data_3KMP # _entry.id 3KMP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KMP pdb_00003kmp 10.2210/pdb3kmp/pdb NDB NA0355 ? ? RCSB RCSB056183 ? ? WWPDB D_1000056183 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-12-11 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ncs_dom_lim 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.pdbx_dist_value' 15 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 16 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 30 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 31 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 32 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 33 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 34 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 35 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 36 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 37 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3KMP _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-11-11 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Baburajendran, N.' 1 'Palasingam, P.' 2 'Narasimhan, K.' 3 'Jauch, R.' 4 'Kolatkar, P.R.' 5 # _citation.id primary _citation.title 'Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-beta effectors.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 38 _citation.page_first 3477 _citation.page_last 3488 _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20147459 _citation.pdbx_database_id_DOI 10.1093/nar/gkq046 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'BabuRajendran, N.' 1 ? primary 'Palasingam, P.' 2 ? primary 'Narasimhan, K.' 3 ? primary 'Sun, W.' 4 ? primary 'Prabhakar, S.' 5 ? primary 'Jauch, R.' 6 ? primary 'Kolatkar, P.R.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SMAD1-MH1 14368.723 2 ? ? 'UNP RESIDUES 9-132' ? 2 polymer syn "5'-D(P*AP*TP*CP*AP*GP*TP*CP*TP*AP*GP*AP*CP*AP*TP*A)-3'" 4577.011 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*AP*TP*GP*TP*CP*TP*AP*GP*AP*CP*TP*GP*A)-3'" 4624.021 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 6 water nat water 18.015 9 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;FTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIY CRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVES ; ;FTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIY CRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVES ; A,B ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DC)(DA)(DG)(DT)(DC)(DT)(DA)(DG)(DA)(DC)(DA)(DT)(DA)' ATCAGTCTAGACATA C ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DA)(DT)(DG)(DT)(DC)(DT)(DA)(DG)(DA)(DC)(DT)(DG)(DA)' GTATGTCTAGACTGA D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 THR n 1 3 SER n 1 4 PRO n 1 5 ALA n 1 6 VAL n 1 7 LYS n 1 8 ARG n 1 9 LEU n 1 10 LEU n 1 11 GLY n 1 12 TRP n 1 13 LYS n 1 14 GLN n 1 15 GLY n 1 16 ASP n 1 17 GLU n 1 18 GLU n 1 19 GLU n 1 20 LYS n 1 21 TRP n 1 22 ALA n 1 23 GLU n 1 24 LYS n 1 25 ALA n 1 26 VAL n 1 27 ASP n 1 28 ALA n 1 29 LEU n 1 30 VAL n 1 31 LYS n 1 32 LYS n 1 33 LEU n 1 34 LYS n 1 35 LYS n 1 36 LYS n 1 37 LYS n 1 38 GLY n 1 39 ALA n 1 40 MET n 1 41 GLU n 1 42 GLU n 1 43 LEU n 1 44 GLU n 1 45 LYS n 1 46 ALA n 1 47 LEU n 1 48 SER n 1 49 CYS n 1 50 PRO n 1 51 GLY n 1 52 GLN n 1 53 PRO n 1 54 SER n 1 55 ASN n 1 56 CYS n 1 57 VAL n 1 58 THR n 1 59 ILE n 1 60 PRO n 1 61 ARG n 1 62 SER n 1 63 LEU n 1 64 ASP n 1 65 GLY n 1 66 ARG n 1 67 LEU n 1 68 GLN n 1 69 VAL n 1 70 SER n 1 71 HIS n 1 72 ARG n 1 73 LYS n 1 74 GLY n 1 75 LEU n 1 76 PRO n 1 77 HIS n 1 78 VAL n 1 79 ILE n 1 80 TYR n 1 81 CYS n 1 82 ARG n 1 83 VAL n 1 84 TRP n 1 85 ARG n 1 86 TRP n 1 87 PRO n 1 88 ASP n 1 89 LEU n 1 90 GLN n 1 91 SER n 1 92 HIS n 1 93 HIS n 1 94 GLU n 1 95 LEU n 1 96 LYS n 1 97 PRO n 1 98 LEU n 1 99 GLU n 1 100 CYS n 1 101 CYS n 1 102 GLU n 1 103 PHE n 1 104 PRO n 1 105 PHE n 1 106 GLY n 1 107 SER n 1 108 LYS n 1 109 GLN n 1 110 LYS n 1 111 GLU n 1 112 VAL n 1 113 CYS n 1 114 ILE n 1 115 ASN n 1 116 PRO n 1 117 TYR n 1 118 HIS n 1 119 TYR n 1 120 LYS n 1 121 ARG n 1 122 VAL n 1 123 GLU n 1 124 SER n 2 1 DA n 2 2 DT n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DT n 2 9 DA n 2 10 DG n 2 11 DA n 2 12 DC n 2 13 DA n 2 14 DT n 2 15 DA n 3 1 DG n 3 2 DT n 3 3 DA n 3 4 DT n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DA n 3 12 DC n 3 13 DT n 3 14 DG n 3 15 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Smad1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETG60A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 9 9 PHE PHE A . n A 1 2 THR 2 10 10 THR THR A . n A 1 3 SER 3 11 11 SER SER A . n A 1 4 PRO 4 12 12 PRO PRO A . n A 1 5 ALA 5 13 13 ALA ALA A . n A 1 6 VAL 6 14 14 VAL VAL A . n A 1 7 LYS 7 15 15 LYS LYS A . n A 1 8 ARG 8 16 16 ARG ARG A . n A 1 9 LEU 9 17 17 LEU LEU A . n A 1 10 LEU 10 18 18 LEU LEU A . n A 1 11 GLY 11 19 19 GLY GLY A . n A 1 12 TRP 12 20 20 TRP TRP A . n A 1 13 LYS 13 21 21 LYS LYS A . n A 1 14 GLN 14 22 22 GLN GLN A . n A 1 15 GLY 15 23 23 GLY GLY A . n A 1 16 ASP 16 24 24 ASP ASP A . n A 1 17 GLU 17 25 25 GLU GLU A . n A 1 18 GLU 18 26 26 GLU GLU A . n A 1 19 GLU 19 27 27 GLU GLU A . n A 1 20 LYS 20 28 28 LYS LYS A . n A 1 21 TRP 21 29 29 TRP TRP A . n A 1 22 ALA 22 30 30 ALA ALA A . n A 1 23 GLU 23 31 31 GLU GLU A . n A 1 24 LYS 24 32 32 LYS LYS A . n A 1 25 ALA 25 33 33 ALA ALA A . n A 1 26 VAL 26 34 34 VAL VAL A . n A 1 27 ASP 27 35 35 ASP ASP A . n A 1 28 ALA 28 36 36 ALA ALA A . n A 1 29 LEU 29 37 37 LEU LEU A . n A 1 30 VAL 30 38 38 VAL VAL A . n A 1 31 LYS 31 39 39 LYS LYS A . n A 1 32 LYS 32 40 40 LYS LYS A . n A 1 33 LEU 33 41 41 LEU LEU A . n A 1 34 LYS 34 42 42 LYS LYS A . n A 1 35 LYS 35 43 43 LYS LYS A . n A 1 36 LYS 36 44 44 LYS LYS A . n A 1 37 LYS 37 45 45 LYS LYS A . n A 1 38 GLY 38 46 46 GLY GLY A . n A 1 39 ALA 39 47 47 ALA ALA A . n A 1 40 MET 40 48 48 MET MET A . n A 1 41 GLU 41 49 49 GLU GLU A . n A 1 42 GLU 42 50 50 GLU GLU A . n A 1 43 LEU 43 51 51 LEU LEU A . n A 1 44 GLU 44 52 52 GLU GLU A . n A 1 45 LYS 45 53 53 LYS LYS A . n A 1 46 ALA 46 54 54 ALA ALA A . n A 1 47 LEU 47 55 55 LEU LEU A . n A 1 48 SER 48 56 56 SER SER A . n A 1 49 CYS 49 57 57 CYS CYS A . n A 1 50 PRO 50 58 58 PRO PRO A . n A 1 51 GLY 51 59 59 GLY GLY A . n A 1 52 GLN 52 60 60 GLN GLN A . n A 1 53 PRO 53 61 61 PRO PRO A . n A 1 54 SER 54 62 62 SER SER A . n A 1 55 ASN 55 63 63 ASN ASN A . n A 1 56 CYS 56 64 64 CYS CYS A . n A 1 57 VAL 57 65 65 VAL VAL A . n A 1 58 THR 58 66 66 THR THR A . n A 1 59 ILE 59 67 67 ILE ILE A . n A 1 60 PRO 60 68 68 PRO PRO A . n A 1 61 ARG 61 69 69 ARG ARG A . n A 1 62 SER 62 70 70 SER SER A . n A 1 63 LEU 63 71 71 LEU LEU A . n A 1 64 ASP 64 72 72 ASP ASP A . n A 1 65 GLY 65 73 73 GLY GLY A . n A 1 66 ARG 66 74 74 ARG ARG A . n A 1 67 LEU 67 75 75 LEU LEU A . n A 1 68 GLN 68 76 76 GLN GLN A . n A 1 69 VAL 69 77 77 VAL VAL A . n A 1 70 SER 70 78 78 SER SER A . n A 1 71 HIS 71 79 79 HIS HIS A . n A 1 72 ARG 72 80 80 ARG ARG A . n A 1 73 LYS 73 81 81 LYS LYS A . n A 1 74 GLY 74 82 82 GLY GLY A . n A 1 75 LEU 75 83 83 LEU LEU A . n A 1 76 PRO 76 84 84 PRO PRO A . n A 1 77 HIS 77 85 85 HIS HIS A . n A 1 78 VAL 78 86 86 VAL VAL A . n A 1 79 ILE 79 87 87 ILE ILE A . n A 1 80 TYR 80 88 88 TYR TYR A . n A 1 81 CYS 81 89 89 CYS CYS A . n A 1 82 ARG 82 90 90 ARG ARG A . n A 1 83 VAL 83 91 91 VAL VAL A . n A 1 84 TRP 84 92 92 TRP TRP A . n A 1 85 ARG 85 93 93 ARG ARG A . n A 1 86 TRP 86 94 94 TRP TRP A . n A 1 87 PRO 87 95 95 PRO PRO A . n A 1 88 ASP 88 96 96 ASP ASP A . n A 1 89 LEU 89 97 97 LEU LEU A . n A 1 90 GLN 90 98 98 GLN GLN A . n A 1 91 SER 91 99 99 SER SER A . n A 1 92 HIS 92 100 100 HIS HIS A . n A 1 93 HIS 93 101 101 HIS HIS A . n A 1 94 GLU 94 102 102 GLU GLU A . n A 1 95 LEU 95 103 103 LEU LEU A . n A 1 96 LYS 96 104 104 LYS LYS A . n A 1 97 PRO 97 105 105 PRO PRO A . n A 1 98 LEU 98 106 106 LEU LEU A . n A 1 99 GLU 99 107 107 GLU GLU A . n A 1 100 CYS 100 108 108 CYS CYS A . n A 1 101 CYS 101 109 109 CYS CYS A . n A 1 102 GLU 102 110 110 GLU GLU A . n A 1 103 PHE 103 111 111 PHE PHE A . n A 1 104 PRO 104 112 112 PRO PRO A . n A 1 105 PHE 105 113 113 PHE PHE A . n A 1 106 GLY 106 114 114 GLY GLY A . n A 1 107 SER 107 115 115 SER SER A . n A 1 108 LYS 108 116 116 LYS LYS A . n A 1 109 GLN 109 117 117 GLN GLN A . n A 1 110 LYS 110 118 118 LYS LYS A . n A 1 111 GLU 111 119 119 GLU GLU A . n A 1 112 VAL 112 120 120 VAL VAL A . n A 1 113 CYS 113 121 121 CYS CYS A . n A 1 114 ILE 114 122 122 ILE ILE A . n A 1 115 ASN 115 123 123 ASN ASN A . n A 1 116 PRO 116 124 124 PRO PRO A . n A 1 117 TYR 117 125 125 TYR TYR A . n A 1 118 HIS 118 126 126 HIS HIS A . n A 1 119 TYR 119 127 127 TYR TYR A . n A 1 120 LYS 120 128 128 LYS LYS A . n A 1 121 ARG 121 129 129 ARG ARG A . n A 1 122 VAL 122 130 130 VAL VAL A . n A 1 123 GLU 123 131 131 GLU GLU A . n A 1 124 SER 124 132 132 SER SER A . n B 1 1 PHE 1 9 ? ? ? B . n B 1 2 THR 2 10 10 THR THR B . n B 1 3 SER 3 11 11 SER SER B . n B 1 4 PRO 4 12 12 PRO PRO B . n B 1 5 ALA 5 13 13 ALA ALA B . n B 1 6 VAL 6 14 14 VAL VAL B . n B 1 7 LYS 7 15 15 LYS LYS B . n B 1 8 ARG 8 16 16 ARG ARG B . n B 1 9 LEU 9 17 17 LEU LEU B . n B 1 10 LEU 10 18 18 LEU LEU B . n B 1 11 GLY 11 19 19 GLY GLY B . n B 1 12 TRP 12 20 20 TRP TRP B . n B 1 13 LYS 13 21 21 LYS LYS B . n B 1 14 GLN 14 22 22 GLN GLN B . n B 1 15 GLY 15 23 23 GLY GLY B . n B 1 16 ASP 16 24 24 ASP ASP B . n B 1 17 GLU 17 25 25 GLU GLU B . n B 1 18 GLU 18 26 26 GLU GLU B . n B 1 19 GLU 19 27 27 GLU GLU B . n B 1 20 LYS 20 28 28 LYS LYS B . n B 1 21 TRP 21 29 29 TRP TRP B . n B 1 22 ALA 22 30 30 ALA ALA B . n B 1 23 GLU 23 31 31 GLU GLU B . n B 1 24 LYS 24 32 32 LYS LYS B . n B 1 25 ALA 25 33 33 ALA ALA B . n B 1 26 VAL 26 34 34 VAL VAL B . n B 1 27 ASP 27 35 35 ASP ASP B . n B 1 28 ALA 28 36 36 ALA ALA B . n B 1 29 LEU 29 37 37 LEU LEU B . n B 1 30 VAL 30 38 38 VAL VAL B . n B 1 31 LYS 31 39 39 LYS LYS B . n B 1 32 LYS 32 40 40 LYS LYS B . n B 1 33 LEU 33 41 41 LEU LEU B . n B 1 34 LYS 34 42 42 LYS LYS B . n B 1 35 LYS 35 43 43 LYS LYS B . n B 1 36 LYS 36 44 44 LYS LYS B . n B 1 37 LYS 37 45 45 LYS LYS B . n B 1 38 GLY 38 46 46 GLY GLY B . n B 1 39 ALA 39 47 47 ALA ALA B . n B 1 40 MET 40 48 48 MET MET B . n B 1 41 GLU 41 49 49 GLU GLU B . n B 1 42 GLU 42 50 50 GLU GLU B . n B 1 43 LEU 43 51 51 LEU LEU B . n B 1 44 GLU 44 52 52 GLU GLU B . n B 1 45 LYS 45 53 53 LYS LYS B . n B 1 46 ALA 46 54 54 ALA ALA B . n B 1 47 LEU 47 55 55 LEU LEU B . n B 1 48 SER 48 56 56 SER SER B . n B 1 49 CYS 49 57 57 CYS CYS B . n B 1 50 PRO 50 58 58 PRO PRO B . n B 1 51 GLY 51 59 59 GLY GLY B . n B 1 52 GLN 52 60 60 GLN GLN B . n B 1 53 PRO 53 61 61 PRO PRO B . n B 1 54 SER 54 62 62 SER SER B . n B 1 55 ASN 55 63 63 ASN ASN B . n B 1 56 CYS 56 64 64 CYS CYS B . n B 1 57 VAL 57 65 65 VAL VAL B . n B 1 58 THR 58 66 66 THR THR B . n B 1 59 ILE 59 67 67 ILE ILE B . n B 1 60 PRO 60 68 68 PRO PRO B . n B 1 61 ARG 61 69 69 ARG ARG B . n B 1 62 SER 62 70 70 SER SER B . n B 1 63 LEU 63 71 71 LEU LEU B . n B 1 64 ASP 64 72 72 ASP ASP B . n B 1 65 GLY 65 73 73 GLY GLY B . n B 1 66 ARG 66 74 74 ARG ARG B . n B 1 67 LEU 67 75 75 LEU LEU B . n B 1 68 GLN 68 76 76 GLN GLN B . n B 1 69 VAL 69 77 77 VAL VAL B . n B 1 70 SER 70 78 78 SER SER B . n B 1 71 HIS 71 79 79 HIS HIS B . n B 1 72 ARG 72 80 80 ARG ARG B . n B 1 73 LYS 73 81 81 LYS LYS B . n B 1 74 GLY 74 82 82 GLY GLY B . n B 1 75 LEU 75 83 83 LEU LEU B . n B 1 76 PRO 76 84 84 PRO PRO B . n B 1 77 HIS 77 85 85 HIS HIS B . n B 1 78 VAL 78 86 86 VAL VAL B . n B 1 79 ILE 79 87 87 ILE ILE B . n B 1 80 TYR 80 88 88 TYR TYR B . n B 1 81 CYS 81 89 89 CYS CYS B . n B 1 82 ARG 82 90 90 ARG ARG B . n B 1 83 VAL 83 91 91 VAL VAL B . n B 1 84 TRP 84 92 92 TRP TRP B . n B 1 85 ARG 85 93 93 ARG ARG B . n B 1 86 TRP 86 94 94 TRP TRP B . n B 1 87 PRO 87 95 95 PRO PRO B . n B 1 88 ASP 88 96 96 ASP ASP B . n B 1 89 LEU 89 97 97 LEU LEU B . n B 1 90 GLN 90 98 98 GLN GLN B . n B 1 91 SER 91 99 99 SER SER B . n B 1 92 HIS 92 100 100 HIS HIS B . n B 1 93 HIS 93 101 101 HIS HIS B . n B 1 94 GLU 94 102 102 GLU GLU B . n B 1 95 LEU 95 103 103 LEU LEU B . n B 1 96 LYS 96 104 104 LYS LYS B . n B 1 97 PRO 97 105 105 PRO PRO B . n B 1 98 LEU 98 106 106 LEU LEU B . n B 1 99 GLU 99 107 107 GLU GLU B . n B 1 100 CYS 100 108 108 CYS CYS B . n B 1 101 CYS 101 109 109 CYS CYS B . n B 1 102 GLU 102 110 110 GLU GLU B . n B 1 103 PHE 103 111 111 PHE PHE B . n B 1 104 PRO 104 112 112 PRO PRO B . n B 1 105 PHE 105 113 113 PHE PHE B . n B 1 106 GLY 106 114 114 GLY GLY B . n B 1 107 SER 107 115 115 SER SER B . n B 1 108 LYS 108 116 116 LYS LYS B . n B 1 109 GLN 109 117 117 GLN GLN B . n B 1 110 LYS 110 118 118 LYS LYS B . n B 1 111 GLU 111 119 119 GLU GLU B . n B 1 112 VAL 112 120 120 VAL VAL B . n B 1 113 CYS 113 121 121 CYS CYS B . n B 1 114 ILE 114 122 122 ILE ILE B . n B 1 115 ASN 115 123 123 ASN ASN B . n B 1 116 PRO 116 124 124 PRO PRO B . n B 1 117 TYR 117 125 125 TYR TYR B . n B 1 118 HIS 118 126 126 HIS HIS B . n B 1 119 TYR 119 127 127 TYR TYR B . n B 1 120 LYS 120 128 128 LYS LYS B . n B 1 121 ARG 121 129 129 ARG ARG B . n B 1 122 VAL 122 130 130 VAL VAL B . n B 1 123 GLU 123 131 131 GLU GLU B . n B 1 124 SER 124 132 132 SER SER B . n C 2 1 DA 1 1 1 DA DA C . n C 2 2 DT 2 2 2 DT DT C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DA 11 11 11 DA DA C . n C 2 12 DC 12 12 12 DC DC C . n C 2 13 DA 13 13 13 DA DA C . n C 2 14 DT 14 14 14 DT DT C . n C 2 15 DA 15 15 15 DA DA C . n D 3 1 DG 1 2 2 DG DG D . n D 3 2 DT 2 3 3 DT DT D . n D 3 3 DA 3 4 4 DA DA D . n D 3 4 DT 4 5 5 DT DT D . n D 3 5 DG 5 6 6 DG DG D . n D 3 6 DT 6 7 7 DT DT D . n D 3 7 DC 7 8 8 DC DC D . n D 3 8 DT 8 9 9 DT DT D . n D 3 9 DA 9 10 10 DA DA D . n D 3 10 DG 10 11 11 DG DG D . n D 3 11 DA 11 12 12 DA DA D . n D 3 12 DC 12 13 13 DC DC D . n D 3 13 DT 13 14 14 DT DT D . n D 3 14 DG 14 15 15 DG DG D . n D 3 15 DA 15 16 16 DA DA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 2 2 ZN ZN A . F 5 GOL 1 133 2 GOL GOL A . G 4 ZN 1 1 1 ZN ZN B . H 5 GOL 1 133 1 GOL GOL B . I 6 HOH 1 1 1 HOH HOH A . I 6 HOH 2 6 6 HOH HOH A . I 6 HOH 3 7 7 HOH HOH A . J 6 HOH 1 4 4 HOH HOH B . J 6 HOH 2 8 8 HOH HOH B . K 6 HOH 1 16 3 HOH HOH C . L 6 HOH 1 17 2 HOH HOH D . L 6 HOH 2 18 5 HOH HOH D . L 6 HOH 3 19 9 HOH HOH D . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.length_a 73.938 _cell.length_b 77.490 _cell.length_c 83.780 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3KMP _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3KMP _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3KMP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 61.11 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details ;0.2M Ammonium tartrate dibasic, 20% PEG 3350, 10% glycerol, 3% 2-propanol (additive), vapor diffusion, hanging drop, temperature 291K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-11-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 # _reflns.entry_id 3KMP _reflns.B_iso_Wilson_estimate 56.330 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 30.0 _reflns.number_all 13667 _reflns.number_obs 13623 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3KMP _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 23.413 _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.350 _refine.ls_number_reflns_obs 13623 _refine.ls_number_reflns_all 13667 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.208 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_R_work 0.206 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.250 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.010 _refine.ls_number_reflns_R_free 683 _refine.ls_number_reflns_R_work 12940 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 64.761 _refine.solvent_model_param_bsol 46.245 _refine.solvent_model_param_ksol 0.322 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 7.724 _refine.aniso_B[2][2] -4.539 _refine.aniso_B[3][3] -3.185 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.480 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 285.28 _refine.B_iso_min 20.74 _refine.occupancy_max 1.00 _refine.occupancy_min 0.46 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 26.200 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2003 _refine_hist.pdbx_number_atoms_nucleic_acid 617 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 2643 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 23.413 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2781 0.009 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3876 1.355 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 407 0.085 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 388 0.006 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1103 20.658 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 POSITIONAL A 164 0.049 ? 1 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 1 2 POSITIONAL B 164 0.049 ? 2 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 POSITIONAL A 630 0.041 ? 3 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 POSITIONAL B 630 0.041 ? 4 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 POSITIONAL A 181 0.042 ? 5 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 2 POSITIONAL B 181 0.042 ? 6 ? ? ? ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.700 2.908 5 100.000 2537 . 0.275 0.393 . 138 . 2675 . . 'X-RAY DIFFRACTION' 2.908 3.200 5 100.000 2576 . 0.245 0.308 . 137 . 2713 . . 'X-RAY DIFFRACTION' 3.200 3.662 5 100.000 2542 . 0.225 0.306 . 156 . 2698 . . 'X-RAY DIFFRACTION' 3.662 4.608 5 99.000 2609 . 0.184 0.207 . 121 . 2730 . . 'X-RAY DIFFRACTION' 4.608 23.414 5 98.000 2676 . 0.165 0.186 . 131 . 2807 . . 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 A 2 2 B 3 1 A 3 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A SER 3 . A ALA 22 . A SER 11 A ALA 30 ? 'chain A resid 11:30' 1 2 1 B SER 3 . B ALA 22 . B SER 11 B ALA 30 ? 'chain B and resid 11:30' 2 1 1 A LYS 24 . A CYS 101 . A LYS 32 A CYS 109 ? 'chain A resid 32:109' 2 2 1 B LYS 24 . B CYS 101 . B LYS 32 B CYS 109 ? 'chain B and resid 32:109' 3 1 1 A PHE 103 . A GLU 123 . A PHE 111 A GLU 131 ? 'chain A resid 111:131' 3 2 1 B PHE 103 . B GLU 123 . B PHE 111 B GLU 131 ? 'chain B and resid 111:131' # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 3KMP _struct.title 'Crystal Structure of SMAD1-MH1/DNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KMP _struct_keywords.text ;protein-DNA complex, Smad1, SBE DNA, MH1 domain, beta hairpin, Nucleus, Transcription, Transcription regulation, TRANSCRIPTION REGULATOR-DNA complex ; _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8CC31_MOUSE Q8CC31 1 ;FTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIY CRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVES ; 9 ? 2 PDB 3KMP 3KMP 2 ? ? ? 3 PDB 3KMP 3KMP 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KMP A 1 ? 124 ? Q8CC31 9 ? 132 ? 9 132 2 1 3KMP B 1 ? 124 ? Q8CC31 9 ? 132 ? 9 132 3 2 3KMP C 1 ? 15 ? 3KMP 1 ? 15 ? 1 15 4 3 3KMP D 1 ? 15 ? 3KMP 2 ? 16 ? 2 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3360 ? 1 MORE -23 ? 1 'SSA (A^2)' 20220 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? TRP A 12 ? SER A 11 TRP A 20 1 ? 10 HELX_P HELX_P2 2 ASP A 16 ? LYS A 34 ? ASP A 24 LYS A 42 1 ? 19 HELX_P HELX_P3 3 GLY A 38 ? CYS A 49 ? GLY A 46 CYS A 57 1 ? 12 HELX_P HELX_P4 4 LEU A 75 ? ARG A 85 ? LEU A 83 ARG A 93 1 ? 11 HELX_P HELX_P5 5 SER A 91 ? HIS A 93 ? SER A 99 HIS A 101 5 ? 3 HELX_P HELX_P6 6 PRO A 104 ? LYS A 108 ? PRO A 112 LYS A 116 5 ? 5 HELX_P HELX_P7 7 ASN A 115 ? TYR A 117 ? ASN A 123 TYR A 125 5 ? 3 HELX_P HELX_P8 8 SER B 3 ? TRP B 12 ? SER B 11 TRP B 20 1 ? 10 HELX_P HELX_P9 9 ASP B 16 ? LYS B 34 ? ASP B 24 LYS B 42 1 ? 19 HELX_P HELX_P10 10 GLY B 38 ? CYS B 49 ? GLY B 46 CYS B 57 1 ? 12 HELX_P HELX_P11 11 LEU B 75 ? ARG B 85 ? LEU B 83 ARG B 93 1 ? 11 HELX_P HELX_P12 12 SER B 91 ? HIS B 93 ? SER B 99 HIS B 101 5 ? 3 HELX_P HELX_P13 13 PRO B 104 ? LYS B 108 ? PRO B 112 LYS B 116 5 ? 5 HELX_P HELX_P14 14 ASN B 115 ? TYR B 117 ? ASN B 123 TYR B 125 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E ZN . ZN ? ? ? 1_555 A CYS 56 SG ? ? A ZN 2 A CYS 64 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc2 metalc ? ? E ZN . ZN ? ? ? 1_555 A CYS 101 SG ? ? A ZN 2 A CYS 109 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc3 metalc ? ? E ZN . ZN ? ? ? 1_555 A CYS 113 SG ? ? A ZN 2 A CYS 121 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 A HIS 118 ND1 ? ? A ZN 2 A HIS 126 1_555 ? ? ? ? ? ? ? 2.019 ? ? metalc5 metalc ? ? G ZN . ZN ? ? ? 1_555 B CYS 56 SG ? ? B ZN 1 B CYS 64 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc6 metalc ? ? G ZN . ZN ? ? ? 1_555 B CYS 101 SG ? ? B ZN 1 B CYS 109 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc7 metalc ? ? G ZN . ZN ? ? ? 1_555 B CYS 113 SG ? ? B ZN 1 B CYS 121 1_555 ? ? ? ? ? ? ? 2.419 ? ? metalc8 metalc ? ? G ZN . ZN ? ? ? 1_555 B HIS 118 ND1 ? ? B ZN 1 B HIS 126 1_555 ? ? ? ? ? ? ? 2.027 ? ? hydrog1 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 2 D DA 16 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog2 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 14 N1 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 14 O6 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 14 N2 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 4 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 4 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 5 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 5 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 5 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? C DT 6 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? C DT 6 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 8 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 8 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 9 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 9 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 11 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 11 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 12 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 12 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 12 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 13 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 13 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 14 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 14 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 15 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 15 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 56 ? A CYS 64 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 SG ? A CYS 101 ? A CYS 109 ? 1_555 105.2 ? 2 SG ? A CYS 56 ? A CYS 64 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 SG ? A CYS 113 ? A CYS 121 ? 1_555 111.2 ? 3 SG ? A CYS 101 ? A CYS 109 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 SG ? A CYS 113 ? A CYS 121 ? 1_555 108.7 ? 4 SG ? A CYS 56 ? A CYS 64 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 ND1 ? A HIS 118 ? A HIS 126 ? 1_555 110.3 ? 5 SG ? A CYS 101 ? A CYS 109 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 ND1 ? A HIS 118 ? A HIS 126 ? 1_555 112.6 ? 6 SG ? A CYS 113 ? A CYS 121 ? 1_555 ZN ? E ZN . ? A ZN 2 ? 1_555 ND1 ? A HIS 118 ? A HIS 126 ? 1_555 108.7 ? 7 SG ? B CYS 56 ? B CYS 64 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? B CYS 101 ? B CYS 109 ? 1_555 106.4 ? 8 SG ? B CYS 56 ? B CYS 64 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? B CYS 113 ? B CYS 121 ? 1_555 116.0 ? 9 SG ? B CYS 101 ? B CYS 109 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 SG ? B CYS 113 ? B CYS 121 ? 1_555 108.0 ? 10 SG ? B CYS 56 ? B CYS 64 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 ND1 ? B HIS 118 ? B HIS 126 ? 1_555 103.1 ? 11 SG ? B CYS 101 ? B CYS 109 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 ND1 ? B HIS 118 ? B HIS 126 ? 1_555 114.3 ? 12 SG ? B CYS 113 ? B CYS 121 ? 1_555 ZN ? G ZN . ? B ZN 1 ? 1_555 ND1 ? B HIS 118 ? B HIS 126 ? 1_555 109.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 2 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 58 ? PRO A 60 ? THR A 66 PRO A 68 A 2 GLU A 111 ? CYS A 113 ? GLU A 119 CYS A 121 B 1 LEU A 67 ? VAL A 69 ? LEU A 75 VAL A 77 B 2 ARG A 72 ? GLY A 74 ? ARG A 80 GLY A 82 C 1 LEU A 95 ? PRO A 97 ? LEU A 103 PRO A 105 C 2 TYR A 119 ? ARG A 121 ? TYR A 127 ARG A 129 D 1 THR B 58 ? PRO B 60 ? THR B 66 PRO B 68 D 2 GLU B 111 ? CYS B 113 ? GLU B 119 CYS B 121 E 1 LEU B 67 ? VAL B 69 ? LEU B 75 VAL B 77 E 2 ARG B 72 ? GLY B 74 ? ARG B 80 GLY B 82 F 1 LEU B 95 ? PRO B 97 ? LEU B 103 PRO B 105 F 2 TYR B 119 ? ARG B 121 ? TYR B 127 ARG B 129 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 59 ? N ILE A 67 O VAL A 112 ? O VAL A 120 B 1 2 N LEU A 67 ? N LEU A 75 O GLY A 74 ? O GLY A 82 C 1 2 N LYS A 96 ? N LYS A 104 O LYS A 120 ? O LYS A 128 D 1 2 N ILE B 59 ? N ILE B 67 O VAL B 112 ? O VAL B 120 E 1 2 N LEU B 67 ? N LEU B 75 O GLY B 74 ? O GLY B 82 F 1 2 N LYS B 96 ? N LYS B 104 O LYS B 120 ? O LYS B 128 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 2 ? 4 'BINDING SITE FOR RESIDUE ZN A 2' AC2 Software A GOL 133 ? 3 'BINDING SITE FOR RESIDUE GOL A 133' AC3 Software B ZN 1 ? 4 'BINDING SITE FOR RESIDUE ZN B 1' AC4 Software B GOL 133 ? 4 'BINDING SITE FOR RESIDUE GOL B 133' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 56 ? CYS A 64 . ? 1_555 ? 2 AC1 4 CYS A 101 ? CYS A 109 . ? 1_555 ? 3 AC1 4 CYS A 113 ? CYS A 121 . ? 1_555 ? 4 AC1 4 HIS A 118 ? HIS A 126 . ? 1_555 ? 5 AC2 3 TRP A 21 ? TRP A 29 . ? 1_555 ? 6 AC2 3 SER A 70 ? SER A 78 . ? 1_555 ? 7 AC2 3 HIS A 71 ? HIS A 79 . ? 1_555 ? 8 AC3 4 CYS B 56 ? CYS B 64 . ? 1_555 ? 9 AC3 4 CYS B 101 ? CYS B 109 . ? 1_555 ? 10 AC3 4 CYS B 113 ? CYS B 121 . ? 1_555 ? 11 AC3 4 HIS B 118 ? HIS B 126 . ? 1_555 ? 12 AC4 4 LYS B 24 ? LYS B 32 . ? 1_555 ? 13 AC4 4 SER B 70 ? SER B 78 . ? 1_555 ? 14 AC4 4 HIS B 71 ? HIS B 79 . ? 1_555 ? 15 AC4 4 ARG B 72 ? ARG B 80 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N3 C DT 2 ? ? C4 C DT 2 ? ? O4 C DT 2 ? ? 123.50 119.90 3.60 0.60 N 2 1 "O4'" C DA 9 ? ? "C1'" C DA 9 ? ? N9 C DA 9 ? ? 101.16 108.00 -6.84 0.70 N 3 1 "O4'" C DC 12 ? ? "C1'" C DC 12 ? ? N1 C DC 12 ? ? 111.48 108.30 3.18 0.30 N 4 1 "C3'" C DA 13 ? ? "C2'" C DA 13 ? ? "C1'" C DA 13 ? ? 97.31 102.40 -5.09 0.80 N 5 1 "O4'" C DA 13 ? ? "C1'" C DA 13 ? ? N9 C DA 13 ? ? 110.54 108.30 2.24 0.30 N 6 1 "C3'" C DT 14 ? ? "C2'" C DT 14 ? ? "C1'" C DT 14 ? ? 96.96 102.40 -5.44 0.80 N 7 1 "O4'" C DT 14 ? ? "C1'" C DT 14 ? ? N1 C DT 14 ? ? 110.37 108.30 2.07 0.30 N 8 1 "O4'" C DA 15 ? ? "C4'" C DA 15 ? ? "C3'" C DA 15 ? ? 99.10 104.50 -5.40 0.40 N 9 1 "C4'" C DA 15 ? ? "C3'" C DA 15 ? ? "C2'" C DA 15 ? ? 97.31 102.20 -4.89 0.70 N 10 1 "O4'" C DA 15 ? ? "C1'" C DA 15 ? ? N9 C DA 15 ? ? 111.79 108.30 3.49 0.30 N 11 1 "O4'" D DG 2 ? ? "C4'" D DG 2 ? ? "C3'" D DG 2 ? ? 101.14 104.50 -3.36 0.40 N 12 1 "C4'" D DT 3 ? ? "C3'" D DT 3 ? ? "C2'" D DT 3 ? ? 97.34 102.20 -4.86 0.70 N 13 1 "C3'" D DT 3 ? ? "C2'" D DT 3 ? ? "C1'" D DT 3 ? ? 97.29 102.40 -5.11 0.80 N 14 1 "O4'" D DT 3 ? ? "C1'" D DT 3 ? ? N1 D DT 3 ? ? 111.27 108.30 2.97 0.30 N 15 1 "O4'" D DA 4 ? ? "C1'" D DA 4 ? ? N9 D DA 4 ? ? 112.39 108.30 4.09 0.30 N 16 1 C5 D DT 7 ? ? C4 D DT 7 ? ? O4 D DT 7 ? ? 120.56 124.90 -4.34 0.70 N 17 1 "O4'" D DC 8 ? ? "C1'" D DC 8 ? ? N1 D DC 8 ? ? 102.37 108.00 -5.63 0.70 N 18 1 "C3'" D DT 9 ? ? "C2'" D DT 9 ? ? "C1'" D DT 9 ? ? 97.52 102.40 -4.88 0.80 N 19 1 "C3'" D DT 14 ? ? "C2'" D DT 14 ? ? "C1'" D DT 14 ? ? 96.07 102.40 -6.33 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 79 ? B 72.62 -5.96 2 1 ARG A 93 ? ? -140.02 -60.71 3 1 GLU A 131 ? ? -100.47 -164.42 4 1 HIS B 79 ? B 72.40 -3.43 5 1 ARG B 93 ? ? -140.99 -62.02 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -6.1101 -9.4663 -4.7637 0.4539 0.3584 0.2922 0.0023 0.0628 0.0562 2.5468 2.5250 0.2591 -1.1374 -1.5780 0.2173 -0.3086 0.1862 0.1309 -0.1348 -0.0606 0.2606 0.4948 0.2390 0.0707 'X-RAY DIFFRACTION' 2 ? refined -16.8914 31.8765 -17.0281 0.3022 0.2753 0.4423 0.0186 0.0586 -0.1059 2.6872 0.9739 2.0188 1.2968 -0.9009 -0.3162 0.0913 -0.0526 -0.0146 -0.3027 0.4957 0.4205 0.0001 -0.0204 0.0639 'X-RAY DIFFRACTION' 3 ? refined -13.8705 13.6852 -7.7842 0.2774 0.3503 0.2114 -0.0031 0.0866 -0.0716 4.2400 4.2150 1.3401 1.3346 2.4246 1.4121 -0.2174 0.3653 -0.0615 -0.3059 -0.3056 -0.2543 -0.4081 -0.6785 -0.2628 'X-RAY DIFFRACTION' 4 ? refined -15.0649 8.5770 -8.7586 0.1331 0.3736 0.3029 -0.0628 -0.0040 0.0597 2.1053 3.5094 3.7851 -0.3101 1.5145 1.5923 0.1797 0.1555 -0.4425 -0.4447 -0.5719 -0.4897 -0.0125 -0.4322 -0.0561 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 9 A 132 'CHAIN A' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 10 B 132 'CHAIN B' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 1 C 15 'CHAIN C' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 2 D 16 'CHAIN D' ? ? ? ? ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id PHE _pdbx_unobs_or_zero_occ_residues.auth_seq_id 9 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id PHE _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 GOL C1 C N N 280 GOL O1 O N N 281 GOL C2 C N N 282 GOL O2 O N N 283 GOL C3 C N N 284 GOL O3 O N N 285 GOL H11 H N N 286 GOL H12 H N N 287 GOL HO1 H N N 288 GOL H2 H N N 289 GOL HO2 H N N 290 GOL H31 H N N 291 GOL H32 H N N 292 GOL HO3 H N N 293 HIS N N N N 294 HIS CA C N S 295 HIS C C N N 296 HIS O O N N 297 HIS CB C N N 298 HIS CG C Y N 299 HIS ND1 N Y N 300 HIS CD2 C Y N 301 HIS CE1 C Y N 302 HIS NE2 N Y N 303 HIS OXT O N N 304 HIS H H N N 305 HIS H2 H N N 306 HIS HA H N N 307 HIS HB2 H N N 308 HIS HB3 H N N 309 HIS HD1 H N N 310 HIS HD2 H N N 311 HIS HE1 H N N 312 HIS HE2 H N N 313 HIS HXT H N N 314 HOH O O N N 315 HOH H1 H N N 316 HOH H2 H N N 317 ILE N N N N 318 ILE CA C N S 319 ILE C C N N 320 ILE O O N N 321 ILE CB C N S 322 ILE CG1 C N N 323 ILE CG2 C N N 324 ILE CD1 C N N 325 ILE OXT O N N 326 ILE H H N N 327 ILE H2 H N N 328 ILE HA H N N 329 ILE HB H N N 330 ILE HG12 H N N 331 ILE HG13 H N N 332 ILE HG21 H N N 333 ILE HG22 H N N 334 ILE HG23 H N N 335 ILE HD11 H N N 336 ILE HD12 H N N 337 ILE HD13 H N N 338 ILE HXT H N N 339 LEU N N N N 340 LEU CA C N S 341 LEU C C N N 342 LEU O O N N 343 LEU CB C N N 344 LEU CG C N N 345 LEU CD1 C N N 346 LEU CD2 C N N 347 LEU OXT O N N 348 LEU H H N N 349 LEU H2 H N N 350 LEU HA H N N 351 LEU HB2 H N N 352 LEU HB3 H N N 353 LEU HG H N N 354 LEU HD11 H N N 355 LEU HD12 H N N 356 LEU HD13 H N N 357 LEU HD21 H N N 358 LEU HD22 H N N 359 LEU HD23 H N N 360 LEU HXT H N N 361 LYS N N N N 362 LYS CA C N S 363 LYS C C N N 364 LYS O O N N 365 LYS CB C N N 366 LYS CG C N N 367 LYS CD C N N 368 LYS CE C N N 369 LYS NZ N N N 370 LYS OXT O N N 371 LYS H H N N 372 LYS H2 H N N 373 LYS HA H N N 374 LYS HB2 H N N 375 LYS HB3 H N N 376 LYS HG2 H N N 377 LYS HG3 H N N 378 LYS HD2 H N N 379 LYS HD3 H N N 380 LYS HE2 H N N 381 LYS HE3 H N N 382 LYS HZ1 H N N 383 LYS HZ2 H N N 384 LYS HZ3 H N N 385 LYS HXT H N N 386 MET N N N N 387 MET CA C N S 388 MET C C N N 389 MET O O N N 390 MET CB C N N 391 MET CG C N N 392 MET SD S N N 393 MET CE C N N 394 MET OXT O N N 395 MET H H N N 396 MET H2 H N N 397 MET HA H N N 398 MET HB2 H N N 399 MET HB3 H N N 400 MET HG2 H N N 401 MET HG3 H N N 402 MET HE1 H N N 403 MET HE2 H N N 404 MET HE3 H N N 405 MET HXT H N N 406 PHE N N N N 407 PHE CA C N S 408 PHE C C N N 409 PHE O O N N 410 PHE CB C N N 411 PHE CG C Y N 412 PHE CD1 C Y N 413 PHE CD2 C Y N 414 PHE CE1 C Y N 415 PHE CE2 C Y N 416 PHE CZ C Y N 417 PHE OXT O N N 418 PHE H H N N 419 PHE H2 H N N 420 PHE HA H N N 421 PHE HB2 H N N 422 PHE HB3 H N N 423 PHE HD1 H N N 424 PHE HD2 H N N 425 PHE HE1 H N N 426 PHE HE2 H N N 427 PHE HZ H N N 428 PHE HXT H N N 429 PRO N N N N 430 PRO CA C N S 431 PRO C C N N 432 PRO O O N N 433 PRO CB C N N 434 PRO CG C N N 435 PRO CD C N N 436 PRO OXT O N N 437 PRO H H N N 438 PRO HA H N N 439 PRO HB2 H N N 440 PRO HB3 H N N 441 PRO HG2 H N N 442 PRO HG3 H N N 443 PRO HD2 H N N 444 PRO HD3 H N N 445 PRO HXT H N N 446 SER N N N N 447 SER CA C N S 448 SER C C N N 449 SER O O N N 450 SER CB C N N 451 SER OG O N N 452 SER OXT O N N 453 SER H H N N 454 SER H2 H N N 455 SER HA H N N 456 SER HB2 H N N 457 SER HB3 H N N 458 SER HG H N N 459 SER HXT H N N 460 THR N N N N 461 THR CA C N S 462 THR C C N N 463 THR O O N N 464 THR CB C N R 465 THR OG1 O N N 466 THR CG2 C N N 467 THR OXT O N N 468 THR H H N N 469 THR H2 H N N 470 THR HA H N N 471 THR HB H N N 472 THR HG1 H N N 473 THR HG21 H N N 474 THR HG22 H N N 475 THR HG23 H N N 476 THR HXT H N N 477 TRP N N N N 478 TRP CA C N S 479 TRP C C N N 480 TRP O O N N 481 TRP CB C N N 482 TRP CG C Y N 483 TRP CD1 C Y N 484 TRP CD2 C Y N 485 TRP NE1 N Y N 486 TRP CE2 C Y N 487 TRP CE3 C Y N 488 TRP CZ2 C Y N 489 TRP CZ3 C Y N 490 TRP CH2 C Y N 491 TRP OXT O N N 492 TRP H H N N 493 TRP H2 H N N 494 TRP HA H N N 495 TRP HB2 H N N 496 TRP HB3 H N N 497 TRP HD1 H N N 498 TRP HE1 H N N 499 TRP HE3 H N N 500 TRP HZ2 H N N 501 TRP HZ3 H N N 502 TRP HH2 H N N 503 TRP HXT H N N 504 TYR N N N N 505 TYR CA C N S 506 TYR C C N N 507 TYR O O N N 508 TYR CB C N N 509 TYR CG C Y N 510 TYR CD1 C Y N 511 TYR CD2 C Y N 512 TYR CE1 C Y N 513 TYR CE2 C Y N 514 TYR CZ C Y N 515 TYR OH O N N 516 TYR OXT O N N 517 TYR H H N N 518 TYR H2 H N N 519 TYR HA H N N 520 TYR HB2 H N N 521 TYR HB3 H N N 522 TYR HD1 H N N 523 TYR HD2 H N N 524 TYR HE1 H N N 525 TYR HE2 H N N 526 TYR HH H N N 527 TYR HXT H N N 528 VAL N N N N 529 VAL CA C N S 530 VAL C C N N 531 VAL O O N N 532 VAL CB C N N 533 VAL CG1 C N N 534 VAL CG2 C N N 535 VAL OXT O N N 536 VAL H H N N 537 VAL H2 H N N 538 VAL HA H N N 539 VAL HB H N N 540 VAL HG11 H N N 541 VAL HG12 H N N 542 VAL HG13 H N N 543 VAL HG21 H N N 544 VAL HG22 H N N 545 VAL HG23 H N N 546 VAL HXT H N N 547 ZN ZN ZN N N 548 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 GOL C1 O1 sing N N 278 GOL C1 C2 sing N N 279 GOL C1 H11 sing N N 280 GOL C1 H12 sing N N 281 GOL O1 HO1 sing N N 282 GOL C2 O2 sing N N 283 GOL C2 C3 sing N N 284 GOL C2 H2 sing N N 285 GOL O2 HO2 sing N N 286 GOL C3 O3 sing N N 287 GOL C3 H31 sing N N 288 GOL C3 H32 sing N N 289 GOL O3 HO3 sing N N 290 HIS N CA sing N N 291 HIS N H sing N N 292 HIS N H2 sing N N 293 HIS CA C sing N N 294 HIS CA CB sing N N 295 HIS CA HA sing N N 296 HIS C O doub N N 297 HIS C OXT sing N N 298 HIS CB CG sing N N 299 HIS CB HB2 sing N N 300 HIS CB HB3 sing N N 301 HIS CG ND1 sing Y N 302 HIS CG CD2 doub Y N 303 HIS ND1 CE1 doub Y N 304 HIS ND1 HD1 sing N N 305 HIS CD2 NE2 sing Y N 306 HIS CD2 HD2 sing N N 307 HIS CE1 NE2 sing Y N 308 HIS CE1 HE1 sing N N 309 HIS NE2 HE2 sing N N 310 HIS OXT HXT sing N N 311 HOH O H1 sing N N 312 HOH O H2 sing N N 313 ILE N CA sing N N 314 ILE N H sing N N 315 ILE N H2 sing N N 316 ILE CA C sing N N 317 ILE CA CB sing N N 318 ILE CA HA sing N N 319 ILE C O doub N N 320 ILE C OXT sing N N 321 ILE CB CG1 sing N N 322 ILE CB CG2 sing N N 323 ILE CB HB sing N N 324 ILE CG1 CD1 sing N N 325 ILE CG1 HG12 sing N N 326 ILE CG1 HG13 sing N N 327 ILE CG2 HG21 sing N N 328 ILE CG2 HG22 sing N N 329 ILE CG2 HG23 sing N N 330 ILE CD1 HD11 sing N N 331 ILE CD1 HD12 sing N N 332 ILE CD1 HD13 sing N N 333 ILE OXT HXT sing N N 334 LEU N CA sing N N 335 LEU N H sing N N 336 LEU N H2 sing N N 337 LEU CA C sing N N 338 LEU CA CB sing N N 339 LEU CA HA sing N N 340 LEU C O doub N N 341 LEU C OXT sing N N 342 LEU CB CG sing N N 343 LEU CB HB2 sing N N 344 LEU CB HB3 sing N N 345 LEU CG CD1 sing N N 346 LEU CG CD2 sing N N 347 LEU CG HG sing N N 348 LEU CD1 HD11 sing N N 349 LEU CD1 HD12 sing N N 350 LEU CD1 HD13 sing N N 351 LEU CD2 HD21 sing N N 352 LEU CD2 HD22 sing N N 353 LEU CD2 HD23 sing N N 354 LEU OXT HXT sing N N 355 LYS N CA sing N N 356 LYS N H sing N N 357 LYS N H2 sing N N 358 LYS CA C sing N N 359 LYS CA CB sing N N 360 LYS CA HA sing N N 361 LYS C O doub N N 362 LYS C OXT sing N N 363 LYS CB CG sing N N 364 LYS CB HB2 sing N N 365 LYS CB HB3 sing N N 366 LYS CG CD sing N N 367 LYS CG HG2 sing N N 368 LYS CG HG3 sing N N 369 LYS CD CE sing N N 370 LYS CD HD2 sing N N 371 LYS CD HD3 sing N N 372 LYS CE NZ sing N N 373 LYS CE HE2 sing N N 374 LYS CE HE3 sing N N 375 LYS NZ HZ1 sing N N 376 LYS NZ HZ2 sing N N 377 LYS NZ HZ3 sing N N 378 LYS OXT HXT sing N N 379 MET N CA sing N N 380 MET N H sing N N 381 MET N H2 sing N N 382 MET CA C sing N N 383 MET CA CB sing N N 384 MET CA HA sing N N 385 MET C O doub N N 386 MET C OXT sing N N 387 MET CB CG sing N N 388 MET CB HB2 sing N N 389 MET CB HB3 sing N N 390 MET CG SD sing N N 391 MET CG HG2 sing N N 392 MET CG HG3 sing N N 393 MET SD CE sing N N 394 MET CE HE1 sing N N 395 MET CE HE2 sing N N 396 MET CE HE3 sing N N 397 MET OXT HXT sing N N 398 PHE N CA sing N N 399 PHE N H sing N N 400 PHE N H2 sing N N 401 PHE CA C sing N N 402 PHE CA CB sing N N 403 PHE CA HA sing N N 404 PHE C O doub N N 405 PHE C OXT sing N N 406 PHE CB CG sing N N 407 PHE CB HB2 sing N N 408 PHE CB HB3 sing N N 409 PHE CG CD1 doub Y N 410 PHE CG CD2 sing Y N 411 PHE CD1 CE1 sing Y N 412 PHE CD1 HD1 sing N N 413 PHE CD2 CE2 doub Y N 414 PHE CD2 HD2 sing N N 415 PHE CE1 CZ doub Y N 416 PHE CE1 HE1 sing N N 417 PHE CE2 CZ sing Y N 418 PHE CE2 HE2 sing N N 419 PHE CZ HZ sing N N 420 PHE OXT HXT sing N N 421 PRO N CA sing N N 422 PRO N CD sing N N 423 PRO N H sing N N 424 PRO CA C sing N N 425 PRO CA CB sing N N 426 PRO CA HA sing N N 427 PRO C O doub N N 428 PRO C OXT sing N N 429 PRO CB CG sing N N 430 PRO CB HB2 sing N N 431 PRO CB HB3 sing N N 432 PRO CG CD sing N N 433 PRO CG HG2 sing N N 434 PRO CG HG3 sing N N 435 PRO CD HD2 sing N N 436 PRO CD HD3 sing N N 437 PRO OXT HXT sing N N 438 SER N CA sing N N 439 SER N H sing N N 440 SER N H2 sing N N 441 SER CA C sing N N 442 SER CA CB sing N N 443 SER CA HA sing N N 444 SER C O doub N N 445 SER C OXT sing N N 446 SER CB OG sing N N 447 SER CB HB2 sing N N 448 SER CB HB3 sing N N 449 SER OG HG sing N N 450 SER OXT HXT sing N N 451 THR N CA sing N N 452 THR N H sing N N 453 THR N H2 sing N N 454 THR CA C sing N N 455 THR CA CB sing N N 456 THR CA HA sing N N 457 THR C O doub N N 458 THR C OXT sing N N 459 THR CB OG1 sing N N 460 THR CB CG2 sing N N 461 THR CB HB sing N N 462 THR OG1 HG1 sing N N 463 THR CG2 HG21 sing N N 464 THR CG2 HG22 sing N N 465 THR CG2 HG23 sing N N 466 THR OXT HXT sing N N 467 TRP N CA sing N N 468 TRP N H sing N N 469 TRP N H2 sing N N 470 TRP CA C sing N N 471 TRP CA CB sing N N 472 TRP CA HA sing N N 473 TRP C O doub N N 474 TRP C OXT sing N N 475 TRP CB CG sing N N 476 TRP CB HB2 sing N N 477 TRP CB HB3 sing N N 478 TRP CG CD1 doub Y N 479 TRP CG CD2 sing Y N 480 TRP CD1 NE1 sing Y N 481 TRP CD1 HD1 sing N N 482 TRP CD2 CE2 doub Y N 483 TRP CD2 CE3 sing Y N 484 TRP NE1 CE2 sing Y N 485 TRP NE1 HE1 sing N N 486 TRP CE2 CZ2 sing Y N 487 TRP CE3 CZ3 doub Y N 488 TRP CE3 HE3 sing N N 489 TRP CZ2 CH2 doub Y N 490 TRP CZ2 HZ2 sing N N 491 TRP CZ3 CH2 sing Y N 492 TRP CZ3 HZ3 sing N N 493 TRP CH2 HH2 sing N N 494 TRP OXT HXT sing N N 495 TYR N CA sing N N 496 TYR N H sing N N 497 TYR N H2 sing N N 498 TYR CA C sing N N 499 TYR CA CB sing N N 500 TYR CA HA sing N N 501 TYR C O doub N N 502 TYR C OXT sing N N 503 TYR CB CG sing N N 504 TYR CB HB2 sing N N 505 TYR CB HB3 sing N N 506 TYR CG CD1 doub Y N 507 TYR CG CD2 sing Y N 508 TYR CD1 CE1 sing Y N 509 TYR CD1 HD1 sing N N 510 TYR CD2 CE2 doub Y N 511 TYR CD2 HD2 sing N N 512 TYR CE1 CZ doub Y N 513 TYR CE1 HE1 sing N N 514 TYR CE2 CZ sing Y N 515 TYR CE2 HE2 sing N N 516 TYR CZ OH sing N N 517 TYR OH HH sing N N 518 TYR OXT HXT sing N N 519 VAL N CA sing N N 520 VAL N H sing N N 521 VAL N H2 sing N N 522 VAL CA C sing N N 523 VAL CA CB sing N N 524 VAL CA HA sing N N 525 VAL C O doub N N 526 VAL C OXT sing N N 527 VAL CB CG1 sing N N 528 VAL CB CG2 sing N N 529 VAL CB HB sing N N 530 VAL CG1 HG11 sing N N 531 VAL CG1 HG12 sing N N 532 VAL CG1 HG13 sing N N 533 VAL CG2 HG21 sing N N 534 VAL CG2 HG22 sing N N 535 VAL CG2 HG23 sing N N 536 VAL OXT HXT sing N N 537 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3KMP 'double helix' 3KMP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 2 1_555 D DA 15 1_555 -2.010 -0.026 -0.244 8.429 -16.697 23.040 1 C_DT2:DA16_D C 2 ? D 16 ? ? 1 1 C DC 3 1_555 D DG 14 1_555 -0.972 -0.163 0.407 -1.991 -5.175 1.613 2 C_DC3:DG15_D C 3 ? D 15 ? 19 1 1 C DA 4 1_555 D DT 13 1_555 0.979 -0.270 0.079 1.253 -4.866 6.073 3 C_DA4:DT14_D C 4 ? D 14 ? 20 1 1 C DG 5 1_555 D DC 12 1_555 -0.508 -0.289 0.512 4.535 -2.531 -2.890 4 C_DG5:DC13_D C 5 ? D 13 ? 19 1 1 C DT 6 1_555 D DA 11 1_555 -0.076 0.000 0.229 -1.194 -7.779 -3.929 5 C_DT6:DA12_D C 6 ? D 12 ? 20 1 1 C DC 7 1_555 D DG 10 1_555 0.340 -0.295 0.430 -5.920 -9.907 -3.412 6 C_DC7:DG11_D C 7 ? D 11 ? 19 1 1 C DT 8 1_555 D DA 9 1_555 0.147 -0.200 -0.019 -3.950 -9.532 -2.924 7 C_DT8:DA10_D C 8 ? D 10 ? 20 1 1 C DA 9 1_555 D DT 8 1_555 -0.139 -0.137 -0.043 4.743 -8.492 -2.452 8 C_DA9:DT9_D C 9 ? D 9 ? 20 1 1 C DG 10 1_555 D DC 7 1_555 -0.149 -0.100 0.232 0.215 -9.485 -0.008 9 C_DG10:DC8_D C 10 ? D 8 ? 19 1 1 C DA 11 1_555 D DT 6 1_555 0.112 -0.288 0.250 3.998 -13.508 -3.552 10 C_DA11:DT7_D C 11 ? D 7 ? 20 1 1 C DC 12 1_555 D DG 5 1_555 0.238 -0.254 0.193 -1.652 -7.963 -0.557 11 C_DC12:DG6_D C 12 ? D 6 ? 19 1 1 C DA 13 1_555 D DT 4 1_555 0.109 -0.201 0.291 -4.792 -9.458 4.062 12 C_DA13:DT5_D C 13 ? D 5 ? 20 1 1 C DT 14 1_555 D DA 3 1_555 0.382 0.074 -0.289 -2.803 -12.553 5.507 13 C_DT14:DA4_D C 14 ? D 4 ? 20 1 1 C DA 15 1_555 D DT 2 1_555 0.448 -0.223 0.301 -33.604 -10.094 -5.868 14 C_DA15:DT3_D C 15 ? D 3 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 2 1_555 D DA 15 1_555 C DC 3 1_555 D DG 14 1_555 0.087 0.109 3.707 -9.734 2.131 45.561 -0.065 -1.036 3.617 2.714 12.395 46.582 1 CC_DT2DC3:DG15DA16_DD C 2 ? D 16 ? C 3 ? D 15 ? 1 C DC 3 1_555 D DG 14 1_555 C DA 4 1_555 D DT 13 1_555 0.025 0.267 3.270 4.021 2.956 41.167 0.061 0.395 3.269 4.185 -5.693 41.455 2 CC_DC3DA4:DT14DG15_DD C 3 ? D 15 ? C 4 ? D 14 ? 1 C DA 4 1_555 D DT 13 1_555 C DG 5 1_555 D DC 12 1_555 -0.235 -1.119 3.137 -6.008 0.302 24.503 -2.647 -1.158 3.091 0.697 13.890 25.219 3 CC_DA4DG5:DC13DT14_DD C 4 ? D 14 ? C 5 ? D 13 ? 1 C DG 5 1_555 D DC 12 1_555 C DT 6 1_555 D DA 11 1_555 -0.816 -0.987 3.377 2.155 2.875 35.702 -2.020 1.638 3.237 4.674 -3.504 35.876 4 CC_DG5DT6:DA12DC13_DD C 5 ? D 13 ? C 6 ? D 12 ? 1 C DT 6 1_555 D DA 11 1_555 C DC 7 1_555 D DG 10 1_555 -0.081 -0.288 3.347 -0.167 4.755 37.895 -1.051 0.102 3.288 7.287 0.256 38.181 5 CC_DT6DC7:DG11DA12_DD C 6 ? D 12 ? C 7 ? D 11 ? 1 C DC 7 1_555 D DG 10 1_555 C DT 8 1_555 D DA 9 1_555 -0.215 0.161 3.273 4.963 0.985 29.566 0.108 1.435 3.198 1.912 -9.637 29.986 6 CC_DC7DT8:DA10DG11_DD C 7 ? D 11 ? C 8 ? D 10 ? 1 C DT 8 1_555 D DA 9 1_555 C DA 9 1_555 D DT 8 1_555 0.021 2.478 3.009 -0.310 -6.473 50.449 3.283 -0.044 2.693 -7.558 0.362 50.837 7 CC_DT8DA9:DT9DA10_DD C 8 ? D 10 ? C 9 ? D 9 ? 1 C DA 9 1_555 D DT 8 1_555 C DG 10 1_555 D DC 7 1_555 0.191 0.341 3.456 -3.477 3.006 30.155 0.014 -1.097 3.430 5.736 6.634 30.495 8 CC_DA9DG10:DC8DT9_DD C 9 ? D 9 ? C 10 ? D 8 ? 1 C DG 10 1_555 D DC 7 1_555 C DA 11 1_555 D DT 6 1_555 0.088 -0.201 3.185 0.311 2.324 37.011 -0.618 -0.098 3.168 3.657 -0.489 37.082 9 CC_DG10DA11:DT7DC8_DD C 10 ? D 8 ? C 11 ? D 7 ? 1 C DA 11 1_555 D DT 6 1_555 C DC 12 1_555 D DG 5 1_555 1.040 -0.869 3.363 1.155 1.142 33.260 -1.712 -1.617 3.365 1.993 -2.017 33.299 10 CC_DA11DC12:DG6DT7_DD C 11 ? D 7 ? C 12 ? D 6 ? 1 C DC 12 1_555 D DG 5 1_555 C DA 13 1_555 D DT 4 1_555 0.176 -0.349 3.217 1.791 3.921 34.312 -1.180 -0.026 3.164 6.614 -3.021 34.573 11 CC_DC12DA13:DT5DG6_DD C 12 ? D 6 ? C 13 ? D 5 ? 1 C DA 13 1_555 D DT 4 1_555 C DT 14 1_555 D DA 3 1_555 -0.257 0.111 3.345 6.654 -6.299 37.969 0.937 1.200 3.198 -9.513 -10.049 39.019 12 CC_DA13DT14:DA4DT5_DD C 13 ? D 5 ? C 14 ? D 4 ? 1 C DT 14 1_555 D DA 3 1_555 C DA 15 1_555 D DT 2 1_555 -0.041 -1.369 4.205 -1.658 1.960 23.260 -4.222 -0.614 4.071 4.842 4.096 23.399 13 CC_DT14DA15:DT3DA4_DD C 14 ? D 4 ? C 15 ? D 3 ? # _atom_sites.entry_id 3KMP _atom_sites.fract_transf_matrix[1][1] 0.013525 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012905 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011936 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S ZN # loop_