data_3K41 # _entry.id 3K41 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K41 pdb_00003k41 10.2210/pdb3k41/pdb RCSB RCSB055518 ? ? WWPDB D_1000055518 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3K42 . unspecified PDB 3K43 . unspecified # _pdbx_database_status.entry_id 3K41 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Olson, L.J.' 1 'Sun, G.' 2 'Bohnsack, R.N.' 3 'Peterson, F.C.' 4 'Dahms, N.M.' 5 'Kim, J.J.P.' 6 # _citation.id primary _citation.title 'Intermonomer interactions are essential for lysosomal enzyme binding by the cation-dependent mannose 6-phosphate receptor.' _citation.journal_abbrev Biochemistry _citation.journal_volume 49 _citation.page_first 236 _citation.page_last 246 _citation.year 2010 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19928875 _citation.pdbx_database_id_DOI 10.1021/bi901725x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Olson, L.J.' 1 ? primary 'Sun, G.' 2 ? primary 'Bohnsack, R.N.' 3 ? primary 'Peterson, F.C.' 4 ? primary 'Dahms, N.M.' 5 ? primary 'Kim, J.J.' 6 ? # _cell.length_a 53.234 _cell.length_b 77.112 _cell.length_c 79.903 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3K41 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3K41 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cation-dependent mannose-6-phosphate receptor' 18273.494 2 ? 'E19Q, K137M, N31Q, N57Q, N68Q, N87Q' 'UNP residues 29-182' ? 2 branched man ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer syn 6-O-phosphono-beta-D-mannopyranose 260.136 2 ? ? ? ? 5 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CD Man-6-P receptor, CD-MPR, 46 kDa mannose 6-phosphate receptor, MPR 46' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TEEKTCDLVGEKGKESEKQLALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGMVQDCFYLFEMDSSLACSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;TEEKTCDLVGEKGKESEKQLALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGMVQDCFYLFEMDSSLACSHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLU n 1 3 GLU n 1 4 LYS n 1 5 THR n 1 6 CYS n 1 7 ASP n 1 8 LEU n 1 9 VAL n 1 10 GLY n 1 11 GLU n 1 12 LYS n 1 13 GLY n 1 14 LYS n 1 15 GLU n 1 16 SER n 1 17 GLU n 1 18 LYS n 1 19 GLN n 1 20 LEU n 1 21 ALA n 1 22 LEU n 1 23 LEU n 1 24 LYS n 1 25 ARG n 1 26 LEU n 1 27 THR n 1 28 PRO n 1 29 LEU n 1 30 PHE n 1 31 GLN n 1 32 LYS n 1 33 SER n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 THR n 1 38 VAL n 1 39 GLY n 1 40 GLN n 1 41 SER n 1 42 PRO n 1 43 ASP n 1 44 MET n 1 45 TYR n 1 46 SER n 1 47 TYR n 1 48 VAL n 1 49 PHE n 1 50 ARG n 1 51 VAL n 1 52 CYS n 1 53 ARG n 1 54 GLU n 1 55 ALA n 1 56 GLY n 1 57 GLN n 1 58 HIS n 1 59 SER n 1 60 SER n 1 61 GLY n 1 62 ALA n 1 63 GLY n 1 64 LEU n 1 65 VAL n 1 66 GLN n 1 67 ILE n 1 68 GLN n 1 69 LYS n 1 70 SER n 1 71 ASN n 1 72 GLY n 1 73 LYS n 1 74 GLU n 1 75 THR n 1 76 VAL n 1 77 VAL n 1 78 GLY n 1 79 ARG n 1 80 PHE n 1 81 ASN n 1 82 GLU n 1 83 THR n 1 84 GLN n 1 85 ILE n 1 86 PHE n 1 87 GLN n 1 88 GLY n 1 89 SER n 1 90 ASN n 1 91 TRP n 1 92 ILE n 1 93 MET n 1 94 LEU n 1 95 ILE n 1 96 TYR n 1 97 LYS n 1 98 GLY n 1 99 GLY n 1 100 ASP n 1 101 GLU n 1 102 TYR n 1 103 ASP n 1 104 ASN n 1 105 HIS n 1 106 CYS n 1 107 GLY n 1 108 ARG n 1 109 GLU n 1 110 GLN n 1 111 ARG n 1 112 ARG n 1 113 ALA n 1 114 VAL n 1 115 VAL n 1 116 MET n 1 117 ILE n 1 118 SER n 1 119 CYS n 1 120 ASN n 1 121 ARG n 1 122 HIS n 1 123 THR n 1 124 LEU n 1 125 ALA n 1 126 ASP n 1 127 ASN n 1 128 PHE n 1 129 ASN n 1 130 PRO n 1 131 VAL n 1 132 SER n 1 133 GLU n 1 134 GLU n 1 135 ARG n 1 136 GLY n 1 137 MET n 1 138 VAL n 1 139 GLN n 1 140 ASP n 1 141 CYS n 1 142 PHE n 1 143 TYR n 1 144 LEU n 1 145 PHE n 1 146 GLU n 1 147 MET n 1 148 ASP n 1 149 SER n 1 150 SER n 1 151 LEU n 1 152 ALA n 1 153 CYS n 1 154 SER n 1 155 HIS n 1 156 HIS n 1 157 HIS n 1 158 HIS n 1 159 HIS n 1 160 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'bovine,cow,domestic cattle,domestic cow' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene M6PR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia Pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain X-33 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGAP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MPRD_BOVIN _struct_ref.pdbx_db_accession P11456 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TEEKTCDLVGEKGKESEKELALLKRLTPLFNKSFESTVGQSPDMYSYVFRVCREAGNHSSGAGLVQINKSNGKETVVGRF NETQIFNGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3K41 A 1 ? 154 ? P11456 29 ? 182 ? 1 154 2 1 3K41 B 1 ? 154 ? P11456 29 ? 182 ? 1 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K41 GLN A 19 ? UNP P11456 GLU 47 'engineered mutation' 19 1 1 3K41 GLN A 31 ? UNP P11456 ASN 59 'engineered mutation' 31 2 1 3K41 GLN A 57 ? UNP P11456 ASN 85 'engineered mutation' 57 3 1 3K41 GLN A 68 ? UNP P11456 ASN 96 'engineered mutation' 68 4 1 3K41 GLN A 87 ? UNP P11456 ASN 115 'engineered mutation' 87 5 1 3K41 MET A 137 ? UNP P11456 LYS 165 'engineered mutation' 137 6 1 3K41 HIS A 155 ? UNP P11456 ? ? 'expression tag' 155 7 1 3K41 HIS A 156 ? UNP P11456 ? ? 'expression tag' 156 8 1 3K41 HIS A 157 ? UNP P11456 ? ? 'expression tag' 157 9 1 3K41 HIS A 158 ? UNP P11456 ? ? 'expression tag' 158 10 1 3K41 HIS A 159 ? UNP P11456 ? ? 'expression tag' 159 11 1 3K41 HIS A 160 ? UNP P11456 ? ? 'expression tag' 160 12 2 3K41 GLN B 19 ? UNP P11456 GLU 47 'engineered mutation' 19 13 2 3K41 GLN B 31 ? UNP P11456 ASN 59 'engineered mutation' 31 14 2 3K41 GLN B 57 ? UNP P11456 ASN 85 'engineered mutation' 57 15 2 3K41 GLN B 68 ? UNP P11456 ASN 96 'engineered mutation' 68 16 2 3K41 GLN B 87 ? UNP P11456 ASN 115 'engineered mutation' 87 17 2 3K41 MET B 137 ? UNP P11456 LYS 165 'engineered mutation' 137 18 2 3K41 HIS B 155 ? UNP P11456 ? ? 'expression tag' 155 19 2 3K41 HIS B 156 ? UNP P11456 ? ? 'expression tag' 156 20 2 3K41 HIS B 157 ? UNP P11456 ? ? 'expression tag' 157 21 2 3K41 HIS B 158 ? UNP P11456 ? ? 'expression tag' 158 22 2 3K41 HIS B 159 ? UNP P11456 ? ? 'expression tag' 159 23 2 3K41 HIS B 160 ? UNP P11456 ? ? 'expression tag' 160 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M6D 'D-saccharide, beta linking' n 6-O-phosphono-beta-D-mannopyranose 'beta-D-mannose-6-phosphate; 6-O-phosphono-beta-D-mannose; 6-O-phosphono-D-mannose; 6-O-phosphono-mannose' 'C6 H13 O9 P' 260.136 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3K41 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;100 mM sodium cacodylate, pH 6.5;25% PEG 2000MME; 0.2M ammonium acetate; 0.025M OBG, VAPOR DIFFUSION, HANGING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 98 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2005-12-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3K41 _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 26594 _reflns.pdbx_Rmerge_I_obs 0.126 _reflns.pdbx_netI_over_sigmaI 13.000 _reflns.pdbx_chi_squared 5.316 _reflns.pdbx_redundancy 4.200 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.534 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 2.074 _reflns_shell.pdbx_redundancy 4.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2607 _reflns_shell.percent_possible_all 99.80 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3K41 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 38.56 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.200 _refine.ls_number_reflns_obs 25567 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.216 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.255 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.500 _refine.ls_number_reflns_R_free 2526 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 27.305 _refine.solvent_model_param_bsol 50.155 _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.394 _refine.aniso_B[2][2] -0.784 _refine.aniso_B[3][3] 2.178 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 1M6P' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 60.58 _refine.B_iso_min 12.09 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2340 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 110 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 2611 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 38.56 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.387 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.144 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.153 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.142 2.500 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:carbohydrate.param ? 'X-RAY DIFFRACTION' 4 m6p.par ? 'X-RAY DIFFRACTION' 5 gol.par ? 'X-RAY DIFFRACTION' # _struct.entry_id 3K41 _struct.title 'Crystal structure of sCD-MPR mutant E19Q/K137M bound to Man-6-P' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K41 _struct_keywords.pdbx_keywords 'Protein transport, sugar binding protein' _struct_keywords.text ;transport, lysosome, mannose, receptor, sugar binding, Glycoprotein, Membrane, Phosphoprotein, Transmembrane, Protein transport, sugar binding protein ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? THR A 27 ? SER A 16 THR A 27 1 ? 12 HELX_P HELX_P2 2 PRO A 28 ? PHE A 30 ? PRO A 28 PHE A 30 5 ? 3 HELX_P HELX_P3 3 HIS A 105 ? GLU A 109 ? HIS A 105 GLU A 109 5 ? 5 HELX_P HELX_P4 4 SER A 150 ? CYS A 153 ? SER A 150 CYS A 153 5 ? 4 HELX_P HELX_P5 5 GLY B 13 ? LEU B 26 ? GLY B 13 LEU B 26 1 ? 14 HELX_P HELX_P6 6 THR B 27 ? PHE B 30 ? THR B 27 PHE B 30 5 ? 4 HELX_P HELX_P7 7 HIS B 105 ? GLU B 109 ? HIS B 105 GLU B 109 5 ? 5 HELX_P HELX_P8 8 SER B 150 ? CYS B 153 ? SER B 150 CYS B 153 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 6 A CYS 52 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf2 disulf ? ? A CYS 106 SG ? ? ? 1_555 A CYS 141 SG ? ? A CYS 106 A CYS 141 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf3 disulf ? ? A CYS 119 SG ? ? ? 1_555 A CYS 153 SG ? ? A CYS 119 A CYS 153 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf4 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 52 SG ? ? B CYS 6 B CYS 52 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf5 disulf ? ? B CYS 106 SG ? ? ? 1_555 B CYS 141 SG ? ? B CYS 106 B CYS 141 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? B CYS 119 SG ? ? ? 1_555 B CYS 153 SG ? ? B CYS 119 B CYS 153 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? A ASN 81 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 81 C NAG 1 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale2 covale one ? B ASN 81 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 81 D NAG 1 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale3 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.390 ? ? covale4 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale5 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.402 ? ? covale6 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.387 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 41 A . ? SER 41 A PRO 42 A ? PRO 42 A 1 0.33 2 SER 41 B . ? SER 41 B PRO 42 B ? PRO 42 B 1 0.00 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 34 ? VAL A 38 ? PHE A 34 VAL A 38 A 2 TYR A 45 ? PHE A 49 ? TYR A 45 PHE A 49 A 3 ALA A 62 ? GLN A 68 ? ALA A 62 GLN A 68 A 4 GLU A 74 ? GLN A 87 ? GLU A 74 GLN A 87 A 5 TRP A 91 ? GLY A 98 ? TRP A 91 GLY A 98 A 6 ALA A 113 ? CYS A 119 ? ALA A 113 CYS A 119 A 7 PHE A 142 ? SER A 149 ? PHE A 142 SER A 149 A 8 ASP A 126 ? GLU A 134 ? ASP A 126 GLU A 134 B 1 PHE B 34 ? VAL B 38 ? PHE B 34 VAL B 38 B 2 TYR B 45 ? PHE B 49 ? TYR B 45 PHE B 49 B 3 ALA B 62 ? GLN B 68 ? ALA B 62 GLN B 68 B 4 GLU B 74 ? GLN B 87 ? GLU B 74 GLN B 87 B 5 TRP B 91 ? GLY B 98 ? TRP B 91 GLY B 98 B 6 ALA B 113 ? CYS B 119 ? ALA B 113 CYS B 119 B 7 PHE B 142 ? SER B 149 ? PHE B 142 SER B 149 B 8 ASP B 126 ? GLU B 134 ? ASP B 126 GLU B 134 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 38 ? N VAL A 38 O TYR A 45 ? O TYR A 45 A 2 3 N SER A 46 ? N SER A 46 O ILE A 67 ? O ILE A 67 A 3 4 N GLN A 66 ? N GLN A 66 O THR A 75 ? O THR A 75 A 4 5 N GLN A 84 ? N GLN A 84 O ILE A 95 ? O ILE A 95 A 5 6 N ILE A 92 ? N ILE A 92 O ILE A 117 ? O ILE A 117 A 6 7 N VAL A 114 ? N VAL A 114 O PHE A 145 ? O PHE A 145 A 7 8 O LEU A 144 ? O LEU A 144 N VAL A 131 ? N VAL A 131 B 1 2 N PHE B 34 ? N PHE B 34 O PHE B 49 ? O PHE B 49 B 2 3 N SER B 46 ? N SER B 46 O ILE B 67 ? O ILE B 67 B 3 4 N GLY B 63 ? N GLY B 63 O GLY B 78 ? O GLY B 78 B 4 5 N ARG B 79 ? N ARG B 79 O LYS B 97 ? O LYS B 97 B 5 6 N LEU B 94 ? N LEU B 94 O VAL B 115 ? O VAL B 115 B 6 7 N MET B 116 ? N MET B 116 O PHE B 145 ? O PHE B 145 B 7 8 O LEU B 144 ? O LEU B 144 N SER B 132 ? N SER B 132 # _atom_sites.entry_id 3K41 _atom_sites.fract_transf_matrix[1][1] 0.018785 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012968 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012515 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLY 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 LYS 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 LYS 14 14 ? ? ? A . n A 1 15 GLU 15 15 ? ? ? A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 TRP 91 91 91 TRP TRP A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 MET 93 93 93 MET MET A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 MET 137 137 137 MET MET A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 CYS 141 141 141 CYS CYS A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 CYS 153 153 153 CYS CYS A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 HIS 155 155 ? ? ? A . n A 1 156 HIS 156 156 ? ? ? A . n A 1 157 HIS 157 157 ? ? ? A . n A 1 158 HIS 158 158 ? ? ? A . n A 1 159 HIS 159 159 ? ? ? A . n A 1 160 HIS 160 160 ? ? ? A . n B 1 1 THR 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 GLU 3 3 ? ? ? B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 PHE 34 34 34 PHE PHE B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 MET 44 44 44 MET MET B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 TYR 47 47 47 TYR TYR B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 CYS 52 52 52 CYS CYS B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 GLY 56 56 56 GLY GLY B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 HIS 58 58 58 HIS HIS B . n B 1 59 SER 59 59 59 SER SER B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 GLN 66 66 66 GLN GLN B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 GLN 68 68 68 GLN GLN B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 ASN 71 71 71 ASN ASN B . n B 1 72 GLY 72 72 72 GLY GLY B . n B 1 73 LYS 73 73 73 LYS LYS B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 ARG 79 79 79 ARG ARG B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 THR 83 83 83 THR THR B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 ASN 90 90 90 ASN ASN B . n B 1 91 TRP 91 91 91 TRP TRP B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 MET 93 93 93 MET MET B . n B 1 94 LEU 94 94 94 LEU LEU B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 TYR 96 96 96 TYR TYR B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 GLU 101 101 101 GLU GLU B . n B 1 102 TYR 102 102 102 TYR TYR B . n B 1 103 ASP 103 103 103 ASP ASP B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 CYS 106 106 106 CYS CYS B . n B 1 107 GLY 107 107 107 GLY GLY B . n B 1 108 ARG 108 108 108 ARG ARG B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 GLN 110 110 110 GLN GLN B . n B 1 111 ARG 111 111 111 ARG ARG B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 MET 116 116 116 MET MET B . n B 1 117 ILE 117 117 117 ILE ILE B . n B 1 118 SER 118 118 118 SER SER B . n B 1 119 CYS 119 119 119 CYS CYS B . n B 1 120 ASN 120 120 120 ASN ASN B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 HIS 122 122 122 HIS HIS B . n B 1 123 THR 123 123 123 THR THR B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 ALA 125 125 125 ALA ALA B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 ASN 127 127 127 ASN ASN B . n B 1 128 PHE 128 128 128 PHE PHE B . n B 1 129 ASN 129 129 129 ASN ASN B . n B 1 130 PRO 130 130 130 PRO PRO B . n B 1 131 VAL 131 131 131 VAL VAL B . n B 1 132 SER 132 132 132 SER SER B . n B 1 133 GLU 133 133 133 GLU GLU B . n B 1 134 GLU 134 134 134 GLU GLU B . n B 1 135 ARG 135 135 135 ARG ARG B . n B 1 136 GLY 136 136 136 GLY GLY B . n B 1 137 MET 137 137 137 MET MET B . n B 1 138 VAL 138 138 138 VAL VAL B . n B 1 139 GLN 139 139 139 GLN GLN B . n B 1 140 ASP 140 140 140 ASP ASP B . n B 1 141 CYS 141 141 141 CYS CYS B . n B 1 142 PHE 142 142 142 PHE PHE B . n B 1 143 TYR 143 143 143 TYR TYR B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 PHE 145 145 145 PHE PHE B . n B 1 146 GLU 146 146 146 GLU GLU B . n B 1 147 MET 147 147 147 MET MET B . n B 1 148 ASP 148 148 148 ASP ASP B . n B 1 149 SER 149 149 149 SER SER B . n B 1 150 SER 150 150 150 SER SER B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 ALA 152 152 152 ALA ALA B . n B 1 153 CYS 153 153 153 CYS CYS B . n B 1 154 SER 154 154 154 SER SER B . n B 1 155 HIS 155 155 ? ? ? B . n B 1 156 HIS 156 156 ? ? ? B . n B 1 157 HIS 157 157 ? ? ? B . n B 1 158 HIS 158 158 ? ? ? B . n B 1 159 HIS 159 159 ? ? ? B . n B 1 160 HIS 160 160 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 M6D 1 500 500 M6D M6D A . F 4 M6D 1 501 501 M6D M6D B . G 5 HOH 1 161 161 HOH WAT A . G 5 HOH 2 162 162 HOH WAT A . G 5 HOH 3 163 11 HOH WAT A . G 5 HOH 4 164 14 HOH WAT A . G 5 HOH 5 165 15 HOH WAT A . G 5 HOH 6 166 17 HOH WAT A . G 5 HOH 7 167 20 HOH WAT A . G 5 HOH 8 168 21 HOH WAT A . G 5 HOH 9 169 24 HOH WAT A . G 5 HOH 10 170 170 HOH WAT A . G 5 HOH 11 171 171 HOH WAT A . G 5 HOH 12 172 27 HOH WAT A . G 5 HOH 13 173 32 HOH WAT A . G 5 HOH 14 174 174 HOH WAT A . G 5 HOH 15 175 175 HOH WAT A . G 5 HOH 16 176 176 HOH WAT A . G 5 HOH 17 177 177 HOH WAT A . G 5 HOH 18 178 33 HOH WAT A . G 5 HOH 19 179 179 HOH WAT A . G 5 HOH 20 180 37 HOH WAT A . G 5 HOH 21 181 40 HOH WAT A . G 5 HOH 22 182 44 HOH WAT A . G 5 HOH 23 183 183 HOH WAT A . G 5 HOH 24 184 184 HOH WAT A . G 5 HOH 25 185 47 HOH WAT A . G 5 HOH 26 186 48 HOH WAT A . G 5 HOH 27 187 50 HOH WAT A . G 5 HOH 28 188 51 HOH WAT A . G 5 HOH 29 189 189 HOH WAT A . G 5 HOH 30 190 56 HOH WAT A . G 5 HOH 31 191 57 HOH WAT A . G 5 HOH 32 192 58 HOH WAT A . G 5 HOH 33 193 61 HOH WAT A . G 5 HOH 34 194 62 HOH WAT A . G 5 HOH 35 195 195 HOH WAT A . G 5 HOH 36 196 70 HOH WAT A . G 5 HOH 37 197 197 HOH WAT A . G 5 HOH 38 198 198 HOH WAT A . G 5 HOH 39 199 72 HOH WAT A . G 5 HOH 40 200 200 HOH WAT A . G 5 HOH 41 201 73 HOH WAT A . G 5 HOH 42 202 74 HOH WAT A . G 5 HOH 43 203 203 HOH WAT A . G 5 HOH 44 204 204 HOH WAT A . G 5 HOH 45 205 205 HOH WAT A . G 5 HOH 46 206 76 HOH WAT A . G 5 HOH 47 207 77 HOH WAT A . G 5 HOH 48 208 79 HOH WAT A . G 5 HOH 49 209 82 HOH WAT A . G 5 HOH 50 210 83 HOH WAT A . G 5 HOH 51 211 87 HOH WAT A . G 5 HOH 52 212 88 HOH WAT A . G 5 HOH 53 213 89 HOH WAT A . G 5 HOH 54 214 91 HOH WAT A . G 5 HOH 55 215 92 HOH WAT A . G 5 HOH 56 216 101 HOH WAT A . G 5 HOH 57 217 105 HOH WAT A . G 5 HOH 58 218 106 HOH WAT A . G 5 HOH 59 219 112 HOH WAT A . G 5 HOH 60 220 114 HOH WAT A . G 5 HOH 61 221 117 HOH WAT A . G 5 HOH 62 222 119 HOH WAT A . G 5 HOH 63 223 122 HOH WAT A . G 5 HOH 64 224 124 HOH WAT A . G 5 HOH 65 225 130 HOH WAT A . G 5 HOH 66 226 134 HOH WAT A . G 5 HOH 67 227 137 HOH WAT A . G 5 HOH 68 228 150 HOH WAT A . G 5 HOH 69 229 151 HOH WAT A . G 5 HOH 70 230 2 HOH WAT A . G 5 HOH 71 231 156 HOH WAT A . G 5 HOH 72 232 157 HOH WAT A . G 5 HOH 73 233 4 HOH WAT A . G 5 HOH 74 234 6 HOH WAT A . G 5 HOH 75 235 8 HOH WAT A . H 5 HOH 1 161 9 HOH WAT B . H 5 HOH 2 162 10 HOH WAT B . H 5 HOH 3 163 163 HOH WAT B . H 5 HOH 4 164 12 HOH WAT B . H 5 HOH 5 165 13 HOH WAT B . H 5 HOH 6 166 166 HOH WAT B . H 5 HOH 7 167 167 HOH WAT B . H 5 HOH 8 168 168 HOH WAT B . H 5 HOH 9 169 169 HOH WAT B . H 5 HOH 10 170 16 HOH WAT B . H 5 HOH 11 171 18 HOH WAT B . H 5 HOH 12 172 172 HOH WAT B . H 5 HOH 13 173 173 HOH WAT B . H 5 HOH 14 174 19 HOH WAT B . H 5 HOH 15 175 22 HOH WAT B . H 5 HOH 16 176 23 HOH WAT B . H 5 HOH 17 177 26 HOH WAT B . H 5 HOH 18 178 178 HOH WAT B . H 5 HOH 19 179 28 HOH WAT B . H 5 HOH 20 180 29 HOH WAT B . H 5 HOH 21 181 34 HOH WAT B . H 5 HOH 22 182 182 HOH WAT B . H 5 HOH 23 183 36 HOH WAT B . H 5 HOH 24 184 38 HOH WAT B . H 5 HOH 25 185 185 HOH WAT B . H 5 HOH 26 186 39 HOH WAT B . H 5 HOH 27 187 187 HOH WAT B . H 5 HOH 28 188 41 HOH WAT B . H 5 HOH 29 189 42 HOH WAT B . H 5 HOH 30 190 190 HOH WAT B . H 5 HOH 31 191 43 HOH WAT B . H 5 HOH 32 192 192 HOH WAT B . H 5 HOH 33 193 193 HOH WAT B . H 5 HOH 34 194 194 HOH WAT B . H 5 HOH 35 195 45 HOH WAT B . H 5 HOH 36 196 196 HOH WAT B . H 5 HOH 37 197 46 HOH WAT B . H 5 HOH 38 198 49 HOH WAT B . H 5 HOH 39 199 199 HOH WAT B . H 5 HOH 40 200 52 HOH WAT B . H 5 HOH 41 201 53 HOH WAT B . H 5 HOH 42 202 202 HOH WAT B . H 5 HOH 43 203 54 HOH WAT B . H 5 HOH 44 204 55 HOH WAT B . H 5 HOH 45 205 59 HOH WAT B . H 5 HOH 46 206 60 HOH WAT B . H 5 HOH 47 207 63 HOH WAT B . H 5 HOH 48 208 65 HOH WAT B . H 5 HOH 49 209 67 HOH WAT B . H 5 HOH 50 210 68 HOH WAT B . H 5 HOH 51 211 69 HOH WAT B . H 5 HOH 52 212 71 HOH WAT B . H 5 HOH 53 213 75 HOH WAT B . H 5 HOH 54 214 78 HOH WAT B . H 5 HOH 55 215 80 HOH WAT B . H 5 HOH 56 216 81 HOH WAT B . H 5 HOH 57 217 84 HOH WAT B . H 5 HOH 58 218 86 HOH WAT B . H 5 HOH 59 219 90 HOH WAT B . H 5 HOH 60 220 93 HOH WAT B . H 5 HOH 61 221 95 HOH WAT B . H 5 HOH 62 222 96 HOH WAT B . H 5 HOH 63 223 103 HOH WAT B . H 5 HOH 64 224 108 HOH WAT B . H 5 HOH 65 225 113 HOH WAT B . H 5 HOH 66 226 115 HOH WAT B . H 5 HOH 67 227 116 HOH WAT B . H 5 HOH 68 228 120 HOH WAT B . H 5 HOH 69 229 121 HOH WAT B . H 5 HOH 70 230 123 HOH WAT B . H 5 HOH 71 231 125 HOH WAT B . H 5 HOH 72 232 127 HOH WAT B . H 5 HOH 73 233 131 HOH WAT B . H 5 HOH 74 234 135 HOH WAT B . H 5 HOH 75 235 138 HOH WAT B . H 5 HOH 76 236 139 HOH WAT B . H 5 HOH 77 237 140 HOH WAT B . H 5 HOH 78 238 141 HOH WAT B . H 5 HOH 79 239 64 HOH WAT B . H 5 HOH 80 240 104 HOH WAT B . H 5 HOH 81 241 155 HOH WAT B . H 5 HOH 82 242 1 HOH WAT B . H 5 HOH 83 243 3 HOH WAT B . H 5 HOH 84 244 158 HOH WAT B . H 5 HOH 85 245 5 HOH WAT B . H 5 HOH 86 246 160 HOH WAT B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 81 A ASN 81 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 81 B ASN 81 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3370 ? 1 MORE 8 ? 1 'SSA (A^2)' 14660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-10-13 6 'Structure model' 2 2 2023-09-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_ref_seq_dif 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' database_2 21 5 'Structure model' struct_ref_seq_dif 22 6 'Structure model' chem_comp_atom 23 6 'Structure model' chem_comp_bond 24 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.mon_nstd_flag' 15 4 'Structure model' '_chem_comp.name' 16 4 'Structure model' '_chem_comp.type' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 4 'Structure model' '_struct_conn.pdbx_role' 20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_ref_seq_dif.details' 27 5 'Structure model' '_chem_comp.pdbx_synonyms' 28 5 'Structure model' '_database_2.pdbx_DOI' 29 5 'Structure model' '_database_2.pdbx_database_accession' 30 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 36 ? ? -160.90 117.37 2 1 ASN A 104 ? ? -131.72 -40.60 3 1 ALA A 125 ? ? -174.42 123.91 4 1 MET A 147 ? ? -170.56 149.79 5 1 ASP B 43 ? ? -108.61 43.99 6 1 ALA B 125 ? ? -170.61 130.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 1 ? A THR 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A GLU 3 ? A GLU 3 4 1 Y 1 A GLY 10 ? A GLY 10 5 1 Y 1 A GLU 11 ? A GLU 11 6 1 Y 1 A LYS 12 ? A LYS 12 7 1 Y 1 A GLY 13 ? A GLY 13 8 1 Y 1 A LYS 14 ? A LYS 14 9 1 Y 1 A GLU 15 ? A GLU 15 10 1 Y 1 A HIS 155 ? A HIS 155 11 1 Y 1 A HIS 156 ? A HIS 156 12 1 Y 1 A HIS 157 ? A HIS 157 13 1 Y 1 A HIS 158 ? A HIS 158 14 1 Y 1 A HIS 159 ? A HIS 159 15 1 Y 1 A HIS 160 ? A HIS 160 16 1 Y 1 B THR 1 ? B THR 1 17 1 Y 1 B GLU 2 ? B GLU 2 18 1 Y 1 B GLU 3 ? B GLU 3 19 1 Y 1 B HIS 155 ? B HIS 155 20 1 Y 1 B HIS 156 ? B HIS 156 21 1 Y 1 B HIS 157 ? B HIS 157 22 1 Y 1 B HIS 158 ? B HIS 158 23 1 Y 1 B HIS 159 ? B HIS 159 24 1 Y 1 B HIS 160 ? B HIS 160 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 M6D C1 C N R 254 M6D C2 C N S 255 M6D C3 C N S 256 M6D C4 C N S 257 M6D C5 C N R 258 M6D C6 C N N 259 M6D O1 O N N 260 M6D O2 O N N 261 M6D O3 O N N 262 M6D O4 O N N 263 M6D O5 O N N 264 M6D O6 O N N 265 M6D P P N N 266 M6D O1P O N N 267 M6D O2P O N N 268 M6D O3P O N N 269 M6D H1 H N N 270 M6D H2 H N N 271 M6D H3 H N N 272 M6D H4 H N N 273 M6D H5 H N N 274 M6D H61 H N N 275 M6D H62 H N N 276 M6D HO1 H N N 277 M6D HO2 H N N 278 M6D HO3 H N N 279 M6D HO4 H N N 280 M6D HO1P H N N 281 M6D HO2P H N N 282 MAN C1 C N S 283 MAN C2 C N S 284 MAN C3 C N S 285 MAN C4 C N S 286 MAN C5 C N R 287 MAN C6 C N N 288 MAN O1 O N N 289 MAN O2 O N N 290 MAN O3 O N N 291 MAN O4 O N N 292 MAN O5 O N N 293 MAN O6 O N N 294 MAN H1 H N N 295 MAN H2 H N N 296 MAN H3 H N N 297 MAN H4 H N N 298 MAN H5 H N N 299 MAN H61 H N N 300 MAN H62 H N N 301 MAN HO1 H N N 302 MAN HO2 H N N 303 MAN HO3 H N N 304 MAN HO4 H N N 305 MAN HO6 H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 NAG C1 C N R 327 NAG C2 C N R 328 NAG C3 C N R 329 NAG C4 C N S 330 NAG C5 C N R 331 NAG C6 C N N 332 NAG C7 C N N 333 NAG C8 C N N 334 NAG N2 N N N 335 NAG O1 O N N 336 NAG O3 O N N 337 NAG O4 O N N 338 NAG O5 O N N 339 NAG O6 O N N 340 NAG O7 O N N 341 NAG H1 H N N 342 NAG H2 H N N 343 NAG H3 H N N 344 NAG H4 H N N 345 NAG H5 H N N 346 NAG H61 H N N 347 NAG H62 H N N 348 NAG H81 H N N 349 NAG H82 H N N 350 NAG H83 H N N 351 NAG HN2 H N N 352 NAG HO1 H N N 353 NAG HO3 H N N 354 NAG HO4 H N N 355 NAG HO6 H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 VAL N N N N 479 VAL CA C N S 480 VAL C C N N 481 VAL O O N N 482 VAL CB C N N 483 VAL CG1 C N N 484 VAL CG2 C N N 485 VAL OXT O N N 486 VAL H H N N 487 VAL H2 H N N 488 VAL HA H N N 489 VAL HB H N N 490 VAL HG11 H N N 491 VAL HG12 H N N 492 VAL HG13 H N N 493 VAL HG21 H N N 494 VAL HG22 H N N 495 VAL HG23 H N N 496 VAL HXT H N N 497 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 M6D C2 C1 sing N N 242 M6D O1 C1 sing N N 243 M6D C1 O5 sing N N 244 M6D C1 H1 sing N N 245 M6D O2 C2 sing N N 246 M6D C2 C3 sing N N 247 M6D C2 H2 sing N N 248 M6D O3 C3 sing N N 249 M6D C3 C4 sing N N 250 M6D C3 H3 sing N N 251 M6D C4 O4 sing N N 252 M6D C4 C5 sing N N 253 M6D C4 H4 sing N N 254 M6D O5 C5 sing N N 255 M6D C5 C6 sing N N 256 M6D C5 H5 sing N N 257 M6D C6 O6 sing N N 258 M6D C6 H61 sing N N 259 M6D C6 H62 sing N N 260 M6D O1 HO1 sing N N 261 M6D O2 HO2 sing N N 262 M6D O3 HO3 sing N N 263 M6D O4 HO4 sing N N 264 M6D O6 P sing N N 265 M6D O3P P doub N N 266 M6D P O1P sing N N 267 M6D P O2P sing N N 268 M6D O1P HO1P sing N N 269 M6D O2P HO2P sing N N 270 MAN C1 C2 sing N N 271 MAN C1 O1 sing N N 272 MAN C1 O5 sing N N 273 MAN C1 H1 sing N N 274 MAN C2 C3 sing N N 275 MAN C2 O2 sing N N 276 MAN C2 H2 sing N N 277 MAN C3 C4 sing N N 278 MAN C3 O3 sing N N 279 MAN C3 H3 sing N N 280 MAN C4 C5 sing N N 281 MAN C4 O4 sing N N 282 MAN C4 H4 sing N N 283 MAN C5 C6 sing N N 284 MAN C5 O5 sing N N 285 MAN C5 H5 sing N N 286 MAN C6 O6 sing N N 287 MAN C6 H61 sing N N 288 MAN C6 H62 sing N N 289 MAN O1 HO1 sing N N 290 MAN O2 HO2 sing N N 291 MAN O3 HO3 sing N N 292 MAN O4 HO4 sing N N 293 MAN O6 HO6 sing N N 294 MET N CA sing N N 295 MET N H sing N N 296 MET N H2 sing N N 297 MET CA C sing N N 298 MET CA CB sing N N 299 MET CA HA sing N N 300 MET C O doub N N 301 MET C OXT sing N N 302 MET CB CG sing N N 303 MET CB HB2 sing N N 304 MET CB HB3 sing N N 305 MET CG SD sing N N 306 MET CG HG2 sing N N 307 MET CG HG3 sing N N 308 MET SD CE sing N N 309 MET CE HE1 sing N N 310 MET CE HE2 sing N N 311 MET CE HE3 sing N N 312 MET OXT HXT sing N N 313 NAG C1 C2 sing N N 314 NAG C1 O1 sing N N 315 NAG C1 O5 sing N N 316 NAG C1 H1 sing N N 317 NAG C2 C3 sing N N 318 NAG C2 N2 sing N N 319 NAG C2 H2 sing N N 320 NAG C3 C4 sing N N 321 NAG C3 O3 sing N N 322 NAG C3 H3 sing N N 323 NAG C4 C5 sing N N 324 NAG C4 O4 sing N N 325 NAG C4 H4 sing N N 326 NAG C5 C6 sing N N 327 NAG C5 O5 sing N N 328 NAG C5 H5 sing N N 329 NAG C6 O6 sing N N 330 NAG C6 H61 sing N N 331 NAG C6 H62 sing N N 332 NAG C7 C8 sing N N 333 NAG C7 N2 sing N N 334 NAG C7 O7 doub N N 335 NAG C8 H81 sing N N 336 NAG C8 H82 sing N N 337 NAG C8 H83 sing N N 338 NAG N2 HN2 sing N N 339 NAG O1 HO1 sing N N 340 NAG O3 HO3 sing N N 341 NAG O4 HO4 sing N N 342 NAG O6 HO6 sing N N 343 PHE N CA sing N N 344 PHE N H sing N N 345 PHE N H2 sing N N 346 PHE CA C sing N N 347 PHE CA CB sing N N 348 PHE CA HA sing N N 349 PHE C O doub N N 350 PHE C OXT sing N N 351 PHE CB CG sing N N 352 PHE CB HB2 sing N N 353 PHE CB HB3 sing N N 354 PHE CG CD1 doub Y N 355 PHE CG CD2 sing Y N 356 PHE CD1 CE1 sing Y N 357 PHE CD1 HD1 sing N N 358 PHE CD2 CE2 doub Y N 359 PHE CD2 HD2 sing N N 360 PHE CE1 CZ doub Y N 361 PHE CE1 HE1 sing N N 362 PHE CE2 CZ sing Y N 363 PHE CE2 HE2 sing N N 364 PHE CZ HZ sing N N 365 PHE OXT HXT sing N N 366 PRO N CA sing N N 367 PRO N CD sing N N 368 PRO N H sing N N 369 PRO CA C sing N N 370 PRO CA CB sing N N 371 PRO CA HA sing N N 372 PRO C O doub N N 373 PRO C OXT sing N N 374 PRO CB CG sing N N 375 PRO CB HB2 sing N N 376 PRO CB HB3 sing N N 377 PRO CG CD sing N N 378 PRO CG HG2 sing N N 379 PRO CG HG3 sing N N 380 PRO CD HD2 sing N N 381 PRO CD HD3 sing N N 382 PRO OXT HXT sing N N 383 SER N CA sing N N 384 SER N H sing N N 385 SER N H2 sing N N 386 SER CA C sing N N 387 SER CA CB sing N N 388 SER CA HA sing N N 389 SER C O doub N N 390 SER C OXT sing N N 391 SER CB OG sing N N 392 SER CB HB2 sing N N 393 SER CB HB3 sing N N 394 SER OG HG sing N N 395 SER OXT HXT sing N N 396 THR N CA sing N N 397 THR N H sing N N 398 THR N H2 sing N N 399 THR CA C sing N N 400 THR CA CB sing N N 401 THR CA HA sing N N 402 THR C O doub N N 403 THR C OXT sing N N 404 THR CB OG1 sing N N 405 THR CB CG2 sing N N 406 THR CB HB sing N N 407 THR OG1 HG1 sing N N 408 THR CG2 HG21 sing N N 409 THR CG2 HG22 sing N N 410 THR CG2 HG23 sing N N 411 THR OXT HXT sing N N 412 TRP N CA sing N N 413 TRP N H sing N N 414 TRP N H2 sing N N 415 TRP CA C sing N N 416 TRP CA CB sing N N 417 TRP CA HA sing N N 418 TRP C O doub N N 419 TRP C OXT sing N N 420 TRP CB CG sing N N 421 TRP CB HB2 sing N N 422 TRP CB HB3 sing N N 423 TRP CG CD1 doub Y N 424 TRP CG CD2 sing Y N 425 TRP CD1 NE1 sing Y N 426 TRP CD1 HD1 sing N N 427 TRP CD2 CE2 doub Y N 428 TRP CD2 CE3 sing Y N 429 TRP NE1 CE2 sing Y N 430 TRP NE1 HE1 sing N N 431 TRP CE2 CZ2 sing Y N 432 TRP CE3 CZ3 doub Y N 433 TRP CE3 HE3 sing N N 434 TRP CZ2 CH2 doub Y N 435 TRP CZ2 HZ2 sing N N 436 TRP CZ3 CH2 sing Y N 437 TRP CZ3 HZ3 sing N N 438 TRP CH2 HH2 sing N N 439 TRP OXT HXT sing N N 440 TYR N CA sing N N 441 TYR N H sing N N 442 TYR N H2 sing N N 443 TYR CA C sing N N 444 TYR CA CB sing N N 445 TYR CA HA sing N N 446 TYR C O doub N N 447 TYR C OXT sing N N 448 TYR CB CG sing N N 449 TYR CB HB2 sing N N 450 TYR CB HB3 sing N N 451 TYR CG CD1 doub Y N 452 TYR CG CD2 sing Y N 453 TYR CD1 CE1 sing Y N 454 TYR CD1 HD1 sing N N 455 TYR CD2 CE2 doub Y N 456 TYR CD2 HD2 sing N N 457 TYR CE1 CZ doub Y N 458 TYR CE1 HE1 sing N N 459 TYR CE2 CZ sing Y N 460 TYR CE2 HE2 sing N N 461 TYR CZ OH sing N N 462 TYR OH HH sing N N 463 TYR OXT HXT sing N N 464 VAL N CA sing N N 465 VAL N H sing N N 466 VAL N H2 sing N N 467 VAL CA C sing N N 468 VAL CA CB sing N N 469 VAL CA HA sing N N 470 VAL C O doub N N 471 VAL C OXT sing N N 472 VAL CB CG1 sing N N 473 VAL CB CG2 sing N N 474 VAL CB HB sing N N 475 VAL CG1 HG11 sing N N 476 VAL CG1 HG12 sing N N 477 VAL CG1 HG13 sing N N 478 VAL CG2 HG21 sing N N 479 VAL CG2 HG22 sing N N 480 VAL CG2 HG23 sing N N 481 VAL OXT HXT sing N N 482 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 NAG 1 C NAG 1 ? NAG 1299 n C 2 NAG 2 C NAG 2 ? NAG 1300 n C 2 BMA 3 C BMA 3 ? BMA 1301 n C 2 MAN 4 C MAN 4 ? MAN 1302 n D 3 NAG 1 D NAG 1 ? NAG 2299 n D 3 NAG 2 D NAG 2 ? NAG 2300 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man M6D 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp6PO3 MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c6-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O6 HO6 sing ? 4 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 3 NAG 1 n 3 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 6-O-phosphono-beta-D-mannopyranose M6D 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1M6P _pdbx_initial_refinement_model.details 'PDB entry 1M6P' #