data_3KA5 # _entry.id 3KA5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KA5 RCSB RCSB055738 WWPDB D_1000055738 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id CaR123A _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KA5 _pdbx_database_status.recvd_initial_deposition_date 2009-10-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Seetharaman, J.' 1 'Neely, H.' 2 'Wang, D.' 3 'Janjua, H.' 4 'Cunningham, K.' 5 'Owens, L.' 6 'Xiao, R.' 7 'Liu, J.' 8 'Baran, M.C.' 9 'Acton, T.B.' 10 'Rost, B.' 11 'Montelione, G.T.' 12 'Hunt, J.F.' 13 'Tong, L.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'Crystal structure of Ribosome-associated protein Y (PSrp-1) from Clostridium acetobutylicum' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Seetharaman, J.' 1 primary 'Neely, H.' 2 primary 'Wang, D.' 3 primary 'Janjua, H.' 4 primary 'Cunningham, K.' 5 primary 'Owens, L.' 6 primary 'Xiao, R.' 7 primary 'Liu, J.' 8 primary 'Baran, M.C.' 9 primary 'Acton, T.B.' 10 primary 'Rost, B.' 11 primary 'Montelione, G.T.' 12 primary 'Hunt, J.F.' 13 primary 'Tong, L.' 14 # _cell.entry_id 3KA5 _cell.length_a 49.693 _cell.length_b 49.693 _cell.length_c 98.382 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KA5 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribosome-associated protein Y (PSrp-1)' 7776.408 2 ? ? 'sequence database residues 117-173' ? 2 water nat water 18.015 86 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'EIVKTKRFAIKP(MSE)SEEEAVLE(MSE)ELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPELEHHHHHH' _entity_poly.pdbx_seq_one_letter_code_can EIVKTKRFAIKPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPELEHHHHHH _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CaR123A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ILE n 1 3 VAL n 1 4 LYS n 1 5 THR n 1 6 LYS n 1 7 ARG n 1 8 PHE n 1 9 ALA n 1 10 ILE n 1 11 LYS n 1 12 PRO n 1 13 MSE n 1 14 SER n 1 15 GLU n 1 16 GLU n 1 17 GLU n 1 18 ALA n 1 19 VAL n 1 20 LEU n 1 21 GLU n 1 22 MSE n 1 23 GLU n 1 24 LEU n 1 25 LEU n 1 26 GLY n 1 27 HIS n 1 28 ASN n 1 29 PHE n 1 30 PHE n 1 31 VAL n 1 32 PHE n 1 33 GLN n 1 34 ASN n 1 35 GLY n 1 36 ASP n 1 37 SER n 1 38 ASN n 1 39 GLU n 1 40 VAL n 1 41 ASN n 1 42 VAL n 1 43 VAL n 1 44 TYR n 1 45 LYS n 1 46 ARG n 1 47 LYS n 1 48 ASP n 1 49 GLY n 1 50 ASN n 1 51 TYR n 1 52 GLY n 1 53 LEU n 1 54 ILE n 1 55 GLU n 1 56 PRO n 1 57 GLU n 1 58 LEU n 1 59 GLU n 1 60 HIS n 1 61 HIS n 1 62 HIS n 1 63 HIS n 1 64 HIS n 1 65 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CA_C2847, Ordered Locus Names: CA_C2847' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium acetobutylicum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1488 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q97F93_CLOAB _struct_ref.pdbx_db_accession Q97F93 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EIVKTKRFAIKPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPE _struct_ref.pdbx_align_begin 117 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KA5 A 1 ? 57 ? Q97F93 117 ? 173 ? 1 57 2 1 3KA5 B 1 ? 57 ? Q97F93 117 ? 173 ? 1 57 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KA5 LEU A 58 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 58 1 1 3KA5 GLU A 59 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 59 2 1 3KA5 HIS A 60 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 60 3 1 3KA5 HIS A 61 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 61 4 1 3KA5 HIS A 62 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 62 5 1 3KA5 HIS A 63 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 63 6 1 3KA5 HIS A 64 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 64 7 1 3KA5 HIS A 65 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 65 8 2 3KA5 LEU B 58 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 58 9 2 3KA5 GLU B 59 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 59 10 2 3KA5 HIS B 60 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 60 11 2 3KA5 HIS B 61 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 61 12 2 3KA5 HIS B 62 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 62 13 2 3KA5 HIS B 63 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 63 14 2 3KA5 HIS B 64 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 64 15 2 3KA5 HIS B 65 ? UNP Q97F93 ? ? 'EXPRESSION TAG' 65 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KA5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_details '0.1M KSCN, 0.1M Na3Citrate pH 4.2, 20% PEG 4K, microbatch under oil method, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2009-10-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 3KA5 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.8 _reflns.number_obs 24939 _reflns.number_all 24939 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.9 _reflns.B_iso_Wilson_estimate 15.6 _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.83 _reflns_shell.percent_possible_all 91.4 _reflns_shell.Rmerge_I_obs 0.395 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1154 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3KA5 _refine.ls_number_reflns_obs 24060 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 151523.95 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.39 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 95.9 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1174 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 25.9 _refine.aniso_B[1][1] 1.99 _refine.aniso_B[2][2] 1.99 _refine.aniso_B[3][3] -3.99 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 44.309 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3KA5 _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.25 _refine_analyze.Luzzati_sigma_a_free 0.14 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 945 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 1031 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 32.39 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.5 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.65 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work 3394 _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.percent_reflns_obs 83.2 _refine_ls_shell.R_factor_R_free 0.281 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 4.1 _refine_ls_shell.number_reflns_R_free 144 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3KA5 _struct.title ;Crystal structure of Ribosome-associated protein Y (PSrp-1) from Clostridium acetobutylicum. Northeast Structural Genomics Consortium target id CaR123A ; _struct.pdbx_descriptor 'Ribosome-associated protein Y (PSrp-1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KA5 _struct_keywords.pdbx_keywords CHAPERONE _struct_keywords.text ;Ribosome-associated protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, CHAPERONE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? GLY A 26 ? SER A 14 GLY A 26 1 ? 13 HELX_P HELX_P2 2 SER B 14 ? GLY B 26 ? SER B 14 GLY B 26 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PRO 12 C ? ? ? 1_555 A MSE 13 N ? ? A PRO 12 A MSE 13 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 13 C ? ? ? 1_555 A SER 14 N ? ? A MSE 13 A SER 14 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A GLU 21 C ? ? ? 1_555 A MSE 22 N ? ? A GLU 21 A MSE 22 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 22 C ? ? ? 1_555 A GLU 23 N ? ? A MSE 22 A GLU 23 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? B PRO 12 C ? ? ? 1_555 B MSE 13 N ? ? B PRO 12 B MSE 13 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? B MSE 13 C ? ? ? 1_555 B SER 14 N ? ? B MSE 13 B SER 14 1_555 ? ? ? ? ? ? ? 1.329 ? covale7 covale ? ? B GLU 21 C ? ? ? 1_555 B MSE 22 N ? ? B GLU 21 B MSE 22 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? B MSE 22 C ? ? ? 1_555 B GLU 23 N ? ? B MSE 22 B GLU 23 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 2 ? LYS A 6 ? ILE A 2 LYS A 6 A 2 TYR B 51 ? GLU B 55 ? TYR B 51 GLU B 55 A 3 GLU B 39 ? LYS B 45 ? GLU B 39 LYS B 45 A 4 PHE B 29 ? ASN B 34 ? PHE B 29 ASN B 34 B 1 PHE A 29 ? ASN A 34 ? PHE A 29 ASN A 34 B 2 GLU A 39 ? LYS A 45 ? GLU A 39 LYS A 45 B 3 TYR A 51 ? GLU A 55 ? TYR A 51 GLU A 55 B 4 ILE B 2 ? LYS B 6 ? ILE B 2 LYS B 6 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 3 O TYR B 51 ? O TYR B 51 A 2 3 O ILE B 54 ? O ILE B 54 N VAL B 42 ? N VAL B 42 A 3 4 O GLU B 39 ? O GLU B 39 N ASN B 34 ? N ASN B 34 B 1 2 N PHE A 32 ? N PHE A 32 O ASN A 41 ? O ASN A 41 B 2 3 N TYR A 44 ? N TYR A 44 O GLY A 52 ? O GLY A 52 B 3 4 N TYR A 51 ? N TYR A 51 O VAL B 3 ? O VAL B 3 # _database_PDB_matrix.entry_id 3KA5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KA5 _atom_sites.fract_transf_matrix[1][1] 0.020124 _atom_sites.fract_transf_matrix[1][2] 0.011618 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023237 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010164 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 MSE 13 13 13 MSE MSE A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 MSE 22 22 22 MSE MSE A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LEU 58 58 ? ? ? A . n A 1 59 GLU 59 59 ? ? ? A . n A 1 60 HIS 60 60 ? ? ? A . n A 1 61 HIS 61 61 ? ? ? A . n A 1 62 HIS 62 62 ? ? ? A . n A 1 63 HIS 63 63 ? ? ? A . n A 1 64 HIS 64 64 ? ? ? A . n A 1 65 HIS 65 65 ? ? ? A . n B 1 1 GLU 1 1 1 GLU GLU B . n B 1 2 ILE 2 2 2 ILE ILE B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 ALA 9 9 9 ALA ALA B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 PRO 12 12 12 PRO PRO B . n B 1 13 MSE 13 13 13 MSE MSE B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 ALA 18 18 18 ALA ALA B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 MSE 22 22 22 MSE MSE B . n B 1 23 GLU 23 23 23 GLU GLU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 HIS 27 27 27 HIS HIS B . n B 1 28 ASN 28 28 28 ASN ASN B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 GLN 33 33 33 GLN GLN B . n B 1 34 ASN 34 34 34 ASN ASN B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 ASN 38 38 38 ASN ASN B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 TYR 44 44 44 TYR TYR B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ARG 46 46 46 ARG ARG B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ASN 50 50 50 ASN ASN B . n B 1 51 TYR 51 51 51 TYR TYR B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 GLU 59 59 59 GLU GLU B . n B 1 60 HIS 60 60 ? ? ? B . n B 1 61 HIS 61 61 ? ? ? B . n B 1 62 HIS 62 62 ? ? ? B . n B 1 63 HIS 63 63 ? ? ? B . n B 1 64 HIS 64 64 ? ? ? B . n B 1 65 HIS 65 65 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 13 A MSE 13 ? MET SELENOMETHIONINE 2 A MSE 22 A MSE 22 ? MET SELENOMETHIONINE 3 B MSE 13 B MSE 13 ? MET SELENOMETHIONINE 4 B MSE 22 B MSE 22 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2410 ? 1 MORE -15 ? 1 'SSA (A^2)' 7270 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-03 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXS phasing . ? 1 CNS refinement 1.2 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 47 ? ? -67.15 17.40 2 1 LYS B 47 ? ? -62.44 80.25 3 1 ASP B 48 ? ? -171.12 -9.55 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 58 ? A LEU 58 2 1 Y 1 A GLU 59 ? A GLU 59 3 1 Y 1 A HIS 60 ? A HIS 60 4 1 Y 1 A HIS 61 ? A HIS 61 5 1 Y 1 A HIS 62 ? A HIS 62 6 1 Y 1 A HIS 63 ? A HIS 63 7 1 Y 1 A HIS 64 ? A HIS 64 8 1 Y 1 A HIS 65 ? A HIS 65 9 1 Y 1 B HIS 60 ? B HIS 60 10 1 Y 1 B HIS 61 ? B HIS 61 11 1 Y 1 B HIS 62 ? B HIS 62 12 1 Y 1 B HIS 63 ? B HIS 63 13 1 Y 1 B HIS 64 ? B HIS 64 14 1 Y 1 B HIS 65 ? B HIS 65 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 66 66 HOH TIP A . C 2 HOH 2 67 67 HOH TIP A . C 2 HOH 3 68 2 HOH TIP A . C 2 HOH 4 69 3 HOH TIP A . C 2 HOH 5 70 70 HOH TIP A . C 2 HOH 6 71 4 HOH TIP A . C 2 HOH 7 73 73 HOH TIP A . C 2 HOH 8 74 74 HOH TIP A . C 2 HOH 9 75 9 HOH TIP A . C 2 HOH 10 76 10 HOH TIP A . C 2 HOH 11 77 77 HOH TIP A . C 2 HOH 12 78 78 HOH TIP A . C 2 HOH 13 79 79 HOH TIP A . C 2 HOH 14 80 13 HOH TIP A . C 2 HOH 15 81 15 HOH TIP A . C 2 HOH 16 82 82 HOH TIP A . C 2 HOH 17 83 83 HOH TIP A . C 2 HOH 18 84 17 HOH TIP A . C 2 HOH 19 85 85 HOH TIP A . C 2 HOH 20 86 86 HOH TIP A . C 2 HOH 21 87 18 HOH TIP A . C 2 HOH 22 88 24 HOH TIP A . C 2 HOH 23 89 25 HOH TIP A . C 2 HOH 24 90 28 HOH TIP A . C 2 HOH 25 91 30 HOH TIP A . C 2 HOH 26 92 32 HOH TIP A . C 2 HOH 27 93 35 HOH TIP A . C 2 HOH 28 94 36 HOH TIP A . C 2 HOH 29 95 37 HOH TIP A . C 2 HOH 30 96 40 HOH TIP A . C 2 HOH 31 97 42 HOH TIP A . C 2 HOH 32 98 43 HOH TIP A . C 2 HOH 33 99 45 HOH TIP A . C 2 HOH 34 100 46 HOH TIP A . C 2 HOH 35 101 47 HOH TIP A . C 2 HOH 36 102 48 HOH TIP A . C 2 HOH 37 103 51 HOH TIP A . C 2 HOH 38 104 52 HOH TIP A . C 2 HOH 39 105 56 HOH TIP A . C 2 HOH 40 106 58 HOH TIP A . C 2 HOH 41 107 61 HOH TIP A . C 2 HOH 42 108 62 HOH TIP A . C 2 HOH 43 109 63 HOH TIP A . C 2 HOH 44 110 64 HOH TIP A . D 2 HOH 1 66 1 HOH TIP B . D 2 HOH 2 67 5 HOH TIP B . D 2 HOH 3 68 68 HOH TIP B . D 2 HOH 4 69 69 HOH TIP B . D 2 HOH 5 70 7 HOH TIP B . D 2 HOH 6 71 71 HOH TIP B . D 2 HOH 7 72 6 HOH TIP B . D 2 HOH 8 73 8 HOH TIP B . D 2 HOH 9 74 11 HOH TIP B . D 2 HOH 10 75 75 HOH TIP B . D 2 HOH 11 76 76 HOH TIP B . D 2 HOH 12 77 12 HOH TIP B . D 2 HOH 13 78 14 HOH TIP B . D 2 HOH 14 79 16 HOH TIP B . D 2 HOH 15 80 80 HOH TIP B . D 2 HOH 16 81 81 HOH TIP B . D 2 HOH 17 82 19 HOH TIP B . D 2 HOH 18 83 20 HOH TIP B . D 2 HOH 19 84 84 HOH TIP B . D 2 HOH 20 85 21 HOH TIP B . D 2 HOH 21 86 22 HOH TIP B . D 2 HOH 22 87 23 HOH TIP B . D 2 HOH 23 88 26 HOH TIP B . D 2 HOH 24 89 27 HOH TIP B . D 2 HOH 25 90 29 HOH TIP B . D 2 HOH 26 91 31 HOH TIP B . D 2 HOH 27 92 33 HOH TIP B . D 2 HOH 28 93 34 HOH TIP B . D 2 HOH 29 94 38 HOH TIP B . D 2 HOH 30 95 39 HOH TIP B . D 2 HOH 31 96 41 HOH TIP B . D 2 HOH 32 97 44 HOH TIP B . D 2 HOH 33 98 49 HOH TIP B . D 2 HOH 34 99 50 HOH TIP B . D 2 HOH 35 100 53 HOH TIP B . D 2 HOH 36 101 54 HOH TIP B . D 2 HOH 37 102 55 HOH TIP B . D 2 HOH 38 103 57 HOH TIP B . D 2 HOH 39 104 59 HOH TIP B . D 2 HOH 40 105 60 HOH TIP B . D 2 HOH 41 106 65 HOH TIP B . D 2 HOH 42 107 72 HOH TIP B . #