data_3K9W # _entry.id 3K9W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K9W pdb_00003k9w 10.2210/pdb3k9w/pdb RCSB RCSB055729 ? ? WWPDB D_1000055729 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3ikz 'structure at neutral pH with dephospho-CoA' unspecified TargetDB BupsA.00142.a . unspecified # _pdbx_database_status.entry_id 3K9W _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-10-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structures of phosphopantetheine adenylyltransferase from Burkholderia pseudomallei.' 'Acta Crystallogr.,Sect.F' 67 1032 1037 2011 ? DK 1744-3091 ? ? 21904046 10.1107/S1744309111004349 1 'Combining functional and structural genomics to sample the essential Burkholderia structome.' 'Plos One' 8 e53851 e53851 2013 ? US 1932-6203 ? ? 23382856 10.1371/journal.pone.0053851 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edwards, T.E.' 1 ? primary 'Leibly, D.J.' 2 ? primary 'Bhandari, J.' 3 ? primary 'Statnekov, J.B.' 4 ? primary 'Phan, I.' 5 ? primary 'Dieterich, S.H.' 6 ? primary 'Abendroth, J.' 7 ? primary 'Staker, B.L.' 8 ? primary 'Van Voorhis, W.C.' 9 ? primary 'Myler, P.J.' 10 ? primary 'Stewart, L.J.' 11 ? 1 'Baugh, L.' 12 ? 1 'Gallagher, L.A.' 13 ? 1 'Patrapuvich, R.' 14 ? 1 'Clifton, M.C.' 15 ? 1 'Gardberg, A.S.' 16 ? 1 'Edwards, T.E.' 17 ? 1 'Armour, B.' 18 ? 1 'Begley, D.W.' 19 ? 1 'Dieterich, S.H.' 20 ? 1 'Dranow, D.M.' 21 ? 1 'Abendroth, J.' 22 ? 1 'Fairman, J.W.' 23 ? 1 'Fox, D.' 24 ? 1 'Staker, B.L.' 25 ? 1 'Phan, I.' 26 ? 1 'Gillespie, A.' 27 ? 1 'Choi, R.' 28 ? 1 'Nakazawa-Hewitt, S.' 29 ? 1 'Nguyen, M.T.' 30 ? 1 'Napuli, A.' 31 ? 1 'Barrett, L.' 32 ? 1 'Buchko, G.W.' 33 ? 1 'Stacy, R.' 34 ? 1 'Myler, P.J.' 35 ? 1 'Stewart, L.J.' 36 ? 1 'Manoil, C.' 37 ? 1 'Van Voorhis, W.C.' 38 ? # _cell.entry_id 3K9W _cell.length_a 134.431 _cell.length_b 134.431 _cell.length_c 134.431 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3K9W _symmetry.space_group_name_H-M 'I 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphopantetheine adenylyltransferase' 20840.877 1 2.7.7.3 ? ? ? 2 non-polymer syn ;4'-diphospho pantetheine ; 438.328 1 ? ? ? ? 3 non-polymer syn ADENINE 135.127 1 ? ? ? ? 4 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 5 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 7 water nat water 18.015 137 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pantetheine-phosphate adenylyltransferase, PPAT, Dephospho-CoA pyrophosphorylase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGTLEAQTQGPGSMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLG HYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGG DVSKFVFPSVEKWLTEKVAAMAQGPSA ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGTLEAQTQGPGSMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLG HYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGG DVSKFVFPSVEKWLTEKVAAMAQGPSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier BupsA.00142.a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 SER n 1 22 MET n 1 23 VAL n 1 24 VAL n 1 25 ALA n 1 26 VAL n 1 27 TYR n 1 28 PRO n 1 29 GLY n 1 30 THR n 1 31 PHE n 1 32 ASP n 1 33 PRO n 1 34 LEU n 1 35 THR n 1 36 ARG n 1 37 GLY n 1 38 HIS n 1 39 GLU n 1 40 ASP n 1 41 LEU n 1 42 VAL n 1 43 ARG n 1 44 ARG n 1 45 ALA n 1 46 SER n 1 47 SER n 1 48 ILE n 1 49 PHE n 1 50 ASP n 1 51 THR n 1 52 LEU n 1 53 VAL n 1 54 VAL n 1 55 GLY n 1 56 VAL n 1 57 ALA n 1 58 ASP n 1 59 SER n 1 60 ARG n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 PRO n 1 65 PHE n 1 66 PHE n 1 67 SER n 1 68 LEU n 1 69 GLU n 1 70 GLU n 1 71 ARG n 1 72 LEU n 1 73 LYS n 1 74 ILE n 1 75 ALA n 1 76 ASN n 1 77 GLU n 1 78 VAL n 1 79 LEU n 1 80 GLY n 1 81 HIS n 1 82 TYR n 1 83 PRO n 1 84 ASN n 1 85 VAL n 1 86 LYS n 1 87 VAL n 1 88 MET n 1 89 GLY n 1 90 PHE n 1 91 THR n 1 92 GLY n 1 93 LEU n 1 94 LEU n 1 95 LYS n 1 96 ASP n 1 97 PHE n 1 98 VAL n 1 99 ARG n 1 100 ALA n 1 101 ASN n 1 102 ASP n 1 103 ALA n 1 104 ARG n 1 105 VAL n 1 106 ILE n 1 107 VAL n 1 108 ARG n 1 109 GLY n 1 110 LEU n 1 111 ARG n 1 112 ALA n 1 113 VAL n 1 114 SER n 1 115 ASP n 1 116 PHE n 1 117 GLU n 1 118 TYR n 1 119 GLU n 1 120 PHE n 1 121 GLN n 1 122 MET n 1 123 ALA n 1 124 GLY n 1 125 MET n 1 126 ASN n 1 127 ARG n 1 128 TYR n 1 129 LEU n 1 130 LEU n 1 131 PRO n 1 132 ASP n 1 133 VAL n 1 134 GLU n 1 135 THR n 1 136 MET n 1 137 PHE n 1 138 MET n 1 139 THR n 1 140 PRO n 1 141 SER n 1 142 ASP n 1 143 GLN n 1 144 TYR n 1 145 GLN n 1 146 PHE n 1 147 ILE n 1 148 SER n 1 149 GLY n 1 150 THR n 1 151 ILE n 1 152 VAL n 1 153 ARG n 1 154 GLU n 1 155 ILE n 1 156 ALA n 1 157 GLN n 1 158 LEU n 1 159 GLY n 1 160 GLY n 1 161 ASP n 1 162 VAL n 1 163 SER n 1 164 LYS n 1 165 PHE n 1 166 VAL n 1 167 PHE n 1 168 PRO n 1 169 SER n 1 170 VAL n 1 171 GLU n 1 172 LYS n 1 173 TRP n 1 174 LEU n 1 175 THR n 1 176 GLU n 1 177 LYS n 1 178 VAL n 1 179 ALA n 1 180 ALA n 1 181 MET n 1 182 ALA n 1 183 GLN n 1 184 GLY n 1 185 PRO n 1 186 SER n 1 187 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'coaD, BURPS1710b_0748' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1710b _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia pseudomallei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 320372 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA0421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code COAD_BURP1 _struct_ref.pdbx_db_accession Q3JW91 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDFVRAN DARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEKVAAM AQGPSA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3K9W _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 187 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3JW91 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 166 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 166 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3K9W MET A 1 ? UNP Q3JW91 ? ? 'expression tag' -20 1 1 3K9W ALA A 2 ? UNP Q3JW91 ? ? 'expression tag' -19 2 1 3K9W HIS A 3 ? UNP Q3JW91 ? ? 'expression tag' -18 3 1 3K9W HIS A 4 ? UNP Q3JW91 ? ? 'expression tag' -17 4 1 3K9W HIS A 5 ? UNP Q3JW91 ? ? 'expression tag' -16 5 1 3K9W HIS A 6 ? UNP Q3JW91 ? ? 'expression tag' -15 6 1 3K9W HIS A 7 ? UNP Q3JW91 ? ? 'expression tag' -14 7 1 3K9W HIS A 8 ? UNP Q3JW91 ? ? 'expression tag' -13 8 1 3K9W MET A 9 ? UNP Q3JW91 ? ? 'expression tag' -12 9 1 3K9W GLY A 10 ? UNP Q3JW91 ? ? 'expression tag' -11 10 1 3K9W THR A 11 ? UNP Q3JW91 ? ? 'expression tag' -10 11 1 3K9W LEU A 12 ? UNP Q3JW91 ? ? 'expression tag' -9 12 1 3K9W GLU A 13 ? UNP Q3JW91 ? ? 'expression tag' -8 13 1 3K9W ALA A 14 ? UNP Q3JW91 ? ? 'expression tag' -7 14 1 3K9W GLN A 15 ? UNP Q3JW91 ? ? 'expression tag' -6 15 1 3K9W THR A 16 ? UNP Q3JW91 ? ? 'expression tag' -5 16 1 3K9W GLN A 17 ? UNP Q3JW91 ? ? 'expression tag' -4 17 1 3K9W GLY A 18 ? UNP Q3JW91 ? ? 'expression tag' -3 18 1 3K9W PRO A 19 ? UNP Q3JW91 ? ? 'expression tag' -2 19 1 3K9W GLY A 20 ? UNP Q3JW91 ? ? 'expression tag' -1 20 1 3K9W SER A 21 ? UNP Q3JW91 ? ? 'expression tag' 0 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4PS non-polymer . ;4'-diphospho pantetheine ; 'N~3~-[(2R)-2-hydroxy-4-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-3,3-dimethylbutanoyl]-N-(2-sulfanylethyl)-beta-alaninamide' 'C11 H24 N2 O10 P2 S' 438.328 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ADE non-polymer . ADENINE ? 'C5 H5 N5' 135.127 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3K9W _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;CSHT condition F1: 0.2 M ammonium sulfate, 0.1 M NaOAc pH 4.6, 30% PEG MME 2000, 20% EG as cryo-protectant, 19.2 mg/mL protein in 25 mM Hepes pH 7.0, 0.3 M NaCl, 10% glycerol, 5 mM DTT, crystal tracking ID 204963f1, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2009-09-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97953 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97953 # _reflns.entry_id 3K9W _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.600 _reflns.number_obs 27383 _reflns.number_all ? _reflns.percent_possible_obs 99.000 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 32.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 100.00 _reflns_shell.Rmerge_I_obs 0.555 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.98 _reflns_shell.pdbx_redundancy 9.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3K9W _refine.ls_number_reflns_obs 25986 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.36 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 98.890 _refine.ls_R_factor_obs 0.19200 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19119 _refine.ls_R_factor_R_free 0.20690 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1363 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.50 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.B_iso_mean 15.125 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3IKZ _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.087 _refine.pdbx_overall_ESU_R_Free 0.083 _refine.overall_SU_ML 0.052 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.200 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1279 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 137 _refine_hist.number_atoms_total 1471 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 26.36 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1453 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.193 1.997 ? 1978 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.559 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.090 23.030 ? 66 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.904 15.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.527 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 212 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1107 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.646 1.500 ? 857 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.248 2.000 ? 1395 'X-RAY DIFFRACTION' ? r_scbond_it 1.912 3.000 ? 596 'X-RAY DIFFRACTION' ? r_scangle_it 3.115 4.500 ? 574 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.599 _refine_ls_shell.d_res_low 1.640 _refine_ls_shell.number_reflns_R_work 1905 _refine_ls_shell.R_factor_R_work 0.266 _refine_ls_shell.percent_reflns_obs 99.80 _refine_ls_shell.R_factor_R_free 0.229 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 113 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3K9W _struct.title ;Crystal structure of phosphopantetheine adenylyltransferase from Burkholderia pseudomallei with hydrolyzed 3'-dephospho Coenzyme A ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K9W _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Disease, Coenzyme A, CoA, biosynthesis, hydrolysis, ATP-binding, Coenzyme A biosynthesis, Nucleotide-binding, Nucleotidyltransferase, Transferase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 35 ? PHE A 49 ? THR A 14 PHE A 28 1 ? 15 HELX_P HELX_P2 2 SER A 59 ? LYS A 63 ? SER A 38 LYS A 42 5 ? 5 HELX_P HELX_P3 3 SER A 67 ? GLY A 80 ? SER A 46 GLY A 59 1 ? 14 HELX_P HELX_P4 4 LEU A 93 ? ASN A 101 ? LEU A 72 ASN A 80 1 ? 9 HELX_P HELX_P5 5 ASP A 115 ? LEU A 130 ? ASP A 94 LEU A 109 1 ? 16 HELX_P HELX_P6 6 SER A 141 ? GLN A 145 ? SER A 120 GLN A 124 5 ? 5 HELX_P HELX_P7 7 SER A 148 ? LEU A 158 ? SER A 127 LEU A 137 1 ? 11 HELX_P HELX_P8 8 PHE A 167 ? ALA A 182 ? PHE A 146 ALA A 161 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 32 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 11 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 33 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 12 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.56 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 85 ? PHE A 90 ? VAL A 64 PHE A 69 A 2 THR A 51 ? ALA A 57 ? THR A 30 ALA A 36 A 3 VAL A 24 ? GLY A 29 ? VAL A 3 GLY A 8 A 4 VAL A 105 ? GLY A 109 ? VAL A 84 GLY A 88 A 5 GLU A 134 ? MET A 138 ? GLU A 113 MET A 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 86 ? O LYS A 65 N VAL A 54 ? N VAL A 33 A 2 3 O VAL A 53 ? O VAL A 32 N ALA A 25 ? N ALA A 4 A 3 4 N VAL A 26 ? N VAL A 5 O VAL A 107 ? O VAL A 86 A 4 5 N ILE A 106 ? N ILE A 85 O MET A 136 ? O MET A 115 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 4PS 167 ? 22 'BINDING SITE FOR RESIDUE 4PS A 167' AC2 Software A ADE 168 ? 9 'BINDING SITE FOR RESIDUE ADE A 168' AC3 Software A PG4 169 ? 10 'BINDING SITE FOR RESIDUE PG4 A 169' AC4 Software A ACT 170 ? 5 'BINDING SITE FOR RESIDUE ACT A 170' AC5 Software A SO4 171 ? 7 'BINDING SITE FOR RESIDUE SO4 A 171' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 GLY A 29 ? GLY A 8 . ? 1_555 ? 2 AC1 22 THR A 30 ? THR A 9 . ? 1_555 ? 3 AC1 22 PHE A 31 ? PHE A 10 . ? 1_555 ? 4 AC1 22 HIS A 38 ? HIS A 17 . ? 1_555 ? 5 AC1 22 ALA A 57 ? ALA A 36 . ? 1_555 ? 6 AC1 22 LYS A 62 ? LYS A 41 . ? 1_555 ? 7 AC1 22 GLY A 92 ? GLY A 71 . ? 1_555 ? 8 AC1 22 LEU A 93 ? LEU A 72 . ? 1_555 ? 9 AC1 22 LEU A 94 ? LEU A 73 . ? 1_555 ? 10 AC1 22 ARG A 108 ? ARG A 87 . ? 1_555 ? 11 AC1 22 TYR A 118 ? TYR A 97 . ? 1_555 ? 12 AC1 22 ASN A 126 ? ASN A 105 . ? 1_555 ? 13 AC1 22 ILE A 151 ? ILE A 130 . ? 12_555 ? 14 AC1 22 GLU A 154 ? GLU A 133 . ? 12_555 ? 15 AC1 22 LEU A 158 ? LEU A 137 . ? 12_555 ? 16 AC1 22 HOH G . ? HOH A 184 . ? 1_555 ? 17 AC1 22 HOH G . ? HOH A 214 . ? 1_555 ? 18 AC1 22 HOH G . ? HOH A 232 . ? 1_555 ? 19 AC1 22 HOH G . ? HOH A 262 . ? 1_555 ? 20 AC1 22 HOH G . ? HOH A 266 . ? 12_555 ? 21 AC1 22 HOH G . ? HOH A 301 . ? 1_555 ? 22 AC1 22 HOH G . ? HOH A 306 . ? 1_555 ? 23 AC2 9 GLY A 37 ? GLY A 16 . ? 1_555 ? 24 AC2 9 ARG A 111 ? ARG A 90 . ? 1_555 ? 25 AC2 9 PRO A 140 ? PRO A 119 . ? 1_555 ? 26 AC2 9 TYR A 144 ? TYR A 123 . ? 1_555 ? 27 AC2 9 ILE A 147 ? ILE A 126 . ? 1_555 ? 28 AC2 9 ACT E . ? ACT A 170 . ? 1_555 ? 29 AC2 9 SO4 F . ? SO4 A 171 . ? 1_555 ? 30 AC2 9 HOH G . ? HOH A 197 . ? 1_555 ? 31 AC2 9 HOH G . ? HOH A 306 . ? 1_555 ? 32 AC3 10 ASP A 58 ? ASP A 37 . ? 1_555 ? 33 AC3 10 PHE A 66 ? PHE A 45 . ? 1_555 ? 34 AC3 10 SER A 67 ? SER A 46 . ? 1_555 ? 35 AC3 10 LEU A 68 ? LEU A 47 . ? 1_555 ? 36 AC3 10 GLU A 69 ? GLU A 48 . ? 1_555 ? 37 AC3 10 ARG A 71 ? ARG A 50 . ? 1_555 ? 38 AC3 10 GLU A 176 ? GLU A 155 . ? 21_555 ? 39 AC3 10 ALA A 179 ? ALA A 158 . ? 21_555 ? 40 AC3 10 ALA A 180 ? ALA A 159 . ? 21_555 ? 41 AC3 10 HOH G . ? HOH A 225 . ? 1_555 ? 42 AC4 5 SER A 148 ? SER A 127 . ? 1_555 ? 43 AC4 5 GLY A 149 ? GLY A 128 . ? 1_555 ? 44 AC4 5 THR A 150 ? THR A 129 . ? 1_555 ? 45 AC4 5 ADE C . ? ADE A 168 . ? 1_555 ? 46 AC4 5 HOH G . ? HOH A 193 . ? 1_555 ? 47 AC5 7 ARG A 111 ? ARG A 90 . ? 1_555 ? 48 AC5 7 SER A 114 ? SER A 93 . ? 1_555 ? 49 AC5 7 ASP A 115 ? ASP A 94 . ? 1_555 ? 50 AC5 7 TYR A 118 ? TYR A 97 . ? 1_555 ? 51 AC5 7 GLU A 119 ? GLU A 98 . ? 1_555 ? 52 AC5 7 ADE C . ? ADE A 168 . ? 1_555 ? 53 AC5 7 HOH G . ? HOH A 307 . ? 1_555 ? # _atom_sites.entry_id 3K9W _atom_sites.fract_transf_matrix[1][1] 0.007439 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007439 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007439 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -20 ? ? ? A . n A 1 2 ALA 2 -19 ? ? ? A . n A 1 3 HIS 3 -18 ? ? ? A . n A 1 4 HIS 4 -17 ? ? ? A . n A 1 5 HIS 5 -16 ? ? ? A . n A 1 6 HIS 6 -15 ? ? ? A . n A 1 7 HIS 7 -14 ? ? ? A . n A 1 8 HIS 8 -13 ? ? ? A . n A 1 9 MET 9 -12 ? ? ? A . n A 1 10 GLY 10 -11 ? ? ? A . n A 1 11 THR 11 -10 ? ? ? A . n A 1 12 LEU 12 -9 ? ? ? A . n A 1 13 GLU 13 -8 ? ? ? A . n A 1 14 ALA 14 -7 ? ? ? A . n A 1 15 GLN 15 -6 ? ? ? A . n A 1 16 THR 16 -5 ? ? ? A . n A 1 17 GLN 17 -4 ? ? ? A . n A 1 18 GLY 18 -3 ? ? ? A . n A 1 19 PRO 19 -2 ? ? ? A . n A 1 20 GLY 20 -1 -1 GLY GLY A . n A 1 21 SER 21 0 0 SER SER A . n A 1 22 MET 22 1 1 MET MET A . n A 1 23 VAL 23 2 2 VAL VAL A . n A 1 24 VAL 24 3 3 VAL VAL A . n A 1 25 ALA 25 4 4 ALA ALA A . n A 1 26 VAL 26 5 5 VAL VAL A . n A 1 27 TYR 27 6 6 TYR TYR A . n A 1 28 PRO 28 7 7 PRO PRO A . n A 1 29 GLY 29 8 8 GLY GLY A . n A 1 30 THR 30 9 9 THR THR A . n A 1 31 PHE 31 10 10 PHE PHE A . n A 1 32 ASP 32 11 11 ASP ASP A . n A 1 33 PRO 33 12 12 PRO PRO A . n A 1 34 LEU 34 13 13 LEU LEU A . n A 1 35 THR 35 14 14 THR THR A . n A 1 36 ARG 36 15 15 ARG ARG A . n A 1 37 GLY 37 16 16 GLY GLY A . n A 1 38 HIS 38 17 17 HIS HIS A . n A 1 39 GLU 39 18 18 GLU GLU A . n A 1 40 ASP 40 19 19 ASP ASP A . n A 1 41 LEU 41 20 20 LEU LEU A . n A 1 42 VAL 42 21 21 VAL VAL A . n A 1 43 ARG 43 22 22 ARG ARG A . n A 1 44 ARG 44 23 23 ARG ARG A . n A 1 45 ALA 45 24 24 ALA ALA A . n A 1 46 SER 46 25 25 SER SER A . n A 1 47 SER 47 26 26 SER SER A . n A 1 48 ILE 48 27 27 ILE ILE A . n A 1 49 PHE 49 28 28 PHE PHE A . n A 1 50 ASP 50 29 29 ASP ASP A . n A 1 51 THR 51 30 30 THR THR A . n A 1 52 LEU 52 31 31 LEU LEU A . n A 1 53 VAL 53 32 32 VAL VAL A . n A 1 54 VAL 54 33 33 VAL VAL A . n A 1 55 GLY 55 34 34 GLY GLY A . n A 1 56 VAL 56 35 35 VAL VAL A . n A 1 57 ALA 57 36 36 ALA ALA A . n A 1 58 ASP 58 37 37 ASP ASP A . n A 1 59 SER 59 38 38 SER SER A . n A 1 60 ARG 60 39 39 ARG ARG A . n A 1 61 ALA 61 40 40 ALA ALA A . n A 1 62 LYS 62 41 41 LYS LYS A . n A 1 63 LYS 63 42 42 LYS LYS A . n A 1 64 PRO 64 43 43 PRO PRO A . n A 1 65 PHE 65 44 44 PHE PHE A . n A 1 66 PHE 66 45 45 PHE PHE A . n A 1 67 SER 67 46 46 SER SER A . n A 1 68 LEU 68 47 47 LEU LEU A . n A 1 69 GLU 69 48 48 GLU GLU A . n A 1 70 GLU 70 49 49 GLU GLU A . n A 1 71 ARG 71 50 50 ARG ARG A . n A 1 72 LEU 72 51 51 LEU LEU A . n A 1 73 LYS 73 52 52 LYS LYS A . n A 1 74 ILE 74 53 53 ILE ILE A . n A 1 75 ALA 75 54 54 ALA ALA A . n A 1 76 ASN 76 55 55 ASN ASN A . n A 1 77 GLU 77 56 56 GLU GLU A . n A 1 78 VAL 78 57 57 VAL VAL A . n A 1 79 LEU 79 58 58 LEU LEU A . n A 1 80 GLY 80 59 59 GLY GLY A . n A 1 81 HIS 81 60 60 HIS HIS A . n A 1 82 TYR 82 61 61 TYR TYR A . n A 1 83 PRO 83 62 62 PRO PRO A . n A 1 84 ASN 84 63 63 ASN ASN A . n A 1 85 VAL 85 64 64 VAL VAL A . n A 1 86 LYS 86 65 65 LYS LYS A . n A 1 87 VAL 87 66 66 VAL VAL A . n A 1 88 MET 88 67 67 MET MET A . n A 1 89 GLY 89 68 68 GLY GLY A . n A 1 90 PHE 90 69 69 PHE PHE A . n A 1 91 THR 91 70 70 THR THR A . n A 1 92 GLY 92 71 71 GLY GLY A . n A 1 93 LEU 93 72 72 LEU LEU A . n A 1 94 LEU 94 73 73 LEU LEU A . n A 1 95 LYS 95 74 74 LYS LYS A . n A 1 96 ASP 96 75 75 ASP ASP A . n A 1 97 PHE 97 76 76 PHE PHE A . n A 1 98 VAL 98 77 77 VAL VAL A . n A 1 99 ARG 99 78 78 ARG ARG A . n A 1 100 ALA 100 79 79 ALA ALA A . n A 1 101 ASN 101 80 80 ASN ASN A . n A 1 102 ASP 102 81 81 ASP ASP A . n A 1 103 ALA 103 82 82 ALA ALA A . n A 1 104 ARG 104 83 83 ARG ARG A . n A 1 105 VAL 105 84 84 VAL VAL A . n A 1 106 ILE 106 85 85 ILE ILE A . n A 1 107 VAL 107 86 86 VAL VAL A . n A 1 108 ARG 108 87 87 ARG ARG A . n A 1 109 GLY 109 88 88 GLY GLY A . n A 1 110 LEU 110 89 89 LEU LEU A . n A 1 111 ARG 111 90 90 ARG ARG A . n A 1 112 ALA 112 91 91 ALA ALA A . n A 1 113 VAL 113 92 92 VAL VAL A . n A 1 114 SER 114 93 93 SER SER A . n A 1 115 ASP 115 94 94 ASP ASP A . n A 1 116 PHE 116 95 95 PHE PHE A . n A 1 117 GLU 117 96 96 GLU GLU A . n A 1 118 TYR 118 97 97 TYR TYR A . n A 1 119 GLU 119 98 98 GLU GLU A . n A 1 120 PHE 120 99 99 PHE PHE A . n A 1 121 GLN 121 100 100 GLN GLN A . n A 1 122 MET 122 101 101 MET MET A . n A 1 123 ALA 123 102 102 ALA ALA A . n A 1 124 GLY 124 103 103 GLY GLY A . n A 1 125 MET 125 104 104 MET MET A . n A 1 126 ASN 126 105 105 ASN ASN A . n A 1 127 ARG 127 106 106 ARG ARG A . n A 1 128 TYR 128 107 107 TYR TYR A . n A 1 129 LEU 129 108 108 LEU LEU A . n A 1 130 LEU 130 109 109 LEU LEU A . n A 1 131 PRO 131 110 110 PRO PRO A . n A 1 132 ASP 132 111 111 ASP ASP A . n A 1 133 VAL 133 112 112 VAL VAL A . n A 1 134 GLU 134 113 113 GLU GLU A . n A 1 135 THR 135 114 114 THR THR A . n A 1 136 MET 136 115 115 MET MET A . n A 1 137 PHE 137 116 116 PHE PHE A . n A 1 138 MET 138 117 117 MET MET A . n A 1 139 THR 139 118 118 THR THR A . n A 1 140 PRO 140 119 119 PRO PRO A . n A 1 141 SER 141 120 120 SER SER A . n A 1 142 ASP 142 121 121 ASP ASP A . n A 1 143 GLN 143 122 122 GLN GLN A . n A 1 144 TYR 144 123 123 TYR TYR A . n A 1 145 GLN 145 124 124 GLN GLN A . n A 1 146 PHE 146 125 125 PHE PHE A . n A 1 147 ILE 147 126 126 ILE ILE A . n A 1 148 SER 148 127 127 SER SER A . n A 1 149 GLY 149 128 128 GLY GLY A . n A 1 150 THR 150 129 129 THR THR A . n A 1 151 ILE 151 130 130 ILE ILE A . n A 1 152 VAL 152 131 131 VAL VAL A . n A 1 153 ARG 153 132 132 ARG ARG A . n A 1 154 GLU 154 133 133 GLU GLU A . n A 1 155 ILE 155 134 134 ILE ILE A . n A 1 156 ALA 156 135 135 ALA ALA A . n A 1 157 GLN 157 136 136 GLN GLN A . n A 1 158 LEU 158 137 137 LEU LEU A . n A 1 159 GLY 159 138 138 GLY GLY A . n A 1 160 GLY 160 139 139 GLY GLY A . n A 1 161 ASP 161 140 140 ASP ASP A . n A 1 162 VAL 162 141 141 VAL VAL A . n A 1 163 SER 163 142 142 SER SER A . n A 1 164 LYS 164 143 143 LYS LYS A . n A 1 165 PHE 165 144 144 PHE PHE A . n A 1 166 VAL 166 145 145 VAL VAL A . n A 1 167 PHE 167 146 146 PHE PHE A . n A 1 168 PRO 168 147 147 PRO PRO A . n A 1 169 SER 169 148 148 SER SER A . n A 1 170 VAL 170 149 149 VAL VAL A . n A 1 171 GLU 171 150 150 GLU GLU A . n A 1 172 LYS 172 151 151 LYS LYS A . n A 1 173 TRP 173 152 152 TRP TRP A . n A 1 174 LEU 174 153 153 LEU LEU A . n A 1 175 THR 175 154 154 THR THR A . n A 1 176 GLU 176 155 155 GLU GLU A . n A 1 177 LYS 177 156 156 LYS LYS A . n A 1 178 VAL 178 157 157 VAL VAL A . n A 1 179 ALA 179 158 158 ALA ALA A . n A 1 180 ALA 180 159 159 ALA ALA A . n A 1 181 MET 181 160 160 MET MET A . n A 1 182 ALA 182 161 161 ALA ALA A . n A 1 183 GLN 183 162 ? ? ? A . n A 1 184 GLY 184 163 ? ? ? A . n A 1 185 PRO 185 164 ? ? ? A . n A 1 186 SER 186 165 ? ? ? A . n A 1 187 ALA 187 166 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4PS 1 167 167 4PS 4PS A . C 3 ADE 1 168 168 ADE ADE A . D 4 PG4 1 169 169 PG4 PG4 A . E 5 ACT 1 170 170 ACT ACT A . F 6 SO4 1 171 171 SO4 SO4 A . G 7 HOH 1 172 172 HOH HOH A . G 7 HOH 2 173 173 HOH HOH A . G 7 HOH 3 174 174 HOH HOH A . G 7 HOH 4 175 175 HOH HOH A . G 7 HOH 5 176 176 HOH HOH A . G 7 HOH 6 177 177 HOH HOH A . G 7 HOH 7 178 178 HOH HOH A . G 7 HOH 8 179 179 HOH HOH A . G 7 HOH 9 180 180 HOH HOH A . G 7 HOH 10 181 181 HOH HOH A . G 7 HOH 11 182 182 HOH HOH A . G 7 HOH 12 183 183 HOH HOH A . G 7 HOH 13 184 184 HOH HOH A . G 7 HOH 14 185 185 HOH HOH A . G 7 HOH 15 186 186 HOH HOH A . G 7 HOH 16 187 187 HOH HOH A . G 7 HOH 17 188 188 HOH HOH A . G 7 HOH 18 189 189 HOH HOH A . G 7 HOH 19 190 190 HOH HOH A . G 7 HOH 20 191 191 HOH HOH A . G 7 HOH 21 192 192 HOH HOH A . G 7 HOH 22 193 193 HOH HOH A . G 7 HOH 23 194 194 HOH HOH A . G 7 HOH 24 195 195 HOH HOH A . G 7 HOH 25 196 196 HOH HOH A . G 7 HOH 26 197 197 HOH HOH A . G 7 HOH 27 198 198 HOH HOH A . G 7 HOH 28 199 199 HOH HOH A . G 7 HOH 29 200 200 HOH HOH A . G 7 HOH 30 201 201 HOH HOH A . G 7 HOH 31 202 202 HOH HOH A . G 7 HOH 32 203 203 HOH HOH A . G 7 HOH 33 204 204 HOH HOH A . G 7 HOH 34 205 205 HOH HOH A . G 7 HOH 35 206 206 HOH HOH A . G 7 HOH 36 207 207 HOH HOH A . G 7 HOH 37 208 208 HOH HOH A . G 7 HOH 38 209 209 HOH HOH A . G 7 HOH 39 210 210 HOH HOH A . G 7 HOH 40 211 211 HOH HOH A . G 7 HOH 41 212 212 HOH HOH A . G 7 HOH 42 213 213 HOH HOH A . G 7 HOH 43 214 214 HOH HOH A . G 7 HOH 44 215 215 HOH HOH A . G 7 HOH 45 216 216 HOH HOH A . G 7 HOH 46 217 217 HOH HOH A . G 7 HOH 47 218 218 HOH HOH A . G 7 HOH 48 219 219 HOH HOH A . G 7 HOH 49 220 220 HOH HOH A . G 7 HOH 50 221 221 HOH HOH A . G 7 HOH 51 222 222 HOH HOH A . G 7 HOH 52 223 223 HOH HOH A . G 7 HOH 53 224 224 HOH HOH A . G 7 HOH 54 225 225 HOH HOH A . G 7 HOH 55 226 226 HOH HOH A . G 7 HOH 56 227 227 HOH HOH A . G 7 HOH 57 228 228 HOH HOH A . G 7 HOH 58 229 229 HOH HOH A . G 7 HOH 59 230 230 HOH HOH A . G 7 HOH 60 231 231 HOH HOH A . G 7 HOH 61 232 232 HOH HOH A . G 7 HOH 62 233 233 HOH HOH A . G 7 HOH 63 234 234 HOH HOH A . G 7 HOH 64 235 235 HOH HOH A . G 7 HOH 65 236 236 HOH HOH A . G 7 HOH 66 237 237 HOH HOH A . G 7 HOH 67 238 238 HOH HOH A . G 7 HOH 68 239 239 HOH HOH A . G 7 HOH 69 240 240 HOH HOH A . G 7 HOH 70 241 241 HOH HOH A . G 7 HOH 71 242 242 HOH HOH A . G 7 HOH 72 243 243 HOH HOH A . G 7 HOH 73 244 244 HOH HOH A . G 7 HOH 74 245 245 HOH HOH A . G 7 HOH 75 246 246 HOH HOH A . G 7 HOH 76 247 247 HOH HOH A . G 7 HOH 77 248 248 HOH HOH A . G 7 HOH 78 249 249 HOH HOH A . G 7 HOH 79 250 250 HOH HOH A . G 7 HOH 80 251 251 HOH HOH A . G 7 HOH 81 252 252 HOH HOH A . G 7 HOH 82 253 253 HOH HOH A . G 7 HOH 83 254 254 HOH HOH A . G 7 HOH 84 255 255 HOH HOH A . G 7 HOH 85 256 256 HOH HOH A . G 7 HOH 86 257 257 HOH HOH A . G 7 HOH 87 258 258 HOH HOH A . G 7 HOH 88 259 259 HOH HOH A . G 7 HOH 89 260 260 HOH HOH A . G 7 HOH 90 261 261 HOH HOH A . G 7 HOH 91 262 262 HOH HOH A . G 7 HOH 92 263 263 HOH HOH A . G 7 HOH 93 264 264 HOH HOH A . G 7 HOH 94 265 265 HOH HOH A . G 7 HOH 95 266 266 HOH HOH A . G 7 HOH 96 267 267 HOH HOH A . G 7 HOH 97 268 268 HOH HOH A . G 7 HOH 98 269 269 HOH HOH A . G 7 HOH 99 270 270 HOH HOH A . G 7 HOH 100 271 271 HOH HOH A . G 7 HOH 101 272 272 HOH HOH A . G 7 HOH 102 273 273 HOH HOH A . G 7 HOH 103 274 274 HOH HOH A . G 7 HOH 104 275 275 HOH HOH A . G 7 HOH 105 276 276 HOH HOH A . G 7 HOH 106 277 277 HOH HOH A . G 7 HOH 107 278 278 HOH HOH A . G 7 HOH 108 279 279 HOH HOH A . G 7 HOH 109 280 280 HOH HOH A . G 7 HOH 110 281 281 HOH HOH A . G 7 HOH 111 282 282 HOH HOH A . G 7 HOH 112 283 283 HOH HOH A . G 7 HOH 113 284 284 HOH HOH A . G 7 HOH 114 285 285 HOH HOH A . G 7 HOH 115 286 286 HOH HOH A . G 7 HOH 116 287 287 HOH HOH A . G 7 HOH 117 288 288 HOH HOH A . G 7 HOH 118 289 289 HOH HOH A . G 7 HOH 119 290 290 HOH HOH A . G 7 HOH 120 291 291 HOH HOH A . G 7 HOH 121 292 292 HOH HOH A . G 7 HOH 122 293 293 HOH HOH A . G 7 HOH 123 294 294 HOH HOH A . G 7 HOH 124 295 295 HOH HOH A . G 7 HOH 125 296 296 HOH HOH A . G 7 HOH 126 297 297 HOH HOH A . G 7 HOH 127 298 298 HOH HOH A . G 7 HOH 128 299 299 HOH HOH A . G 7 HOH 129 300 300 HOH HOH A . G 7 HOH 130 301 301 HOH HOH A . G 7 HOH 131 302 302 HOH HOH A . G 7 HOH 132 303 303 HOH HOH A . G 7 HOH 133 304 304 HOH HOH A . G 7 HOH 134 305 305 HOH HOH A . G 7 HOH 135 306 306 HOH HOH A . G 7 HOH 136 307 307 HOH HOH A . G 7 HOH 137 308 308 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 24420 ? 1 MORE -163 ? 1 'SSA (A^2)' 34090 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 z,-x,-y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 12_555 -y,-z,x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 4 'crystal symmetry operation' 37_454 y-1/2,x+1/2,-z-1/2 0.0000000000 1.0000000000 0.0000000000 -67.2155000000 1.0000000000 0.0000000000 0.0000000000 67.2155000000 0.0000000000 0.0000000000 -1.0000000000 -67.2155000000 5 'crystal symmetry operation' 42_454 -x-1/2,z+1/2,y-1/2 -1.0000000000 0.0000000000 0.0000000000 -67.2155000000 0.0000000000 0.0000000000 1.0000000000 67.2155000000 0.0000000000 1.0000000000 0.0000000000 -67.2155000000 6 'crystal symmetry operation' 48_454 -z-1/2,-y+1/2,-x-1/2 0.0000000000 0.0000000000 -1.0000000000 -67.2155000000 0.0000000000 -1.0000000000 0.0000000000 67.2155000000 -1.0000000000 0.0000000000 0.0000000000 -67.2155000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-09-21 4 'Structure model' 1 3 2013-10-30 5 'Structure model' 1 4 2017-11-01 6 'Structure model' 1 5 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Source and taxonomy' 4 2 'Structure model' 'Version format compliance' 5 3 'Structure model' 'Database references' 6 4 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' 4 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -20.6496 _pdbx_refine_tls.origin_y 40.3354 _pdbx_refine_tls.origin_z -14.9325 _pdbx_refine_tls.T[1][1] 0.0218 _pdbx_refine_tls.T[2][2] 0.0363 _pdbx_refine_tls.T[3][3] 0.0062 _pdbx_refine_tls.T[1][2] 0.0035 _pdbx_refine_tls.T[1][3] 0.0006 _pdbx_refine_tls.T[2][3] 0.0032 _pdbx_refine_tls.L[1][1] 0.8150 _pdbx_refine_tls.L[2][2] 0.4859 _pdbx_refine_tls.L[3][3] 0.5799 _pdbx_refine_tls.L[1][2] -0.1022 _pdbx_refine_tls.L[1][3] -0.2033 _pdbx_refine_tls.L[2][3] 0.0567 _pdbx_refine_tls.S[1][1] -0.0412 _pdbx_refine_tls.S[2][2] -0.0082 _pdbx_refine_tls.S[3][3] 0.0494 _pdbx_refine_tls.S[1][2] -0.0208 _pdbx_refine_tls.S[1][3] 0.0040 _pdbx_refine_tls.S[2][3] -0.0143 _pdbx_refine_tls.S[2][1] 0.0163 _pdbx_refine_tls.S[3][1] -0.0144 _pdbx_refine_tls.S[3][2] 0.0430 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -1 A 161 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 167 A 171 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 172 A 308 ? . . . . ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_entry_details.entry_id 3K9W _pdbx_entry_details.nonpolymer_details ;THE COD/COA IN THE STRUCTURE APPEARS TO BE HYDROLYZED ACCORDING TO THE ELECTRON DENSITY WITH DIFFRACTION LIMITS OF 1.6 ANGSTROM. ONE COMPONENT IS 4'-DIPHOSPHO PANTETHEINE DENOTED AS 4PS IN THE COORDINATES. THE OTHER COMPONENTS ARE DEFINED AS ADENINE (ADE), SULFATE (SO4) AND THREE WATERS, WHICH FITS WELL INTO THE ELECTRON DENSITY MAP. THIS MODEL BEST REPRESENTS WHAT IS OBSERVED IN THE CRYSTAL. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 11 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -116.24 _pdbx_validate_torsion.psi 69.75 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 143 ? CG ? A LYS 164 CG 2 1 Y 1 A LYS 143 ? CD ? A LYS 164 CD 3 1 Y 1 A LYS 143 ? CE ? A LYS 164 CE 4 1 Y 1 A LYS 143 ? NZ ? A LYS 164 NZ 5 1 N 1 A PG4 169 ? O1 ? D PG4 1 O1 6 1 N 1 A PG4 169 ? C1 ? D PG4 1 C1 7 1 N 1 A PG4 169 ? C2 ? D PG4 1 C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? A MET 1 2 1 Y 1 A ALA -19 ? A ALA 2 3 1 Y 1 A HIS -18 ? A HIS 3 4 1 Y 1 A HIS -17 ? A HIS 4 5 1 Y 1 A HIS -16 ? A HIS 5 6 1 Y 1 A HIS -15 ? A HIS 6 7 1 Y 1 A HIS -14 ? A HIS 7 8 1 Y 1 A HIS -13 ? A HIS 8 9 1 Y 1 A MET -12 ? A MET 9 10 1 Y 1 A GLY -11 ? A GLY 10 11 1 Y 1 A THR -10 ? A THR 11 12 1 Y 1 A LEU -9 ? A LEU 12 13 1 Y 1 A GLU -8 ? A GLU 13 14 1 Y 1 A ALA -7 ? A ALA 14 15 1 Y 1 A GLN -6 ? A GLN 15 16 1 Y 1 A THR -5 ? A THR 16 17 1 Y 1 A GLN -4 ? A GLN 17 18 1 Y 1 A GLY -3 ? A GLY 18 19 1 Y 1 A PRO -2 ? A PRO 19 20 1 Y 1 A GLN 162 ? A GLN 183 21 1 Y 1 A GLY 163 ? A GLY 184 22 1 Y 1 A PRO 164 ? A PRO 185 23 1 Y 1 A SER 165 ? A SER 186 24 1 Y 1 A ALA 166 ? A ALA 187 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4PS O19 O N N 1 4PS P20 P N N 2 4PS O21 O N N 3 4PS O22 O N N 4 4PS O23 O N N 5 4PS P24 P N N 6 4PS O25 O N N 7 4PS O26 O N N 8 4PS O27 O N N 9 4PS C28 C N N 10 4PS C29 C N N 11 4PS C30 C N N 12 4PS C31 C N N 13 4PS C32 C N R 14 4PS O33 O N N 15 4PS C34 C N N 16 4PS O35 O N N 17 4PS N36 N N N 18 4PS C37 C N N 19 4PS C38 C N N 20 4PS C39 C N N 21 4PS O40 O N N 22 4PS N41 N N N 23 4PS C42 C N N 24 4PS C43 C N N 25 4PS S44 S N N 26 4PS HO19 H N N 27 4PS HO22 H N N 28 4PS HO26 H N N 29 4PS H28 H N N 30 4PS H28A H N N 31 4PS H30 H N N 32 4PS H30A H N N 33 4PS H30B H N N 34 4PS H31 H N N 35 4PS H31A H N N 36 4PS H31B H N N 37 4PS H32 H N N 38 4PS HO33 H N N 39 4PS HN36 H N N 40 4PS H37 H N N 41 4PS H37A H N N 42 4PS H38 H N N 43 4PS H38A H N N 44 4PS HN41 H N N 45 4PS H42 H N N 46 4PS H42A H N N 47 4PS H43 H N N 48 4PS H43A H N N 49 4PS HS44 H N N 50 ACT C C N N 51 ACT O O N N 52 ACT OXT O N N 53 ACT CH3 C N N 54 ACT H1 H N N 55 ACT H2 H N N 56 ACT H3 H N N 57 ADE N9 N Y N 58 ADE C8 C Y N 59 ADE N7 N Y N 60 ADE C5 C Y N 61 ADE C6 C Y N 62 ADE N6 N N N 63 ADE N1 N Y N 64 ADE C2 C Y N 65 ADE N3 N Y N 66 ADE C4 C Y N 67 ADE HN9 H N N 68 ADE H8 H N N 69 ADE HN61 H N N 70 ADE HN62 H N N 71 ADE H2 H N N 72 ALA N N N N 73 ALA CA C N S 74 ALA C C N N 75 ALA O O N N 76 ALA CB C N N 77 ALA OXT O N N 78 ALA H H N N 79 ALA H2 H N N 80 ALA HA H N N 81 ALA HB1 H N N 82 ALA HB2 H N N 83 ALA HB3 H N N 84 ALA HXT H N N 85 ARG N N N N 86 ARG CA C N S 87 ARG C C N N 88 ARG O O N N 89 ARG CB C N N 90 ARG CG C N N 91 ARG CD C N N 92 ARG NE N N N 93 ARG CZ C N N 94 ARG NH1 N N N 95 ARG NH2 N N N 96 ARG OXT O N N 97 ARG H H N N 98 ARG H2 H N N 99 ARG HA H N N 100 ARG HB2 H N N 101 ARG HB3 H N N 102 ARG HG2 H N N 103 ARG HG3 H N N 104 ARG HD2 H N N 105 ARG HD3 H N N 106 ARG HE H N N 107 ARG HH11 H N N 108 ARG HH12 H N N 109 ARG HH21 H N N 110 ARG HH22 H N N 111 ARG HXT H N N 112 ASN N N N N 113 ASN CA C N S 114 ASN C C N N 115 ASN O O N N 116 ASN CB C N N 117 ASN CG C N N 118 ASN OD1 O N N 119 ASN ND2 N N N 120 ASN OXT O N N 121 ASN H H N N 122 ASN H2 H N N 123 ASN HA H N N 124 ASN HB2 H N N 125 ASN HB3 H N N 126 ASN HD21 H N N 127 ASN HD22 H N N 128 ASN HXT H N N 129 ASP N N N N 130 ASP CA C N S 131 ASP C C N N 132 ASP O O N N 133 ASP CB C N N 134 ASP CG C N N 135 ASP OD1 O N N 136 ASP OD2 O N N 137 ASP OXT O N N 138 ASP H H N N 139 ASP H2 H N N 140 ASP HA H N N 141 ASP HB2 H N N 142 ASP HB3 H N N 143 ASP HD2 H N N 144 ASP HXT H N N 145 GLN N N N N 146 GLN CA C N S 147 GLN C C N N 148 GLN O O N N 149 GLN CB C N N 150 GLN CG C N N 151 GLN CD C N N 152 GLN OE1 O N N 153 GLN NE2 N N N 154 GLN OXT O N N 155 GLN H H N N 156 GLN H2 H N N 157 GLN HA H N N 158 GLN HB2 H N N 159 GLN HB3 H N N 160 GLN HG2 H N N 161 GLN HG3 H N N 162 GLN HE21 H N N 163 GLN HE22 H N N 164 GLN HXT H N N 165 GLU N N N N 166 GLU CA C N S 167 GLU C C N N 168 GLU O O N N 169 GLU CB C N N 170 GLU CG C N N 171 GLU CD C N N 172 GLU OE1 O N N 173 GLU OE2 O N N 174 GLU OXT O N N 175 GLU H H N N 176 GLU H2 H N N 177 GLU HA H N N 178 GLU HB2 H N N 179 GLU HB3 H N N 180 GLU HG2 H N N 181 GLU HG3 H N N 182 GLU HE2 H N N 183 GLU HXT H N N 184 GLY N N N N 185 GLY CA C N N 186 GLY C C N N 187 GLY O O N N 188 GLY OXT O N N 189 GLY H H N N 190 GLY H2 H N N 191 GLY HA2 H N N 192 GLY HA3 H N N 193 GLY HXT H N N 194 HIS N N N N 195 HIS CA C N S 196 HIS C C N N 197 HIS O O N N 198 HIS CB C N N 199 HIS CG C Y N 200 HIS ND1 N Y N 201 HIS CD2 C Y N 202 HIS CE1 C Y N 203 HIS NE2 N Y N 204 HIS OXT O N N 205 HIS H H N N 206 HIS H2 H N N 207 HIS HA H N N 208 HIS HB2 H N N 209 HIS HB3 H N N 210 HIS HD1 H N N 211 HIS HD2 H N N 212 HIS HE1 H N N 213 HIS HE2 H N N 214 HIS HXT H N N 215 HOH O O N N 216 HOH H1 H N N 217 HOH H2 H N N 218 ILE N N N N 219 ILE CA C N S 220 ILE C C N N 221 ILE O O N N 222 ILE CB C N S 223 ILE CG1 C N N 224 ILE CG2 C N N 225 ILE CD1 C N N 226 ILE OXT O N N 227 ILE H H N N 228 ILE H2 H N N 229 ILE HA H N N 230 ILE HB H N N 231 ILE HG12 H N N 232 ILE HG13 H N N 233 ILE HG21 H N N 234 ILE HG22 H N N 235 ILE HG23 H N N 236 ILE HD11 H N N 237 ILE HD12 H N N 238 ILE HD13 H N N 239 ILE HXT H N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 PG4 O1 O N N 308 PG4 C1 C N N 309 PG4 C2 C N N 310 PG4 O2 O N N 311 PG4 C3 C N N 312 PG4 C4 C N N 313 PG4 O3 O N N 314 PG4 C5 C N N 315 PG4 C6 C N N 316 PG4 O4 O N N 317 PG4 C7 C N N 318 PG4 C8 C N N 319 PG4 O5 O N N 320 PG4 HO1 H N N 321 PG4 H11 H N N 322 PG4 H12 H N N 323 PG4 H21 H N N 324 PG4 H22 H N N 325 PG4 H31 H N N 326 PG4 H32 H N N 327 PG4 H41 H N N 328 PG4 H42 H N N 329 PG4 H51 H N N 330 PG4 H52 H N N 331 PG4 H61 H N N 332 PG4 H62 H N N 333 PG4 H71 H N N 334 PG4 H72 H N N 335 PG4 H81 H N N 336 PG4 H82 H N N 337 PG4 HO5 H N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 SO4 S S N N 393 SO4 O1 O N N 394 SO4 O2 O N N 395 SO4 O3 O N N 396 SO4 O4 O N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4PS O19 P20 sing N N 1 4PS O19 HO19 sing N N 2 4PS O21 P20 doub N N 3 4PS P20 O22 sing N N 4 4PS P20 O23 sing N N 5 4PS O22 HO22 sing N N 6 4PS O23 P24 sing N N 7 4PS O25 P24 doub N N 8 4PS P24 O26 sing N N 9 4PS P24 O27 sing N N 10 4PS O26 HO26 sing N N 11 4PS O27 C28 sing N N 12 4PS C28 C29 sing N N 13 4PS C28 H28 sing N N 14 4PS C28 H28A sing N N 15 4PS C29 C31 sing N N 16 4PS C29 C32 sing N N 17 4PS C29 C30 sing N N 18 4PS C30 H30 sing N N 19 4PS C30 H30A sing N N 20 4PS C30 H30B sing N N 21 4PS C31 H31 sing N N 22 4PS C31 H31A sing N N 23 4PS C31 H31B sing N N 24 4PS O33 C32 sing N N 25 4PS C32 C34 sing N N 26 4PS C32 H32 sing N N 27 4PS O33 HO33 sing N N 28 4PS C34 O35 doub N N 29 4PS C34 N36 sing N N 30 4PS N36 C37 sing N N 31 4PS N36 HN36 sing N N 32 4PS C37 C38 sing N N 33 4PS C37 H37 sing N N 34 4PS C37 H37A sing N N 35 4PS C39 C38 sing N N 36 4PS C38 H38 sing N N 37 4PS C38 H38A sing N N 38 4PS N41 C39 sing N N 39 4PS C39 O40 doub N N 40 4PS C42 N41 sing N N 41 4PS N41 HN41 sing N N 42 4PS C43 C42 sing N N 43 4PS C42 H42 sing N N 44 4PS C42 H42A sing N N 45 4PS S44 C43 sing N N 46 4PS C43 H43 sing N N 47 4PS C43 H43A sing N N 48 4PS S44 HS44 sing N N 49 ACT C O doub N N 50 ACT C OXT sing N N 51 ACT C CH3 sing N N 52 ACT CH3 H1 sing N N 53 ACT CH3 H2 sing N N 54 ACT CH3 H3 sing N N 55 ADE N9 C8 sing Y N 56 ADE N9 C4 sing Y N 57 ADE N9 HN9 sing N N 58 ADE C8 N7 doub Y N 59 ADE C8 H8 sing N N 60 ADE N7 C5 sing Y N 61 ADE C5 C6 sing Y N 62 ADE C5 C4 doub Y N 63 ADE C6 N6 sing N N 64 ADE C6 N1 doub Y N 65 ADE N6 HN61 sing N N 66 ADE N6 HN62 sing N N 67 ADE N1 C2 sing Y N 68 ADE C2 N3 doub Y N 69 ADE C2 H2 sing N N 70 ADE N3 C4 sing Y N 71 ALA N CA sing N N 72 ALA N H sing N N 73 ALA N H2 sing N N 74 ALA CA C sing N N 75 ALA CA CB sing N N 76 ALA CA HA sing N N 77 ALA C O doub N N 78 ALA C OXT sing N N 79 ALA CB HB1 sing N N 80 ALA CB HB2 sing N N 81 ALA CB HB3 sing N N 82 ALA OXT HXT sing N N 83 ARG N CA sing N N 84 ARG N H sing N N 85 ARG N H2 sing N N 86 ARG CA C sing N N 87 ARG CA CB sing N N 88 ARG CA HA sing N N 89 ARG C O doub N N 90 ARG C OXT sing N N 91 ARG CB CG sing N N 92 ARG CB HB2 sing N N 93 ARG CB HB3 sing N N 94 ARG CG CD sing N N 95 ARG CG HG2 sing N N 96 ARG CG HG3 sing N N 97 ARG CD NE sing N N 98 ARG CD HD2 sing N N 99 ARG CD HD3 sing N N 100 ARG NE CZ sing N N 101 ARG NE HE sing N N 102 ARG CZ NH1 sing N N 103 ARG CZ NH2 doub N N 104 ARG NH1 HH11 sing N N 105 ARG NH1 HH12 sing N N 106 ARG NH2 HH21 sing N N 107 ARG NH2 HH22 sing N N 108 ARG OXT HXT sing N N 109 ASN N CA sing N N 110 ASN N H sing N N 111 ASN N H2 sing N N 112 ASN CA C sing N N 113 ASN CA CB sing N N 114 ASN CA HA sing N N 115 ASN C O doub N N 116 ASN C OXT sing N N 117 ASN CB CG sing N N 118 ASN CB HB2 sing N N 119 ASN CB HB3 sing N N 120 ASN CG OD1 doub N N 121 ASN CG ND2 sing N N 122 ASN ND2 HD21 sing N N 123 ASN ND2 HD22 sing N N 124 ASN OXT HXT sing N N 125 ASP N CA sing N N 126 ASP N H sing N N 127 ASP N H2 sing N N 128 ASP CA C sing N N 129 ASP CA CB sing N N 130 ASP CA HA sing N N 131 ASP C O doub N N 132 ASP C OXT sing N N 133 ASP CB CG sing N N 134 ASP CB HB2 sing N N 135 ASP CB HB3 sing N N 136 ASP CG OD1 doub N N 137 ASP CG OD2 sing N N 138 ASP OD2 HD2 sing N N 139 ASP OXT HXT sing N N 140 GLN N CA sing N N 141 GLN N H sing N N 142 GLN N H2 sing N N 143 GLN CA C sing N N 144 GLN CA CB sing N N 145 GLN CA HA sing N N 146 GLN C O doub N N 147 GLN C OXT sing N N 148 GLN CB CG sing N N 149 GLN CB HB2 sing N N 150 GLN CB HB3 sing N N 151 GLN CG CD sing N N 152 GLN CG HG2 sing N N 153 GLN CG HG3 sing N N 154 GLN CD OE1 doub N N 155 GLN CD NE2 sing N N 156 GLN NE2 HE21 sing N N 157 GLN NE2 HE22 sing N N 158 GLN OXT HXT sing N N 159 GLU N CA sing N N 160 GLU N H sing N N 161 GLU N H2 sing N N 162 GLU CA C sing N N 163 GLU CA CB sing N N 164 GLU CA HA sing N N 165 GLU C O doub N N 166 GLU C OXT sing N N 167 GLU CB CG sing N N 168 GLU CB HB2 sing N N 169 GLU CB HB3 sing N N 170 GLU CG CD sing N N 171 GLU CG HG2 sing N N 172 GLU CG HG3 sing N N 173 GLU CD OE1 doub N N 174 GLU CD OE2 sing N N 175 GLU OE2 HE2 sing N N 176 GLU OXT HXT sing N N 177 GLY N CA sing N N 178 GLY N H sing N N 179 GLY N H2 sing N N 180 GLY CA C sing N N 181 GLY CA HA2 sing N N 182 GLY CA HA3 sing N N 183 GLY C O doub N N 184 GLY C OXT sing N N 185 GLY OXT HXT sing N N 186 HIS N CA sing N N 187 HIS N H sing N N 188 HIS N H2 sing N N 189 HIS CA C sing N N 190 HIS CA CB sing N N 191 HIS CA HA sing N N 192 HIS C O doub N N 193 HIS C OXT sing N N 194 HIS CB CG sing N N 195 HIS CB HB2 sing N N 196 HIS CB HB3 sing N N 197 HIS CG ND1 sing Y N 198 HIS CG CD2 doub Y N 199 HIS ND1 CE1 doub Y N 200 HIS ND1 HD1 sing N N 201 HIS CD2 NE2 sing Y N 202 HIS CD2 HD2 sing N N 203 HIS CE1 NE2 sing Y N 204 HIS CE1 HE1 sing N N 205 HIS NE2 HE2 sing N N 206 HIS OXT HXT sing N N 207 HOH O H1 sing N N 208 HOH O H2 sing N N 209 ILE N CA sing N N 210 ILE N H sing N N 211 ILE N H2 sing N N 212 ILE CA C sing N N 213 ILE CA CB sing N N 214 ILE CA HA sing N N 215 ILE C O doub N N 216 ILE C OXT sing N N 217 ILE CB CG1 sing N N 218 ILE CB CG2 sing N N 219 ILE CB HB sing N N 220 ILE CG1 CD1 sing N N 221 ILE CG1 HG12 sing N N 222 ILE CG1 HG13 sing N N 223 ILE CG2 HG21 sing N N 224 ILE CG2 HG22 sing N N 225 ILE CG2 HG23 sing N N 226 ILE CD1 HD11 sing N N 227 ILE CD1 HD12 sing N N 228 ILE CD1 HD13 sing N N 229 ILE OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 MET N CA sing N N 276 MET N H sing N N 277 MET N H2 sing N N 278 MET CA C sing N N 279 MET CA CB sing N N 280 MET CA HA sing N N 281 MET C O doub N N 282 MET C OXT sing N N 283 MET CB CG sing N N 284 MET CB HB2 sing N N 285 MET CB HB3 sing N N 286 MET CG SD sing N N 287 MET CG HG2 sing N N 288 MET CG HG3 sing N N 289 MET SD CE sing N N 290 MET CE HE1 sing N N 291 MET CE HE2 sing N N 292 MET CE HE3 sing N N 293 MET OXT HXT sing N N 294 PG4 O1 C1 sing N N 295 PG4 O1 HO1 sing N N 296 PG4 C1 C2 sing N N 297 PG4 C1 H11 sing N N 298 PG4 C1 H12 sing N N 299 PG4 C2 O2 sing N N 300 PG4 C2 H21 sing N N 301 PG4 C2 H22 sing N N 302 PG4 O2 C3 sing N N 303 PG4 C3 C4 sing N N 304 PG4 C3 H31 sing N N 305 PG4 C3 H32 sing N N 306 PG4 C4 O3 sing N N 307 PG4 C4 H41 sing N N 308 PG4 C4 H42 sing N N 309 PG4 O3 C5 sing N N 310 PG4 C5 C6 sing N N 311 PG4 C5 H51 sing N N 312 PG4 C5 H52 sing N N 313 PG4 C6 O4 sing N N 314 PG4 C6 H61 sing N N 315 PG4 C6 H62 sing N N 316 PG4 O4 C7 sing N N 317 PG4 C7 C8 sing N N 318 PG4 C7 H71 sing N N 319 PG4 C7 H72 sing N N 320 PG4 C8 O5 sing N N 321 PG4 C8 H81 sing N N 322 PG4 C8 H82 sing N N 323 PG4 O5 HO5 sing N N 324 PHE N CA sing N N 325 PHE N H sing N N 326 PHE N H2 sing N N 327 PHE CA C sing N N 328 PHE CA CB sing N N 329 PHE CA HA sing N N 330 PHE C O doub N N 331 PHE C OXT sing N N 332 PHE CB CG sing N N 333 PHE CB HB2 sing N N 334 PHE CB HB3 sing N N 335 PHE CG CD1 doub Y N 336 PHE CG CD2 sing Y N 337 PHE CD1 CE1 sing Y N 338 PHE CD1 HD1 sing N N 339 PHE CD2 CE2 doub Y N 340 PHE CD2 HD2 sing N N 341 PHE CE1 CZ doub Y N 342 PHE CE1 HE1 sing N N 343 PHE CE2 CZ sing Y N 344 PHE CE2 HE2 sing N N 345 PHE CZ HZ sing N N 346 PHE OXT HXT sing N N 347 PRO N CA sing N N 348 PRO N CD sing N N 349 PRO N H sing N N 350 PRO CA C sing N N 351 PRO CA CB sing N N 352 PRO CA HA sing N N 353 PRO C O doub N N 354 PRO C OXT sing N N 355 PRO CB CG sing N N 356 PRO CB HB2 sing N N 357 PRO CB HB3 sing N N 358 PRO CG CD sing N N 359 PRO CG HG2 sing N N 360 PRO CG HG3 sing N N 361 PRO CD HD2 sing N N 362 PRO CD HD3 sing N N 363 PRO OXT HXT sing N N 364 SER N CA sing N N 365 SER N H sing N N 366 SER N H2 sing N N 367 SER CA C sing N N 368 SER CA CB sing N N 369 SER CA HA sing N N 370 SER C O doub N N 371 SER C OXT sing N N 372 SER CB OG sing N N 373 SER CB HB2 sing N N 374 SER CB HB3 sing N N 375 SER OG HG sing N N 376 SER OXT HXT sing N N 377 SO4 S O1 doub N N 378 SO4 S O2 doub N N 379 SO4 S O3 sing N N 380 SO4 S O4 sing N N 381 THR N CA sing N N 382 THR N H sing N N 383 THR N H2 sing N N 384 THR CA C sing N N 385 THR CA CB sing N N 386 THR CA HA sing N N 387 THR C O doub N N 388 THR C OXT sing N N 389 THR CB OG1 sing N N 390 THR CB CG2 sing N N 391 THR CB HB sing N N 392 THR OG1 HG1 sing N N 393 THR CG2 HG21 sing N N 394 THR CG2 HG22 sing N N 395 THR CG2 HG23 sing N N 396 THR OXT HXT sing N N 397 TRP N CA sing N N 398 TRP N H sing N N 399 TRP N H2 sing N N 400 TRP CA C sing N N 401 TRP CA CB sing N N 402 TRP CA HA sing N N 403 TRP C O doub N N 404 TRP C OXT sing N N 405 TRP CB CG sing N N 406 TRP CB HB2 sing N N 407 TRP CB HB3 sing N N 408 TRP CG CD1 doub Y N 409 TRP CG CD2 sing Y N 410 TRP CD1 NE1 sing Y N 411 TRP CD1 HD1 sing N N 412 TRP CD2 CE2 doub Y N 413 TRP CD2 CE3 sing Y N 414 TRP NE1 CE2 sing Y N 415 TRP NE1 HE1 sing N N 416 TRP CE2 CZ2 sing Y N 417 TRP CE3 CZ3 doub Y N 418 TRP CE3 HE3 sing N N 419 TRP CZ2 CH2 doub Y N 420 TRP CZ2 HZ2 sing N N 421 TRP CZ3 CH2 sing Y N 422 TRP CZ3 HZ3 sing N N 423 TRP CH2 HH2 sing N N 424 TRP OXT HXT sing N N 425 TYR N CA sing N N 426 TYR N H sing N N 427 TYR N H2 sing N N 428 TYR CA C sing N N 429 TYR CA CB sing N N 430 TYR CA HA sing N N 431 TYR C O doub N N 432 TYR C OXT sing N N 433 TYR CB CG sing N N 434 TYR CB HB2 sing N N 435 TYR CB HB3 sing N N 436 TYR CG CD1 doub Y N 437 TYR CG CD2 sing Y N 438 TYR CD1 CE1 sing Y N 439 TYR CD1 HD1 sing N N 440 TYR CD2 CE2 doub Y N 441 TYR CD2 HD2 sing N N 442 TYR CE1 CZ doub Y N 443 TYR CE1 HE1 sing N N 444 TYR CE2 CZ sing Y N 445 TYR CE2 HE2 sing N N 446 TYR CZ OH sing N N 447 TYR OH HH sing N N 448 TYR OXT HXT sing N N 449 VAL N CA sing N N 450 VAL N H sing N N 451 VAL N H2 sing N N 452 VAL CA C sing N N 453 VAL CA CB sing N N 454 VAL CA HA sing N N 455 VAL C O doub N N 456 VAL C OXT sing N N 457 VAL CB CG1 sing N N 458 VAL CB CG2 sing N N 459 VAL CB HB sing N N 460 VAL CG1 HG11 sing N N 461 VAL CG1 HG12 sing N N 462 VAL CG1 HG13 sing N N 463 VAL CG2 HG21 sing N N 464 VAL CG2 HG22 sing N N 465 VAL CG2 HG23 sing N N 466 VAL OXT HXT sing N N 467 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;4'-diphospho pantetheine ; 4PS 3 ADENINE ADE 4 'TETRAETHYLENE GLYCOL' PG4 5 'ACETATE ION' ACT 6 'SULFATE ION' SO4 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3IKZ _pdbx_initial_refinement_model.details ? #