data_3KSR # _entry.id 3KSR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KSR pdb_00003ksr 10.2210/pdb3ksr/pdb RCSB RCSB056401 ? ? WWPDB D_1000056401 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 383078 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3KSR _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-11-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative serine hydrolase (NP_639225.1) from XANTHOMONAS CAMPESTRIS at 2.69 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3KSR _cell.length_a 56.865 _cell.length_b 56.865 _cell.length_c 220.250 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KSR _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative serine hydrolase' 32026.279 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)EAKLSSIEIPVGQDELSGTLLTPTG(MSE)PGVLFVHGWGGSQHHSLVRAREAVGLGCIC(MSE)TFDLRGHEG YAS(MSE)RQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPK VSLNADPDL(MSE)DYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPV(MSE)RNYADAFTNARSLTSRVIAGA DHALSVKEHQQEYTRALIDWLTE(MSE)VVGRRIALAKEVVAARKQLLKEQQGDAVSLPGQGSREFRGDIRAVEKTSA ; _entity_poly.pdbx_seq_one_letter_code_can ;GMEAKLSSIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQ NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRA LAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEM VVGRRIALAKEVVAARKQLLKEQQGDAVSLPGQGSREFRGDIRAVEKTSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 383078 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLU n 1 4 ALA n 1 5 LYS n 1 6 LEU n 1 7 SER n 1 8 SER n 1 9 ILE n 1 10 GLU n 1 11 ILE n 1 12 PRO n 1 13 VAL n 1 14 GLY n 1 15 GLN n 1 16 ASP n 1 17 GLU n 1 18 LEU n 1 19 SER n 1 20 GLY n 1 21 THR n 1 22 LEU n 1 23 LEU n 1 24 THR n 1 25 PRO n 1 26 THR n 1 27 GLY n 1 28 MSE n 1 29 PRO n 1 30 GLY n 1 31 VAL n 1 32 LEU n 1 33 PHE n 1 34 VAL n 1 35 HIS n 1 36 GLY n 1 37 TRP n 1 38 GLY n 1 39 GLY n 1 40 SER n 1 41 GLN n 1 42 HIS n 1 43 HIS n 1 44 SER n 1 45 LEU n 1 46 VAL n 1 47 ARG n 1 48 ALA n 1 49 ARG n 1 50 GLU n 1 51 ALA n 1 52 VAL n 1 53 GLY n 1 54 LEU n 1 55 GLY n 1 56 CYS n 1 57 ILE n 1 58 CYS n 1 59 MSE n 1 60 THR n 1 61 PHE n 1 62 ASP n 1 63 LEU n 1 64 ARG n 1 65 GLY n 1 66 HIS n 1 67 GLU n 1 68 GLY n 1 69 TYR n 1 70 ALA n 1 71 SER n 1 72 MSE n 1 73 ARG n 1 74 GLN n 1 75 SER n 1 76 VAL n 1 77 THR n 1 78 ARG n 1 79 ALA n 1 80 GLN n 1 81 ASN n 1 82 LEU n 1 83 ASP n 1 84 ASP n 1 85 ILE n 1 86 LYS n 1 87 ALA n 1 88 ALA n 1 89 TYR n 1 90 ASP n 1 91 GLN n 1 92 LEU n 1 93 ALA n 1 94 SER n 1 95 LEU n 1 96 PRO n 1 97 TYR n 1 98 VAL n 1 99 ASP n 1 100 ALA n 1 101 HIS n 1 102 SER n 1 103 ILE n 1 104 ALA n 1 105 VAL n 1 106 VAL n 1 107 GLY n 1 108 LEU n 1 109 SER n 1 110 TYR n 1 111 GLY n 1 112 GLY n 1 113 TYR n 1 114 LEU n 1 115 SER n 1 116 ALA n 1 117 LEU n 1 118 LEU n 1 119 THR n 1 120 ARG n 1 121 GLU n 1 122 ARG n 1 123 PRO n 1 124 VAL n 1 125 GLU n 1 126 TRP n 1 127 LEU n 1 128 ALA n 1 129 LEU n 1 130 ARG n 1 131 SER n 1 132 PRO n 1 133 ALA n 1 134 LEU n 1 135 TYR n 1 136 LYS n 1 137 ASP n 1 138 ALA n 1 139 HIS n 1 140 TRP n 1 141 ASP n 1 142 GLN n 1 143 PRO n 1 144 LYS n 1 145 VAL n 1 146 SER n 1 147 LEU n 1 148 ASN n 1 149 ALA n 1 150 ASP n 1 151 PRO n 1 152 ASP n 1 153 LEU n 1 154 MSE n 1 155 ASP n 1 156 TYR n 1 157 ARG n 1 158 ARG n 1 159 ARG n 1 160 ALA n 1 161 LEU n 1 162 ALA n 1 163 PRO n 1 164 GLY n 1 165 ASP n 1 166 ASN n 1 167 LEU n 1 168 ALA n 1 169 LEU n 1 170 ALA n 1 171 ALA n 1 172 CYS n 1 173 ALA n 1 174 GLN n 1 175 TYR n 1 176 LYS n 1 177 GLY n 1 178 ASP n 1 179 VAL n 1 180 LEU n 1 181 LEU n 1 182 VAL n 1 183 GLU n 1 184 ALA n 1 185 GLU n 1 186 ASN n 1 187 ASP n 1 188 VAL n 1 189 ILE n 1 190 VAL n 1 191 PRO n 1 192 HIS n 1 193 PRO n 1 194 VAL n 1 195 MSE n 1 196 ARG n 1 197 ASN n 1 198 TYR n 1 199 ALA n 1 200 ASP n 1 201 ALA n 1 202 PHE n 1 203 THR n 1 204 ASN n 1 205 ALA n 1 206 ARG n 1 207 SER n 1 208 LEU n 1 209 THR n 1 210 SER n 1 211 ARG n 1 212 VAL n 1 213 ILE n 1 214 ALA n 1 215 GLY n 1 216 ALA n 1 217 ASP n 1 218 HIS n 1 219 ALA n 1 220 LEU n 1 221 SER n 1 222 VAL n 1 223 LYS n 1 224 GLU n 1 225 HIS n 1 226 GLN n 1 227 GLN n 1 228 GLU n 1 229 TYR n 1 230 THR n 1 231 ARG n 1 232 ALA n 1 233 LEU n 1 234 ILE n 1 235 ASP n 1 236 TRP n 1 237 LEU n 1 238 THR n 1 239 GLU n 1 240 MSE n 1 241 VAL n 1 242 VAL n 1 243 GLY n 1 244 ARG n 1 245 ARG n 1 246 ILE n 1 247 ALA n 1 248 LEU n 1 249 ALA n 1 250 LYS n 1 251 GLU n 1 252 VAL n 1 253 VAL n 1 254 ALA n 1 255 ALA n 1 256 ARG n 1 257 LYS n 1 258 GLN n 1 259 LEU n 1 260 LEU n 1 261 LYS n 1 262 GLU n 1 263 GLN n 1 264 GLN n 1 265 GLY n 1 266 ASP n 1 267 ALA n 1 268 VAL n 1 269 SER n 1 270 LEU n 1 271 PRO n 1 272 GLY n 1 273 GLN n 1 274 GLY n 1 275 SER n 1 276 ARG n 1 277 GLU n 1 278 PHE n 1 279 ARG n 1 280 GLY n 1 281 ASP n 1 282 ILE n 1 283 ARG n 1 284 ALA n 1 285 VAL n 1 286 GLU n 1 287 LYS n 1 288 THR n 1 289 SER n 1 290 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene XCC3885 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xanthomonas campestris pv. campestris str. ATCC 33913' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 190485 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8P431_XANCP _struct_ref.pdbx_db_accession Q8P431 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEAKLSSIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQN LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRAL APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMV VGRRIALAKEVVAARKQLLKEQQGDAVSLPGQGSREFRGDIRAVEKTSA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KSR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 290 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8P431 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 289 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 289 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3KSR _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8P431 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3KSR # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.64 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;1.82M di-ammonium hydrogen phosphate, 0.2M sodium chloride, 0.1M Imidazole pH 7.64, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-05-26 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97849 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97849 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3KSR _reflns.d_resolution_high 2.69 _reflns.d_resolution_low 39.559 _reflns.number_obs 10299 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_netI_over_sigmaI 17.220 _reflns.percent_possible_obs 94.400 _reflns.B_iso_Wilson_estimate 81.766 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.69 2.79 3162 ? 1642 0.693 1.3 ? ? ? ? ? 83.20 1 1 2.79 2.90 4449 ? 1704 0.551 2.1 ? ? ? ? ? 89.50 2 1 2.90 3.03 6568 ? 1852 0.435 3.2 ? ? ? ? ? 97.90 3 1 3.03 3.19 6753 ? 1855 0.246 5.5 ? ? ? ? ? 97.60 4 1 3.19 3.39 7067 ? 1886 0.140 9.5 ? ? ? ? ? 97.30 5 1 3.39 3.65 7100 ? 1832 0.088 15.0 ? ? ? ? ? 97.20 6 1 3.65 4.01 7352 ? 1850 0.053 22.8 ? ? ? ? ? 96.70 7 1 4.01 4.59 7374 ? 1847 0.036 31.4 ? ? ? ? ? 96.10 8 1 4.59 5.75 7414 ? 1840 0.031 36.4 ? ? ? ? ? 95.80 9 1 5.75 39.559 7467 ? 1853 0.026 42.2 ? ? ? ? ? 93.10 10 1 # _refine.entry_id 3KSR _refine.ls_d_res_high 2.690 _refine.ls_d_res_low 39.559 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.390 _refine.ls_number_reflns_obs 10275 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. PHOSPHATE (PO4) AND CHLORIDE (CL) MODELLED ARE PRESENT IN CRYSTALLIZATION CONDITION. 4. RAMACHANDRAN OUTLIER (G242) IS LIKELY DUE TO POOR QUALITY OF THE MAPS AT THIS LOCATION. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_R_work 0.197 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.222 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 497 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 45.347 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.550 _refine.aniso_B[2][2] 0.550 _refine.aniso_B[3][3] -1.100 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.498 _refine.pdbx_overall_ESU_R_Free 0.271 _refine.overall_SU_ML 0.192 _refine.overall_SU_B 21.998 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 100.68 _refine.B_iso_min 20.72 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1857 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 1878 _refine_hist.d_res_high 2.690 _refine_hist.d_res_low 39.559 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1905 0.014 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1242 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2595 1.517 1.963 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3027 0.975 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 242 5.488 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 83 37.732 23.735 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 301 15.764 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 13 17.027 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 292 0.081 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2141 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 376 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1207 1.405 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 492 0.265 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1927 2.617 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 698 5.150 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 668 7.151 11.000 ? ? # _refine_ls_shell.d_res_high 2.691 _refine_ls_shell.d_res_low 2.761 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 92.180 _refine_ls_shell.number_reflns_R_work 677 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.369 _refine_ls_shell.R_factor_R_free 0.395 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 719 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3KSR _struct.title 'CRYSTAL STRUCTURE OF A PUTATIVE SERINE HYDROLASE (XCC3885) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 2.69 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;SERINE HYDROLASE, CATALYTIC TRIAD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3KSR # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 44 ? LEU A 54 ? SER A 43 LEU A 53 1 ? 11 HELX_P HELX_P2 2 HIS A 66 ? ARG A 73 ? HIS A 65 ARG A 72 5 ? 8 HELX_P HELX_P3 3 THR A 77 ? SER A 94 ? THR A 76 SER A 93 1 ? 18 HELX_P HELX_P4 4 SER A 109 ? THR A 119 ? SER A 108 THR A 118 1 ? 11 HELX_P HELX_P5 5 PRO A 143 ? ASP A 150 ? PRO A 142 ASP A 149 1 ? 8 HELX_P HELX_P6 6 ASP A 152 ? ARG A 157 ? ASP A 151 ARG A 156 1 ? 6 HELX_P HELX_P7 7 ALA A 162 ? ASP A 165 ? ALA A 161 ASP A 164 5 ? 4 HELX_P HELX_P8 8 ASN A 166 ? TYR A 175 ? ASN A 165 TYR A 174 1 ? 10 HELX_P HELX_P9 9 PRO A 191 ? PHE A 202 ? PRO A 190 PHE A 201 1 ? 12 HELX_P HELX_P10 10 VAL A 222 ? GLY A 243 ? VAL A 221 GLY A 242 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A GLU 3 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? A MSE 28 C ? ? ? 1_555 A PRO 29 N ? ? A MSE 27 A PRO 28 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? A MSE 59 C ? ? ? 1_555 A THR 60 N ? ? A MSE 58 A THR 59 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? A MSE 72 C ? ? ? 1_555 A ARG 73 N ? ? A MSE 71 A ARG 72 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale5 covale both ? A MSE 154 C ? ? ? 1_555 A ASP 155 N ? ? A MSE 153 A ASP 154 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale6 covale both ? A MSE 195 C ? ? ? 1_555 A ARG 196 N ? ? A MSE 194 A ARG 195 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale7 covale both ? A MSE 240 C ? ? ? 1_555 A VAL 241 N ? ? A MSE 239 A VAL 240 1_555 ? ? ? ? ? ? ? 1.319 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 3 ? VAL A 13 ? GLU A 2 VAL A 12 A 2 ASP A 16 ? THR A 26 ? ASP A 15 THR A 25 B 1 ILE A 57 ? MSE A 59 ? ILE A 56 MSE A 58 B 2 MSE A 28 ? VAL A 34 ? MSE A 27 VAL A 33 B 3 VAL A 98 ? LEU A 108 ? VAL A 97 LEU A 107 B 4 TRP A 126 ? ARG A 130 ? TRP A 125 ARG A 129 B 5 ASP A 178 ? ALA A 184 ? ASP A 177 ALA A 183 B 6 SER A 207 ? ILE A 213 ? SER A 206 ILE A 212 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 5 ? N LYS A 4 O THR A 24 ? O THR A 23 B 1 2 O ILE A 57 ? O ILE A 56 N VAL A 31 ? N VAL A 30 B 2 3 N LEU A 32 ? N LEU A 31 O VAL A 106 ? O VAL A 105 B 3 4 N GLY A 107 ? N GLY A 106 O ARG A 130 ? O ARG A 129 B 4 5 N LEU A 129 ? N LEU A 128 O LEU A 180 ? O LEU A 179 B 5 6 N GLU A 183 ? N GLU A 182 O ILE A 213 ? O ILE A 212 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 290 ? 7 'BINDING SITE FOR RESIDUE PO4 A 290' AC2 Software A PO4 291 ? 2 'BINDING SITE FOR RESIDUE PO4 A 291' AC3 Software A CL 292 ? 4 'BINDING SITE FOR RESIDUE CL A 292' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TRP A 37 ? TRP A 36 . ? 1_555 ? 2 AC1 7 TYR A 135 ? TYR A 134 . ? 1_555 ? 3 AC1 7 LYS A 144 ? LYS A 143 . ? 1_555 ? 4 AC1 7 ASN A 148 ? ASN A 147 . ? 1_555 ? 5 AC1 7 ARG A 157 ? ARG A 156 . ? 1_555 ? 6 AC1 7 ILE A 189 ? ILE A 188 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 300 . ? 1_555 ? 8 AC2 2 LYS A 86 ? LYS A 85 . ? 1_555 ? 9 AC2 2 ARG A 122 ? ARG A 121 . ? 1_555 ? 10 AC3 4 ASP A 187 ? ASP A 186 . ? 1_555 ? 11 AC3 4 VAL A 188 ? VAL A 187 . ? 1_555 ? 12 AC3 4 ASP A 217 ? ASP A 216 . ? 1_555 ? 13 AC3 4 HIS A 218 ? HIS A 217 . ? 1_555 ? # _atom_sites.entry_id 3KSR _atom_sites.fract_transf_matrix[1][1] 0.017585 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017585 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004540 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 LYS 5 4 4 LYS LYS A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 SER 19 18 18 SER SER A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 GLY 27 26 26 GLY GLY A . n A 1 28 MSE 28 27 27 MSE MSE A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 PHE 33 32 32 PHE PHE A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 HIS 35 34 34 HIS HIS A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 TRP 37 36 36 TRP TRP A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 GLN 41 40 40 GLN GLN A . n A 1 42 HIS 42 41 41 HIS HIS A . n A 1 43 HIS 43 42 42 HIS HIS A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 CYS 56 55 55 CYS CYS A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 CYS 58 57 57 CYS CYS A . n A 1 59 MSE 59 58 58 MSE MSE A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 PHE 61 60 60 PHE PHE A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 ARG 64 63 63 ARG ARG A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 HIS 66 65 65 HIS HIS A . n A 1 67 GLU 67 66 66 GLU GLU A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 MSE 72 71 71 MSE MSE A . n A 1 73 ARG 73 72 72 ARG ARG A . n A 1 74 GLN 74 73 73 GLN GLN A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 VAL 76 75 75 VAL VAL A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 ARG 78 77 77 ARG ARG A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 ASN 81 80 80 ASN ASN A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 LYS 86 85 85 LYS LYS A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 TYR 89 88 88 TYR TYR A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 GLN 91 90 90 GLN GLN A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 TYR 97 96 96 TYR TYR A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 ASP 99 98 98 ASP ASP A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 HIS 101 100 100 HIS HIS A . n A 1 102 SER 102 101 101 SER SER A . n A 1 103 ILE 103 102 102 ILE ILE A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 TYR 113 112 112 TYR TYR A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 SER 115 114 114 SER SER A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 ARG 120 119 119 ARG ARG A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 ARG 122 121 121 ARG ARG A . n A 1 123 PRO 123 122 122 PRO PRO A . n A 1 124 VAL 124 123 123 VAL VAL A . n A 1 125 GLU 125 124 124 GLU GLU A . n A 1 126 TRP 126 125 125 TRP TRP A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 ARG 130 129 129 ARG ARG A . n A 1 131 SER 131 130 130 SER SER A . n A 1 132 PRO 132 131 131 PRO PRO A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 LYS 136 135 135 LYS LYS A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 HIS 139 138 138 HIS HIS A . n A 1 140 TRP 140 139 139 TRP TRP A . n A 1 141 ASP 141 140 140 ASP ASP A . n A 1 142 GLN 142 141 141 GLN GLN A . n A 1 143 PRO 143 142 142 PRO PRO A . n A 1 144 LYS 144 143 143 LYS LYS A . n A 1 145 VAL 145 144 144 VAL VAL A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 ASN 148 147 147 ASN ASN A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 ASP 150 149 149 ASP ASP A . n A 1 151 PRO 151 150 150 PRO PRO A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 LEU 153 152 152 LEU LEU A . n A 1 154 MSE 154 153 153 MSE MSE A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 TYR 156 155 155 TYR TYR A . n A 1 157 ARG 157 156 156 ARG ARG A . n A 1 158 ARG 158 157 157 ARG ARG A . n A 1 159 ARG 159 158 158 ARG ARG A . n A 1 160 ALA 160 159 159 ALA ALA A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 PRO 163 162 162 PRO PRO A . n A 1 164 GLY 164 163 163 GLY GLY A . n A 1 165 ASP 165 164 164 ASP ASP A . n A 1 166 ASN 166 165 165 ASN ASN A . n A 1 167 LEU 167 166 166 LEU LEU A . n A 1 168 ALA 168 167 167 ALA ALA A . n A 1 169 LEU 169 168 168 LEU LEU A . n A 1 170 ALA 170 169 169 ALA ALA A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 CYS 172 171 171 CYS CYS A . n A 1 173 ALA 173 172 172 ALA ALA A . n A 1 174 GLN 174 173 173 GLN GLN A . n A 1 175 TYR 175 174 174 TYR TYR A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 ASP 178 177 177 ASP ASP A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 LEU 181 180 180 LEU LEU A . n A 1 182 VAL 182 181 181 VAL VAL A . n A 1 183 GLU 183 182 182 GLU GLU A . n A 1 184 ALA 184 183 183 ALA ALA A . n A 1 185 GLU 185 184 184 GLU GLU A . n A 1 186 ASN 186 185 185 ASN ASN A . n A 1 187 ASP 187 186 186 ASP ASP A . n A 1 188 VAL 188 187 187 VAL VAL A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 VAL 190 189 189 VAL VAL A . n A 1 191 PRO 191 190 190 PRO PRO A . n A 1 192 HIS 192 191 191 HIS HIS A . n A 1 193 PRO 193 192 192 PRO PRO A . n A 1 194 VAL 194 193 193 VAL VAL A . n A 1 195 MSE 195 194 194 MSE MSE A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 ASN 197 196 196 ASN ASN A . n A 1 198 TYR 198 197 197 TYR TYR A . n A 1 199 ALA 199 198 198 ALA ALA A . n A 1 200 ASP 200 199 199 ASP ASP A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 PHE 202 201 201 PHE PHE A . n A 1 203 THR 203 202 202 THR THR A . n A 1 204 ASN 204 203 203 ASN ASN A . n A 1 205 ALA 205 204 204 ALA ALA A . n A 1 206 ARG 206 205 205 ARG ARG A . n A 1 207 SER 207 206 206 SER SER A . n A 1 208 LEU 208 207 207 LEU LEU A . n A 1 209 THR 209 208 208 THR THR A . n A 1 210 SER 210 209 209 SER SER A . n A 1 211 ARG 211 210 210 ARG ARG A . n A 1 212 VAL 212 211 211 VAL VAL A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 GLY 215 214 214 GLY GLY A . n A 1 216 ALA 216 215 215 ALA ALA A . n A 1 217 ASP 217 216 216 ASP ASP A . n A 1 218 HIS 218 217 217 HIS HIS A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 LEU 220 219 219 LEU LEU A . n A 1 221 SER 221 220 220 SER SER A . n A 1 222 VAL 222 221 221 VAL VAL A . n A 1 223 LYS 223 222 222 LYS LYS A . n A 1 224 GLU 224 223 223 GLU GLU A . n A 1 225 HIS 225 224 224 HIS HIS A . n A 1 226 GLN 226 225 225 GLN GLN A . n A 1 227 GLN 227 226 226 GLN GLN A . n A 1 228 GLU 228 227 227 GLU GLU A . n A 1 229 TYR 229 228 228 TYR TYR A . n A 1 230 THR 230 229 229 THR THR A . n A 1 231 ARG 231 230 230 ARG ARG A . n A 1 232 ALA 232 231 231 ALA ALA A . n A 1 233 LEU 233 232 232 LEU LEU A . n A 1 234 ILE 234 233 233 ILE ILE A . n A 1 235 ASP 235 234 234 ASP ASP A . n A 1 236 TRP 236 235 235 TRP TRP A . n A 1 237 LEU 237 236 236 LEU LEU A . n A 1 238 THR 238 237 237 THR THR A . n A 1 239 GLU 239 238 238 GLU GLU A . n A 1 240 MSE 240 239 239 MSE MSE A . n A 1 241 VAL 241 240 240 VAL VAL A . n A 1 242 VAL 242 241 241 VAL VAL A . n A 1 243 GLY 243 242 242 GLY GLY A . n A 1 244 ARG 244 243 243 ARG ARG A . n A 1 245 ARG 245 244 ? ? ? A . n A 1 246 ILE 246 245 ? ? ? A . n A 1 247 ALA 247 246 ? ? ? A . n A 1 248 LEU 248 247 ? ? ? A . n A 1 249 ALA 249 248 ? ? ? A . n A 1 250 LYS 250 249 ? ? ? A . n A 1 251 GLU 251 250 ? ? ? A . n A 1 252 VAL 252 251 ? ? ? A . n A 1 253 VAL 253 252 ? ? ? A . n A 1 254 ALA 254 253 ? ? ? A . n A 1 255 ALA 255 254 ? ? ? A . n A 1 256 ARG 256 255 ? ? ? A . n A 1 257 LYS 257 256 ? ? ? A . n A 1 258 GLN 258 257 ? ? ? A . n A 1 259 LEU 259 258 ? ? ? A . n A 1 260 LEU 260 259 ? ? ? A . n A 1 261 LYS 261 260 ? ? ? A . n A 1 262 GLU 262 261 ? ? ? A . n A 1 263 GLN 263 262 ? ? ? A . n A 1 264 GLN 264 263 ? ? ? A . n A 1 265 GLY 265 264 ? ? ? A . n A 1 266 ASP 266 265 ? ? ? A . n A 1 267 ALA 267 266 ? ? ? A . n A 1 268 VAL 268 267 ? ? ? A . n A 1 269 SER 269 268 ? ? ? A . n A 1 270 LEU 270 269 ? ? ? A . n A 1 271 PRO 271 270 ? ? ? A . n A 1 272 GLY 272 271 ? ? ? A . n A 1 273 GLN 273 272 ? ? ? A . n A 1 274 GLY 274 273 ? ? ? A . n A 1 275 SER 275 274 ? ? ? A . n A 1 276 ARG 276 275 ? ? ? A . n A 1 277 GLU 277 276 ? ? ? A . n A 1 278 PHE 278 277 ? ? ? A . n A 1 279 ARG 279 278 ? ? ? A . n A 1 280 GLY 280 279 ? ? ? A . n A 1 281 ASP 281 280 ? ? ? A . n A 1 282 ILE 282 281 ? ? ? A . n A 1 283 ARG 283 282 ? ? ? A . n A 1 284 ALA 284 283 ? ? ? A . n A 1 285 VAL 285 284 ? ? ? A . n A 1 286 GLU 286 285 ? ? ? A . n A 1 287 LYS 287 286 ? ? ? A . n A 1 288 THR 288 287 ? ? ? A . n A 1 289 SER 289 288 ? ? ? A . n A 1 290 ALA 290 289 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 290 1 PO4 PO4 A . C 2 PO4 1 291 2 PO4 PO4 A . D 3 CL 1 292 3 CL CL A . E 4 HOH 1 293 4 HOH HOH A . E 4 HOH 2 294 5 HOH HOH A . E 4 HOH 3 295 6 HOH HOH A . E 4 HOH 4 296 7 HOH HOH A . E 4 HOH 5 297 8 HOH HOH A . E 4 HOH 6 298 9 HOH HOH A . E 4 HOH 7 299 10 HOH HOH A . E 4 HOH 8 300 11 HOH HOH A . E 4 HOH 9 301 12 HOH HOH A . E 4 HOH 10 302 13 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 28 A MSE 27 ? MET SELENOMETHIONINE 3 A MSE 59 A MSE 58 ? MET SELENOMETHIONINE 4 A MSE 72 A MSE 71 ? MET SELENOMETHIONINE 5 A MSE 154 A MSE 153 ? MET SELENOMETHIONINE 6 A MSE 195 A MSE 194 ? MET SELENOMETHIONINE 7 A MSE 240 A MSE 239 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4550 ? 1 MORE -68 ? 1 'SSA (A^2)' 19790 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 110.1250000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.4660 _pdbx_refine_tls.origin_y 12.2514 _pdbx_refine_tls.origin_z 66.9184 _pdbx_refine_tls.T[1][1] 0.2135 _pdbx_refine_tls.T[2][2] 0.0861 _pdbx_refine_tls.T[3][3] 0.1219 _pdbx_refine_tls.T[1][2] -0.0927 _pdbx_refine_tls.T[1][3] -0.0868 _pdbx_refine_tls.T[2][3] 0.0448 _pdbx_refine_tls.L[1][1] 1.2317 _pdbx_refine_tls.L[2][2] 1.4436 _pdbx_refine_tls.L[3][3] 1.6784 _pdbx_refine_tls.L[1][2] 0.5999 _pdbx_refine_tls.L[1][3] 0.7020 _pdbx_refine_tls.L[2][3] 1.3580 _pdbx_refine_tls.S[1][1] -0.1264 _pdbx_refine_tls.S[2][2] 0.1428 _pdbx_refine_tls.S[3][3] -0.0165 _pdbx_refine_tls.S[1][2] 0.1757 _pdbx_refine_tls.S[1][3] 0.0937 _pdbx_refine_tls.S[2][3] -0.1726 _pdbx_refine_tls.S[2][1] -0.1466 _pdbx_refine_tls.S[3][1] -0.2296 _pdbx_refine_tls.S[3][2] 0.1408 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 243 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0053 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3KSR _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 55 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 55 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.699 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.113 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 46 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 46 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 46 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.24 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.06 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 66 ? ? 60.58 -115.48 2 1 SER A 108 ? ? 41.71 -115.03 3 1 THR A 202 ? ? -77.06 24.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 119 ? CG ? A ARG 120 CG 2 1 Y 1 A ARG 119 ? CD ? A ARG 120 CD 3 1 Y 1 A ARG 119 ? NE ? A ARG 120 NE 4 1 Y 1 A ARG 119 ? CZ ? A ARG 120 CZ 5 1 Y 1 A ARG 119 ? NH1 ? A ARG 120 NH1 6 1 Y 1 A ARG 119 ? NH2 ? A ARG 120 NH2 7 1 Y 1 A ARG 210 ? CG ? A ARG 211 CG 8 1 Y 1 A ARG 210 ? CD ? A ARG 211 CD 9 1 Y 1 A ARG 210 ? NE ? A ARG 211 NE 10 1 Y 1 A ARG 210 ? CZ ? A ARG 211 CZ 11 1 Y 1 A ARG 210 ? NH1 ? A ARG 211 NH1 12 1 Y 1 A ARG 210 ? NH2 ? A ARG 211 NH2 13 1 Y 1 A ARG 230 ? CZ ? A ARG 231 CZ 14 1 Y 1 A ARG 230 ? NH1 ? A ARG 231 NH1 15 1 Y 1 A ARG 230 ? NH2 ? A ARG 231 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ARG 244 ? A ARG 245 3 1 Y 1 A ILE 245 ? A ILE 246 4 1 Y 1 A ALA 246 ? A ALA 247 5 1 Y 1 A LEU 247 ? A LEU 248 6 1 Y 1 A ALA 248 ? A ALA 249 7 1 Y 1 A LYS 249 ? A LYS 250 8 1 Y 1 A GLU 250 ? A GLU 251 9 1 Y 1 A VAL 251 ? A VAL 252 10 1 Y 1 A VAL 252 ? A VAL 253 11 1 Y 1 A ALA 253 ? A ALA 254 12 1 Y 1 A ALA 254 ? A ALA 255 13 1 Y 1 A ARG 255 ? A ARG 256 14 1 Y 1 A LYS 256 ? A LYS 257 15 1 Y 1 A GLN 257 ? A GLN 258 16 1 Y 1 A LEU 258 ? A LEU 259 17 1 Y 1 A LEU 259 ? A LEU 260 18 1 Y 1 A LYS 260 ? A LYS 261 19 1 Y 1 A GLU 261 ? A GLU 262 20 1 Y 1 A GLN 262 ? A GLN 263 21 1 Y 1 A GLN 263 ? A GLN 264 22 1 Y 1 A GLY 264 ? A GLY 265 23 1 Y 1 A ASP 265 ? A ASP 266 24 1 Y 1 A ALA 266 ? A ALA 267 25 1 Y 1 A VAL 267 ? A VAL 268 26 1 Y 1 A SER 268 ? A SER 269 27 1 Y 1 A LEU 269 ? A LEU 270 28 1 Y 1 A PRO 270 ? A PRO 271 29 1 Y 1 A GLY 271 ? A GLY 272 30 1 Y 1 A GLN 272 ? A GLN 273 31 1 Y 1 A GLY 273 ? A GLY 274 32 1 Y 1 A SER 274 ? A SER 275 33 1 Y 1 A ARG 275 ? A ARG 276 34 1 Y 1 A GLU 276 ? A GLU 277 35 1 Y 1 A PHE 277 ? A PHE 278 36 1 Y 1 A ARG 278 ? A ARG 279 37 1 Y 1 A GLY 279 ? A GLY 280 38 1 Y 1 A ASP 280 ? A ASP 281 39 1 Y 1 A ILE 281 ? A ILE 282 40 1 Y 1 A ARG 282 ? A ARG 283 41 1 Y 1 A ALA 283 ? A ALA 284 42 1 Y 1 A VAL 284 ? A VAL 285 43 1 Y 1 A GLU 285 ? A GLU 286 44 1 Y 1 A LYS 286 ? A LYS 287 45 1 Y 1 A THR 287 ? A THR 288 46 1 Y 1 A SER 288 ? A SER 289 47 1 Y 1 A ALA 289 ? A ALA 290 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'CHLORIDE ION' CL 4 water HOH #