data_3KJN # _entry.id 3KJN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KJN RCSB RCSB056074 WWPDB D_1000056074 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KJF 'Caspase 3 Bound to a covalent inhibitor' unspecified PDB 3KJQ 'Caspase 8 with covalent inhibitor' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KJN _pdbx_database_status.recvd_initial_deposition_date 2009-11-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kamtekar, S.' 1 'Watt, W.' 2 'Finzel, B.C.' 3 'Harris, M.S.' 4 'Blinn, J.' 5 'Wang, Z.' 6 'Tomasselli, A.G.' 7 # _citation.id primary _citation.title 'Kinetic and structural characterization of caspase-3 and caspase-8 inhibition by a novel class of irreversible inhibitors.' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1804 _citation.page_first 1817 _citation.page_last 1831 _citation.year 2010 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20580860 _citation.pdbx_database_id_DOI 10.1016/j.bbapap.2010.05.007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, Z.' 1 primary 'Watt, W.' 2 primary 'Brooks, N.A.' 3 primary 'Harris, M.S.' 4 primary 'Urban, J.' 5 primary 'Boatman, D.' 6 primary 'McMillan, M.' 7 primary 'Kahn, M.' 8 primary 'Heinrikson, R.L.' 9 primary 'Finzel, B.C.' 10 primary 'Wittwer, A.J.' 11 primary 'Blinn, J.' 12 primary 'Kamtekar, S.' 13 primary 'Tomasselli, A.G.' 14 # _cell.entry_id 3KJN _cell.length_a 62.598 _cell.length_b 62.598 _cell.length_c 129.389 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KJN _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Caspase-8 18640.119 1 3.4.22.61 ? 'residues 211-374' ? 2 polymer man Caspase-8 10901.364 1 3.4.22.61 ? 'residues 385-479' ? 3 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? 4 non-polymer syn ;(3S)-3-({[(5S)-2-{2-[(1H-benzimidazol-5-ylcarbonyl)amino]ethyl}-7-(cyclohexylmethyl)-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazin-5-yl]carbonyl}amino)-4-oxopentanoic acid ; 593.631 1 ? ? ? ? 5 water nat water 18.015 243 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;CASP-8, ICE-like apoptotic protease 5, MORT1-associated CED-3 homolog, MACH, FADD-homologous ICE/CED-3-like protease, FADD-like ICE, FLICE, Apoptotic cysteine protease, Apoptotic protease Mch-5, CAP4, Caspase-8 subunit p18, Caspase-8 subunit p10 ; 2 ;CASP-8, ICE-like apoptotic protease 5, MORT1-associated ced-3 homolog, MACH, FADD-homologous ICE/ced-3-like protease, FADD-like ICE, FLICE, Apoptotic cysteine protease, Apoptotic protease Mch-5, CAP4, Caspase-8 subunit p18, Caspase-8 subunit p10 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SPREQDSESQTLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVE QIYEILKIYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIP VETD ; ;SPREQDSESQTLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVE QIYEILKIYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIP VETD ; A ? 2 'polypeptide(L)' no no ;LSSPQTRYIPDEADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMP QPTFTLRKKLVFPSD ; ;LSSPQTRYIPDEADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMP QPTFTLRKKLVFPSD ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 ARG n 1 4 GLU n 1 5 GLN n 1 6 ASP n 1 7 SER n 1 8 GLU n 1 9 SER n 1 10 GLN n 1 11 THR n 1 12 LEU n 1 13 ASP n 1 14 LYS n 1 15 VAL n 1 16 TYR n 1 17 GLN n 1 18 MET n 1 19 LYS n 1 20 SER n 1 21 LYS n 1 22 PRO n 1 23 ARG n 1 24 GLY n 1 25 TYR n 1 26 CYS n 1 27 LEU n 1 28 ILE n 1 29 ILE n 1 30 ASN n 1 31 ASN n 1 32 HIS n 1 33 ASN n 1 34 PHE n 1 35 ALA n 1 36 LYS n 1 37 ALA n 1 38 ARG n 1 39 GLU n 1 40 LYS n 1 41 VAL n 1 42 PRO n 1 43 LYS n 1 44 LEU n 1 45 HIS n 1 46 SER n 1 47 ILE n 1 48 ARG n 1 49 ASP n 1 50 ARG n 1 51 ASN n 1 52 GLY n 1 53 THR n 1 54 HIS n 1 55 LEU n 1 56 ASP n 1 57 ALA n 1 58 GLY n 1 59 ALA n 1 60 LEU n 1 61 THR n 1 62 THR n 1 63 THR n 1 64 PHE n 1 65 GLU n 1 66 GLU n 1 67 LEU n 1 68 HIS n 1 69 PHE n 1 70 GLU n 1 71 ILE n 1 72 LYS n 1 73 PRO n 1 74 HIS n 1 75 ASP n 1 76 ASP n 1 77 CYS n 1 78 THR n 1 79 VAL n 1 80 GLU n 1 81 GLN n 1 82 ILE n 1 83 TYR n 1 84 GLU n 1 85 ILE n 1 86 LEU n 1 87 LYS n 1 88 ILE n 1 89 TYR n 1 90 GLN n 1 91 LEU n 1 92 MET n 1 93 ASP n 1 94 HIS n 1 95 SER n 1 96 ASN n 1 97 MET n 1 98 ASP n 1 99 CYS n 1 100 PHE n 1 101 ILE n 1 102 CYS n 1 103 CYS n 1 104 ILE n 1 105 LEU n 1 106 SER n 1 107 HIS n 1 108 GLY n 1 109 ASP n 1 110 LYS n 1 111 GLY n 1 112 ILE n 1 113 ILE n 1 114 TYR n 1 115 GLY n 1 116 THR n 1 117 ASP n 1 118 GLY n 1 119 GLN n 1 120 GLU n 1 121 ALA n 1 122 PRO n 1 123 ILE n 1 124 TYR n 1 125 GLU n 1 126 LEU n 1 127 THR n 1 128 SER n 1 129 GLN n 1 130 PHE n 1 131 THR n 1 132 GLY n 1 133 LEU n 1 134 LYS n 1 135 CYS n 1 136 PRO n 1 137 SER n 1 138 LEU n 1 139 ALA n 1 140 GLY n 1 141 LYS n 1 142 PRO n 1 143 LYS n 1 144 VAL n 1 145 PHE n 1 146 PHE n 1 147 ILE n 1 148 GLN n 1 149 ALA n 1 150 CYS n 1 151 GLN n 1 152 GLY n 1 153 ASP n 1 154 ASN n 1 155 TYR n 1 156 GLN n 1 157 LYS n 1 158 GLY n 1 159 ILE n 1 160 PRO n 1 161 VAL n 1 162 GLU n 1 163 THR n 1 164 ASP n 2 1 LEU n 2 2 SER n 2 3 SER n 2 4 PRO n 2 5 GLN n 2 6 THR n 2 7 ARG n 2 8 TYR n 2 9 ILE n 2 10 PRO n 2 11 ASP n 2 12 GLU n 2 13 ALA n 2 14 ASP n 2 15 PHE n 2 16 LEU n 2 17 LEU n 2 18 GLY n 2 19 MET n 2 20 ALA n 2 21 THR n 2 22 VAL n 2 23 ASN n 2 24 ASN n 2 25 CYS n 2 26 VAL n 2 27 SER n 2 28 TYR n 2 29 ARG n 2 30 ASN n 2 31 PRO n 2 32 ALA n 2 33 GLU n 2 34 GLY n 2 35 THR n 2 36 TRP n 2 37 TYR n 2 38 ILE n 2 39 GLN n 2 40 SER n 2 41 LEU n 2 42 CYS n 2 43 GLN n 2 44 SER n 2 45 LEU n 2 46 ARG n 2 47 GLU n 2 48 ARG n 2 49 CYS n 2 50 PRO n 2 51 ARG n 2 52 GLY n 2 53 ASP n 2 54 ASP n 2 55 ILE n 2 56 LEU n 2 57 THR n 2 58 ILE n 2 59 LEU n 2 60 THR n 2 61 GLU n 2 62 VAL n 2 63 ASN n 2 64 TYR n 2 65 GLU n 2 66 VAL n 2 67 SER n 2 68 ASN n 2 69 LYS n 2 70 ASP n 2 71 ASP n 2 72 LYS n 2 73 LYS n 2 74 ASN n 2 75 MET n 2 76 GLY n 2 77 LYS n 2 78 GLN n 2 79 MET n 2 80 PRO n 2 81 GLN n 2 82 PRO n 2 83 THR n 2 84 PHE n 2 85 THR n 2 86 LEU n 2 87 ARG n 2 88 LYS n 2 89 LYS n 2 90 LEU n 2 91 VAL n 2 92 PHE n 2 93 PRO n 2 94 SER n 2 95 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'CASP8, MCH5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? 'CASP8, MCH5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CASP8_HUMAN Q14790 1 ;SPREQDSESQTLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVE QIYEILKIYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIP VETD ; 211 ? 2 UNP CASP8_HUMAN Q14790 2 ;LSSPQTRYIPDEADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMP QPTFTLRKKLVFPSD ; 385 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KJN A 1 ? 164 ? Q14790 211 ? 374 ? 211 374 2 2 3KJN B 1 ? 95 ? Q14790 385 ? 479 ? 385 479 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B93 non-polymer . ;(3S)-3-({[(5S)-2-{2-[(1H-benzimidazol-5-ylcarbonyl)amino]ethyl}-7-(cyclohexylmethyl)-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazin-5-yl]carbonyl}amino)-4-oxopentanoic acid ; ? 'C29 H35 N7 O7' 593.631 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KJN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;2 microliters of 100 mM inhibitor stock in DMSO was added to 100 microliters of 8.4 mg/mL protein in 20 mM Tris, 100 mM DTT, pH 8.0. Protein solution was mixed with an equal volume of well solution (1.0-1.1 M Citrate, 50 mM HEPES or PIPES pH 6.5, 25 mM DTT), VAPOR DIFFUSION, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double-crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3KJN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.80 _reflns.number_obs 26732 _reflns.number_all 27933 _reflns.percent_possible_obs 95.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3KJN _refine.ls_number_reflns_obs 24018 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.94 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 95.70 _refine.ls_R_factor_obs 0.17025 _refine.ls_R_factor_all 0.17025 _refine.ls_R_factor_R_work 0.16674 _refine.ls_R_factor_R_free 0.20224 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.2 _refine.ls_number_reflns_R_free 2714 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 9.420 _refine.aniso_B[1][1] -0.25 _refine.aniso_B[2][2] -0.25 _refine.aniso_B[3][3] 0.37 _refine.aniso_B[1][2] -0.12 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.121 _refine.pdbx_overall_ESU_R_Free 0.116 _refine.overall_SU_ML 0.066 _refine.overall_SU_B 3.925 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1906 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 243 _refine_hist.number_atoms_total 2200 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 19.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 2022 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1347 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.202 1.994 ? 2742 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.850 3.001 ? 3309 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.725 5.000 ? 248 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.334 24.944 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.108 15.000 ? 348 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.978 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.071 0.200 ? 299 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2237 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 376 'X-RAY DIFFRACTION' ? r_nbd_refined 0.191 0.200 ? 368 'X-RAY DIFFRACTION' ? r_nbd_other 0.181 0.200 ? 1433 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.181 0.200 ? 989 'X-RAY DIFFRACTION' ? r_nbtor_other 0.081 0.200 ? 993 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.123 0.200 ? 171 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.119 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.198 0.200 ? 50 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.072 0.200 ? 21 'X-RAY DIFFRACTION' ? r_mcbond_it 0.428 1.500 ? 1250 'X-RAY DIFFRACTION' ? r_mcbond_other 0.089 1.500 ? 489 'X-RAY DIFFRACTION' ? r_mcangle_it 0.680 2.000 ? 1979 'X-RAY DIFFRACTION' ? r_scbond_it 1.318 3.000 ? 864 'X-RAY DIFFRACTION' ? r_scangle_it 2.064 4.500 ? 759 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 1483 _refine_ls_shell.R_factor_R_work 0.210 _refine_ls_shell.percent_reflns_obs 81.73 _refine_ls_shell.R_factor_R_free 0.218 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 163 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3KJN _struct.title 'Caspase 8 bound to a covalent inhibitor' _struct.pdbx_descriptor 'Caspase-8 (E.C.3.4.22.61)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KJN _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'caspase 8, kinetics, Peptidomimetic Inhibitor, urazole, Thiol protease, Zymogen, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 34 ? VAL A 41 ? PHE A 244 VAL A 251 1 ? 8 HELX_P HELX_P2 2 PRO A 42 ? HIS A 45 ? PRO A 252 HIS A 255 5 ? 4 HELX_P HELX_P3 3 GLY A 52 ? LEU A 67 ? GLY A 262 LEU A 277 1 ? 16 HELX_P HELX_P4 4 THR A 78 ? MET A 92 ? THR A 288 MET A 302 1 ? 15 HELX_P HELX_P5 5 ILE A 123 ? SER A 128 ? ILE A 333 SER A 338 1 ? 6 HELX_P HELX_P6 6 GLN A 129 ? THR A 131 ? GLN A 339 THR A 341 5 ? 3 HELX_P HELX_P7 7 CYS A 135 ? ALA A 139 ? CYS A 345 ALA A 349 5 ? 5 HELX_P HELX_P8 8 TRP B 36 ? CYS B 49 ? TRP B 420 CYS B 433 1 ? 14 HELX_P HELX_P9 9 PRO B 50 ? GLY B 52 ? PRO B 434 GLY B 436 5 ? 3 HELX_P HELX_P10 10 ASP B 54 ? ASN B 68 ? ASP B 438 ASN B 452 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 150 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_comp_id B93 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 360 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id B93 _struct_conn.ptnr2_auth_seq_id 950 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.815 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 21 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 231 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 22 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 232 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.40 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 70 ? ASP A 75 ? GLU A 280 ASP A 285 A 2 TYR A 25 ? ASN A 30 ? TYR A 235 ASN A 240 A 3 PHE A 100 ? LEU A 105 ? PHE A 310 LEU A 315 A 4 LYS A 143 ? GLN A 148 ? LYS A 353 GLN A 358 A 5 PHE B 15 ? MET B 19 ? PHE B 399 MET B 403 A 6 GLN B 81 ? PHE B 84 ? GLN B 465 PHE B 468 B 1 GLY A 108 ? ASP A 109 ? GLY A 318 ASP A 319 B 2 ILE A 112 ? TYR A 114 ? ILE A 322 TYR A 324 B 3 GLU A 120 ? PRO A 122 ? GLU A 330 PRO A 332 C 1 ARG B 29 ? ASN B 30 ? ARG B 413 ASN B 414 C 2 GLY B 34 ? THR B 35 ? GLY B 418 THR B 419 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 74 ? O HIS A 284 N ASN A 30 ? N ASN A 240 A 2 3 N ILE A 29 ? N ILE A 239 O LEU A 105 ? O LEU A 315 A 3 4 N ILE A 104 ? N ILE A 314 O GLN A 148 ? O GLN A 358 A 4 5 N PHE A 145 ? N PHE A 355 O GLY B 18 ? O GLY B 402 A 5 6 N LEU B 17 ? N LEU B 401 O THR B 83 ? O THR B 467 B 1 2 N ASP A 109 ? N ASP A 319 O ILE A 112 ? O ILE A 322 B 2 3 N ILE A 113 ? N ILE A 323 O ALA A 121 ? O ALA A 331 C 1 2 N ASN B 30 ? N ASN B 414 O GLY B 34 ? O GLY B 418 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE DTT A 900' AC2 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE B93 A 950' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 THR A 127 ? THR A 337 . ? 1_555 ? 2 AC1 9 SER A 128 ? SER A 338 . ? 1_555 ? 3 AC1 9 THR A 131 ? THR A 341 . ? 1_555 ? 4 AC1 9 HOH E . ? HOH A 536 . ? 1_555 ? 5 AC1 9 HOH E . ? HOH A 577 . ? 1_555 ? 6 AC1 9 GLU B 12 ? GLU B 396 . ? 1_555 ? 7 AC1 9 THR B 83 ? THR B 467 . ? 1_555 ? 8 AC1 9 THR B 85 ? THR B 469 . ? 1_555 ? 9 AC1 9 HOH F . ? HOH B 579 . ? 6_555 ? 10 AC2 13 ARG A 50 ? ARG A 260 . ? 1_555 ? 11 AC2 13 HIS A 107 ? HIS A 317 . ? 1_555 ? 12 AC2 13 GLY A 108 ? GLY A 318 . ? 1_555 ? 13 AC2 13 GLN A 148 ? GLN A 358 . ? 1_555 ? 14 AC2 13 CYS A 150 ? CYS A 360 . ? 1_555 ? 15 AC2 13 HOH E . ? HOH A 523 . ? 1_555 ? 16 AC2 13 HOH E . ? HOH A 613 . ? 1_555 ? 17 AC2 13 HOH E . ? HOH A 748 . ? 1_555 ? 18 AC2 13 SER B 27 ? SER B 411 . ? 1_555 ? 19 AC2 13 ARG B 29 ? ARG B 413 . ? 1_555 ? 20 AC2 13 ASN B 30 ? ASN B 414 . ? 1_555 ? 21 AC2 13 PRO B 31 ? PRO B 415 . ? 1_555 ? 22 AC2 13 TRP B 36 ? TRP B 420 . ? 1_555 ? # _database_PDB_matrix.entry_id 3KJN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KJN _atom_sites.fract_transf_matrix[1][1] 0.015975 _atom_sites.fract_transf_matrix[1][2] 0.009223 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018446 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007729 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 211 ? ? ? A . n A 1 2 PRO 2 212 ? ? ? A . n A 1 3 ARG 3 213 ? ? ? A . n A 1 4 GLU 4 214 ? ? ? A . n A 1 5 GLN 5 215 ? ? ? A . n A 1 6 ASP 6 216 ? ? ? A . n A 1 7 SER 7 217 ? ? ? A . n A 1 8 GLU 8 218 ? ? ? A . n A 1 9 SER 9 219 ? ? ? A . n A 1 10 GLN 10 220 ? ? ? A . n A 1 11 THR 11 221 ? ? ? A . n A 1 12 LEU 12 222 ? ? ? A . n A 1 13 ASP 13 223 223 ASP ASP A . n A 1 14 LYS 14 224 224 LYS LYS A . n A 1 15 VAL 15 225 225 VAL VAL A . n A 1 16 TYR 16 226 226 TYR TYR A . n A 1 17 GLN 17 227 227 GLN GLN A . n A 1 18 MET 18 228 228 MET MET A . n A 1 19 LYS 19 229 229 LYS LYS A . n A 1 20 SER 20 230 230 SER SER A . n A 1 21 LYS 21 231 231 LYS LYS A . n A 1 22 PRO 22 232 232 PRO PRO A . n A 1 23 ARG 23 233 233 ARG ARG A . n A 1 24 GLY 24 234 234 GLY GLY A . n A 1 25 TYR 25 235 235 TYR TYR A . n A 1 26 CYS 26 236 236 CYS CYS A . n A 1 27 LEU 27 237 237 LEU LEU A . n A 1 28 ILE 28 238 238 ILE ILE A . n A 1 29 ILE 29 239 239 ILE ILE A . n A 1 30 ASN 30 240 240 ASN ASN A . n A 1 31 ASN 31 241 241 ASN ASN A . n A 1 32 HIS 32 242 242 HIS HIS A . n A 1 33 ASN 33 243 243 ASN ASN A . n A 1 34 PHE 34 244 244 PHE PHE A . n A 1 35 ALA 35 245 245 ALA ALA A . n A 1 36 LYS 36 246 246 LYS LYS A . n A 1 37 ALA 37 247 247 ALA ALA A . n A 1 38 ARG 38 248 248 ARG ARG A . n A 1 39 GLU 39 249 249 GLU GLU A . n A 1 40 LYS 40 250 250 LYS LYS A . n A 1 41 VAL 41 251 251 VAL VAL A . n A 1 42 PRO 42 252 252 PRO PRO A . n A 1 43 LYS 43 253 253 LYS LYS A . n A 1 44 LEU 44 254 254 LEU LEU A . n A 1 45 HIS 45 255 255 HIS HIS A . n A 1 46 SER 46 256 256 SER SER A . n A 1 47 ILE 47 257 257 ILE ILE A . n A 1 48 ARG 48 258 258 ARG ARG A . n A 1 49 ASP 49 259 259 ASP ASP A . n A 1 50 ARG 50 260 260 ARG ARG A . n A 1 51 ASN 51 261 261 ASN ASN A . n A 1 52 GLY 52 262 262 GLY GLY A . n A 1 53 THR 53 263 263 THR THR A . n A 1 54 HIS 54 264 264 HIS HIS A . n A 1 55 LEU 55 265 265 LEU LEU A . n A 1 56 ASP 56 266 266 ASP ASP A . n A 1 57 ALA 57 267 267 ALA ALA A . n A 1 58 GLY 58 268 268 GLY GLY A . n A 1 59 ALA 59 269 269 ALA ALA A . n A 1 60 LEU 60 270 270 LEU LEU A . n A 1 61 THR 61 271 271 THR THR A . n A 1 62 THR 62 272 272 THR THR A . n A 1 63 THR 63 273 273 THR THR A . n A 1 64 PHE 64 274 274 PHE PHE A . n A 1 65 GLU 65 275 275 GLU GLU A . n A 1 66 GLU 66 276 276 GLU GLU A . n A 1 67 LEU 67 277 277 LEU LEU A . n A 1 68 HIS 68 278 278 HIS HIS A . n A 1 69 PHE 69 279 279 PHE PHE A . n A 1 70 GLU 70 280 280 GLU GLU A . n A 1 71 ILE 71 281 281 ILE ILE A . n A 1 72 LYS 72 282 282 LYS LYS A . n A 1 73 PRO 73 283 283 PRO PRO A . n A 1 74 HIS 74 284 284 HIS HIS A . n A 1 75 ASP 75 285 285 ASP ASP A . n A 1 76 ASP 76 286 286 ASP ASP A . n A 1 77 CYS 77 287 287 CYS CYS A . n A 1 78 THR 78 288 288 THR THR A . n A 1 79 VAL 79 289 289 VAL VAL A . n A 1 80 GLU 80 290 290 GLU GLU A . n A 1 81 GLN 81 291 291 GLN GLN A . n A 1 82 ILE 82 292 292 ILE ILE A . n A 1 83 TYR 83 293 293 TYR TYR A . n A 1 84 GLU 84 294 294 GLU GLU A . n A 1 85 ILE 85 295 295 ILE ILE A . n A 1 86 LEU 86 296 296 LEU LEU A . n A 1 87 LYS 87 297 297 LYS LYS A . n A 1 88 ILE 88 298 298 ILE ILE A . n A 1 89 TYR 89 299 299 TYR TYR A . n A 1 90 GLN 90 300 300 GLN GLN A . n A 1 91 LEU 91 301 301 LEU LEU A . n A 1 92 MET 92 302 302 MET MET A . n A 1 93 ASP 93 303 303 ASP ASP A . n A 1 94 HIS 94 304 304 HIS HIS A . n A 1 95 SER 95 305 305 SER SER A . n A 1 96 ASN 96 306 306 ASN ASN A . n A 1 97 MET 97 307 307 MET MET A . n A 1 98 ASP 98 308 308 ASP ASP A . n A 1 99 CYS 99 309 309 CYS CYS A . n A 1 100 PHE 100 310 310 PHE PHE A . n A 1 101 ILE 101 311 311 ILE ILE A . n A 1 102 CYS 102 312 312 CYS CYS A . n A 1 103 CYS 103 313 313 CYS CYS A . n A 1 104 ILE 104 314 314 ILE ILE A . n A 1 105 LEU 105 315 315 LEU LEU A . n A 1 106 SER 106 316 316 SER SER A . n A 1 107 HIS 107 317 317 HIS HIS A . n A 1 108 GLY 108 318 318 GLY GLY A . n A 1 109 ASP 109 319 319 ASP ASP A . n A 1 110 LYS 110 320 320 LYS LYS A . n A 1 111 GLY 111 321 321 GLY GLY A . n A 1 112 ILE 112 322 322 ILE ILE A . n A 1 113 ILE 113 323 323 ILE ILE A . n A 1 114 TYR 114 324 324 TYR TYR A . n A 1 115 GLY 115 325 325 GLY GLY A . n A 1 116 THR 116 326 326 THR THR A . n A 1 117 ASP 117 327 327 ASP ASP A . n A 1 118 GLY 118 328 328 GLY GLY A . n A 1 119 GLN 119 329 329 GLN GLN A . n A 1 120 GLU 120 330 330 GLU GLU A . n A 1 121 ALA 121 331 331 ALA ALA A . n A 1 122 PRO 122 332 332 PRO PRO A . n A 1 123 ILE 123 333 333 ILE ILE A . n A 1 124 TYR 124 334 334 TYR TYR A . n A 1 125 GLU 125 335 335 GLU GLU A . n A 1 126 LEU 126 336 336 LEU LEU A . n A 1 127 THR 127 337 337 THR THR A . n A 1 128 SER 128 338 338 SER SER A . n A 1 129 GLN 129 339 339 GLN GLN A . n A 1 130 PHE 130 340 340 PHE PHE A . n A 1 131 THR 131 341 341 THR THR A . n A 1 132 GLY 132 342 342 GLY GLY A . n A 1 133 LEU 133 343 343 LEU LEU A . n A 1 134 LYS 134 344 344 LYS LYS A . n A 1 135 CYS 135 345 345 CYS CYS A . n A 1 136 PRO 136 346 346 PRO PRO A . n A 1 137 SER 137 347 347 SER SER A . n A 1 138 LEU 138 348 348 LEU LEU A . n A 1 139 ALA 139 349 349 ALA ALA A . n A 1 140 GLY 140 350 350 GLY GLY A . n A 1 141 LYS 141 351 351 LYS LYS A . n A 1 142 PRO 142 352 352 PRO PRO A . n A 1 143 LYS 143 353 353 LYS LYS A . n A 1 144 VAL 144 354 354 VAL VAL A . n A 1 145 PHE 145 355 355 PHE PHE A . n A 1 146 PHE 146 356 356 PHE PHE A . n A 1 147 ILE 147 357 357 ILE ILE A . n A 1 148 GLN 148 358 358 GLN GLN A . n A 1 149 ALA 149 359 359 ALA ALA A . n A 1 150 CYS 150 360 360 CYS CYS A . n A 1 151 GLN 151 361 361 GLN GLN A . n A 1 152 GLY 152 362 362 GLY GLY A . n A 1 153 ASP 153 363 363 ASP ASP A . n A 1 154 ASN 154 364 364 ASN ASN A . n A 1 155 TYR 155 365 365 TYR TYR A . n A 1 156 GLN 156 366 366 GLN GLN A . n A 1 157 LYS 157 367 367 LYS LYS A . n A 1 158 GLY 158 368 368 GLY GLY A . n A 1 159 ILE 159 369 369 ILE ILE A . n A 1 160 PRO 160 370 370 PRO PRO A . n A 1 161 VAL 161 371 371 VAL VAL A . n A 1 162 GLU 162 372 372 GLU GLU A . n A 1 163 THR 163 373 373 THR THR A . n A 1 164 ASP 164 374 374 ASP ASP A . n B 2 1 LEU 1 385 ? ? ? B . n B 2 2 SER 2 386 ? ? ? B . n B 2 3 SER 3 387 ? ? ? B . n B 2 4 PRO 4 388 ? ? ? B . n B 2 5 GLN 5 389 ? ? ? B . n B 2 6 THR 6 390 390 THR THR B . n B 2 7 ARG 7 391 391 ARG ARG B . n B 2 8 TYR 8 392 392 TYR TYR B . n B 2 9 ILE 9 393 393 ILE ILE B . n B 2 10 PRO 10 394 394 PRO PRO B . n B 2 11 ASP 11 395 395 ASP ASP B . n B 2 12 GLU 12 396 396 GLU GLU B . n B 2 13 ALA 13 397 397 ALA ALA B . n B 2 14 ASP 14 398 398 ASP ASP B . n B 2 15 PHE 15 399 399 PHE PHE B . n B 2 16 LEU 16 400 400 LEU LEU B . n B 2 17 LEU 17 401 401 LEU LEU B . n B 2 18 GLY 18 402 402 GLY GLY B . n B 2 19 MET 19 403 403 MET MET B . n B 2 20 ALA 20 404 404 ALA ALA B . n B 2 21 THR 21 405 405 THR THR B . n B 2 22 VAL 22 406 406 VAL VAL B . n B 2 23 ASN 23 407 407 ASN ASN B . n B 2 24 ASN 24 408 408 ASN ASN B . n B 2 25 CYS 25 409 409 CYS CYS B . n B 2 26 VAL 26 410 410 VAL VAL B . n B 2 27 SER 27 411 411 SER SER B . n B 2 28 TYR 28 412 412 TYR TYR B . n B 2 29 ARG 29 413 413 ARG ARG B . n B 2 30 ASN 30 414 414 ASN ASN B . n B 2 31 PRO 31 415 415 PRO PRO B . n B 2 32 ALA 32 416 416 ALA ALA B . n B 2 33 GLU 33 417 417 GLU GLU B . n B 2 34 GLY 34 418 418 GLY GLY B . n B 2 35 THR 35 419 419 THR THR B . n B 2 36 TRP 36 420 420 TRP TRP B . n B 2 37 TYR 37 421 421 TYR TYR B . n B 2 38 ILE 38 422 422 ILE ILE B . n B 2 39 GLN 39 423 423 GLN GLN B . n B 2 40 SER 40 424 424 SER SER B . n B 2 41 LEU 41 425 425 LEU LEU B . n B 2 42 CYS 42 426 426 CYS CYS B . n B 2 43 GLN 43 427 427 GLN GLN B . n B 2 44 SER 44 428 428 SER SER B . n B 2 45 LEU 45 429 429 LEU LEU B . n B 2 46 ARG 46 430 430 ARG ARG B . n B 2 47 GLU 47 431 431 GLU GLU B . n B 2 48 ARG 48 432 432 ARG ARG B . n B 2 49 CYS 49 433 433 CYS CYS B . n B 2 50 PRO 50 434 434 PRO PRO B . n B 2 51 ARG 51 435 435 ARG ARG B . n B 2 52 GLY 52 436 436 GLY GLY B . n B 2 53 ASP 53 437 437 ASP ASP B . n B 2 54 ASP 54 438 438 ASP ASP B . n B 2 55 ILE 55 439 439 ILE ILE B . n B 2 56 LEU 56 440 440 LEU LEU B . n B 2 57 THR 57 441 441 THR THR B . n B 2 58 ILE 58 442 442 ILE ILE B . n B 2 59 LEU 59 443 443 LEU LEU B . n B 2 60 THR 60 444 444 THR THR B . n B 2 61 GLU 61 445 445 GLU GLU B . n B 2 62 VAL 62 446 446 VAL VAL B . n B 2 63 ASN 63 447 447 ASN ASN B . n B 2 64 TYR 64 448 448 TYR TYR B . n B 2 65 GLU 65 449 449 GLU GLU B . n B 2 66 VAL 66 450 450 VAL VAL B . n B 2 67 SER 67 451 451 SER SER B . n B 2 68 ASN 68 452 452 ASN ASN B . n B 2 69 LYS 69 453 453 LYS LYS B . n B 2 70 ASP 70 454 454 ASP ASP B . n B 2 71 ASP 71 455 455 ASP ASP B . n B 2 72 LYS 72 456 456 LYS LYS B . n B 2 73 LYS 73 457 457 LYS LYS B . n B 2 74 ASN 74 458 458 ASN ASN B . n B 2 75 MET 75 459 459 MET MET B . n B 2 76 GLY 76 460 460 GLY GLY B . n B 2 77 LYS 77 461 461 LYS LYS B . n B 2 78 GLN 78 462 462 GLN GLN B . n B 2 79 MET 79 463 463 MET MET B . n B 2 80 PRO 80 464 464 PRO PRO B . n B 2 81 GLN 81 465 465 GLN GLN B . n B 2 82 PRO 82 466 466 PRO PRO B . n B 2 83 THR 83 467 467 THR THR B . n B 2 84 PHE 84 468 468 PHE PHE B . n B 2 85 THR 85 469 469 THR THR B . n B 2 86 LEU 86 470 470 LEU LEU B . n B 2 87 ARG 87 471 471 ARG ARG B . n B 2 88 LYS 88 472 472 LYS LYS B . n B 2 89 LYS 89 473 473 LYS LYS B . n B 2 90 LEU 90 474 474 LEU LEU B . n B 2 91 VAL 91 475 475 VAL VAL B . n B 2 92 PHE 92 476 476 PHE PHE B . n B 2 93 PRO 93 477 477 PRO PRO B . n B 2 94 SER 94 478 478 SER SER B . n B 2 95 ASP 95 479 479 ASP ASP B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13740 ? 1 MORE -89 ? 1 'SSA (A^2)' 18500 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 43.1296666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 608 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -3.2470 _pdbx_refine_tls.origin_y 29.5916 _pdbx_refine_tls.origin_z 27.0817 _pdbx_refine_tls.T[1][1] -0.1395 _pdbx_refine_tls.T[2][2] -0.1136 _pdbx_refine_tls.T[3][3] -0.1061 _pdbx_refine_tls.T[1][2] -0.0060 _pdbx_refine_tls.T[1][3] -0.0101 _pdbx_refine_tls.T[2][3] 0.0113 _pdbx_refine_tls.L[1][1] 0.8606 _pdbx_refine_tls.L[2][2] 0.8435 _pdbx_refine_tls.L[3][3] 1.5520 _pdbx_refine_tls.L[1][2] 0.1432 _pdbx_refine_tls.L[1][3] -0.0881 _pdbx_refine_tls.L[2][3] 0.2637 _pdbx_refine_tls.S[1][1] -0.0036 _pdbx_refine_tls.S[1][2] -0.0152 _pdbx_refine_tls.S[1][3] 0.0405 _pdbx_refine_tls.S[2][1] 0.0236 _pdbx_refine_tls.S[2][2] 0.0103 _pdbx_refine_tls.S[2][3] -0.0307 _pdbx_refine_tls.S[3][1] -0.0168 _pdbx_refine_tls.S[3][2] 0.0190 _pdbx_refine_tls.S[3][3] -0.0068 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 223 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 479 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 228 ? ? -150.14 70.54 2 1 ASP A 286 ? ? 57.21 70.86 3 1 ASN B 408 ? ? 81.39 -6.01 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 258 ? NE ? A ARG 48 NE 2 1 Y 1 A ARG 258 ? CZ ? A ARG 48 CZ 3 1 Y 1 A ARG 258 ? NH1 ? A ARG 48 NH1 4 1 Y 1 A ARG 258 ? NH2 ? A ARG 48 NH2 5 1 Y 1 A GLU 290 ? CG ? A GLU 80 CG 6 1 Y 1 A GLU 290 ? CD ? A GLU 80 CD 7 1 Y 1 A GLU 290 ? OE1 ? A GLU 80 OE1 8 1 Y 1 A GLU 290 ? OE2 ? A GLU 80 OE2 9 1 Y 1 A GLU 372 ? CG ? A GLU 162 CG 10 1 Y 1 A GLU 372 ? CD ? A GLU 162 CD 11 1 Y 1 A GLU 372 ? OE1 ? A GLU 162 OE1 12 1 Y 1 A GLU 372 ? OE2 ? A GLU 162 OE2 13 1 Y 1 B ARG 391 ? CG ? B ARG 7 CG 14 1 Y 1 B ARG 391 ? CD ? B ARG 7 CD 15 1 Y 1 B ARG 391 ? NE ? B ARG 7 NE 16 1 Y 1 B ARG 391 ? CZ ? B ARG 7 CZ 17 1 Y 1 B ARG 391 ? NH1 ? B ARG 7 NH1 18 1 Y 1 B ARG 391 ? NH2 ? B ARG 7 NH2 19 1 Y 1 B GLU 431 ? CG ? B GLU 47 CG 20 1 Y 1 B GLU 431 ? CD ? B GLU 47 CD 21 1 Y 1 B GLU 431 ? OE1 ? B GLU 47 OE1 22 1 Y 1 B GLU 431 ? OE2 ? B GLU 47 OE2 23 1 Y 1 B LYS 457 ? CG ? B LYS 73 CG 24 1 Y 1 B LYS 457 ? CD ? B LYS 73 CD 25 1 Y 1 B LYS 457 ? CE ? B LYS 73 CE 26 1 Y 1 B LYS 457 ? NZ ? B LYS 73 NZ 27 1 Y 1 B ASP 479 ? CG ? B ASP 95 CG 28 1 Y 1 B ASP 479 ? OD1 ? B ASP 95 OD1 29 1 Y 1 B ASP 479 ? OD2 ? B ASP 95 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 211 ? A SER 1 2 1 Y 1 A PRO 212 ? A PRO 2 3 1 Y 1 A ARG 213 ? A ARG 3 4 1 Y 1 A GLU 214 ? A GLU 4 5 1 Y 1 A GLN 215 ? A GLN 5 6 1 Y 1 A ASP 216 ? A ASP 6 7 1 Y 1 A SER 217 ? A SER 7 8 1 Y 1 A GLU 218 ? A GLU 8 9 1 Y 1 A SER 219 ? A SER 9 10 1 Y 1 A GLN 220 ? A GLN 10 11 1 Y 1 A THR 221 ? A THR 11 12 1 Y 1 A LEU 222 ? A LEU 12 13 1 Y 1 B LEU 385 ? B LEU 1 14 1 Y 1 B SER 386 ? B SER 2 15 1 Y 1 B SER 387 ? B SER 3 16 1 Y 1 B PRO 388 ? B PRO 4 17 1 Y 1 B GLN 389 ? B GLN 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 4 ;(3S)-3-({[(5S)-2-{2-[(1H-benzimidazol-5-ylcarbonyl)amino]ethyl}-7-(cyclohexylmethyl)-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazin-5-yl]carbonyl}amino)-4-oxopentanoic acid ; B93 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DTT 1 900 900 DTT DTT A . D 4 B93 1 950 950 B93 B93 A . E 5 HOH 1 484 484 HOH HOH A . E 5 HOH 2 492 492 HOH HOH A . E 5 HOH 3 494 494 HOH HOH A . E 5 HOH 4 499 499 HOH HOH A . E 5 HOH 5 500 500 HOH HOH A . E 5 HOH 6 501 501 HOH HOH A . E 5 HOH 7 502 502 HOH HOH A . E 5 HOH 8 503 503 HOH HOH A . E 5 HOH 9 506 506 HOH HOH A . E 5 HOH 10 507 507 HOH HOH A . E 5 HOH 11 508 508 HOH HOH A . E 5 HOH 12 509 509 HOH HOH A . E 5 HOH 13 510 510 HOH HOH A . E 5 HOH 14 512 512 HOH HOH A . E 5 HOH 15 514 514 HOH HOH A . E 5 HOH 16 515 515 HOH HOH A . E 5 HOH 17 517 517 HOH HOH A . E 5 HOH 18 521 521 HOH HOH A . E 5 HOH 19 522 522 HOH HOH A . E 5 HOH 20 523 523 HOH HOH A . E 5 HOH 21 524 524 HOH HOH A . E 5 HOH 22 525 525 HOH HOH A . E 5 HOH 23 526 526 HOH HOH A . E 5 HOH 24 527 527 HOH HOH A . E 5 HOH 25 530 530 HOH HOH A . E 5 HOH 26 531 531 HOH HOH A . E 5 HOH 27 533 533 HOH HOH A . E 5 HOH 28 534 534 HOH HOH A . E 5 HOH 29 536 536 HOH HOH A . E 5 HOH 30 538 538 HOH HOH A . E 5 HOH 31 541 541 HOH HOH A . E 5 HOH 32 543 543 HOH HOH A . E 5 HOH 33 545 545 HOH HOH A . E 5 HOH 34 547 547 HOH HOH A . E 5 HOH 35 548 548 HOH HOH A . E 5 HOH 36 549 549 HOH HOH A . E 5 HOH 37 550 550 HOH HOH A . E 5 HOH 38 551 551 HOH HOH A . E 5 HOH 39 552 552 HOH HOH A . E 5 HOH 40 553 553 HOH HOH A . E 5 HOH 41 554 554 HOH HOH A . E 5 HOH 42 555 555 HOH HOH A . E 5 HOH 43 557 557 HOH HOH A . E 5 HOH 44 558 558 HOH HOH A . E 5 HOH 45 559 559 HOH HOH A . E 5 HOH 46 560 560 HOH HOH A . E 5 HOH 47 562 562 HOH HOH A . E 5 HOH 48 565 565 HOH HOH A . E 5 HOH 49 566 566 HOH HOH A . E 5 HOH 50 567 567 HOH HOH A . E 5 HOH 51 568 568 HOH HOH A . E 5 HOH 52 569 569 HOH HOH A . E 5 HOH 53 572 572 HOH HOH A . E 5 HOH 54 573 573 HOH HOH A . E 5 HOH 55 575 575 HOH HOH A . E 5 HOH 56 577 577 HOH HOH A . E 5 HOH 57 578 578 HOH HOH A . E 5 HOH 58 580 580 HOH HOH A . E 5 HOH 59 581 581 HOH HOH A . E 5 HOH 60 582 582 HOH HOH A . E 5 HOH 61 584 584 HOH HOH A . E 5 HOH 62 587 587 HOH HOH A . E 5 HOH 63 589 589 HOH HOH A . E 5 HOH 64 590 590 HOH HOH A . E 5 HOH 65 591 591 HOH HOH A . E 5 HOH 66 592 592 HOH HOH A . E 5 HOH 67 593 593 HOH HOH A . E 5 HOH 68 594 594 HOH HOH A . E 5 HOH 69 595 595 HOH HOH A . E 5 HOH 70 597 597 HOH HOH A . E 5 HOH 71 599 599 HOH HOH A . E 5 HOH 72 600 600 HOH HOH A . E 5 HOH 73 601 601 HOH HOH A . E 5 HOH 74 602 602 HOH HOH A . E 5 HOH 75 604 604 HOH HOH A . E 5 HOH 76 606 606 HOH HOH A . E 5 HOH 77 607 607 HOH HOH A . E 5 HOH 78 609 609 HOH HOH A . E 5 HOH 79 610 610 HOH HOH A . E 5 HOH 80 611 611 HOH HOH A . E 5 HOH 81 613 613 HOH HOH A . E 5 HOH 82 615 615 HOH HOH A . E 5 HOH 83 616 616 HOH HOH A . E 5 HOH 84 617 617 HOH HOH A . E 5 HOH 85 619 619 HOH HOH A . E 5 HOH 86 620 620 HOH HOH A . E 5 HOH 87 621 621 HOH HOH A . E 5 HOH 88 623 623 HOH HOH A . E 5 HOH 89 624 624 HOH HOH A . E 5 HOH 90 625 625 HOH HOH A . E 5 HOH 91 632 632 HOH HOH A . E 5 HOH 92 635 635 HOH HOH A . E 5 HOH 93 637 637 HOH HOH A . E 5 HOH 94 639 639 HOH HOH A . E 5 HOH 95 640 640 HOH HOH A . E 5 HOH 96 641 641 HOH HOH A . E 5 HOH 97 642 642 HOH HOH A . E 5 HOH 98 643 643 HOH HOH A . E 5 HOH 99 644 644 HOH HOH A . E 5 HOH 100 645 645 HOH HOH A . E 5 HOH 101 646 646 HOH HOH A . E 5 HOH 102 648 648 HOH HOH A . E 5 HOH 103 650 650 HOH HOH A . E 5 HOH 104 651 651 HOH HOH A . E 5 HOH 105 652 652 HOH HOH A . E 5 HOH 106 653 653 HOH HOH A . E 5 HOH 107 654 654 HOH HOH A . E 5 HOH 108 655 655 HOH HOH A . E 5 HOH 109 657 657 HOH HOH A . E 5 HOH 110 658 658 HOH HOH A . E 5 HOH 111 661 661 HOH HOH A . E 5 HOH 112 665 665 HOH HOH A . E 5 HOH 113 667 667 HOH HOH A . E 5 HOH 114 669 669 HOH HOH A . E 5 HOH 115 670 670 HOH HOH A . E 5 HOH 116 671 671 HOH HOH A . E 5 HOH 117 672 672 HOH HOH A . E 5 HOH 118 674 674 HOH HOH A . E 5 HOH 119 675 675 HOH HOH A . E 5 HOH 120 677 677 HOH HOH A . E 5 HOH 121 678 678 HOH HOH A . E 5 HOH 122 680 680 HOH HOH A . E 5 HOH 123 682 682 HOH HOH A . E 5 HOH 124 683 683 HOH HOH A . E 5 HOH 125 684 684 HOH HOH A . E 5 HOH 126 685 685 HOH HOH A . E 5 HOH 127 687 687 HOH HOH A . E 5 HOH 128 688 688 HOH HOH A . E 5 HOH 129 693 693 HOH HOH A . E 5 HOH 130 694 694 HOH HOH A . E 5 HOH 131 697 697 HOH HOH A . E 5 HOH 132 698 698 HOH HOH A . E 5 HOH 133 699 699 HOH HOH A . E 5 HOH 134 700 700 HOH HOH A . E 5 HOH 135 704 704 HOH HOH A . E 5 HOH 136 705 705 HOH HOH A . E 5 HOH 137 707 707 HOH HOH A . E 5 HOH 138 709 709 HOH HOH A . E 5 HOH 139 710 710 HOH HOH A . E 5 HOH 140 711 711 HOH HOH A . E 5 HOH 141 714 714 HOH HOH A . E 5 HOH 142 716 716 HOH HOH A . E 5 HOH 143 718 718 HOH HOH A . E 5 HOH 144 719 719 HOH HOH A . E 5 HOH 145 725 725 HOH HOH A . E 5 HOH 146 726 726 HOH HOH A . E 5 HOH 147 727 727 HOH HOH A . E 5 HOH 148 730 730 HOH HOH A . E 5 HOH 149 731 731 HOH HOH A . E 5 HOH 150 733 733 HOH HOH A . E 5 HOH 151 737 737 HOH HOH A . E 5 HOH 152 739 739 HOH HOH A . E 5 HOH 153 741 741 HOH HOH A . E 5 HOH 154 745 745 HOH HOH A . E 5 HOH 155 746 746 HOH HOH A . E 5 HOH 156 747 747 HOH HOH A . E 5 HOH 157 748 748 HOH HOH A . E 5 HOH 158 750 750 HOH HOH A . E 5 HOH 159 752 752 HOH HOH A . E 5 HOH 160 755 755 HOH HOH A . E 5 HOH 161 756 756 HOH HOH A . E 5 HOH 162 758 758 HOH HOH A . E 5 HOH 163 759 759 HOH HOH A . E 5 HOH 164 760 760 HOH HOH A . E 5 HOH 165 761 761 HOH HOH A . E 5 HOH 166 762 762 HOH HOH A . F 5 HOH 1 483 483 HOH HOH B . F 5 HOH 2 485 485 HOH HOH B . F 5 HOH 3 486 486 HOH HOH B . F 5 HOH 4 487 487 HOH HOH B . F 5 HOH 5 488 488 HOH HOH B . F 5 HOH 6 489 489 HOH HOH B . F 5 HOH 7 490 490 HOH HOH B . F 5 HOH 8 491 491 HOH HOH B . F 5 HOH 9 493 493 HOH HOH B . F 5 HOH 10 495 495 HOH HOH B . F 5 HOH 11 496 496 HOH HOH B . F 5 HOH 12 497 497 HOH HOH B . F 5 HOH 13 498 498 HOH HOH B . F 5 HOH 14 511 511 HOH HOH B . F 5 HOH 15 513 513 HOH HOH B . F 5 HOH 16 516 516 HOH HOH B . F 5 HOH 17 518 518 HOH HOH B . F 5 HOH 18 520 520 HOH HOH B . F 5 HOH 19 528 528 HOH HOH B . F 5 HOH 20 529 529 HOH HOH B . F 5 HOH 21 532 532 HOH HOH B . F 5 HOH 22 535 535 HOH HOH B . F 5 HOH 23 537 537 HOH HOH B . F 5 HOH 24 539 539 HOH HOH B . F 5 HOH 25 540 540 HOH HOH B . F 5 HOH 26 542 542 HOH HOH B . F 5 HOH 27 544 544 HOH HOH B . F 5 HOH 28 546 546 HOH HOH B . F 5 HOH 29 556 556 HOH HOH B . F 5 HOH 30 561 561 HOH HOH B . F 5 HOH 31 563 563 HOH HOH B . F 5 HOH 32 564 564 HOH HOH B . F 5 HOH 33 570 570 HOH HOH B . F 5 HOH 34 571 571 HOH HOH B . F 5 HOH 35 574 574 HOH HOH B . F 5 HOH 36 576 576 HOH HOH B . F 5 HOH 37 579 579 HOH HOH B . F 5 HOH 38 583 583 HOH HOH B . F 5 HOH 39 585 585 HOH HOH B . F 5 HOH 40 588 588 HOH HOH B . F 5 HOH 41 598 598 HOH HOH B . F 5 HOH 42 605 605 HOH HOH B . F 5 HOH 43 608 608 HOH HOH B . F 5 HOH 44 612 612 HOH HOH B . F 5 HOH 45 618 618 HOH HOH B . F 5 HOH 46 622 622 HOH HOH B . F 5 HOH 47 627 627 HOH HOH B . F 5 HOH 48 628 628 HOH HOH B . F 5 HOH 49 649 649 HOH HOH B . F 5 HOH 50 656 656 HOH HOH B . F 5 HOH 51 659 659 HOH HOH B . F 5 HOH 52 660 660 HOH HOH B . F 5 HOH 53 662 662 HOH HOH B . F 5 HOH 54 663 663 HOH HOH B . F 5 HOH 55 664 664 HOH HOH B . F 5 HOH 56 668 668 HOH HOH B . F 5 HOH 57 673 673 HOH HOH B . F 5 HOH 58 676 676 HOH HOH B . F 5 HOH 59 679 679 HOH HOH B . F 5 HOH 60 681 681 HOH HOH B . F 5 HOH 61 686 686 HOH HOH B . F 5 HOH 62 689 689 HOH HOH B . F 5 HOH 63 690 690 HOH HOH B . F 5 HOH 64 691 691 HOH HOH B . F 5 HOH 65 692 692 HOH HOH B . F 5 HOH 66 695 695 HOH HOH B . F 5 HOH 67 696 696 HOH HOH B . F 5 HOH 68 708 708 HOH HOH B . F 5 HOH 69 715 715 HOH HOH B . F 5 HOH 70 720 720 HOH HOH B . F 5 HOH 71 722 722 HOH HOH B . F 5 HOH 72 728 728 HOH HOH B . F 5 HOH 73 735 735 HOH HOH B . F 5 HOH 74 740 740 HOH HOH B . F 5 HOH 75 751 751 HOH HOH B . F 5 HOH 76 754 754 HOH HOH B . F 5 HOH 77 763 763 HOH HOH B . #