data_3JRT # _entry.id 3JRT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3JRT RCSB RCSB055078 WWPDB D_1000055078 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC7807 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3JRT _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harrop, S.J.' 1 'Deshpande, C.' 2 'Sureshan, V.' 3 'Boucher, Y.' 4 'Xu, X.' 5 'Cui, H.' 6 'Cuff, M.' 7 'Edwards, A.' 8 'Savchenko, A.' 9 'Joachimiak, A.' 10 'Stokes, H.W.' 11 'Curmi, P.M.G.' 12 'Mabbutt, B.C.' 13 'Midwest Center for Structural Genomics (MCSG)' 14 # _citation.id primary _citation.title 'Integron gene cassettes: a repository of novel protein folds with distinct interaction sites.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first e52934 _citation.page_last e52934 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23349695 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0052934 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sureshan, V.' 1 primary 'Deshpande, C.N.' 2 primary 'Boucher, Y.' 3 primary 'Koenig, J.E.' 4 primary 'Stokes, H.W.' 5 primary 'Harrop, S.J.' 6 primary 'Curmi, P.M.' 7 primary 'Mabbutt, B.C.' 8 # _cell.length_a 85.510 _cell.length_b 85.510 _cell.length_c 46.656 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3JRT _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 64' _symmetry.entry_id 3JRT _symmetry.Int_Tables_number 172 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Integron cassette protein Vpc_cass2' 22282.029 1 ? ? ? ? 2 water nat water 18.015 30 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGRENLYFQGVK(MSE)SDKWIEIEEILSGLIGDLTIAVTVLKDYEGKAFLREPQHQTKRQCIWR LCVYSIVINCRKYVELNQKYGKEFQALIPGHNHIRGVYNNEINKNTAIKKLRNHCVAHVSDKSKYLKPAEVQEEIIK (MSE)FDGNFADEFLDWICPDNISTTDKSESLVGVIELLRDAVSAKL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGRENLYFQGVKMSDKWIEIEEILSGLIGDLTIAVTVLKDYEGKAFLREPQHQTKRQCIWRLCVYSIVI NCRKYVELNQKYGKEFQALIPGHNHIRGVYNNEINKNTAIKKLRNHCVAHVSDKSKYLKPAEVQEEIIKMFDGNFADEFL DWICPDNISTTDKSESLVGVIELLRDAVSAKL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC7807 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 ARG n 1 15 GLU n 1 16 ASN n 1 17 LEU n 1 18 TYR n 1 19 PHE n 1 20 GLN n 1 21 GLY n 1 22 VAL n 1 23 LYS n 1 24 MSE n 1 25 SER n 1 26 ASP n 1 27 LYS n 1 28 TRP n 1 29 ILE n 1 30 GLU n 1 31 ILE n 1 32 GLU n 1 33 GLU n 1 34 ILE n 1 35 LEU n 1 36 SER n 1 37 GLY n 1 38 LEU n 1 39 ILE n 1 40 GLY n 1 41 ASP n 1 42 LEU n 1 43 THR n 1 44 ILE n 1 45 ALA n 1 46 VAL n 1 47 THR n 1 48 VAL n 1 49 LEU n 1 50 LYS n 1 51 ASP n 1 52 TYR n 1 53 GLU n 1 54 GLY n 1 55 LYS n 1 56 ALA n 1 57 PHE n 1 58 LEU n 1 59 ARG n 1 60 GLU n 1 61 PRO n 1 62 GLN n 1 63 HIS n 1 64 GLN n 1 65 THR n 1 66 LYS n 1 67 ARG n 1 68 GLN n 1 69 CYS n 1 70 ILE n 1 71 TRP n 1 72 ARG n 1 73 LEU n 1 74 CYS n 1 75 VAL n 1 76 TYR n 1 77 SER n 1 78 ILE n 1 79 VAL n 1 80 ILE n 1 81 ASN n 1 82 CYS n 1 83 ARG n 1 84 LYS n 1 85 TYR n 1 86 VAL n 1 87 GLU n 1 88 LEU n 1 89 ASN n 1 90 GLN n 1 91 LYS n 1 92 TYR n 1 93 GLY n 1 94 LYS n 1 95 GLU n 1 96 PHE n 1 97 GLN n 1 98 ALA n 1 99 LEU n 1 100 ILE n 1 101 PRO n 1 102 GLY n 1 103 HIS n 1 104 ASN n 1 105 HIS n 1 106 ILE n 1 107 ARG n 1 108 GLY n 1 109 VAL n 1 110 TYR n 1 111 ASN n 1 112 ASN n 1 113 GLU n 1 114 ILE n 1 115 ASN n 1 116 LYS n 1 117 ASN n 1 118 THR n 1 119 ALA n 1 120 ILE n 1 121 LYS n 1 122 LYS n 1 123 LEU n 1 124 ARG n 1 125 ASN n 1 126 HIS n 1 127 CYS n 1 128 VAL n 1 129 ALA n 1 130 HIS n 1 131 VAL n 1 132 SER n 1 133 ASP n 1 134 LYS n 1 135 SER n 1 136 LYS n 1 137 TYR n 1 138 LEU n 1 139 LYS n 1 140 PRO n 1 141 ALA n 1 142 GLU n 1 143 VAL n 1 144 GLN n 1 145 GLU n 1 146 GLU n 1 147 ILE n 1 148 ILE n 1 149 LYS n 1 150 MSE n 1 151 PHE n 1 152 ASP n 1 153 GLY n 1 154 ASN n 1 155 PHE n 1 156 ALA n 1 157 ASP n 1 158 GLU n 1 159 PHE n 1 160 LEU n 1 161 ASP n 1 162 TRP n 1 163 ILE n 1 164 CYS n 1 165 PRO n 1 166 ASP n 1 167 ASN n 1 168 ILE n 1 169 SER n 1 170 THR n 1 171 THR n 1 172 ASP n 1 173 LYS n 1 174 SER n 1 175 GLU n 1 176 SER n 1 177 LEU n 1 178 VAL n 1 179 GLY n 1 180 VAL n 1 181 ILE n 1 182 GLU n 1 183 LEU n 1 184 LEU n 1 185 ARG n 1 186 ASP n 1 187 ALA n 1 188 VAL n 1 189 SER n 1 190 ALA n 1 191 LYS n 1 192 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio paracholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 650003 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'p15TV LIC' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3JRT _struct_ref.pdbx_db_accession 3JRT _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGRENLYFQGVK(MSE)SDKWIEIEEILSGLIGDLTIAVTVLKDYEGKAFLREPQHQTKRQCIWR LCVYSIVINCRKYVELNQKYGKEFQALIPGHNHIRGVYNNEINKNTAIKKLRNHCVAHVSDKSKYLKPAEVQEEIIK(MSE) FDGNFADEFLDWICPDNISTTDKSESLVGVIELLRDAVSAKL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3JRT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 192 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3JRT _struct_ref_seq.db_align_beg -20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -20 _struct_ref_seq.pdbx_auth_seq_align_end 171 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3JRT _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;20% PEG3350, 0.2 M disodium tartrate. In situ proteolysis with chymotrypsin, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 294K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-10-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97929 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3JRT _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 29.003 _reflns.number_all 8801 _reflns.number_obs 8801 _reflns.pdbx_netI_over_sigmaI 21.600 _reflns.pdbx_Rsym_value 0.072 _reflns.pdbx_redundancy 14.100 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.B_iso_Wilson_estimate 48.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all 18536 _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.473 _reflns_shell.meanI_over_sigI_obs 1.6 _reflns_shell.pdbx_Rsym_value 0.473 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 14.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1281 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3JRT _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 27.990 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.900 _refine.ls_number_reflns_obs 8782 _refine.ls_number_reflns_all 8782 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all 0.193 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_R_work 0.189 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.234 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.920 _refine.ls_number_reflns_R_free 871 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 66.901 _refine.solvent_model_param_bsol 60.884 _refine.solvent_model_param_ksol 0.305 _refine.pdbx_isotropic_thermal_model 'TLS and individual isotropic' _refine.aniso_B[1][1] -5.371 _refine.aniso_B[2][2] -5.371 _refine.aniso_B[3][3] 10.742 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.310 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 396.66 _refine.B_iso_min 20.00 _refine.occupancy_max 1.00 _refine.occupancy_min 0.48 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 22.09 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1337 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1367 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 27.990 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1369 0.008 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 1847 0.968 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 207 0.075 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 235 0.004 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 511 15.416 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.300 2.444 6 100.000 1311 . 0.195 0.235 . 144 . 1455 . . 'X-RAY DIFFRACTION' 2.444 2.633 6 100.000 1313 . 0.207 0.261 . 144 . 1457 . . 'X-RAY DIFFRACTION' 2.633 2.898 6 100.000 1292 . 0.198 0.253 . 148 . 1440 . . 'X-RAY DIFFRACTION' 2.898 3.316 6 100.000 1315 . 0.211 0.244 . 147 . 1462 . . 'X-RAY DIFFRACTION' 3.316 4.176 6 100.000 1326 . 0.176 0.255 . 139 . 1465 . . 'X-RAY DIFFRACTION' 4.176 27.992 6 100.000 1354 . 0.172 0.197 . 149 . 1503 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3JRT _struct.title 'Structure from the mobile metagenome of V. paracholerae: Integron cassette protein Vpc_cass2' _struct.pdbx_descriptor 'Integron cassette protein Vpc_cass2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JRT _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown function' _struct_keywords.text ;Integron cassette protein, Vibrio paracholerae, Mobile metagenome, Structural Genomics, PSI-2 Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, Unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 26 ? GLY A 54 ? ASP A 5 GLY A 33 1 ? 29 HELX_P HELX_P2 2 LYS A 55 ? GLN A 62 ? LYS A 34 GLN A 41 5 ? 8 HELX_P HELX_P3 3 HIS A 63 ? TYR A 92 ? HIS A 42 TYR A 71 1 ? 30 HELX_P HELX_P4 4 ILE A 100 ? GLY A 102 ? ILE A 79 GLY A 81 5 ? 3 HELX_P HELX_P5 5 HIS A 103 ? ASN A 117 ? HIS A 82 ASN A 96 1 ? 15 HELX_P HELX_P6 6 ASN A 117 ? ALA A 129 ? ASN A 96 ALA A 108 1 ? 13 HELX_P HELX_P7 7 LYS A 139 ? ASP A 152 ? LYS A 118 ASP A 131 1 ? 14 HELX_P HELX_P8 8 ALA A 156 ? CYS A 164 ? ALA A 135 CYS A 143 1 ? 9 HELX_P HELX_P9 9 ASP A 172 ? GLU A 175 ? ASP A 151 GLU A 154 5 ? 4 HELX_P HELX_P10 10 SER A 176 ? SER A 189 ? SER A 155 SER A 168 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LYS 23 C ? ? ? 1_555 A MSE 24 N ? ? A LYS 2 A MSE 3 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 24 C ? ? ? 1_555 A SER 25 N ? ? A MSE 3 A SER 4 1_555 ? ? ? ? ? ? ? 1.325 ? covale3 covale ? ? A LYS 149 C ? ? ? 1_555 A MSE 150 N ? ? A LYS 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.316 ? covale4 covale ? ? A MSE 150 C ? ? ? 1_555 A PHE 151 N ? ? A MSE 129 A PHE 130 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 3JRT _atom_sites.fract_transf_matrix[1][1] 0.011695 _atom_sites.fract_transf_matrix[1][2] 0.006752 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013504 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021433 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -20 ? ? ? A . n A 1 2 GLY 2 -19 ? ? ? A . n A 1 3 SER 3 -18 ? ? ? A . n A 1 4 SER 4 -17 ? ? ? A . n A 1 5 HIS 5 -16 ? ? ? A . n A 1 6 HIS 6 -15 ? ? ? A . n A 1 7 HIS 7 -14 ? ? ? A . n A 1 8 HIS 8 -13 ? ? ? A . n A 1 9 HIS 9 -12 ? ? ? A . n A 1 10 HIS 10 -11 ? ? ? A . n A 1 11 SER 11 -10 ? ? ? A . n A 1 12 SER 12 -9 ? ? ? A . n A 1 13 GLY 13 -8 ? ? ? A . n A 1 14 ARG 14 -7 ? ? ? A . n A 1 15 GLU 15 -6 ? ? ? A . n A 1 16 ASN 16 -5 ? ? ? A . n A 1 17 LEU 17 -4 ? ? ? A . n A 1 18 TYR 18 -3 ? ? ? A . n A 1 19 PHE 19 -2 ? ? ? A . n A 1 20 GLN 20 -1 ? ? ? A . n A 1 21 GLY 21 0 0 GLY GLY A . n A 1 22 VAL 22 1 1 VAL VAL A . n A 1 23 LYS 23 2 2 LYS LYS A . n A 1 24 MSE 24 3 3 MSE MSE A . n A 1 25 SER 25 4 4 SER SER A . n A 1 26 ASP 26 5 5 ASP ASP A . n A 1 27 LYS 27 6 6 LYS LYS A . n A 1 28 TRP 28 7 7 TRP TRP A . n A 1 29 ILE 29 8 8 ILE ILE A . n A 1 30 GLU 30 9 9 GLU GLU A . n A 1 31 ILE 31 10 10 ILE ILE A . n A 1 32 GLU 32 11 11 GLU GLU A . n A 1 33 GLU 33 12 12 GLU GLU A . n A 1 34 ILE 34 13 13 ILE ILE A . n A 1 35 LEU 35 14 14 LEU LEU A . n A 1 36 SER 36 15 15 SER SER A . n A 1 37 GLY 37 16 16 GLY GLY A . n A 1 38 LEU 38 17 17 LEU LEU A . n A 1 39 ILE 39 18 18 ILE ILE A . n A 1 40 GLY 40 19 19 GLY GLY A . n A 1 41 ASP 41 20 20 ASP ASP A . n A 1 42 LEU 42 21 21 LEU LEU A . n A 1 43 THR 43 22 22 THR THR A . n A 1 44 ILE 44 23 23 ILE ILE A . n A 1 45 ALA 45 24 24 ALA ALA A . n A 1 46 VAL 46 25 25 VAL VAL A . n A 1 47 THR 47 26 26 THR THR A . n A 1 48 VAL 48 27 27 VAL VAL A . n A 1 49 LEU 49 28 28 LEU LEU A . n A 1 50 LYS 50 29 29 LYS LYS A . n A 1 51 ASP 51 30 30 ASP ASP A . n A 1 52 TYR 52 31 31 TYR TYR A . n A 1 53 GLU 53 32 32 GLU GLU A . n A 1 54 GLY 54 33 33 GLY GLY A . n A 1 55 LYS 55 34 34 LYS LYS A . n A 1 56 ALA 56 35 35 ALA ALA A . n A 1 57 PHE 57 36 36 PHE PHE A . n A 1 58 LEU 58 37 37 LEU LEU A . n A 1 59 ARG 59 38 38 ARG ARG A . n A 1 60 GLU 60 39 39 GLU GLU A . n A 1 61 PRO 61 40 40 PRO PRO A . n A 1 62 GLN 62 41 41 GLN GLN A . n A 1 63 HIS 63 42 42 HIS HIS A . n A 1 64 GLN 64 43 43 GLN GLN A . n A 1 65 THR 65 44 44 THR THR A . n A 1 66 LYS 66 45 45 LYS LYS A . n A 1 67 ARG 67 46 46 ARG ARG A . n A 1 68 GLN 68 47 47 GLN GLN A . n A 1 69 CYS 69 48 48 CYS CYS A . n A 1 70 ILE 70 49 49 ILE ILE A . n A 1 71 TRP 71 50 50 TRP TRP A . n A 1 72 ARG 72 51 51 ARG ARG A . n A 1 73 LEU 73 52 52 LEU LEU A . n A 1 74 CYS 74 53 53 CYS CYS A . n A 1 75 VAL 75 54 54 VAL VAL A . n A 1 76 TYR 76 55 55 TYR TYR A . n A 1 77 SER 77 56 56 SER SER A . n A 1 78 ILE 78 57 57 ILE ILE A . n A 1 79 VAL 79 58 58 VAL VAL A . n A 1 80 ILE 80 59 59 ILE ILE A . n A 1 81 ASN 81 60 60 ASN ASN A . n A 1 82 CYS 82 61 61 CYS CYS A . n A 1 83 ARG 83 62 62 ARG ARG A . n A 1 84 LYS 84 63 63 LYS LYS A . n A 1 85 TYR 85 64 64 TYR TYR A . n A 1 86 VAL 86 65 65 VAL VAL A . n A 1 87 GLU 87 66 66 GLU GLU A . n A 1 88 LEU 88 67 67 LEU LEU A . n A 1 89 ASN 89 68 68 ASN ASN A . n A 1 90 GLN 90 69 69 GLN GLN A . n A 1 91 LYS 91 70 70 LYS LYS A . n A 1 92 TYR 92 71 71 TYR TYR A . n A 1 93 GLY 93 72 72 GLY GLY A . n A 1 94 LYS 94 73 73 LYS LYS A . n A 1 95 GLU 95 74 74 GLU GLU A . n A 1 96 PHE 96 75 ? ? ? A . n A 1 97 GLN 97 76 ? ? ? A . n A 1 98 ALA 98 77 ? ? ? A . n A 1 99 LEU 99 78 ? ? ? A . n A 1 100 ILE 100 79 79 ILE ILE A . n A 1 101 PRO 101 80 80 PRO PRO A . n A 1 102 GLY 102 81 81 GLY GLY A . n A 1 103 HIS 103 82 82 HIS HIS A . n A 1 104 ASN 104 83 83 ASN ASN A . n A 1 105 HIS 105 84 84 HIS HIS A . n A 1 106 ILE 106 85 85 ILE ILE A . n A 1 107 ARG 107 86 86 ARG ARG A . n A 1 108 GLY 108 87 87 GLY GLY A . n A 1 109 VAL 109 88 88 VAL VAL A . n A 1 110 TYR 110 89 89 TYR TYR A . n A 1 111 ASN 111 90 90 ASN ASN A . n A 1 112 ASN 112 91 91 ASN ASN A . n A 1 113 GLU 113 92 92 GLU GLU A . n A 1 114 ILE 114 93 93 ILE ILE A . n A 1 115 ASN 115 94 94 ASN ASN A . n A 1 116 LYS 116 95 95 LYS LYS A . n A 1 117 ASN 117 96 96 ASN ASN A . n A 1 118 THR 118 97 97 THR THR A . n A 1 119 ALA 119 98 98 ALA ALA A . n A 1 120 ILE 120 99 99 ILE ILE A . n A 1 121 LYS 121 100 100 LYS LYS A . n A 1 122 LYS 122 101 101 LYS LYS A . n A 1 123 LEU 123 102 102 LEU LEU A . n A 1 124 ARG 124 103 103 ARG ARG A . n A 1 125 ASN 125 104 104 ASN ASN A . n A 1 126 HIS 126 105 105 HIS HIS A . n A 1 127 CYS 127 106 106 CYS CYS A . n A 1 128 VAL 128 107 107 VAL VAL A . n A 1 129 ALA 129 108 108 ALA ALA A . n A 1 130 HIS 130 109 109 HIS HIS A . n A 1 131 VAL 131 110 110 VAL VAL A . n A 1 132 SER 132 111 111 SER SER A . n A 1 133 ASP 133 112 112 ASP ASP A . n A 1 134 LYS 134 113 113 LYS LYS A . n A 1 135 SER 135 114 114 SER SER A . n A 1 136 LYS 136 115 115 LYS LYS A . n A 1 137 TYR 137 116 116 TYR TYR A . n A 1 138 LEU 138 117 117 LEU LEU A . n A 1 139 LYS 139 118 118 LYS LYS A . n A 1 140 PRO 140 119 119 PRO PRO A . n A 1 141 ALA 141 120 120 ALA ALA A . n A 1 142 GLU 142 121 121 GLU GLU A . n A 1 143 VAL 143 122 122 VAL VAL A . n A 1 144 GLN 144 123 123 GLN GLN A . n A 1 145 GLU 145 124 124 GLU GLU A . n A 1 146 GLU 146 125 125 GLU GLU A . n A 1 147 ILE 147 126 126 ILE ILE A . n A 1 148 ILE 148 127 127 ILE ILE A . n A 1 149 LYS 149 128 128 LYS LYS A . n A 1 150 MSE 150 129 129 MSE MSE A . n A 1 151 PHE 151 130 130 PHE PHE A . n A 1 152 ASP 152 131 131 ASP ASP A . n A 1 153 GLY 153 132 132 GLY GLY A . n A 1 154 ASN 154 133 133 ASN ASN A . n A 1 155 PHE 155 134 134 PHE PHE A . n A 1 156 ALA 156 135 135 ALA ALA A . n A 1 157 ASP 157 136 136 ASP ASP A . n A 1 158 GLU 158 137 137 GLU GLU A . n A 1 159 PHE 159 138 138 PHE PHE A . n A 1 160 LEU 160 139 139 LEU LEU A . n A 1 161 ASP 161 140 140 ASP ASP A . n A 1 162 TRP 162 141 141 TRP TRP A . n A 1 163 ILE 163 142 142 ILE ILE A . n A 1 164 CYS 164 143 143 CYS CYS A . n A 1 165 PRO 165 144 144 PRO PRO A . n A 1 166 ASP 166 145 145 ASP ASP A . n A 1 167 ASN 167 146 146 ASN ASN A . n A 1 168 ILE 168 147 147 ILE ILE A . n A 1 169 SER 169 148 148 SER SER A . n A 1 170 THR 170 149 149 THR THR A . n A 1 171 THR 171 150 150 THR THR A . n A 1 172 ASP 172 151 151 ASP ASP A . n A 1 173 LYS 173 152 152 LYS LYS A . n A 1 174 SER 174 153 153 SER SER A . n A 1 175 GLU 175 154 154 GLU GLU A . n A 1 176 SER 176 155 155 SER SER A . n A 1 177 LEU 177 156 156 LEU LEU A . n A 1 178 VAL 178 157 157 VAL VAL A . n A 1 179 GLY 179 158 158 GLY GLY A . n A 1 180 VAL 180 159 159 VAL VAL A . n A 1 181 ILE 181 160 160 ILE ILE A . n A 1 182 GLU 182 161 161 GLU GLU A . n A 1 183 LEU 183 162 162 LEU LEU A . n A 1 184 LEU 184 163 163 LEU LEU A . n A 1 185 ARG 185 164 164 ARG ARG A . n A 1 186 ASP 186 165 165 ASP ASP A . n A 1 187 ALA 187 166 166 ALA ALA A . n A 1 188 VAL 188 167 167 VAL VAL A . n A 1 189 SER 189 168 168 SER SER A . n A 1 190 ALA 190 169 169 ALA ALA A . n A 1 191 LYS 191 170 ? ? ? A . n A 1 192 LEU 192 171 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 172 1 HOH HOH A . B 2 HOH 2 173 2 HOH HOH A . B 2 HOH 3 174 3 HOH HOH A . B 2 HOH 4 175 4 HOH HOH A . B 2 HOH 5 176 5 HOH HOH A . B 2 HOH 6 177 6 HOH HOH A . B 2 HOH 7 178 7 HOH HOH A . B 2 HOH 8 179 8 HOH HOH A . B 2 HOH 9 180 9 HOH HOH A . B 2 HOH 10 181 10 HOH HOH A . B 2 HOH 11 182 11 HOH HOH A . B 2 HOH 12 183 12 HOH HOH A . B 2 HOH 13 184 13 HOH HOH A . B 2 HOH 14 185 14 HOH HOH A . B 2 HOH 15 186 15 HOH HOH A . B 2 HOH 16 187 16 HOH HOH A . B 2 HOH 17 188 17 HOH HOH A . B 2 HOH 18 189 18 HOH HOH A . B 2 HOH 19 190 19 HOH HOH A . B 2 HOH 20 191 20 HOH HOH A . B 2 HOH 21 192 21 HOH HOH A . B 2 HOH 22 193 22 HOH HOH A . B 2 HOH 23 194 23 HOH HOH A . B 2 HOH 24 195 24 HOH HOH A . B 2 HOH 25 196 26 HOH HOH A . B 2 HOH 26 197 27 HOH HOH A . B 2 HOH 27 198 28 HOH HOH A . B 2 HOH 28 199 29 HOH HOH A . B 2 HOH 29 200 31 HOH HOH A . B 2 HOH 30 201 32 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 24 A MSE 3 ? MET SELENOMETHIONINE 2 A MSE 150 A MSE 129 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3040 ? 1 MORE -16 ? 1 'SSA (A^2)' 16700 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 42.7550000000 0.0000000000 -1.0000000000 0.0000000000 74.0538322776 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-02-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 14.2965 _pdbx_refine_tls.origin_y 29.3796 _pdbx_refine_tls.origin_z 15.5965 _pdbx_refine_tls.T[1][1] -0.1133 _pdbx_refine_tls.T[2][2] 0.2441 _pdbx_refine_tls.T[3][3] 0.1122 _pdbx_refine_tls.T[1][2] 0.0422 _pdbx_refine_tls.T[1][3] -0.0720 _pdbx_refine_tls.T[2][3] -0.0851 _pdbx_refine_tls.L[1][1] 3.2536 _pdbx_refine_tls.L[2][2] 5.3413 _pdbx_refine_tls.L[3][3] 4.3897 _pdbx_refine_tls.L[1][2] -0.2580 _pdbx_refine_tls.L[1][3] -0.7732 _pdbx_refine_tls.L[2][3] 0.8459 _pdbx_refine_tls.S[1][1] 0.1190 _pdbx_refine_tls.S[2][2] -0.1323 _pdbx_refine_tls.S[3][3] 0.0267 _pdbx_refine_tls.S[1][2] 0.6913 _pdbx_refine_tls.S[1][3] -0.2238 _pdbx_refine_tls.S[2][3] 0.5678 _pdbx_refine_tls.S[2][1] 0.0881 _pdbx_refine_tls.S[3][1] 0.2805 _pdbx_refine_tls.S[3][2] -0.4891 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 169 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 1 A 201 all ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.15 2009/03/31 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data processing' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHENIX 1.4_151 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 SCALA . ? ? ? ? 'data scaling' ? ? ? 7 PHENIX ? ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 73 ? ? -74.52 29.63 2 1 PRO A 80 ? ? -42.27 -9.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -20 ? A MSE 1 2 1 Y 1 A GLY -19 ? A GLY 2 3 1 Y 1 A SER -18 ? A SER 3 4 1 Y 1 A SER -17 ? A SER 4 5 1 Y 1 A HIS -16 ? A HIS 5 6 1 Y 1 A HIS -15 ? A HIS 6 7 1 Y 1 A HIS -14 ? A HIS 7 8 1 Y 1 A HIS -13 ? A HIS 8 9 1 Y 1 A HIS -12 ? A HIS 9 10 1 Y 1 A HIS -11 ? A HIS 10 11 1 Y 1 A SER -10 ? A SER 11 12 1 Y 1 A SER -9 ? A SER 12 13 1 Y 1 A GLY -8 ? A GLY 13 14 1 Y 1 A ARG -7 ? A ARG 14 15 1 Y 1 A GLU -6 ? A GLU 15 16 1 Y 1 A ASN -5 ? A ASN 16 17 1 Y 1 A LEU -4 ? A LEU 17 18 1 Y 1 A TYR -3 ? A TYR 18 19 1 Y 1 A PHE -2 ? A PHE 19 20 1 Y 1 A GLN -1 ? A GLN 20 21 1 Y 1 A PHE 75 ? A PHE 96 22 1 Y 1 A GLN 76 ? A GLN 97 23 1 Y 1 A ALA 77 ? A ALA 98 24 1 Y 1 A LEU 78 ? A LEU 99 25 1 Y 1 A LYS 170 ? A LYS 191 26 1 Y 1 A LEU 171 ? A LEU 192 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #