N N 293 HIS N N N N 294 HIS CA C N S 295 HIS C C N N 296 HIS O O N N 297 HIS CB C N N 298 HIS CG C Y N 299 HIS ND1 N Y N 300 HIS CD2 C Y N 301 HIS CE1 C Y N 302 HIS NE2 N Y N 303 HIS OXT O N N 304 HIS H H N N 305 HIS H2 H N N 306 HIS HA H N N 307 HIS HB2 H N N 308 HIS HB3 H N N 309 HIS HD1 H N N 310 HIS HD2 H N N 311 HIS HE1 H N N 312 HIS HE2 H N N 313 HIS HXT H N N 314 HOH O O N N 315 HOH H1 H N N 316 HOH H2 H N N 317 ILE N N N N 318 ILE CA C N S 319 ILE C C N N 320 ILE O O N N 321 ILE CB C N S 322 ILE CG1 C N N 323 ILE CG2 C N N 324 ILE CD1 C N N 325 ILE OXT O N N 326 ILE H H N N 327 ILE H2 H N N 328 ILE HA H N N 329 ILE HB H N N 330 ILE HG12 H N N 331 ILE HG13 H N N 332 ILE HG21 H N N 333 ILE HG22 H N N 334 ILE HG23 H N N 335 ILE HD11 H N N 336 ILE HD12 H N N 337 ILE HD13 H N N 338 ILE HXT H N N 339 LEU N N N N 340 LEU CA C N S 341 LEU C C N N 342 LEU O O N N 343 LEU CB C N N 344 LEU CG C N N 345 LEU CD1 C N N 346 LEU CD2 C N N 347 LEU OXT O N N 348 LEU H H N N 349 LEU H2 H N N 350 LEU HA H N N 351 LEU HB2 H N N 352 LEU HB3 H N N 353 LEU HG H N N 354 LEU HD11 H N N 355 LEU HD12 H N N 356 LEU HD13 H N N 357 LEU HD21 H N N 358 LEU HD22 H N N 359 LEU HD23 H N N 360 LEU HXT H N N 361 LYS N N N N 362 LYS CA C N S 363 LYS C C N N 364 LYS O O N N 365 LYS CB C N N 366 LYS CG C N N 367 LYS CD C N N 368 LYS CE C N N 369 LYS NZ N N N 370 LYS OXT O N N 371 LYS H H N N 372 LYS H2 H N N 373 LYS HA H N N 374 LYS HB2 H N N 375 LYS HB3 H N N 376 LYS HG2 H N N 377 LYS HG3 H N N 378 LYS HD2 H N N 379 LYS HD3 H N N 380 LYS HE2 H N N 381 LYS HE3 H N N 382 LYS HZ1 H N N 383 LYS HZ2 H N N 384 LYS HZ3 H N N 385 LYS HXT H N N 386 MET N N N N 387 MET CA C N S 388 MET C C N N 389 MET O O N N 390 MET CB C N N 391 MET CG C N N 392 MET SD S N N 393 MET CE C N N 394 MET OXT O N N 395 MET H H N N 396 MET H2 H N N 397 MET HA H N N 398 MET HB2 H N N 399 MET HB3 H N N 400 MET HG2 H N N 401 MET HG3 H N N 402 MET HE1 H N N 403 MET HE2 H N N 404 MET HE3 H N N 405 MET HXT H N N 406 OGX OP2 O N N 407 OGX P P N N 408 OGX S S N N 409 OGX N1 N N N 410 OGX C2 C N N 411 OGX N2 N N N 412 OGX N3 N N N 413 OGX C4 C N N 414 OGX N4 N N N 415 OGX C5 C N N 416 OGX C6 C N N 417 OGX O6 O N N 418 OGX N7 N N N 419 OGX C8 C N N 420 OGX O8 O N N 421 OGX N9 N N N 422 OGX "C1'" C N R 423 OGX "C2'" C N N 424 OGX "C3'" C N S 425 OGX "O3'" O N N 426 OGX "C4'" C N R 427 OGX "O4'" O N N 428 OGX "C5'" C N N 429 OGX "O5'" O N N 430 OGX "C7'" C N N 431 OGX "C8'" C N N 432 OGX OP1 O N N 433 OGX HS H N N 434 OGX HN1 H N N 435 OGX HN2 H N N 436 OGX HN2A H N N 437 OGX HN4 H N N 438 OGX HN7 H N N 439 OGX "H1'" H N N 440 OGX "H2'" H N N 441 OGX "H2'A" H N N 442 OGX "H3'" H N N 443 OGX "HO3'" H N N 444 OGX "H4'" H N N 445 OGX "H5'" H N N 446 OGX "H5'A" H N N 447 OGX "H7'" H N N 448 OGX "H7'A" H N N 449 OGX "H8'" H N N 450 OGX "H8'A" H N N 451 OGX HOP1 H N N 452 PHE N N N N 453 PHE CA C N S 454 PHE C C N N 455 PHE O O N N 456 PHE CB C N N 457 PHE CG C Y N 458 PHE CD1 C Y N 459 PHE CD2 C Y N 460 PHE CE1 C Y N 461 PHE CE2 C Y N 462 PHE CZ C Y N 463 PHE OXT O N N 464 PHE H H N N 465 PHE H2 H N N 466 PHE HA H N N 467 PHE HB2 H N N 468 PHE HB3 H N N 469 PHE HD1 H N N 470 PHE HD2 H N N 471 PHE HE1 H N N 472 PHE HE2 H N N 473 PHE HZ H N N 474 PHE HXT H N N 475 PRO N N N N 476 PRO CA C N S 477 PRO C C N N 478 PRO O O N N 479 PRO CB C N N 480 PRO CG C N N 481 PRO CD C N N 482 PRO OXT O N N 483 PRO H H N N 484 PRO HA H N N 485 PRO HB2 H N N 486 PRO HB3 H N N 487 PRO HG2 H N N 488 PRO HG3 H N N 489 PRO HD2 H N N 490 PRO HD3 H N N 491 PRO HXT H N N 492 SER N N N N 493 SER CA C N S 494 SER C C N N 495 SER O O N N 496 SER CB C N N 497 SER OG O N N 498 SER OXT O N N 499 SER H H N N 500 SER H2 H N N 501 SER HA H N N 502 SER HB2 H N N 503 SER HB3 H N N 504 SER HG H N N 505 SER HXT H N N 506 THR N N N N 507 THR CA C N S 508 THR C C N N 509 THR O O N N 510 THR CB C N R 511 THR OG1 O N N 512 THR CG2 C N N 513 THR OXT O N N 514 THR H H N N 515 THR H2 H N N 516 THR HA H N N 517 THR HB H N N 518 THR HG1 H N N 519 THR HG21 H N N 520 THR HG22 H N N 521 THR HG23 H N N 522 THR HXT H N N 523 TRP N N N N 524 TRP CA C N S 525 TRP C C N N 526 TRP O O N N 527 TRP CB C N N 528 TRP CG C Y N 529 TRP CD1 C Y N 530 TRP CD2 C Y N 531 TRP NE1 N Y N 532 TRP CE2 C Y N 533 TRP CE3 C Y N 534 TRP CZ2 C Y N 535 TRP CZ3 C Y N 536 TRP CH2 C Y N 537 TRP OXT O N N 538 TRP H H N N 539 TRP H2 H N N 540 TRP HA H N N 541 TRP HB2 H N N 542 TRP HB3 H N N 543 TRP HD1 H N N 544 TRP HE1 H N N 545 TRP HE3 H N N 546 TRP HZ2 H N N 547 TRP HZ3 H N N 548 TRP HH2 H N N 549 TRP HXT H N N 550 TYR N N N N 551 TYR CA C N S 552 TYR C C N N 553 TYR O O N N 554 TYR CB C N N 555 TYR CG C Y N 556 TYR CD1 C Y N 557 TYR CD2 C Y N 558 TYR CE1 C Y N 559 TYR CE2 C Y N 560 TYR CZ C Y N 561 TYR OH O N N 562 TYR OXT O N N 563 TYR H H N N 564 TYR H2 H N N 565 TYR HA H N N 566 TYR HB2 H N N 567 TYR HB3 H N N 568 TYR HD1 H N N 569 TYR HD2 H N N 570 TYR HE1 H N N 571 TYR HE2 H N N 572 TYR HH H N N 573 TYR HXT H N N 574 VAL N N N N 575 VAL CA C N S 576 VAL C C N N 577 VAL O O N N 578 VAL CB C N N 579 VAL CG1 C N N 580 VAL CG2 C N N 581 VAL OXT O N N 582 VAL H H N N 583 VAL H2 H N N 584 VAL HA H N N 585 VAL HB H N N 586 VAL HG11 H N N 587 VAL HG12 H N N 588 VAL HG13 H N N 589 VAL HG21 H N N 590 VAL HG22 H N N 591 VAL HG23 H N N 592 VAL HXT H N N 593 ZN ZN ZN N N 594 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 GOL C1 O1 sing N N 278 GOL C1 C2 sing N N 279 GOL C1 H11 sing N N 280 GOL C1 H12 sing N N 281 GOL O1 HO1 sing N N 282 GOL C2 O2 sing N N 283 GOL C2 C3 sing N N 284 GOL C2 H2 sing N N 285 GOL O2 HO2 sing N N 286 GOL C3 O3 sing N N 287 GOL C3 H31 sing N N 288 GOL C3 H32 sing N N 289 GOL O3 HO3 sing N N 290 HIS N CA sing N N 291 HIS N H sing N N 292 HIS N H2 sing N N 293 HIS CA C sing N N 294 HIS CA CB sing N N 295 HIS CA HA sing N N 296 HIS C O doub N N 297 HIS C OXT sing N N 298 HIS CB CG sing N N 299 HIS CB HB2 sing N N 300 HIS CB HB3 sing N N 301 HIS CG ND1 sing Y N 302 HIS CG CD2 doub Y N 303 HIS ND1 CE1 doub Y N 304 HIS ND1 HD1 sing N N 305 HIS CD2 NE2 sing Y N 306 HIS CD2 HD2 sing N N 307 HIS CE1 NE2 sing Y N 308 HIS CE1 HE1 sing N N 309 HIS NE2 HE2 sing N N 310 HIS OXT HXT sing N N 311 HOH O H1 sing N N 312 HOH O H2 sing N N 313 ILE N CA sing N N 314 ILE N H sing N N 315 ILE N H2 sing N N 316 ILE CA C sing N N 317 ILE CA CB sing N N 318 ILE CA HA sing N N 319 ILE C O doub N N 320 ILE C OXT sing N N 321 ILE CB CG1 sing N N 322 ILE CB CG2 sing N N 323 ILE CB HB sing N N 324 ILE CG1 CD1 sing N N 325 ILE CG1 HG12 sing N N 326 ILE CG1 HG13 sing N N 327 ILE CG2 HG21 sing N N 328 ILE CG2 HG22 sing N N 329 ILE CG2 HG23 sing N N 330 ILE CD1 HD11 sing N N 331 ILE CD1 HD12 sing N N 332 ILE CD1 HD13 sing N N 333 ILE OXT HXT sing N N 334 LEU N CA sing N N 335 LEU N H sing N N 336 LEU N H2 sing N N 337 LEU CA C sing N N 338 LEU CA CB sing N N 339 LEU CA HA sing N N 340 LEU C O doub N N 341 LEU C OXT sing N N 342 LEU CB CG sing N N 343 LEU CB HB2 sing N N 344 LEU CB HB3 sing N N 345 LEU CG CD1 sing N N 346 LEU CG CD2 sing N N 347 LEU CG HG sing N N 348 LEU CD1 HD11 sing N N 349 LEU CD1 HD12 sing N N 350 LEU CD1 HD13 sing N N 351 LEU CD2 HD21 sing N N 352 LEU CD2 HD22 sing N N 353 LEU CD2 HD23 sing N N 354 LEU OXT HXT sing N N 355 LYS N CA sing N N 356 LYS N H sing N N 357 LYS N H2 sing N N 358 LYS CA C sing N N 359 LYS CA CB sing N N 360 LYS CA HA sing N N 361 LYS C O doub N N 362 LYS C OXT sing N N 363 LYS CB CG sing N N 364 LYS CB HB2 sing N N 365 LYS CB HB3 sing N N 366 LYS CG CD sing N N 367 LYS CG HG2 sing N N 368 LYS CG HG3 sing N N 369 LYS CD CE sing N N 370 LYS CD HD2 sing N N 371 LYS CD HD3 sing N N 372 LYS CE NZ sing N N 373 LYS CE HE2 sing N N 374 LYS CE HE3 sing N N 375 LYS NZ HZ1 sing N N 376 LYS NZ HZ2 sing N N 377 LYS NZ HZ3 sing N N 378 LYS OXT HXT sing N N 379 MET N CA sing N N 380 MET N H sing N N 381 MET N H2 sing N N 382 MET CA C sing N N 383 MET CA CB sing N N 384 MET CA HA sing N N 385 MET C O doub N N 386 MET C OXT sing N N 387 MET CB CG sing N N 388 MET CB HB2 sing N N 389 MET CB HB3 sing N N 390 MET CG SD sing N N 391 MET CG HG2 sing N N 392 MET CG HG3 sing N N 393 MET SD CE sing N N 394 MET CE HE1 sing N N 395 MET CE HE2 sing N N 396 MET CE HE3 sing N N 397 MET OXT HXT sing N N 398 OGX P OP2 doub N N 399 OGX "O5'" P sing N N 400 OGX P N4 sing N N 401 OGX P OP1 sing N N 402 OGX S "C8'" sing N N 403 OGX S HS sing N N 404 OGX C6 N1 sing N N 405 OGX N1 C2 sing N N 406 OGX N1 HN1 sing N N 407 OGX N3 C2 doub N N 408 OGX C2 N2 sing N N 409 OGX N2 HN2 sing N N 410 OGX N2 HN2A sing N N 411 OGX C4 N3 sing N N 412 OGX N9 C4 sing N N 413 OGX C5 C4 doub N N 414 OGX N4 "C7'" sing N N 415 OGX N4 HN4 sing N N 416 OGX N7 C5 sing N N 417 OGX C5 C6 sing N N 418 OGX O6 C6 doub N N 419 OGX C8 N7 sing N N 420 OGX N7 HN7 sing N N 421 OGX O8 C8 doub N N 422 OGX C8 N9 sing N N 423 OGX N9 "C1'" sing N N 424 OGX "C1'" "C2'" sing N N 425 OGX "C1'" "O4'" sing N N 426 OGX "C1'" "H1'" sing N N 427 OGX "C2'" "C3'" sing N N 428 OGX "C2'" "H2'" sing N N 429 OGX "C2'" "H2'A" sing N N 430 OGX "O3'" "C3'" sing N N 431 OGX "C3'" "C4'" sing N N 432 OGX "C3'" "H3'" sing N N 433 OGX "O3'" "HO3'" sing N N 434 OGX "O4'" "C4'" sing N N 435 OGX "C4'" "C5'" sing N N 436 OGX "C4'" "H4'" sing N N 437 OGX "C5'" "O5'" sing N N 438 OGX "C5'" "H5'" sing N N 439 OGX "C5'" "H5'A" sing N N 440 OGX "C8'" "C7'" sing N N 441 OGX "C7'" "H7'" sing N N 442 OGX "C7'" "H7'A" sing N N 443 OGX "C8'" "H8'" sing N N 444 OGX "C8'" "H8'A" sing N N 445 OGX OP1 HOP1 sing N N 446 PHE N CA sing N N 447 PHE N H sing N N 448 PHE N H2 sing N N 449 PHE CA C sing N N 450 PHE CA CB sing N N 451 PHE CA HA sing N N 452 PHE C O doub N N 453 PHE C OXT sing N N 454 PHE CB CG sing N N 455 PHE CB HB2 sing N N 456 PHE CB HB3 sing N N 457 PHE CG CD1 doub Y N 458 PHE CG CD2 sing Y N 459 PHE CD1 CE1 sing Y N 460 PHE CD1 HD1 sing N N 461 PHE CD2 CE2 doub Y N 462 PHE CD2 HD2 sing N N 463 PHE CE1 CZ doub Y N 464 PHE CE1 HE1 sing N N 465 PHE CE2 CZ sing Y N 466 PHE CE2 HE2 sing N N 467 PHE CZ HZ sing N N 468 PHE OXT HXT sing N N 469 PRO N CA sing N N 470 PRO N CD sing N N 471 PRO N H sing N N 472 PRO CA C sing N N 473 PRO CA CB sing N N 474 PRO CA HA sing N N 475 PRO C O doub N N 476 PRO C OXT sing N N 477 PRO CB CG sing N N 478 PRO CB HB2 sing N N 479 PRO CB HB3 sing N N 480 PRO CG CD sing N N 481 PRO CG HG2 sing N N 482 PRO CG HG3 sing N N 483 PRO CD HD2 sing N N 484 PRO CD HD3 sing N N 485 PRO OXT HXT sing N N 486 SER N CA sing N N 487 SER N H sing N N 488 SER N H2 sing N N 489 SER CA C sing N N 490 SER CA CB sing N N 491 SER CA HA sing N N 492 SER C O doub N N 493 SER C OXT sing N N 494 SER CB OG sing N N 495 SER CB HB2 sing N N 496 SER CB HB3 sing N N 497 SER OG HG sing N N 498 SER OXT HXT sing N N 499 THR N CA sing N N 500 THR N H sing N N 501 THR N H2 sing N N 502 THR CA C sing N N 503 THR CA CB sing N N 504 THR CA HA sing N N 505 THR C O doub N N 506 THR C OXT sing N N 507 THR CB OG1 sing N N 508 THR CB CG2 sing N N 509 THR CB HB sing N N 510 THR OG1 HG1 sing N N 511 THR CG2 HG21 sing N N 512 THR CG2 HG22 sing N N 513 THR CG2 HG23 sing N N 514 THR OXT HXT sing N N 515 TRP N CA sing N N 516 TRP N H sing N N 517 TRP N H2 sing N N 518 TRP CA C sing N N 519 TRP CA CB sing N N 520 TRP CA HA sing N N 521 TRP C O doub N N 522 TRP C OXT sing N N 523 TRP CB CG sing N N 524 TRP CB HB2 sing N N 525 TRP CB HB3 sing N N 526 TRP CG CD1 doub Y N 527 TRP CG CD2 sing Y N 528 TRP CD1 NE1 sing Y N 529 TRP CD1 HD1 sing N N 530 TRP CD2 CE2 doub Y N 531 TRP CD2 CE3 sing Y N 532 TRP NE1 CE2 sing Y N 533 TRP NE1 HE1 sing N N 534 TRP CE2 CZ2 sing Y N 535 TRP CE3 CZ3 doub Y N 536 TRP CE3 HE3 sing N N 537 TRP CZ2 CH2 doub Y N 538 TRP CZ2 HZ2 sing N N 539 TRP CZ3 CH2 sing Y N 540 TRP CZ3 HZ3 sing N N 541 TRP CH2 HH2 sing N N 542 TRP OXT HXT sing N N 543 TYR N CA sing N N 544 TYR N H sing N N 545 TYR N H2 sing N N 546 TYR CA C sing N N 547 TYR CA CB sing N N 548 TYR CA HA sing N N 549 TYR C O doub N N 550 TYR C OXT sing N N 551 TYR CB CG sing N N 552 TYR CB HB2 sing N N 553 TYR CB HB3 sing N N 554 TYR CG CD1 doub Y N 555 TYR CG CD2 sing Y N 556 TYR CD1 CE1 sing Y N 557 TYR CD1 HD1 sing N N 558 TYR CD2 CE2 doub Y N 559 TYR CD2 HD2 sing N N 560 TYR CE1 CZ doub Y N 561 TYR CE1 HE1 sing N N 562 TYR CE2 CZ sing Y N 563 TYR CE2 HE2 sing N N 564 TYR CZ OH sing N N 565 TYR OH HH sing N N 566 TYR OXT HXT sing N N 567 VAL N CA sing N N 568 VAL N H sing N N 569 VAL N H2 sing N N 570 VAL CA C sing N N 571 VAL CA CB sing N N 572 VAL CA HA sing N N 573 VAL C O doub N N 574 VAL C OXT sing N N 575 VAL CB CG1 sing N N 576 VAL CB CG2 sing N N 577 VAL CB HB sing N N 578 VAL CG1 HG11 sing N N 579 VAL CG1 HG12 sing N N 580 VAL CG1 HG13 sing N N 581 VAL CG2 HG21 sing N N 582 VAL CG2 HG22 sing N N 583 VAL CG2 HG23 sing N N 584 VAL OXT HXT sing N N 585 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3JR5 'double helix' 3JR5 'b-form double helix' 3JR5 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 16 1_555 -0.493 -0.076 -0.109 -5.839 -11.378 1.067 1 B_DG2:DC16_C B 2 ? C 16 ? 19 1 1 B DG 3 1_555 C DC 15 1_555 -0.123 -0.006 0.135 -12.941 -14.412 2.835 2 B_DG3:DC15_C B 3 ? C 15 ? 19 1 1 B DT 4 1_555 C DA 14 1_555 -0.177 -0.103 0.056 -0.552 -9.301 -0.317 3 B_DT4:DA14_C B 4 ? C 14 ? 20 1 1 B DA 5 1_555 C DT 13 1_555 0.197 -0.088 -0.012 -1.796 -11.224 -0.564 4 B_DA5:DT13_C B 5 ? C 13 ? 20 1 1 B DG 6 1_555 C DC 12 1_555 -0.150 -0.103 -0.063 1.363 -13.626 2.801 5 B_DG6:DC12_C B 6 ? C 12 ? 19 1 1 B DA 7 1_555 C DT 11 1_555 0.119 -0.030 -0.093 -7.039 -12.602 -2.804 6 B_DA7:DT11_C B 7 ? C 11 ? 20 1 1 B DC 8 1_555 C DG 10 1_555 0.261 -0.052 0.103 -2.425 -4.645 1.332 7 B_DC8:DG10_C B 8 ? C 10 ? 19 1 1 B DT 9 1_555 C DA 9 1_555 -0.140 -0.104 -0.328 10.997 3.068 -1.373 8 B_DT9:DA9_C B 9 ? C 9 ? 20 1 1 B DG 11 1_555 C DC 7 1_555 -0.122 -0.080 -0.129 -8.824 -1.541 -0.657 9 B_DG11:DC7_C B 11 ? C 7 ? 19 1 1 B DG 12 1_555 C DC 6 1_555 -0.224 -0.118 -0.106 2.433 -11.939 0.775 10 B_DG12:DC6_C B 12 ? C 6 ? 19 1 1 B DA 13 1_555 C DT 5 1_555 -0.218 -0.175 -0.290 -0.247 -10.920 -3.157 11 B_DA13:DT5_C B 13 ? C 5 ? 20 1 1 B DC 14 1_555 C DG 4 1_555 0.478 -0.147 -0.007 -0.431 -9.841 3.646 12 B_DC14:DG4_C B 14 ? C 4 ? 19 1 1 B DG 15 1_555 C DC 3 1_555 -0.134 0.497 0.121 -0.757 -4.165 15.900 13 B_DG15:DC3_C B 15 ? C 3 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 16 1_555 B DG 3 1_555 C DC 15 1_555 0.128 -0.430 3.519 -4.156 4.339 32.390 -1.546 -0.981 3.392 7.695 7.372 32.927 1 BB_DG2DG3:DC15DC16_CC B 2 ? C 16 ? B 3 ? C 15 ? 1 B DG 3 1_555 C DC 15 1_555 B DT 4 1_555 C DA 14 1_555 -0.764 -0.649 2.952 2.308 6.484 31.969 -2.135 1.707 2.711 11.605 -4.131 32.683 2 BB_DG3DT4:DA14DC15_CC B 3 ? C 15 ? B 4 ? C 14 ? 1 B DT 4 1_555 C DA 14 1_555 B DA 5 1_555 C DT 13 1_555 -0.326 0.304 3.368 -1.137 0.035 41.015 0.429 0.338 3.376 0.051 1.623 41.031 3 BB_DT4DA5:DT13DA14_CC B 4 ? C 14 ? B 5 ? C 13 ? 1 B DA 5 1_555 C DT 13 1_555 B DG 6 1_555 C DC 12 1_555 1.014 -0.133 3.340 1.190 3.263 27.076 -1.117 -1.845 3.342 6.934 -2.528 27.294 4 BB_DA5DG6:DC12DT13_CC B 5 ? C 13 ? B 6 ? C 12 ? 1 B DG 6 1_555 C DC 12 1_555 B DA 7 1_555 C DT 11 1_555 -1.320 0.097 3.357 -5.922 0.652 40.954 0.064 1.200 3.507 0.926 8.410 41.367 5 BB_DG6DA7:DT11DC12_CC B 6 ? C 12 ? B 7 ? C 11 ? 1 B DA 7 1_555 C DT 11 1_555 B DC 8 1_555 C DG 10 1_555 0.734 -0.717 3.201 -1.076 2.686 33.717 -1.650 -1.430 3.112 4.620 1.851 33.838 6 BB_DA7DC8:DG10DT11_CC B 7 ? C 11 ? B 8 ? C 10 ? 1 B DC 8 1_555 C DG 10 1_555 B DT 9 1_555 C DA 9 1_555 -0.477 -0.320 3.042 4.546 5.049 25.251 -1.955 2.179 2.799 11.291 -10.166 26.135 7 BB_DC8DT9:DA9DG10_CC B 8 ? C 10 ? B 9 ? C 9 ? 1 B DG 11 1_555 C DC 7 1_555 B DG 12 1_555 C DC 6 1_555 0.046 -0.190 3.192 -1.576 10.551 26.114 -2.776 -0.450 2.891 22.207 3.318 28.174 8 BB_DG11DG12:DC6DC7_CC B 11 ? C 7 ? B 12 ? C 6 ? 1 B DG 12 1_555 C DC 6 1_555 B DA 13 1_555 C DT 5 1_555 -0.539 -0.095 3.372 -0.069 2.538 38.303 -0.471 0.810 3.360 3.862 0.105 38.384 9 BB_DG12DA13:DT5DC6_CC B 12 ? C 6 ? B 13 ? C 5 ? 1 B DA 13 1_555 C DT 5 1_555 B DC 14 1_555 C DG 4 1_555 0.513 -0.474 3.327 -1.820 4.514 34.590 -1.475 -1.131 3.212 7.546 3.042 34.921 10 BB_DA13DC14:DG4DT5_CC B 13 ? C 5 ? B 14 ? C 4 ? 1 B DC 14 1_555 C DG 4 1_555 B DG 15 1_555 C DC 3 1_555 0.198 0.157 3.371 -0.442 3.248 36.841 -0.204 -0.374 3.369 5.128 0.697 36.982 11 BB_DC14DG15:DC3DG4_CC B 14 ? C 4 ? B 15 ? C 3 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R2Y _pdbx_initial_refinement_model.details 'PDB entry 1R2Y' #