data_3KET # _entry.id 3KET # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KET pdb_00003ket 10.2210/pdb3ket/pdb NDB NA0255 ? ? RCSB RCSB055902 ? ? WWPDB D_1000055902 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KEQ 'Structure and functional properties of the Streptococcus agalactiae transcriptional repressor Rex' unspecified PDB 3KEO 'Structure and functional properties of the Streptococcus agalactiae transcriptional repressor Rex' unspecified PDB 2vt3 'Structure and functional properties of the Bacillus subtilis transcriptional repressor Rex' unspecified PDB 2dt5 'Crystal structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KET _pdbx_database_status.recvd_initial_deposition_date 2009-10-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thiyagarajan, S.' 1 'Logan, D.' 2 'von Wachenfeldt, C.' 3 # _citation.id primary _citation.title 'NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 17 _citation.page_first e1009791 _citation.page_last e1009791 _citation.year 2021 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7374 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 34370789 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1009791 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Franza, T.' 1 ? primary 'Rogstam, A.' 2 ? primary 'Thiyagarajan, S.' 3 0000-0001-6960-2729 primary 'Sullivan, M.J.' 4 0000-0003-2276-3132 primary 'Derre-Bobillot, A.' 5 ? primary 'Bauer, M.C.' 6 ? primary 'Goh, K.G.K.' 7 0000-0001-8347-2043 primary 'Da Cunha, V.' 8 0000-0002-9035-7825 primary 'Glaser, P.' 9 ? primary 'Logan, D.T.' 10 0000-0002-0098-8560 primary 'Ulett, G.C.' 11 0000-0002-9638-8091 primary 'von Wachenfeldt, C.' 12 0000-0001-8950-3218 primary 'Gaudu, P.' 13 ? # _cell.entry_id 3KET _cell.length_a 48.720 _cell.length_b 107.030 _cell.length_c 153.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KET _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Redox-sensing transcriptional repressor rex' 23850.359 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*AP*AP*T)-3') ; 3396.259 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*AP*TP*TP*TP*CP*AP*CP*AP*AP*TP*T)-3') ; 3307.197 1 ? ? ? ? 4 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 water nat water 18.015 119 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILN DHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTE AQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR ; ;MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILN DHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTE AQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR ; A ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DT)(DT)(DG)(DT)(DG)(DA)(DA)(DA)(DT)' AATTGTGAAAT B ? 3 polydeoxyribonucleotide no no '(DA)(DT)(DT)(DT)(DC)(DA)(DC)(DA)(DA)(DT)(DT)' ATTTCACAATT C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 MET n 1 4 ASP n 1 5 LYS n 1 6 SER n 1 7 ILE n 1 8 PRO n 1 9 LYS n 1 10 ALA n 1 11 THR n 1 12 ALA n 1 13 LYS n 1 14 ARG n 1 15 LEU n 1 16 SER n 1 17 LEU n 1 18 TYR n 1 19 TYR n 1 20 ARG n 1 21 ILE n 1 22 PHE n 1 23 LYS n 1 24 ARG n 1 25 PHE n 1 26 ASN n 1 27 THR n 1 28 ASP n 1 29 GLY n 1 30 ILE n 1 31 GLU n 1 32 LYS n 1 33 ALA n 1 34 SER n 1 35 SER n 1 36 LYS n 1 37 GLN n 1 38 ILE n 1 39 ALA n 1 40 ASP n 1 41 ALA n 1 42 LEU n 1 43 GLY n 1 44 ILE n 1 45 ASP n 1 46 SER n 1 47 ALA n 1 48 THR n 1 49 VAL n 1 50 ARG n 1 51 ARG n 1 52 ASP n 1 53 PHE n 1 54 SER n 1 55 TYR n 1 56 PHE n 1 57 GLY n 1 58 GLU n 1 59 LEU n 1 60 GLY n 1 61 ARG n 1 62 ARG n 1 63 GLY n 1 64 PHE n 1 65 GLY n 1 66 TYR n 1 67 ASP n 1 68 VAL n 1 69 LYS n 1 70 LYS n 1 71 LEU n 1 72 MET n 1 73 ASN n 1 74 PHE n 1 75 PHE n 1 76 ALA n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 ASN n 1 81 ASP n 1 82 HIS n 1 83 SER n 1 84 THR n 1 85 THR n 1 86 ASN n 1 87 VAL n 1 88 MET n 1 89 LEU n 1 90 VAL n 1 91 GLY n 1 92 CYS n 1 93 GLY n 1 94 ASN n 1 95 ILE n 1 96 GLY n 1 97 ARG n 1 98 ALA n 1 99 LEU n 1 100 LEU n 1 101 HIS n 1 102 TYR n 1 103 ARG n 1 104 PHE n 1 105 HIS n 1 106 ASP n 1 107 ARG n 1 108 ASN n 1 109 LYS n 1 110 MET n 1 111 GLN n 1 112 ILE n 1 113 SER n 1 114 MET n 1 115 ALA n 1 116 PHE n 1 117 ASP n 1 118 LEU n 1 119 ASP n 1 120 SER n 1 121 ASN n 1 122 ASP n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 LYS n 1 127 THR n 1 128 THR n 1 129 GLU n 1 130 ASP n 1 131 GLY n 1 132 ILE n 1 133 PRO n 1 134 VAL n 1 135 TYR n 1 136 GLY n 1 137 ILE n 1 138 SER n 1 139 THR n 1 140 ILE n 1 141 ASN n 1 142 ASP n 1 143 HIS n 1 144 LEU n 1 145 ILE n 1 146 ASP n 1 147 SER n 1 148 ASP n 1 149 ILE n 1 150 GLU n 1 151 THR n 1 152 ALA n 1 153 ILE n 1 154 LEU n 1 155 THR n 1 156 VAL n 1 157 PRO n 1 158 SER n 1 159 THR n 1 160 GLU n 1 161 ALA n 1 162 GLN n 1 163 GLU n 1 164 VAL n 1 165 ALA n 1 166 ASP n 1 167 ILE n 1 168 LEU n 1 169 VAL n 1 170 LYS n 1 171 ALA n 1 172 GLY n 1 173 ILE n 1 174 LYS n 1 175 GLY n 1 176 ILE n 1 177 LEU n 1 178 SER n 1 179 PHE n 1 180 SER n 1 181 PRO n 1 182 VAL n 1 183 HIS n 1 184 LEU n 1 185 THR n 1 186 LEU n 1 187 PRO n 1 188 LYS n 1 189 ASP n 1 190 ILE n 1 191 ILE n 1 192 VAL n 1 193 GLN n 1 194 TYR n 1 195 VAL n 1 196 ASP n 1 197 LEU n 1 198 THR n 1 199 SER n 1 200 GLU n 1 201 LEU n 1 202 GLN n 1 203 THR n 1 204 LEU n 1 205 LEU n 1 206 TYR n 1 207 PHE n 1 208 MET n 1 209 ASN n 1 210 GLN n 1 211 GLN n 1 212 ARG n 2 1 DA n 2 2 DA n 2 3 DT n 2 4 DT n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DA n 2 9 DA n 2 10 DA n 2 11 DT n 3 1 DA n 3 2 DT n 3 3 DT n 3 4 DT n 3 5 DC n 3 6 DA n 3 7 DC n 3 8 DA n 3 9 DA n 3 10 DT n 3 11 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gbs1167, rex' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NEM316 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae serogroup III' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 216495 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'TUNER (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET101 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 'Nucleotide synthesis' 3 1 sample ? ? 'synthetic construct' ? 32630 'Nucleotide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP REX_STRA3 Q8E565 1 ;MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILN DHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTE AQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR ; 1 ? 2 PDB 3KET 3KET 2 ? ? ? 3 PDB 3KET 3KET 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KET A 1 ? 212 ? Q8E565 1 ? 212 ? 1 212 2 2 3KET B 1 ? 11 ? 3KET 1 ? 11 ? 1 11 3 3 3KET C 1 ? 11 ? 3KET 34 ? 44 ? 34 44 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KET _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.28 _exptl_crystal.density_percent_sol 62.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '22 % PEG 1500, 50mM MIB, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2009-09-03 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bent Si (111) crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0379 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0379 # _reflns.entry_id 3KET _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 29.49 _reflns.d_resolution_high 2.4 _reflns.number_obs 16157 _reflns.number_all 16223 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.106 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.67 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.46 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs 0.46 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.04 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3KET _refine.ls_number_reflns_obs 14638 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.49 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 95.15 _refine.ls_R_factor_obs 0.19757 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19487 _refine.ls_R_factor_R_free 0.24718 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 784 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.902 _refine.B_iso_mean 32.429 _refine.aniso_B[1][1] 0.02 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model '3KEO and a fiber model double stranded B-DNA of length 11 base pairs' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.298 _refine.pdbx_overall_ESU_R_Free 0.238 _refine.overall_SU_ML 0.164 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 13.041 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1613 _refine_hist.pdbx_number_atoms_nucleic_acid 431 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 119 _refine_hist.number_atoms_total 2208 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 29.49 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 2171 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1315 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.203 2.242 ? 3029 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.095 3.000 ? 3230 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.560 5.000 ? 204 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.311 24.054 ? 74 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.457 15.000 ? 293 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.275 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.151 0.200 ? 348 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 2058 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 386 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.869 1.500 ? 1015 'X-RAY DIFFRACTION' ? r_mcbond_other 0.190 1.500 ? 418 'X-RAY DIFFRACTION' ? r_mcangle_it 1.675 2.000 ? 1642 'X-RAY DIFFRACTION' ? r_scbond_it 2.362 3.000 ? 1156 'X-RAY DIFFRACTION' ? r_scangle_it 3.450 4.500 ? 1387 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 1089 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 98.30 _refine_ls_shell.R_factor_R_free 0.379 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3KET _struct.title 'Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KET _struct_keywords.pdbx_keywords Transcription/DNA _struct_keywords.text ;Protein-DNA complex, Winged helix, Rossmann fold, NAD+, Repressor, Transcription, Transcription regulation, REDOX sensing, Transcription-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 8 ? ASP A 28 ? PRO A 8 ASP A 28 1 ? 21 HELX_P HELX_P2 2 SER A 34 ? GLY A 43 ? SER A 34 GLY A 43 1 ? 10 HELX_P HELX_P3 3 ASP A 45 ? TYR A 55 ? ASP A 45 TYR A 55 1 ? 11 HELX_P HELX_P4 4 VAL A 68 ? LEU A 79 ? VAL A 68 LEU A 79 1 ? 12 HELX_P HELX_P5 5 GLY A 93 ? HIS A 101 ? GLY A 93 HIS A 101 1 ? 9 HELX_P HELX_P6 6 ARG A 103 ? ARG A 107 ? ARG A 103 ARG A 107 5 ? 5 HELX_P HELX_P7 7 THR A 139 ? LEU A 144 ? THR A 139 LEU A 144 1 ? 6 HELX_P HELX_P8 8 PRO A 157 ? THR A 159 ? PRO A 157 THR A 159 5 ? 3 HELX_P HELX_P9 9 GLU A 160 ? ALA A 171 ? GLU A 160 ALA A 171 1 ? 12 HELX_P HELX_P10 10 ASP A 196 ? GLN A 210 ? ASP A 196 GLN A 210 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 10 N3 ? ? B DA 2 C DT 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 10 O4 ? ? B DA 2 C DT 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 3 C DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 3 C DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 8 N1 ? ? B DT 4 C DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 8 N6 ? ? B DT 4 C DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 5 C DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 5 C DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 5 C DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 6 C DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 6 C DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 7 C DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 7 C DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 7 C DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 8 C DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 8 C DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 9 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 9 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 10 C DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 10 C DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 11 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 11 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 32 ? ALA A 33 ? LYS A 32 ALA A 33 A 2 TYR A 66 ? ASP A 67 ? TYR A 66 ASP A 67 B 1 VAL A 134 ? GLY A 136 ? VAL A 134 GLY A 136 B 2 MET A 110 ? ASP A 117 ? MET A 110 ASP A 117 B 3 THR A 85 ? VAL A 90 ? THR A 85 VAL A 90 B 4 THR A 151 ? LEU A 154 ? THR A 151 LEU A 154 B 5 GLY A 175 ? SER A 178 ? GLY A 175 SER A 178 B 6 ILE A 191 ? TYR A 194 ? ILE A 191 TYR A 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 33 ? N ALA A 33 O TYR A 66 ? O TYR A 66 B 1 2 O TYR A 135 ? O TYR A 135 N ALA A 115 ? N ALA A 115 B 2 3 O GLN A 111 ? O GLN A 111 N VAL A 87 ? N VAL A 87 B 3 4 N MET A 88 ? N MET A 88 O ILE A 153 ? O ILE A 153 B 4 5 N LEU A 154 ? N LEU A 154 O LEU A 177 ? O LEU A 177 B 5 6 N ILE A 176 ? N ILE A 176 O GLN A 193 ? O GLN A 193 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NAD 213 ? 24 'BINDING SITE FOR RESIDUE NAD A 213' AC2 Software A MG 214 ? 4 'BINDING SITE FOR RESIDUE MG A 214' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 GLY A 91 ? GLY A 91 . ? 1_555 ? 2 AC1 24 CYS A 92 ? CYS A 92 . ? 1_555 ? 3 AC1 24 GLY A 93 ? GLY A 93 . ? 1_555 ? 4 AC1 24 ASN A 94 ? ASN A 94 . ? 1_555 ? 5 AC1 24 ILE A 95 ? ILE A 95 . ? 1_555 ? 6 AC1 24 ALA A 98 ? ALA A 98 . ? 2_555 ? 7 AC1 24 LEU A 99 ? LEU A 99 . ? 2_555 ? 8 AC1 24 TYR A 102 ? TYR A 102 . ? 2_555 ? 9 AC1 24 ASP A 117 ? ASP A 117 . ? 1_555 ? 10 AC1 24 LEU A 118 ? LEU A 118 . ? 1_555 ? 11 AC1 24 ILE A 137 ? ILE A 137 . ? 1_555 ? 12 AC1 24 THR A 155 ? THR A 155 . ? 1_555 ? 13 AC1 24 VAL A 156 ? VAL A 156 . ? 1_555 ? 14 AC1 24 PRO A 157 ? PRO A 157 . ? 1_555 ? 15 AC1 24 SER A 158 ? SER A 158 . ? 1_555 ? 16 AC1 24 VAL A 164 ? VAL A 164 . ? 1_555 ? 17 AC1 24 PHE A 179 ? PHE A 179 . ? 1_555 ? 18 AC1 24 SER A 180 ? SER A 180 . ? 1_555 ? 19 AC1 24 THR A 198 ? THR A 198 . ? 1_555 ? 20 AC1 24 HOH F . ? HOH A 217 . ? 1_555 ? 21 AC1 24 HOH F . ? HOH A 220 . ? 1_555 ? 22 AC1 24 HOH F . ? HOH A 224 . ? 1_555 ? 23 AC1 24 HOH F . ? HOH A 226 . ? 1_555 ? 24 AC1 24 HOH F . ? HOH A 285 . ? 2_555 ? 25 AC2 4 ARG A 20 ? ARG A 20 . ? 1_555 ? 26 AC2 4 TYR A 102 ? TYR A 102 . ? 1_555 ? 27 AC2 4 PRO A 181 ? PRO A 181 . ? 2_555 ? 28 AC2 4 THR A 198 ? THR A 198 . ? 2_555 ? # _database_PDB_matrix.entry_id 3KET _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KET _atom_sites.fract_transf_matrix[1][1] 0.020525 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009343 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006496 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ILE 2 2 ? ? ? A . n A 1 3 MET 3 3 ? ? ? A . n A 1 4 ASP 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 HIS 82 82 82 HIS HIS A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 MET 110 110 110 MET MET A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 TYR 194 194 194 TYR TYR A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 GLU 200 200 200 GLU GLU A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 TYR 206 206 206 TYR TYR A . n A 1 207 PHE 207 207 207 PHE PHE A . n A 1 208 MET 208 208 208 MET MET A . n A 1 209 ASN 209 209 209 ASN ASN A . n A 1 210 GLN 210 210 210 GLN GLN A . n A 1 211 GLN 211 211 ? ? ? A . n A 1 212 ARG 212 212 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DT 6 6 6 DT DT B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DA 8 8 8 DA DA B . n B 2 9 DA 9 9 9 DA DA B . n B 2 10 DA 10 10 10 DA DA B . n B 2 11 DT 11 11 11 DT DT B . n C 3 1 DA 1 34 34 DA DA C . n C 3 2 DT 2 35 35 DT DT C . n C 3 3 DT 3 36 36 DT DT C . n C 3 4 DT 4 37 37 DT DT C . n C 3 5 DC 5 38 38 DC DC C . n C 3 6 DA 6 39 39 DA DA C . n C 3 7 DC 7 40 40 DC DC C . n C 3 8 DA 8 41 41 DA DA C . n C 3 9 DA 9 42 42 DA DA C . n C 3 10 DT 10 43 43 DT DT C . n C 3 11 DT 11 44 44 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAD 1 213 213 NAD NAD A . E 5 MG 1 214 214 MG MG A . F 6 HOH 1 215 215 HOH HOH A . F 6 HOH 2 216 216 HOH HOH A . F 6 HOH 3 217 217 HOH HOH A . F 6 HOH 4 218 218 HOH HOH A . F 6 HOH 5 219 219 HOH HOH A . F 6 HOH 6 220 220 HOH HOH A . F 6 HOH 7 221 221 HOH HOH A . F 6 HOH 8 222 222 HOH HOH A . F 6 HOH 9 223 223 HOH HOH A . F 6 HOH 10 224 224 HOH HOH A . F 6 HOH 11 225 225 HOH HOH A . F 6 HOH 12 226 226 HOH HOH A . F 6 HOH 13 227 227 HOH HOH A . F 6 HOH 14 228 228 HOH HOH A . F 6 HOH 15 229 229 HOH HOH A . F 6 HOH 16 230 230 HOH HOH A . F 6 HOH 17 231 231 HOH HOH A . F 6 HOH 18 232 232 HOH HOH A . F 6 HOH 19 233 233 HOH HOH A . F 6 HOH 20 234 234 HOH HOH A . F 6 HOH 21 235 235 HOH HOH A . F 6 HOH 22 236 236 HOH HOH A . F 6 HOH 23 237 237 HOH HOH A . F 6 HOH 24 238 238 HOH HOH A . F 6 HOH 25 239 239 HOH HOH A . F 6 HOH 26 240 240 HOH HOH A . F 6 HOH 27 241 241 HOH HOH A . F 6 HOH 28 242 242 HOH HOH A . F 6 HOH 29 243 243 HOH HOH A . F 6 HOH 30 244 244 HOH HOH A . F 6 HOH 31 245 245 HOH HOH A . F 6 HOH 32 246 246 HOH HOH A . F 6 HOH 33 247 247 HOH HOH A . F 6 HOH 34 248 248 HOH HOH A . F 6 HOH 35 249 249 HOH HOH A . F 6 HOH 36 250 250 HOH HOH A . F 6 HOH 37 251 251 HOH HOH A . F 6 HOH 38 252 252 HOH HOH A . F 6 HOH 39 253 253 HOH HOH A . F 6 HOH 40 254 254 HOH HOH A . F 6 HOH 41 255 255 HOH HOH A . F 6 HOH 42 256 256 HOH HOH A . F 6 HOH 43 257 257 HOH HOH A . F 6 HOH 44 258 258 HOH HOH A . F 6 HOH 45 259 259 HOH HOH A . F 6 HOH 46 260 260 HOH HOH A . F 6 HOH 47 261 261 HOH HOH A . F 6 HOH 48 262 262 HOH HOH A . F 6 HOH 49 263 263 HOH HOH A . F 6 HOH 50 264 264 HOH HOH A . F 6 HOH 51 265 265 HOH HOH A . F 6 HOH 52 266 266 HOH HOH A . F 6 HOH 53 267 267 HOH HOH A . F 6 HOH 54 268 268 HOH HOH A . F 6 HOH 55 269 269 HOH HOH A . F 6 HOH 56 270 270 HOH HOH A . F 6 HOH 57 271 271 HOH HOH A . F 6 HOH 58 272 272 HOH HOH A . F 6 HOH 59 273 273 HOH HOH A . F 6 HOH 60 274 274 HOH HOH A . F 6 HOH 61 275 275 HOH HOH A . F 6 HOH 62 276 276 HOH HOH A . F 6 HOH 63 277 277 HOH HOH A . F 6 HOH 64 278 278 HOH HOH A . F 6 HOH 65 279 279 HOH HOH A . F 6 HOH 66 280 280 HOH HOH A . F 6 HOH 67 281 281 HOH HOH A . F 6 HOH 68 282 282 HOH HOH A . F 6 HOH 69 283 283 HOH HOH A . F 6 HOH 70 284 284 HOH HOH A . F 6 HOH 71 285 285 HOH HOH A . F 6 HOH 72 286 286 HOH HOH A . F 6 HOH 73 287 287 HOH HOH A . F 6 HOH 74 288 288 HOH HOH A . F 6 HOH 75 289 289 HOH HOH A . F 6 HOH 76 290 290 HOH HOH A . F 6 HOH 77 291 291 HOH HOH A . F 6 HOH 78 292 292 HOH HOH A . F 6 HOH 79 293 293 HOH HOH A . F 6 HOH 80 294 294 HOH HOH A . F 6 HOH 81 295 295 HOH HOH A . F 6 HOH 82 296 296 HOH HOH A . F 6 HOH 83 297 297 HOH HOH A . F 6 HOH 84 298 298 HOH HOH A . F 6 HOH 85 299 299 HOH HOH A . F 6 HOH 86 300 300 HOH HOH A . F 6 HOH 87 301 301 HOH HOH A . F 6 HOH 88 302 302 HOH HOH A . F 6 HOH 89 303 303 HOH HOH A . F 6 HOH 90 304 304 HOH HOH A . F 6 HOH 91 305 305 HOH HOH A . F 6 HOH 92 306 306 HOH HOH A . F 6 HOH 93 307 307 HOH HOH A . F 6 HOH 94 308 308 HOH HOH A . F 6 HOH 95 309 309 HOH HOH A . F 6 HOH 96 310 310 HOH HOH A . F 6 HOH 97 311 311 HOH HOH A . F 6 HOH 98 312 312 HOH HOH A . F 6 HOH 99 313 313 HOH HOH A . F 6 HOH 100 314 314 HOH HOH A . F 6 HOH 101 315 315 HOH HOH A . F 6 HOH 102 316 316 HOH HOH A . F 6 HOH 103 317 317 HOH HOH A . F 6 HOH 104 318 318 HOH HOH A . F 6 HOH 105 319 319 HOH HOH A . F 6 HOH 106 320 320 HOH HOH A . F 6 HOH 107 321 60 HOH HOH A . F 6 HOH 108 322 322 HOH HOH A . F 6 HOH 109 323 323 HOH HOH A . F 6 HOH 110 324 324 HOH HOH A . F 6 HOH 111 325 325 HOH HOH A . G 6 HOH 1 58 58 HOH HOH B . G 6 HOH 2 61 61 HOH HOH B . G 6 HOH 3 99 99 HOH HOH B . H 6 HOH 1 29 29 HOH HOH C . H 6 HOH 2 30 30 HOH HOH C . H 6 HOH 3 71 71 HOH HOH C . H 6 HOH 4 100 100 HOH HOH C . H 6 HOH 5 101 101 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11700 ? 1 MORE -56 ? 1 'SSA (A^2)' 24130 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-05-16 4 'Structure model' 1 3 2021-09-08 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 3 'Structure model' pdbx_entity_src_syn 3 4 'Structure model' citation 4 4 'Structure model' citation_author 5 4 'Structure model' database_2 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 4 4 'Structure model' '_citation.country' 5 4 'Structure model' '_citation.journal_abbrev' 6 4 'Structure model' '_citation.journal_id_CSD' 7 4 'Structure model' '_citation.journal_id_ISSN' 8 4 'Structure model' '_citation.journal_volume' 9 4 'Structure model' '_citation.page_first' 10 4 'Structure model' '_citation.page_last' 11 4 'Structure model' '_citation.pdbx_database_id_DOI' 12 4 'Structure model' '_citation.pdbx_database_id_PubMed' 13 4 'Structure model' '_citation.title' 14 4 'Structure model' '_citation.year' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 13.1175 14.3014 35.3959 0.1068 0.0977 0.1473 -0.0609 -0.0619 -0.0128 1.7538 6.8909 6.1974 -0.2425 -0.9813 2.9620 0.1946 -0.0637 0.1661 0.4178 0.0318 -0.6702 -0.1416 0.1881 -0.2264 'X-RAY DIFFRACTION' 2 ? refined 8.3304 16.3633 50.7757 0.5122 0.1495 0.0378 -0.2270 -0.0567 -0.0078 3.5737 5.6965 1.1023 2.3481 0.4519 2.3596 0.4917 -0.4420 0.0004 1.0896 -0.4698 -0.0828 0.3652 -0.1163 -0.0219 'X-RAY DIFFRACTION' 3 ? refined 7.1203 14.5145 51.0010 0.4776 0.1208 0.0446 -0.1970 0.0067 -0.0231 4.0971 7.4421 2.5173 3.5936 0.7357 1.9259 0.3182 -0.4139 0.0717 1.0384 -0.4690 0.0603 0.3611 -0.2683 0.1508 'X-RAY DIFFRACTION' 4 ? refined 10.6165 -8.8623 14.7141 0.0283 0.1242 0.0367 0.0455 0.0132 -0.0124 2.3287 1.8304 1.8939 0.5364 -0.4538 -0.3020 -0.0409 0.1216 -0.2178 -0.1515 -0.0531 -0.1521 0.1225 0.1842 0.0939 'X-RAY DIFFRACTION' 5 ? refined -7.3710 -1.4910 27.7880 0.0607 0.1447 0.0294 -0.0096 0.0372 -0.0115 3.6414 3.8708 0.6391 -2.3427 -0.1343 -0.5589 -0.0448 -0.1803 -0.0768 0.3187 0.0594 0.2831 -0.0027 -0.0756 -0.0146 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 6 ? ? A 80 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 11 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 34 ? ? C 44 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 90 ? ? A 190 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 191 ? ? A 210 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language MAR345dtb 'data collection' . ? 1 ? ? ? ? PHASER phasing . ? 2 ? ? ? ? REFMAC refinement 5.5.0072 ? 3 ? ? ? ? XDS 'data reduction' . ? 4 ? ? ? ? XSCALE 'data scaling' . ? 5 ? ? ? ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O3'" _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 11 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 P _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 DA _pdbx_validate_symm_contact.auth_seq_id_2 34 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 1.56 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DT 11 ? ? "C3'" B DT 11 ? ? 1.375 1.419 -0.044 0.006 N 2 1 "O3'" C DT 35 ? ? "C3'" C DT 35 ? ? 1.375 1.419 -0.044 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 20 ? ? CZ A ARG 20 ? ? NH1 A ARG 20 ? ? 124.87 120.30 4.57 0.50 N 2 1 NE A ARG 20 ? ? CZ A ARG 20 ? ? NH2 A ARG 20 ? ? 115.15 120.30 -5.15 0.50 N 3 1 "O4'" B DA 1 ? ? "C1'" B DA 1 ? ? N9 B DA 1 ? ? 112.61 108.30 4.31 0.30 N 4 1 C2 B DA 1 ? ? N3 B DA 1 ? ? C4 B DA 1 ? ? 107.51 110.60 -3.09 0.50 N 5 1 C4 B DA 1 ? ? C5 B DA 1 ? ? N7 B DA 1 ? ? 113.92 110.70 3.22 0.50 N 6 1 C5 B DA 1 ? ? N7 B DA 1 ? ? C8 B DA 1 ? ? 99.46 103.90 -4.44 0.50 N 7 1 N7 B DA 1 ? ? C8 B DA 1 ? ? N9 B DA 1 ? ? 117.40 113.80 3.60 0.50 N 8 1 "O5'" B DA 2 ? ? P B DA 2 ? ? OP1 B DA 2 ? ? 120.26 110.70 9.56 1.20 N 9 1 "O5'" B DA 2 ? ? P B DA 2 ? ? OP2 B DA 2 ? ? 99.00 105.70 -6.70 0.90 N 10 1 "C1'" B DA 2 ? ? "O4'" B DA 2 ? ? "C4'" B DA 2 ? ? 103.58 110.10 -6.52 1.00 N 11 1 C6 B DT 4 ? ? N1 B DT 4 ? ? C2 B DT 4 ? ? 118.17 121.30 -3.13 0.50 N 12 1 N3 B DT 4 ? ? C4 B DT 4 ? ? O4 B DT 4 ? ? 123.69 119.90 3.79 0.60 N 13 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 103.59 108.00 -4.41 0.70 N 14 1 "C3'" B DG 5 ? ? "O3'" B DG 5 ? ? P B DT 6 ? ? 128.53 119.70 8.83 1.20 Y 15 1 "O3'" B DG 5 ? ? P B DT 6 ? ? "O5'" B DT 6 ? ? 81.05 104.00 -22.95 1.90 Y 16 1 "O3'" B DG 5 ? ? P B DT 6 ? ? OP1 B DT 6 ? ? 83.20 105.20 -22.00 2.20 Y 17 1 "O5'" B DT 6 ? ? P B DT 6 ? ? OP1 B DT 6 ? ? 123.02 110.70 12.32 1.20 N 18 1 "O4'" B DT 6 ? ? "C1'" B DT 6 ? ? N1 B DT 6 ? ? 110.31 108.30 2.01 0.30 N 19 1 N3 B DT 6 ? ? C2 B DT 6 ? ? O2 B DT 6 ? ? 117.48 122.30 -4.82 0.60 N 20 1 "C3'" B DA 10 ? ? "C2'" B DA 10 ? ? "C1'" B DA 10 ? ? 97.60 102.40 -4.80 0.80 N 21 1 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 111.53 108.30 3.23 0.30 N 22 1 C4 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 124.55 119.00 5.55 0.60 N 23 1 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 118.32 122.90 -4.58 0.60 N 24 1 "O4'" C DT 36 ? ? "C1'" C DT 36 ? ? N1 C DT 36 ? ? 99.37 108.00 -8.63 0.70 N 25 1 C4 C DT 37 ? ? C5 C DT 37 ? ? C7 C DT 37 ? ? 123.37 119.00 4.37 0.60 N 26 1 "O4'" C DC 38 ? ? "C1'" C DC 38 ? ? N1 C DC 38 ? ? 102.55 108.00 -5.45 0.70 N 27 1 "C3'" C DC 38 ? ? "O3'" C DC 38 ? ? P C DA 39 ? ? 127.11 119.70 7.41 1.20 Y 28 1 "O4'" C DA 39 ? ? "C1'" C DA 39 ? ? N9 C DA 39 ? ? 111.52 108.30 3.22 0.30 N 29 1 C8 C DA 39 ? ? N9 C DA 39 ? ? C4 C DA 39 ? ? 108.48 105.80 2.68 0.40 N 30 1 "O4'" C DC 40 ? ? "C1'" C DC 40 ? ? N1 C DC 40 ? ? 113.15 108.30 4.85 0.30 N 31 1 "O4'" C DA 41 ? ? "C4'" C DA 41 ? ? "C3'" C DA 41 ? ? 102.09 104.50 -2.41 0.40 N 32 1 N3 C DT 43 ? ? C2 C DT 43 ? ? O2 C DT 43 ? ? 118.69 122.30 -3.61 0.60 N 33 1 N3 C DT 43 ? ? C4 C DT 43 ? ? O4 C DT 43 ? ? 114.19 119.90 -5.71 0.60 N 34 1 C5 C DT 43 ? ? C4 C DT 43 ? ? O4 C DT 43 ? ? 129.26 124.90 4.36 0.70 N 35 1 C4 C DT 43 ? ? C5 C DT 43 ? ? C7 C DT 43 ? ? 122.75 119.00 3.75 0.60 N 36 1 "C3'" C DT 43 ? ? "O3'" C DT 43 ? ? P C DT 44 ? ? 112.37 119.70 -7.33 1.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 109 ? ? -95.32 56.72 2 1 ASP A 146 ? ? 63.63 -4.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DT 44 ? "O5'" ? C DT 11 "O5'" 2 1 Y 1 C DT 44 ? "C5'" ? C DT 11 "C5'" 3 1 Y 1 C DT 44 ? "C4'" ? C DT 11 "C4'" 4 1 Y 1 C DT 44 ? "O4'" ? C DT 11 "O4'" 5 1 Y 1 C DT 44 ? "C3'" ? C DT 11 "C3'" 6 1 Y 1 C DT 44 ? "O3'" ? C DT 11 "O3'" 7 1 Y 1 C DT 44 ? "C2'" ? C DT 11 "C2'" 8 1 Y 1 C DT 44 ? "C1'" ? C DT 11 "C1'" 9 1 Y 1 C DT 44 ? N1 ? C DT 11 N1 10 1 Y 1 C DT 44 ? C2 ? C DT 11 C2 11 1 Y 1 C DT 44 ? O2 ? C DT 11 O2 12 1 Y 1 C DT 44 ? N3 ? C DT 11 N3 13 1 Y 1 C DT 44 ? C4 ? C DT 11 C4 14 1 Y 1 C DT 44 ? O4 ? C DT 11 O4 15 1 Y 1 C DT 44 ? C5 ? C DT 11 C5 16 1 Y 1 C DT 44 ? C7 ? C DT 11 C7 17 1 Y 1 C DT 44 ? C6 ? C DT 11 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ILE 2 ? A ILE 2 3 1 Y 1 A MET 3 ? A MET 3 4 1 Y 1 A ASP 4 ? A ASP 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A GLN 211 ? A GLN 211 7 1 Y 1 A ARG 212 ? A ARG 212 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 NAD PA P N S 394 NAD O1A O N N 395 NAD O2A O N N 396 NAD O5B O N N 397 NAD C5B C N N 398 NAD C4B C N R 399 NAD O4B O N N 400 NAD C3B C N S 401 NAD O3B O N N 402 NAD C2B C N R 403 NAD O2B O N N 404 NAD C1B C N R 405 NAD N9A N Y N 406 NAD C8A C Y N 407 NAD N7A N Y N 408 NAD C5A C Y N 409 NAD C6A C Y N 410 NAD N6A N N N 411 NAD N1A N Y N 412 NAD C2A C Y N 413 NAD N3A N Y N 414 NAD C4A C Y N 415 NAD O3 O N N 416 NAD PN P N N 417 NAD O1N O N N 418 NAD O2N O N N 419 NAD O5D O N N 420 NAD C5D C N N 421 NAD C4D C N R 422 NAD O4D O N N 423 NAD C3D C N S 424 NAD O3D O N N 425 NAD C2D C N R 426 NAD O2D O N N 427 NAD C1D C N R 428 NAD N1N N Y N 429 NAD C2N C Y N 430 NAD C3N C Y N 431 NAD C7N C N N 432 NAD O7N O N N 433 NAD N7N N N N 434 NAD C4N C Y N 435 NAD C5N C Y N 436 NAD C6N C Y N 437 NAD HOA2 H N N 438 NAD H51A H N N 439 NAD H52A H N N 440 NAD H4B H N N 441 NAD H3B H N N 442 NAD HO3A H N N 443 NAD H2B H N N 444 NAD HO2A H N N 445 NAD H1B H N N 446 NAD H8A H N N 447 NAD H61A H N N 448 NAD H62A H N N 449 NAD H2A H N N 450 NAD H51N H N N 451 NAD H52N H N N 452 NAD H4D H N N 453 NAD H3D H N N 454 NAD HO3N H N N 455 NAD H2D H N N 456 NAD HO2N H N N 457 NAD H1D H N N 458 NAD H2N H N N 459 NAD H71N H N N 460 NAD H72N H N N 461 NAD H4N H N N 462 NAD H5N H N N 463 NAD H6N H N N 464 PHE N N N N 465 PHE CA C N S 466 PHE C C N N 467 PHE O O N N 468 PHE CB C N N 469 PHE CG C Y N 470 PHE CD1 C Y N 471 PHE CD2 C Y N 472 PHE CE1 C Y N 473 PHE CE2 C Y N 474 PHE CZ C Y N 475 PHE OXT O N N 476 PHE H H N N 477 PHE H2 H N N 478 PHE HA H N N 479 PHE HB2 H N N 480 PHE HB3 H N N 481 PHE HD1 H N N 482 PHE HD2 H N N 483 PHE HE1 H N N 484 PHE HE2 H N N 485 PHE HZ H N N 486 PHE HXT H N N 487 PRO N N N N 488 PRO CA C N S 489 PRO C C N N 490 PRO O O N N 491 PRO CB C N N 492 PRO CG C N N 493 PRO CD C N N 494 PRO OXT O N N 495 PRO H H N N 496 PRO HA H N N 497 PRO HB2 H N N 498 PRO HB3 H N N 499 PRO HG2 H N N 500 PRO HG3 H N N 501 PRO HD2 H N N 502 PRO HD3 H N N 503 PRO HXT H N N 504 SER N N N N 505 SER CA C N S 506 SER C C N N 507 SER O O N N 508 SER CB C N N 509 SER OG O N N 510 SER OXT O N N 511 SER H H N N 512 SER H2 H N N 513 SER HA H N N 514 SER HB2 H N N 515 SER HB3 H N N 516 SER HG H N N 517 SER HXT H N N 518 THR N N N N 519 THR CA C N S 520 THR C C N N 521 THR O O N N 522 THR CB C N R 523 THR OG1 O N N 524 THR CG2 C N N 525 THR OXT O N N 526 THR H H N N 527 THR H2 H N N 528 THR HA H N N 529 THR HB H N N 530 THR HG1 H N N 531 THR HG21 H N N 532 THR HG22 H N N 533 THR HG23 H N N 534 THR HXT H N N 535 TYR N N N N 536 TYR CA C N S 537 TYR C C N N 538 TYR O O N N 539 TYR CB C N N 540 TYR CG C Y N 541 TYR CD1 C Y N 542 TYR CD2 C Y N 543 TYR CE1 C Y N 544 TYR CE2 C Y N 545 TYR CZ C Y N 546 TYR OH O N N 547 TYR OXT O N N 548 TYR H H N N 549 TYR H2 H N N 550 TYR HA H N N 551 TYR HB2 H N N 552 TYR HB3 H N N 553 TYR HD1 H N N 554 TYR HD2 H N N 555 TYR HE1 H N N 556 TYR HE2 H N N 557 TYR HH H N N 558 TYR HXT H N N 559 VAL N N N N 560 VAL CA C N S 561 VAL C C N N 562 VAL O O N N 563 VAL CB C N N 564 VAL CG1 C N N 565 VAL CG2 C N N 566 VAL OXT O N N 567 VAL H H N N 568 VAL H2 H N N 569 VAL HA H N N 570 VAL HB H N N 571 VAL HG11 H N N 572 VAL HG12 H N N 573 VAL HG13 H N N 574 VAL HG21 H N N 575 VAL HG22 H N N 576 VAL HG23 H N N 577 VAL HXT H N N 578 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 NAD PA O1A doub N N 386 NAD PA O2A sing N N 387 NAD PA O5B sing N N 388 NAD PA O3 sing N N 389 NAD O2A HOA2 sing N N 390 NAD O5B C5B sing N N 391 NAD C5B C4B sing N N 392 NAD C5B H51A sing N N 393 NAD C5B H52A sing N N 394 NAD C4B O4B sing N N 395 NAD C4B C3B sing N N 396 NAD C4B H4B sing N N 397 NAD O4B C1B sing N N 398 NAD C3B O3B sing N N 399 NAD C3B C2B sing N N 400 NAD C3B H3B sing N N 401 NAD O3B HO3A sing N N 402 NAD C2B O2B sing N N 403 NAD C2B C1B sing N N 404 NAD C2B H2B sing N N 405 NAD O2B HO2A sing N N 406 NAD C1B N9A sing N N 407 NAD C1B H1B sing N N 408 NAD N9A C8A sing Y N 409 NAD N9A C4A sing Y N 410 NAD C8A N7A doub Y N 411 NAD C8A H8A sing N N 412 NAD N7A C5A sing Y N 413 NAD C5A C6A sing Y N 414 NAD C5A C4A doub Y N 415 NAD C6A N6A sing N N 416 NAD C6A N1A doub Y N 417 NAD N6A H61A sing N N 418 NAD N6A H62A sing N N 419 NAD N1A C2A sing Y N 420 NAD C2A N3A doub Y N 421 NAD C2A H2A sing N N 422 NAD N3A C4A sing Y N 423 NAD O3 PN sing N N 424 NAD PN O1N doub N N 425 NAD PN O2N sing N N 426 NAD PN O5D sing N N 427 NAD O5D C5D sing N N 428 NAD C5D C4D sing N N 429 NAD C5D H51N sing N N 430 NAD C5D H52N sing N N 431 NAD C4D O4D sing N N 432 NAD C4D C3D sing N N 433 NAD C4D H4D sing N N 434 NAD O4D C1D sing N N 435 NAD C3D O3D sing N N 436 NAD C3D C2D sing N N 437 NAD C3D H3D sing N N 438 NAD O3D HO3N sing N N 439 NAD C2D O2D sing N N 440 NAD C2D C1D sing N N 441 NAD C2D H2D sing N N 442 NAD O2D HO2N sing N N 443 NAD C1D N1N sing N N 444 NAD C1D H1D sing N N 445 NAD N1N C2N sing Y N 446 NAD N1N C6N doub Y N 447 NAD C2N C3N doub Y N 448 NAD C2N H2N sing N N 449 NAD C3N C7N sing N N 450 NAD C3N C4N sing Y N 451 NAD C7N O7N doub N N 452 NAD C7N N7N sing N N 453 NAD N7N H71N sing N N 454 NAD N7N H72N sing N N 455 NAD C4N C5N doub Y N 456 NAD C4N H4N sing N N 457 NAD C5N C6N sing Y N 458 NAD C5N H5N sing N N 459 NAD C6N H6N sing N N 460 PHE N CA sing N N 461 PHE N H sing N N 462 PHE N H2 sing N N 463 PHE CA C sing N N 464 PHE CA CB sing N N 465 PHE CA HA sing N N 466 PHE C O doub N N 467 PHE C OXT sing N N 468 PHE CB CG sing N N 469 PHE CB HB2 sing N N 470 PHE CB HB3 sing N N 471 PHE CG CD1 doub Y N 472 PHE CG CD2 sing Y N 473 PHE CD1 CE1 sing Y N 474 PHE CD1 HD1 sing N N 475 PHE CD2 CE2 doub Y N 476 PHE CD2 HD2 sing N N 477 PHE CE1 CZ doub Y N 478 PHE CE1 HE1 sing N N 479 PHE CE2 CZ sing Y N 480 PHE CE2 HE2 sing N N 481 PHE CZ HZ sing N N 482 PHE OXT HXT sing N N 483 PRO N CA sing N N 484 PRO N CD sing N N 485 PRO N H sing N N 486 PRO CA C sing N N 487 PRO CA CB sing N N 488 PRO CA HA sing N N 489 PRO C O doub N N 490 PRO C OXT sing N N 491 PRO CB CG sing N N 492 PRO CB HB2 sing N N 493 PRO CB HB3 sing N N 494 PRO CG CD sing N N 495 PRO CG HG2 sing N N 496 PRO CG HG3 sing N N 497 PRO CD HD2 sing N N 498 PRO CD HD3 sing N N 499 PRO OXT HXT sing N N 500 SER N CA sing N N 501 SER N H sing N N 502 SER N H2 sing N N 503 SER CA C sing N N 504 SER CA CB sing N N 505 SER CA HA sing N N 506 SER C O doub N N 507 SER C OXT sing N N 508 SER CB OG sing N N 509 SER CB HB2 sing N N 510 SER CB HB3 sing N N 511 SER OG HG sing N N 512 SER OXT HXT sing N N 513 THR N CA sing N N 514 THR N H sing N N 515 THR N H2 sing N N 516 THR CA C sing N N 517 THR CA CB sing N N 518 THR CA HA sing N N 519 THR C O doub N N 520 THR C OXT sing N N 521 THR CB OG1 sing N N 522 THR CB CG2 sing N N 523 THR CB HB sing N N 524 THR OG1 HG1 sing N N 525 THR CG2 HG21 sing N N 526 THR CG2 HG22 sing N N 527 THR CG2 HG23 sing N N 528 THR OXT HXT sing N N 529 TYR N CA sing N N 530 TYR N H sing N N 531 TYR N H2 sing N N 532 TYR CA C sing N N 533 TYR CA CB sing N N 534 TYR CA HA sing N N 535 TYR C O doub N N 536 TYR C OXT sing N N 537 TYR CB CG sing N N 538 TYR CB HB2 sing N N 539 TYR CB HB3 sing N N 540 TYR CG CD1 doub Y N 541 TYR CG CD2 sing Y N 542 TYR CD1 CE1 sing Y N 543 TYR CD1 HD1 sing N N 544 TYR CD2 CE2 doub Y N 545 TYR CD2 HD2 sing N N 546 TYR CE1 CZ doub Y N 547 TYR CE1 HE1 sing N N 548 TYR CE2 CZ sing Y N 549 TYR CE2 HE2 sing N N 550 TYR CZ OH sing N N 551 TYR OH HH sing N N 552 TYR OXT HXT sing N N 553 VAL N CA sing N N 554 VAL N H sing N N 555 VAL N H2 sing N N 556 VAL CA C sing N N 557 VAL CA CB sing N N 558 VAL CA HA sing N N 559 VAL C O doub N N 560 VAL C OXT sing N N 561 VAL CB CG1 sing N N 562 VAL CB CG2 sing N N 563 VAL CB HB sing N N 564 VAL CG1 HG11 sing N N 565 VAL CG1 HG12 sing N N 566 VAL CG1 HG13 sing N N 567 VAL CG2 HG21 sing N N 568 VAL CG2 HG22 sing N N 569 VAL CG2 HG23 sing N N 570 VAL OXT HXT sing N N 571 # _ndb_struct_conf_na.entry_id 3KET _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 2 1_555 C DT 10 1_555 0.245 -0.080 -0.326 -16.899 -4.701 6.569 1 B_DA2:DT43_C B 2 ? C 43 ? 20 1 1 B DT 3 1_555 C DA 9 1_555 -0.093 -0.207 0.072 3.150 -7.738 -2.035 2 B_DT3:DA42_C B 3 ? C 42 ? 20 1 1 B DT 4 1_555 C DA 8 1_555 0.492 -0.175 -0.302 -4.723 -25.778 -6.038 3 B_DT4:DA41_C B 4 ? C 41 ? 20 1 1 B DG 5 1_555 C DC 7 1_555 -0.173 -0.213 -0.046 -7.221 -5.740 -0.651 4 B_DG5:DC40_C B 5 ? C 40 ? 19 1 1 B DT 6 1_555 C DA 6 1_555 0.176 -0.141 -0.102 10.430 -1.270 1.272 5 B_DT6:DA39_C B 6 ? C 39 ? 20 1 1 B DG 7 1_555 C DC 5 1_555 -0.508 -0.401 0.101 11.830 -11.313 -2.864 6 B_DG7:DC38_C B 7 ? C 38 ? 19 1 1 B DA 8 1_555 C DT 4 1_555 -0.293 -0.013 0.039 4.419 -20.555 -0.907 7 B_DA8:DT37_C B 8 ? C 37 ? 20 1 1 B DA 9 1_555 C DT 3 1_555 -0.251 0.098 -0.141 1.754 -15.393 6.498 8 B_DA9:DT36_C B 9 ? C 36 ? 20 1 1 B DA 10 1_555 C DT 2 1_555 -0.070 -0.030 -0.110 3.298 -13.056 3.279 9 B_DA10:DT35_C B 10 ? C 35 ? 20 1 1 B DT 11 1_555 C DA 1 1_555 -0.162 0.067 0.098 6.371 -9.916 8.164 10 B_DT11:DA34_C B 11 ? C 34 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 2 1_555 C DT 10 1_555 B DT 3 1_555 C DA 9 1_555 -0.738 -0.507 2.875 -1.729 3.209 23.033 -2.218 1.307 2.826 7.973 4.295 23.316 1 BB_DA2DT3:DA42DT43_CC B 2 ? C 43 ? B 3 ? C 42 ? 1 B DT 3 1_555 C DA 9 1_555 B DT 4 1_555 C DA 8 1_555 -0.526 -0.085 3.460 4.279 -5.336 43.110 0.424 1.141 3.382 -7.207 -5.780 43.623 2 BB_DT3DT4:DA41DA42_CC B 3 ? C 42 ? B 4 ? C 41 ? 1 B DT 4 1_555 C DA 8 1_555 B DG 5 1_555 C DC 7 1_555 0.817 1.319 3.468 -0.253 6.072 38.283 1.178 -1.266 3.622 9.187 0.383 38.744 3 BB_DT4DG5:DC40DA41_CC B 4 ? C 41 ? B 5 ? C 40 ? 1 B DG 5 1_555 C DC 7 1_555 B DT 6 1_555 C DA 6 1_555 0.405 0.050 2.944 -0.032 2.876 29.158 -0.461 -0.808 2.934 5.696 0.063 29.296 4 BB_DG5DT6:DA39DC40_CC B 5 ? C 40 ? B 6 ? C 39 ? 1 B DT 6 1_555 C DA 6 1_555 B DG 7 1_555 C DC 5 1_555 -1.217 0.712 3.272 -2.153 3.691 32.379 0.611 1.782 3.402 6.583 3.840 32.652 5 BB_DT6DG7:DC38DA39_CC B 6 ? C 39 ? B 7 ? C 38 ? 1 B DG 7 1_555 C DC 5 1_555 B DA 8 1_555 C DT 4 1_555 0.603 -0.290 3.434 3.542 1.555 37.439 -0.663 -0.448 3.461 2.414 -5.500 37.632 6 BB_DG7DA8:DT37DC38_CC B 7 ? C 38 ? B 8 ? C 37 ? 1 B DA 8 1_555 C DT 4 1_555 B DA 9 1_555 C DT 3 1_555 0.241 -0.243 3.190 -0.283 2.293 35.434 -0.725 -0.435 3.167 3.763 0.464 35.507 7 BB_DA8DA9:DT36DT37_CC B 8 ? C 37 ? B 9 ? C 36 ? 1 B DA 9 1_555 C DT 3 1_555 B DA 10 1_555 C DT 2 1_555 -0.014 -0.341 3.178 -0.567 -3.831 36.334 -0.027 -0.054 3.196 -6.121 0.906 36.533 8 BB_DA9DA10:DT35DT36_CC B 9 ? C 36 ? B 10 ? C 35 ? 1 B DA 10 1_555 C DT 2 1_555 B DT 11 1_555 C DA 1 1_555 0.563 -0.701 3.215 -1.554 -2.239 29.269 -0.907 -1.439 3.224 -4.419 3.068 29.393 9 BB_DA10DT11:DA34DT35_CC B 10 ? C 35 ? B 11 ? C 34 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KEO _pdbx_initial_refinement_model.details '3KEO and a fiber model double stranded B-DNA of length 11 base pairs' #