data_3K0K # _entry.id 3K0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3K0K RCSB RCSB055393 WWPDB D_1000055393 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3K05 . unspecified PDB 3K0H . unspecified # _pdbx_database_status.entry_id 3K0K _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-24 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Campbell, S.J.' 1 'Edwards, R.A.' 2 'Glover, J.N.' 3 # _citation.id primary _citation.title 'Comparison of the Structures and Peptide Binding Specificities of the BRCT Domains of MDC1 and BRCA1' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 167 _citation.page_last 176 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20159462 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.12.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Campbell, S.J.' 1 primary 'Edwards, R.A.' 2 primary 'Glover, J.N.' 3 # _cell.length_a 114.422 _cell.length_b 114.422 _cell.length_c 123.005 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3K0K _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 3K0K _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Breast cancer type 1 susceptibility protein' 24662.434 1 ? ? 'BRCT Domain (UNP residues 1646 to 1859)' ? 2 polymer syn 'phospho peptide pSPTF-COOH' 530.464 1 ? ? ? ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RING finger protein 53' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIK ERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGV HPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; ;MVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIK ERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGV HPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; A ? 2 'polypeptide(L)' no yes '(SEP)PTF' SPTF B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 ASN n 1 4 LYS n 1 5 ARG n 1 6 MET n 1 7 SER n 1 8 MET n 1 9 VAL n 1 10 VAL n 1 11 SER n 1 12 GLY n 1 13 LEU n 1 14 THR n 1 15 PRO n 1 16 GLU n 1 17 GLU n 1 18 PHE n 1 19 MET n 1 20 LEU n 1 21 VAL n 1 22 TYR n 1 23 LYS n 1 24 PHE n 1 25 ALA n 1 26 ARG n 1 27 LYS n 1 28 HIS n 1 29 HIS n 1 30 ILE n 1 31 THR n 1 32 LEU n 1 33 THR n 1 34 ASN n 1 35 LEU n 1 36 ILE n 1 37 THR n 1 38 GLU n 1 39 GLU n 1 40 THR n 1 41 THR n 1 42 HIS n 1 43 VAL n 1 44 VAL n 1 45 MET n 1 46 LYS n 1 47 THR n 1 48 ASP n 1 49 ALA n 1 50 GLU n 1 51 PHE n 1 52 VAL n 1 53 CYS n 1 54 GLU n 1 55 ARG n 1 56 THR n 1 57 LEU n 1 58 LYS n 1 59 TYR n 1 60 PHE n 1 61 LEU n 1 62 GLY n 1 63 ILE n 1 64 ALA n 1 65 GLY n 1 66 GLY n 1 67 LYS n 1 68 TRP n 1 69 VAL n 1 70 VAL n 1 71 SER n 1 72 TYR n 1 73 PHE n 1 74 TRP n 1 75 VAL n 1 76 THR n 1 77 GLN n 1 78 SER n 1 79 ILE n 1 80 LYS n 1 81 GLU n 1 82 ARG n 1 83 LYS n 1 84 MET n 1 85 LEU n 1 86 ASN n 1 87 GLU n 1 88 HIS n 1 89 ASP n 1 90 PHE n 1 91 GLU n 1 92 VAL n 1 93 ARG n 1 94 GLY n 1 95 ASP n 1 96 VAL n 1 97 VAL n 1 98 ASN n 1 99 GLY n 1 100 ARG n 1 101 ASN n 1 102 HIS n 1 103 GLN n 1 104 GLY n 1 105 PRO n 1 106 LYS n 1 107 ARG n 1 108 ALA n 1 109 ARG n 1 110 GLU n 1 111 SER n 1 112 GLN n 1 113 ASP n 1 114 ARG n 1 115 LYS n 1 116 ILE n 1 117 PHE n 1 118 ARG n 1 119 GLY n 1 120 LEU n 1 121 GLU n 1 122 ILE n 1 123 CYS n 1 124 CYS n 1 125 TYR n 1 126 GLY n 1 127 PRO n 1 128 PHE n 1 129 THR n 1 130 ASN n 1 131 MET n 1 132 PRO n 1 133 THR n 1 134 ASP n 1 135 GLN n 1 136 LEU n 1 137 GLU n 1 138 TRP n 1 139 MET n 1 140 VAL n 1 141 GLN n 1 142 LEU n 1 143 CYS n 1 144 GLY n 1 145 ALA n 1 146 SER n 1 147 VAL n 1 148 VAL n 1 149 LYS n 1 150 GLU n 1 151 LEU n 1 152 SER n 1 153 SER n 1 154 PHE n 1 155 THR n 1 156 LEU n 1 157 GLY n 1 158 THR n 1 159 GLY n 1 160 VAL n 1 161 HIS n 1 162 PRO n 1 163 ILE n 1 164 VAL n 1 165 VAL n 1 166 VAL n 1 167 GLN n 1 168 PRO n 1 169 ASP n 1 170 ALA n 1 171 TRP n 1 172 THR n 1 173 GLU n 1 174 ASP n 1 175 ASN n 1 176 GLY n 1 177 PHE n 1 178 HIS n 1 179 ALA n 1 180 ILE n 1 181 GLY n 1 182 GLN n 1 183 MET n 1 184 CYS n 1 185 GLU n 1 186 ALA n 1 187 PRO n 1 188 VAL n 1 189 VAL n 1 190 THR n 1 191 ARG n 1 192 GLU n 1 193 TRP n 1 194 VAL n 1 195 LEU n 1 196 ASP n 1 197 SER n 1 198 VAL n 1 199 ALA n 1 200 LEU n 1 201 TYR n 1 202 GLN n 1 203 CYS n 1 204 GLN n 1 205 GLU n 1 206 LEU n 1 207 ASP n 1 208 THR n 1 209 TYR n 1 210 LEU n 1 211 ILE n 1 212 PRO n 1 213 GLN n 1 214 ILE n 1 215 PRO n 2 1 SEP n 2 2 PRO n 2 3 THR n 2 4 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRCA1, RNF53' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pLM1-CD6 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans in the protein Abraxas/CCDC98. The peptide is chemically synthesized.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP BRCA1_HUMAN P38398 1 ;VNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKE RKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVH PIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP ; 1646 ? 2 PDB 3K0K 3K0K 2 SPTF 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K0K A 2 ? 215 ? P38398 1646 ? 1859 ? 1646 1859 2 2 3K0K B 1 ? 4 ? 3K0K 1 ? 4 ? 1 4 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3K0K _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P38398 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 1645 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3K0K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.64 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 73.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'Li2SO4, Tris-HCl, NiCl2, pH 7.3, VAPOR DIFFUSION, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2008-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator DCM _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_wavelength_list 0.97934 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 # _reflns.entry_id 3K0K _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 50.000 _reflns.number_obs 13551 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_netI_over_sigmaI 12.500 _reflns.pdbx_chi_squared 0.870 _reflns.pdbx_redundancy 19.200 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.70 2.80 ? ? ? 0.557 ? ? 0.610 7.70 ? 1259 94.00 1 1 2.80 2.91 ? ? ? 0.416 ? ? 0.615 14.60 ? 1307 99.70 2 1 2.91 3.04 ? ? ? 0.271 ? ? 0.648 20.10 ? 1332 100.00 3 1 3.04 3.20 ? ? ? 0.180 ? ? 0.714 21.80 ? 1337 100.00 4 1 3.20 3.40 ? ? ? 0.126 ? ? 0.811 21.90 ? 1330 100.00 5 1 3.40 3.66 ? ? ? 0.084 ? ? 0.926 21.70 ? 1355 100.00 6 1 3.66 4.03 ? ? ? 0.070 ? ? 0.892 21.60 ? 1351 100.00 7 1 4.03 4.62 ? ? ? 0.067 ? ? 1.084 21.20 ? 1371 100.00 8 1 4.62 5.81 ? ? ? 0.049 ? ? 1.053 21.00 ? 1403 100.00 9 1 5.81 50.00 ? ? ? 0.034 ? ? 1.057 19.30 ? 1506 99.50 10 1 # _refine.entry_id 3K0K _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 35.830 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.400 _refine.ls_number_reflns_obs 13512 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.261 _refine.ls_R_factor_R_work 0.259 _refine.ls_wR_factor_R_work 0.263 _refine.ls_R_factor_R_free 0.299 _refine.ls_wR_factor_R_free 0.295 _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 667 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 48.285 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.200 _refine.aniso_B[2][2] -0.200 _refine.aniso_B[3][3] 0.310 _refine.aniso_B[1][2] -0.100 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.correlation_coeff_Fo_to_Fc_free 0.898 _refine.overall_SU_R_Cruickshank_DPI 0.391 _refine.overall_SU_R_free 0.305 _refine.pdbx_overall_ESU_R 0.391 _refine.pdbx_overall_ESU_R_Free 0.305 _refine.overall_SU_ML 0.262 _refine.overall_SU_B 25.623 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.767 _refine.B_iso_max 81.40 _refine.B_iso_min 28.96 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1731 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 1745 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 35.830 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1785 0.006 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2424 1.035 1.944 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 215 5.867 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 84 35.462 23.690 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 307 16.468 15.049 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 12.654 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 268 0.067 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1349 0.004 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1076 0.343 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1756 0.649 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 709 0.844 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 668 1.409 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.700 _refine_ls_shell.d_res_low 2.770 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 92.290 _refine_ls_shell.number_reflns_R_work 850 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.330 _refine_ls_shell.R_factor_R_free 0.435 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 898 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3K0K _struct.title 'Crystal Structure of BRCA1 BRCT in complex with a minimal recognition tetrapeptide with a free carboxy C-terminus.' _struct.pdbx_descriptor 'Breast cancer type 1 susceptibility protein, phospho peptide pSPTF-COOH' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K0K _struct_keywords.text ;BRCA1, BRCT domain, DNA damage response, phospho peptide interactions, Abraxas, Alternative initiation, Cell cycle, Disease mutation, DNA damage, DNA repair, DNA-binding, Fatty acid biosynthesis, Ligase, Lipid synthesis, Metal-binding, Nucleus, Phosphoprotein, Tumor suppressor, Ubl conjugation pathway, Zinc-finger, PROTEIN BINDING ; _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details 'biological unit is the same as asym.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 14 ? HIS A 29 ? THR A 1658 HIS A 1673 1 ? 16 HELX_P HELX_P2 2 THR A 56 ? GLY A 65 ? THR A 1700 GLY A 1709 1 ? 10 HELX_P HELX_P3 3 TYR A 72 ? LYS A 80 ? TYR A 1716 LYS A 1724 1 ? 9 HELX_P HELX_P4 4 ASN A 86 ? GLU A 91 ? ASN A 1730 GLU A 1735 5 ? 6 HELX_P HELX_P5 5 GLN A 103 ? GLU A 110 ? GLN A 1747 GLU A 1754 1 ? 8 HELX_P HELX_P6 6 PRO A 132 ? CYS A 143 ? PRO A 1776 CYS A 1787 1 ? 12 HELX_P HELX_P7 7 GLU A 150 ? PHE A 154 ? GLU A 1794 PHE A 1798 5 ? 5 HELX_P HELX_P8 8 GLN A 167 ? TRP A 171 ? GLN A 1811 TRP A 1815 5 ? 5 HELX_P HELX_P9 9 ARG A 191 ? TYR A 201 ? ARG A 1835 TYR A 1845 1 ? 11 HELX_P HELX_P10 10 GLU A 205 ? TYR A 209 ? GLU A 1849 TYR A 1853 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B SEP 1 C ? ? ? 1_555 B PRO 2 N ? ? B SEP 1 B PRO 2 1_555 ? ? ? ? ? ? ? 1.336 ? metalc1 metalc ? ? A HIS 161 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 1805 A NI 1 1_555 ? ? ? ? ? ? ? 2.032 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 31 ? LEU A 32 ? THR A 1675 LEU A 1676 A 2 SER A 7 ? SER A 11 ? SER A 1651 SER A 1655 A 3 HIS A 42 ? MET A 45 ? HIS A 1686 MET A 1689 A 4 TRP A 68 ? SER A 71 ? TRP A 1712 SER A 1715 B 1 VAL A 52 ? CYS A 53 ? VAL A 1696 CYS A 1697 B 2 GLY A 94 ? ASP A 95 ? GLY A 1738 ASP A 1739 C 1 SER A 146 ? VAL A 147 ? SER A 1790 VAL A 1791 C 2 LEU A 120 ? CYS A 124 ? LEU A 1764 CYS A 1768 C 3 HIS A 161 ? VAL A 166 ? HIS A 1805 VAL A 1810 C 4 VAL A 188 ? THR A 190 ? VAL A 1832 THR A 1834 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 31 ? O THR A 1675 N MET A 8 ? N MET A 1652 A 2 3 N VAL A 9 ? N VAL A 1653 O VAL A 44 ? O VAL A 1688 A 3 4 N VAL A 43 ? N VAL A 1687 O TRP A 68 ? O TRP A 1712 B 1 2 N CYS A 53 ? N CYS A 1697 O GLY A 94 ? O GLY A 1738 C 1 2 O SER A 146 ? O SER A 1790 N ILE A 122 ? N ILE A 1766 C 2 3 N CYS A 123 ? N CYS A 1767 O ILE A 163 ? O ILE A 1807 C 3 4 N VAL A 166 ? N VAL A 1810 O VAL A 189 ? O VAL A 1833 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CL B 5' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE NI A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 SEP B 1 ? SEP B 1 . ? 1_555 ? 2 AC2 2 HIS A 29 ? HIS A 1673 . ? 5_554 ? 3 AC2 2 HIS A 161 ? HIS A 1805 . ? 1_555 ? # _atom_sites.entry_id 3K0K _atom_sites.fract_transf_matrix[1][1] 0.008740 _atom_sites.fract_transf_matrix[1][2] 0.005046 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010092 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008130 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1645 ? ? ? A . n A 1 2 VAL 2 1646 ? ? ? A . n A 1 3 ASN 3 1647 ? ? ? A . n A 1 4 LYS 4 1648 ? ? ? A . n A 1 5 ARG 5 1649 1649 ARG ARG A . n A 1 6 MET 6 1650 1650 MET MET A . n A 1 7 SER 7 1651 1651 SER SER A . n A 1 8 MET 8 1652 1652 MET MET A . n A 1 9 VAL 9 1653 1653 VAL VAL A . n A 1 10 VAL 10 1654 1654 VAL VAL A . n A 1 11 SER 11 1655 1655 SER SER A . n A 1 12 GLY 12 1656 1656 GLY GLY A . n A 1 13 LEU 13 1657 1657 LEU LEU A . n A 1 14 THR 14 1658 1658 THR THR A . n A 1 15 PRO 15 1659 1659 PRO PRO A . n A 1 16 GLU 16 1660 1660 GLU GLU A . n A 1 17 GLU 17 1661 1661 GLU GLU A . n A 1 18 PHE 18 1662 1662 PHE PHE A . n A 1 19 MET 19 1663 1663 MET MET A . n A 1 20 LEU 20 1664 1664 LEU LEU A . n A 1 21 VAL 21 1665 1665 VAL VAL A . n A 1 22 TYR 22 1666 1666 TYR TYR A . n A 1 23 LYS 23 1667 1667 LYS LYS A . n A 1 24 PHE 24 1668 1668 PHE PHE A . n A 1 25 ALA 25 1669 1669 ALA ALA A . n A 1 26 ARG 26 1670 1670 ARG ARG A . n A 1 27 LYS 27 1671 1671 LYS LYS A . n A 1 28 HIS 28 1672 1672 HIS HIS A . n A 1 29 HIS 29 1673 1673 HIS HIS A . n A 1 30 ILE 30 1674 1674 ILE ILE A . n A 1 31 THR 31 1675 1675 THR THR A . n A 1 32 LEU 32 1676 1676 LEU LEU A . n A 1 33 THR 33 1677 1677 THR THR A . n A 1 34 ASN 34 1678 1678 ASN ASN A . n A 1 35 LEU 35 1679 1679 LEU LEU A . n A 1 36 ILE 36 1680 1680 ILE ILE A . n A 1 37 THR 37 1681 1681 THR THR A . n A 1 38 GLU 38 1682 1682 GLU GLU A . n A 1 39 GLU 39 1683 1683 GLU GLU A . n A 1 40 THR 40 1684 1684 THR THR A . n A 1 41 THR 41 1685 1685 THR THR A . n A 1 42 HIS 42 1686 1686 HIS HIS A . n A 1 43 VAL 43 1687 1687 VAL VAL A . n A 1 44 VAL 44 1688 1688 VAL VAL A . n A 1 45 MET 45 1689 1689 MET MET A . n A 1 46 LYS 46 1690 1690 LYS LYS A . n A 1 47 THR 47 1691 1691 THR THR A . n A 1 48 ASP 48 1692 1692 ASP ASP A . n A 1 49 ALA 49 1693 1693 ALA ALA A . n A 1 50 GLU 50 1694 1694 GLU GLU A . n A 1 51 PHE 51 1695 1695 PHE PHE A . n A 1 52 VAL 52 1696 1696 VAL VAL A . n A 1 53 CYS 53 1697 1697 CYS CYS A . n A 1 54 GLU 54 1698 1698 GLU GLU A . n A 1 55 ARG 55 1699 1699 ARG ARG A . n A 1 56 THR 56 1700 1700 THR THR A . n A 1 57 LEU 57 1701 1701 LEU LEU A . n A 1 58 LYS 58 1702 1702 LYS LYS A . n A 1 59 TYR 59 1703 1703 TYR TYR A . n A 1 60 PHE 60 1704 1704 PHE PHE A . n A 1 61 LEU 61 1705 1705 LEU LEU A . n A 1 62 GLY 62 1706 1706 GLY GLY A . n A 1 63 ILE 63 1707 1707 ILE ILE A . n A 1 64 ALA 64 1708 1708 ALA ALA A . n A 1 65 GLY 65 1709 1709 GLY GLY A . n A 1 66 GLY 66 1710 1710 GLY GLY A . n A 1 67 LYS 67 1711 1711 LYS LYS A . n A 1 68 TRP 68 1712 1712 TRP TRP A . n A 1 69 VAL 69 1713 1713 VAL VAL A . n A 1 70 VAL 70 1714 1714 VAL VAL A . n A 1 71 SER 71 1715 1715 SER SER A . n A 1 72 TYR 72 1716 1716 TYR TYR A . n A 1 73 PHE 73 1717 1717 PHE PHE A . n A 1 74 TRP 74 1718 1718 TRP TRP A . n A 1 75 VAL 75 1719 1719 VAL VAL A . n A 1 76 THR 76 1720 1720 THR THR A . n A 1 77 GLN 77 1721 1721 GLN GLN A . n A 1 78 SER 78 1722 1722 SER SER A . n A 1 79 ILE 79 1723 1723 ILE ILE A . n A 1 80 LYS 80 1724 1724 LYS LYS A . n A 1 81 GLU 81 1725 1725 GLU GLU A . n A 1 82 ARG 82 1726 1726 ARG ARG A . n A 1 83 LYS 83 1727 1727 LYS LYS A . n A 1 84 MET 84 1728 1728 MET MET A . n A 1 85 LEU 85 1729 1729 LEU LEU A . n A 1 86 ASN 86 1730 1730 ASN ASN A . n A 1 87 GLU 87 1731 1731 GLU GLU A . n A 1 88 HIS 88 1732 1732 HIS HIS A . n A 1 89 ASP 89 1733 1733 ASP ASP A . n A 1 90 PHE 90 1734 1734 PHE PHE A . n A 1 91 GLU 91 1735 1735 GLU GLU A . n A 1 92 VAL 92 1736 1736 VAL VAL A . n A 1 93 ARG 93 1737 1737 ARG ARG A . n A 1 94 GLY 94 1738 1738 GLY GLY A . n A 1 95 ASP 95 1739 1739 ASP ASP A . n A 1 96 VAL 96 1740 1740 VAL VAL A . n A 1 97 VAL 97 1741 1741 VAL VAL A . n A 1 98 ASN 98 1742 1742 ASN ASN A . n A 1 99 GLY 99 1743 1743 GLY GLY A . n A 1 100 ARG 100 1744 1744 ARG ARG A . n A 1 101 ASN 101 1745 1745 ASN ASN A . n A 1 102 HIS 102 1746 1746 HIS HIS A . n A 1 103 GLN 103 1747 1747 GLN GLN A . n A 1 104 GLY 104 1748 1748 GLY GLY A . n A 1 105 PRO 105 1749 1749 PRO PRO A . n A 1 106 LYS 106 1750 1750 LYS LYS A . n A 1 107 ARG 107 1751 1751 ARG ARG A . n A 1 108 ALA 108 1752 1752 ALA ALA A . n A 1 109 ARG 109 1753 1753 ARG ARG A . n A 1 110 GLU 110 1754 1754 GLU GLU A . n A 1 111 SER 111 1755 1755 SER SER A . n A 1 112 GLN 112 1756 1756 GLN GLN A . n A 1 113 ASP 113 1757 1757 ASP ASP A . n A 1 114 ARG 114 1758 1758 ARG ARG A . n A 1 115 LYS 115 1759 1759 LYS LYS A . n A 1 116 ILE 116 1760 1760 ILE ILE A . n A 1 117 PHE 117 1761 1761 PHE PHE A . n A 1 118 ARG 118 1762 1762 ARG ARG A . n A 1 119 GLY 119 1763 1763 GLY GLY A . n A 1 120 LEU 120 1764 1764 LEU LEU A . n A 1 121 GLU 121 1765 1765 GLU GLU A . n A 1 122 ILE 122 1766 1766 ILE ILE A . n A 1 123 CYS 123 1767 1767 CYS CYS A . n A 1 124 CYS 124 1768 1768 CYS CYS A . n A 1 125 TYR 125 1769 1769 TYR TYR A . n A 1 126 GLY 126 1770 1770 GLY GLY A . n A 1 127 PRO 127 1771 1771 PRO PRO A . n A 1 128 PHE 128 1772 1772 PHE PHE A . n A 1 129 THR 129 1773 1773 THR THR A . n A 1 130 ASN 130 1774 1774 ASN ASN A . n A 1 131 MET 131 1775 1775 MET MET A . n A 1 132 PRO 132 1776 1776 PRO PRO A . n A 1 133 THR 133 1777 1777 THR THR A . n A 1 134 ASP 134 1778 1778 ASP ASP A . n A 1 135 GLN 135 1779 1779 GLN GLN A . n A 1 136 LEU 136 1780 1780 LEU LEU A . n A 1 137 GLU 137 1781 1781 GLU GLU A . n A 1 138 TRP 138 1782 1782 TRP TRP A . n A 1 139 MET 139 1783 1783 MET MET A . n A 1 140 VAL 140 1784 1784 VAL VAL A . n A 1 141 GLN 141 1785 1785 GLN GLN A . n A 1 142 LEU 142 1786 1786 LEU LEU A . n A 1 143 CYS 143 1787 1787 CYS CYS A . n A 1 144 GLY 144 1788 1788 GLY GLY A . n A 1 145 ALA 145 1789 1789 ALA ALA A . n A 1 146 SER 146 1790 1790 SER SER A . n A 1 147 VAL 147 1791 1791 VAL VAL A . n A 1 148 VAL 148 1792 1792 VAL VAL A . n A 1 149 LYS 149 1793 1793 LYS LYS A . n A 1 150 GLU 150 1794 1794 GLU GLU A . n A 1 151 LEU 151 1795 1795 LEU LEU A . n A 1 152 SER 152 1796 1796 SER SER A . n A 1 153 SER 153 1797 1797 SER SER A . n A 1 154 PHE 154 1798 1798 PHE PHE A . n A 1 155 THR 155 1799 1799 THR THR A . n A 1 156 LEU 156 1800 1800 LEU LEU A . n A 1 157 GLY 157 1801 1801 GLY GLY A . n A 1 158 THR 158 1802 1802 THR THR A . n A 1 159 GLY 159 1803 1803 GLY GLY A . n A 1 160 VAL 160 1804 1804 VAL VAL A . n A 1 161 HIS 161 1805 1805 HIS HIS A . n A 1 162 PRO 162 1806 1806 PRO PRO A . n A 1 163 ILE 163 1807 1807 ILE ILE A . n A 1 164 VAL 164 1808 1808 VAL VAL A . n A 1 165 VAL 165 1809 1809 VAL VAL A . n A 1 166 VAL 166 1810 1810 VAL VAL A . n A 1 167 GLN 167 1811 1811 GLN GLN A . n A 1 168 PRO 168 1812 1812 PRO PRO A . n A 1 169 ASP 169 1813 1813 ASP ASP A . n A 1 170 ALA 170 1814 1814 ALA ALA A . n A 1 171 TRP 171 1815 1815 TRP TRP A . n A 1 172 THR 172 1816 1816 THR THR A . n A 1 173 GLU 173 1817 1817 GLU GLU A . n A 1 174 ASP 174 1818 1818 ASP ASP A . n A 1 175 ASN 175 1819 1819 ASN ASN A . n A 1 176 GLY 176 1820 1820 GLY GLY A . n A 1 177 PHE 177 1821 1821 PHE PHE A . n A 1 178 HIS 178 1822 1822 HIS HIS A . n A 1 179 ALA 179 1823 1823 ALA ALA A . n A 1 180 ILE 180 1824 1824 ILE ILE A . n A 1 181 GLY 181 1825 1825 GLY GLY A . n A 1 182 GLN 182 1826 1826 GLN GLN A . n A 1 183 MET 183 1827 1827 MET MET A . n A 1 184 CYS 184 1828 1828 CYS CYS A . n A 1 185 GLU 185 1829 1829 GLU GLU A . n A 1 186 ALA 186 1830 1830 ALA ALA A . n A 1 187 PRO 187 1831 1831 PRO PRO A . n A 1 188 VAL 188 1832 1832 VAL VAL A . n A 1 189 VAL 189 1833 1833 VAL VAL A . n A 1 190 THR 190 1834 1834 THR THR A . n A 1 191 ARG 191 1835 1835 ARG ARG A . n A 1 192 GLU 192 1836 1836 GLU GLU A . n A 1 193 TRP 193 1837 1837 TRP TRP A . n A 1 194 VAL 194 1838 1838 VAL VAL A . n A 1 195 LEU 195 1839 1839 LEU LEU A . n A 1 196 ASP 196 1840 1840 ASP ASP A . n A 1 197 SER 197 1841 1841 SER SER A . n A 1 198 VAL 198 1842 1842 VAL VAL A . n A 1 199 ALA 199 1843 1843 ALA ALA A . n A 1 200 LEU 200 1844 1844 LEU LEU A . n A 1 201 TYR 201 1845 1845 TYR TYR A . n A 1 202 GLN 202 1846 1846 GLN GLN A . n A 1 203 CYS 203 1847 1847 CYS CYS A . n A 1 204 GLN 204 1848 1848 GLN GLN A . n A 1 205 GLU 205 1849 1849 GLU GLU A . n A 1 206 LEU 206 1850 1850 LEU LEU A . n A 1 207 ASP 207 1851 1851 ASP ASP A . n A 1 208 THR 208 1852 1852 THR THR A . n A 1 209 TYR 209 1853 1853 TYR TYR A . n A 1 210 LEU 210 1854 1854 LEU LEU A . n A 1 211 ILE 211 1855 1855 ILE ILE A . n A 1 212 PRO 212 1856 1856 PRO PRO A . n A 1 213 GLN 213 1857 1857 GLN GLN A . n A 1 214 ILE 214 1858 1858 ILE ILE A . n A 1 215 PRO 215 1859 1859 PRO PRO A . n B 2 1 SEP 1 1 1 SEP SEP B . n B 2 2 PRO 2 2 2 PRO PRO B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 PHE 4 4 4 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NI 1 1 1 NI NI A . D 4 CL 1 5 1 CL CL B . E 5 HOH 1 2 2 HOH HOH A . E 5 HOH 2 3 3 HOH HOH A . E 5 HOH 3 5 5 HOH HOH A . E 5 HOH 4 7 7 HOH HOH A . E 5 HOH 5 8 8 HOH HOH A . E 5 HOH 6 9 9 HOH HOH A . E 5 HOH 7 10 10 HOH HOH A . E 5 HOH 8 11 11 HOH HOH A . E 5 HOH 9 12 12 HOH HOH A . F 5 HOH 1 6 6 HOH HOH B . F 5 HOH 2 7 1 HOH HOH B . F 5 HOH 3 8 4 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id SEP _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id SEP _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id SER _pdbx_struct_mod_residue.details PHOSPHOSERINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 960 ? 1 MORE -25 ? 1 'SSA (A^2)' 11100 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -18.7689 _pdbx_refine_tls.origin_y 48.8396 _pdbx_refine_tls.origin_z -3.8906 _pdbx_refine_tls.T[1][1] 0.0582 _pdbx_refine_tls.T[2][2] 0.4727 _pdbx_refine_tls.T[3][3] 0.0415 _pdbx_refine_tls.T[1][2] 0.0062 _pdbx_refine_tls.T[1][3] 0.0255 _pdbx_refine_tls.T[2][3] 0.1043 _pdbx_refine_tls.L[1][1] 17.2140 _pdbx_refine_tls.L[2][2] 2.8550 _pdbx_refine_tls.L[3][3] 1.5473 _pdbx_refine_tls.L[1][2] 3.5217 _pdbx_refine_tls.L[1][3] -1.9927 _pdbx_refine_tls.L[2][3] -0.7288 _pdbx_refine_tls.S[1][1] -0.1937 _pdbx_refine_tls.S[2][2] 0.1786 _pdbx_refine_tls.S[3][3] 0.0151 _pdbx_refine_tls.S[1][2] 1.8444 _pdbx_refine_tls.S[1][3] 0.0670 _pdbx_refine_tls.S[2][3] -0.1501 _pdbx_refine_tls.S[2][1] -0.3247 _pdbx_refine_tls.S[3][1] 0.2117 _pdbx_refine_tls.S[3][2] -0.2722 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1649 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 1859 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 3K0K _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 47.990 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.700 _pdbx_phasing_MR.d_res_low_rotation 37.450 _pdbx_phasing_MR.d_res_high_translation 2.700 _pdbx_phasing_MR.d_res_low_translation 37.450 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Thu Nov 13 10:53:32 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 1725 ? ? -143.99 37.49 2 1 ARG A 1726 ? ? 17.03 57.80 3 1 ASN A 1745 ? ? -150.41 65.36 4 1 SER A 1755 ? ? -176.04 50.33 5 1 ARG A 1758 ? ? -159.01 88.33 6 1 ASN A 1774 ? ? 57.54 -9.40 7 1 THR A 1799 ? ? -69.67 99.64 8 1 THR A 1802 ? ? -154.54 -37.94 9 1 ASP A 1818 ? ? -97.28 -85.55 10 1 ALA A 1843 ? ? -53.78 -73.74 11 1 GLU A 1849 ? ? -38.78 134.80 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1645 ? A MET 1 2 1 Y 1 A VAL 1646 ? A VAL 2 3 1 Y 1 A ASN 1647 ? A ASN 3 4 1 Y 1 A LYS 1648 ? A LYS 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'NICKEL (II) ION' NI 4 'CHLORIDE ION' CL 5 water HOH #