data_3KUS # _entry.id 3KUS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KUS pdb_00003kus 10.2210/pdb3kus/pdb RCSB RCSB056473 ? ? WWPDB D_1000056473 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KUR . unspecified PDB 3KUT . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KUS _pdbx_database_status.recvd_initial_deposition_date 2009-11-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kozlov, G.' 1 'Gehring, K.' 2 # _citation.id primary _citation.title 'Molecular Determinants of PAM2 Recognition by the MLLE Domain of Poly(A)-Binding Protein.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 397 _citation.page_first 397 _citation.page_last 407 _citation.year 2010 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20096703 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2010.01.032 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kozlov, G.' 1 ? primary 'Menade, M.' 2 ? primary 'Rosenauer, A.' 3 ? primary 'Nguyen, L.' 4 ? primary 'Gehring, K.' 5 ? # _cell.entry_id 3KUS _cell.length_a 26.396 _cell.length_b 31.610 _cell.length_c 48.214 _cell.angle_alpha 100.12 _cell.angle_beta 92.26 _cell.angle_gamma 98.90 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KUS _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polyadenylate-binding protein 1' 9421.909 2 ? ? 'C-terminal domain' ? 2 polymer syn 'PAIP2 protein' 1615.827 2 ? ? 'PABPC1-binding region' ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 water nat water 18.015 128 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Poly(A)-binding protein 1, PABP 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQ AKEAAQKA ; ;GPLGSPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQ AKEAAQKA ; A,B ? 2 'polypeptide(L)' no no SNLNPNAKEFVPGVK SNLNPNAKEFVPGVK C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 LEU n 1 8 THR n 1 9 ALA n 1 10 SER n 1 11 MET n 1 12 LEU n 1 13 ALA n 1 14 SER n 1 15 ALA n 1 16 PRO n 1 17 PRO n 1 18 GLN n 1 19 GLU n 1 20 GLN n 1 21 LYS n 1 22 GLN n 1 23 MET n 1 24 LEU n 1 25 GLY n 1 26 GLU n 1 27 ARG n 1 28 LEU n 1 29 PHE n 1 30 PRO n 1 31 LEU n 1 32 ILE n 1 33 GLN n 1 34 ALA n 1 35 MET n 1 36 HIS n 1 37 PRO n 1 38 THR n 1 39 LEU n 1 40 ALA n 1 41 GLY n 1 42 LYS n 1 43 ILE n 1 44 THR n 1 45 GLY n 1 46 MET n 1 47 LEU n 1 48 LEU n 1 49 GLU n 1 50 ILE n 1 51 ASP n 1 52 ASN n 1 53 SER n 1 54 GLU n 1 55 LEU n 1 56 LEU n 1 57 HIS n 1 58 MET n 1 59 LEU n 1 60 GLU n 1 61 SER n 1 62 PRO n 1 63 GLU n 1 64 SER n 1 65 LEU n 1 66 ARG n 1 67 SER n 1 68 LYS n 1 69 VAL n 1 70 ASP n 1 71 GLU n 1 72 ALA n 1 73 VAL n 1 74 ALA n 1 75 VAL n 1 76 LEU n 1 77 GLN n 1 78 ALA n 1 79 HIS n 1 80 GLN n 1 81 ALA n 1 82 LYS n 1 83 GLU n 1 84 ALA n 1 85 ALA n 1 86 GLN n 1 87 LYS n 1 88 ALA n 2 1 SER n 2 2 ASN n 2 3 LEU n 2 4 ASN n 2 5 PRO n 2 6 ASN n 2 7 ALA n 2 8 LYS n 2 9 GLU n 2 10 PHE n 2 11 VAL n 2 12 PRO n 2 13 GLY n 2 14 VAL n 2 15 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PABPC1, PAB1, PABP1, PABPC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'chemically synthesized' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PABP1_HUMAN P11940 1 ;PLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA QKA ; 544 ? 2 UNP Q6FID7_HUMAN Q6FID7 2 SNLNPNAKEFVPGVK 109 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KUS A 6 ? 88 ? P11940 544 ? 626 ? 544 626 2 1 3KUS B 6 ? 88 ? P11940 544 ? 626 ? 544 626 3 2 3KUS C 1 ? 15 ? Q6FID7 109 ? 123 ? 109 123 4 2 3KUS D 1 ? 15 ? Q6FID7 109 ? 123 ? 109 123 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KUS GLY A 1 ? UNP P11940 ? ? 'expression tag' 539 1 1 3KUS PRO A 2 ? UNP P11940 ? ? 'expression tag' 540 2 1 3KUS LEU A 3 ? UNP P11940 ? ? 'expression tag' 541 3 1 3KUS GLY A 4 ? UNP P11940 ? ? 'expression tag' 542 4 1 3KUS SER A 5 ? UNP P11940 ? ? 'expression tag' 543 5 2 3KUS GLY B 1 ? UNP P11940 ? ? 'expression tag' 539 6 2 3KUS PRO B 2 ? UNP P11940 ? ? 'expression tag' 540 7 2 3KUS LEU B 3 ? UNP P11940 ? ? 'expression tag' 541 8 2 3KUS GLY B 4 ? UNP P11940 ? ? 'expression tag' 542 9 2 3KUS SER B 5 ? UNP P11940 ? ? 'expression tag' 543 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KUS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.77 _exptl_crystal.density_percent_sol 30.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '2.3M ammonium sulfate, 0.1M HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2009-04-30 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F2' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9950 # _reflns.entry_id 3KUS _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.40 _reflns.number_obs 27147 _reflns.number_all 28308 _reflns.percent_possible_obs 95.9 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.42 _reflns_shell.percent_possible_all 90.2 _reflns_shell.Rmerge_I_obs 0.240 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.0 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1857 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3KUS _refine.ls_number_reflns_obs 27147 _refine.ls_number_reflns_all 28308 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.35 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 95.73 _refine.ls_R_factor_obs 0.17941 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17808 _refine.ls_R_factor_R_free 0.20514 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1438 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 10.843 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] 0.19 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] 0.47 _refine.aniso_B[1][3] -0.10 _refine.aniso_B[2][3] -0.15 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1I2T' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.069 _refine.pdbx_overall_ESU_R_Free 0.070 _refine.overall_SU_ML 0.036 _refine.overall_SU_B 1.765 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1343 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 1492 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 47.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1397 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.052 2.019 ? 1891 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.864 5.000 ? 179 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.680 26.727 ? 55 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.357 15.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.362 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.061 0.200 ? 219 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1016 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 695 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 974 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.096 0.200 ? 70 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.174 0.200 ? 59 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.160 0.200 ? 15 'X-RAY DIFFRACTION' ? r_mcbond_it 0.770 1.500 ? 925 'X-RAY DIFFRACTION' ? r_mcangle_it 1.005 2.000 ? 1441 'X-RAY DIFFRACTION' ? r_scbond_it 1.997 3.000 ? 503 'X-RAY DIFFRACTION' ? r_scangle_it 3.085 4.500 ? 447 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.40 _refine_ls_shell.d_res_low 1.435 _refine_ls_shell.number_reflns_R_work 1857 _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.percent_reflns_obs 88.70 _refine_ls_shell.R_factor_R_free 0.226 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3KUS _struct.title 'Crystal structure of the MLLE domain of poly(A)-binding protein in complex with the binding region of Paip2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KUS _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;protein-protein complex, Methylation, mRNA processing, mRNA splicing, Nucleus, Phosphoprotein, RNA-binding, Spliceosome, PROTEIN BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? SER A 14 ? THR A 546 SER A 552 1 ? 7 HELX_P HELX_P2 2 PRO A 16 ? HIS A 36 ? PRO A 554 HIS A 574 1 ? 21 HELX_P HELX_P3 3 LEU A 39 ? GLU A 49 ? LEU A 577 GLU A 587 1 ? 11 HELX_P HELX_P4 4 ASP A 51 ? SER A 61 ? ASP A 589 SER A 599 1 ? 11 HELX_P HELX_P5 5 SER A 61 ? ALA A 88 ? SER A 599 ALA A 626 1 ? 28 HELX_P HELX_P6 6 PRO B 16 ? HIS B 36 ? PRO B 554 HIS B 574 1 ? 21 HELX_P HELX_P7 7 LEU B 39 ? GLU B 49 ? LEU B 577 GLU B 587 1 ? 11 HELX_P HELX_P8 8 ASP B 51 ? LEU B 59 ? ASP B 589 LEU B 597 1 ? 9 HELX_P HELX_P9 9 SER B 61 ? ALA B 84 ? SER B 599 ALA B 622 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 1 ? 5 'BINDING SITE FOR RESIDUE GOL A 1' AC2 Software B EPE 1 ? 7 'BINDING SITE FOR RESIDUE EPE B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 36 ? HIS A 574 . ? 1_555 ? 2 AC1 5 PRO A 37 ? PRO A 575 . ? 1_555 ? 3 AC1 5 THR A 38 ? THR A 576 . ? 1_555 ? 4 AC1 5 LEU A 39 ? LEU A 577 . ? 1_555 ? 5 AC1 5 ARG B 66 ? ARG B 604 . ? 1_555 ? 6 AC2 7 ARG A 66 ? ARG A 604 . ? 1_555 ? 7 AC2 7 HOH H . ? HOH B 130 . ? 1_555 ? 8 AC2 7 HIS B 36 ? HIS B 574 . ? 1_555 ? 9 AC2 7 PRO B 37 ? PRO B 575 . ? 1_555 ? 10 AC2 7 THR B 38 ? THR B 576 . ? 1_555 ? 11 AC2 7 LEU B 39 ? LEU B 577 . ? 1_555 ? 12 AC2 7 LYS D 15 ? LYS D 123 . ? 1_565 ? # _database_PDB_matrix.entry_id 3KUS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KUS _atom_sites.fract_transf_matrix[1][1] 0.037885 _atom_sites.fract_transf_matrix[1][2] 0.005935 _atom_sites.fract_transf_matrix[1][3] 0.002634 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032021 _atom_sites.fract_transf_matrix[2][3] 0.005998 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021118 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 539 ? ? ? A . n A 1 2 PRO 2 540 ? ? ? A . n A 1 3 LEU 3 541 ? ? ? A . n A 1 4 GLY 4 542 ? ? ? A . n A 1 5 SER 5 543 ? ? ? A . n A 1 6 PRO 6 544 ? ? ? A . n A 1 7 LEU 7 545 545 LEU LEU A . n A 1 8 THR 8 546 546 THR THR A . n A 1 9 ALA 9 547 547 ALA ALA A . n A 1 10 SER 10 548 548 SER SER A . n A 1 11 MET 11 549 549 MET MET A . n A 1 12 LEU 12 550 550 LEU LEU A . n A 1 13 ALA 13 551 551 ALA ALA A . n A 1 14 SER 14 552 552 SER SER A . n A 1 15 ALA 15 553 553 ALA ALA A . n A 1 16 PRO 16 554 554 PRO PRO A . n A 1 17 PRO 17 555 555 PRO PRO A . n A 1 18 GLN 18 556 556 GLN GLN A . n A 1 19 GLU 19 557 557 GLU GLU A . n A 1 20 GLN 20 558 558 GLN GLN A . n A 1 21 LYS 21 559 559 LYS LYS A . n A 1 22 GLN 22 560 560 GLN GLN A . n A 1 23 MET 23 561 561 MET MET A . n A 1 24 LEU 24 562 562 LEU LEU A . n A 1 25 GLY 25 563 563 GLY GLY A . n A 1 26 GLU 26 564 564 GLU GLU A . n A 1 27 ARG 27 565 565 ARG ARG A . n A 1 28 LEU 28 566 566 LEU LEU A . n A 1 29 PHE 29 567 567 PHE PHE A . n A 1 30 PRO 30 568 568 PRO PRO A . n A 1 31 LEU 31 569 569 LEU LEU A . n A 1 32 ILE 32 570 570 ILE ILE A . n A 1 33 GLN 33 571 571 GLN GLN A . n A 1 34 ALA 34 572 572 ALA ALA A . n A 1 35 MET 35 573 573 MET MET A . n A 1 36 HIS 36 574 574 HIS HIS A . n A 1 37 PRO 37 575 575 PRO PRO A . n A 1 38 THR 38 576 576 THR THR A . n A 1 39 LEU 39 577 577 LEU LEU A . n A 1 40 ALA 40 578 578 ALA ALA A . n A 1 41 GLY 41 579 579 GLY GLY A . n A 1 42 LYS 42 580 580 LYS LYS A . n A 1 43 ILE 43 581 581 ILE ILE A . n A 1 44 THR 44 582 582 THR THR A . n A 1 45 GLY 45 583 583 GLY GLY A . n A 1 46 MET 46 584 584 MET MET A . n A 1 47 LEU 47 585 585 LEU LEU A . n A 1 48 LEU 48 586 586 LEU LEU A . n A 1 49 GLU 49 587 587 GLU GLU A . n A 1 50 ILE 50 588 588 ILE ILE A . n A 1 51 ASP 51 589 589 ASP ASP A . n A 1 52 ASN 52 590 590 ASN ASN A . n A 1 53 SER 53 591 591 SER SER A . n A 1 54 GLU 54 592 592 GLU GLU A . n A 1 55 LEU 55 593 593 LEU LEU A . n A 1 56 LEU 56 594 594 LEU LEU A . n A 1 57 HIS 57 595 595 HIS HIS A . n A 1 58 MET 58 596 596 MET MET A . n A 1 59 LEU 59 597 597 LEU LEU A . n A 1 60 GLU 60 598 598 GLU GLU A . n A 1 61 SER 61 599 599 SER SER A . n A 1 62 PRO 62 600 600 PRO PRO A . n A 1 63 GLU 63 601 601 GLU GLU A . n A 1 64 SER 64 602 602 SER SER A . n A 1 65 LEU 65 603 603 LEU LEU A . n A 1 66 ARG 66 604 604 ARG ARG A . n A 1 67 SER 67 605 605 SER SER A . n A 1 68 LYS 68 606 606 LYS LYS A . n A 1 69 VAL 69 607 607 VAL VAL A . n A 1 70 ASP 70 608 608 ASP ASP A . n A 1 71 GLU 71 609 609 GLU GLU A . n A 1 72 ALA 72 610 610 ALA ALA A . n A 1 73 VAL 73 611 611 VAL VAL A . n A 1 74 ALA 74 612 612 ALA ALA A . n A 1 75 VAL 75 613 613 VAL VAL A . n A 1 76 LEU 76 614 614 LEU LEU A . n A 1 77 GLN 77 615 615 GLN GLN A . n A 1 78 ALA 78 616 616 ALA ALA A . n A 1 79 HIS 79 617 617 HIS HIS A . n A 1 80 GLN 80 618 618 GLN GLN A . n A 1 81 ALA 81 619 619 ALA ALA A . n A 1 82 LYS 82 620 620 LYS LYS A . n A 1 83 GLU 83 621 621 GLU GLU A . n A 1 84 ALA 84 622 622 ALA ALA A . n A 1 85 ALA 85 623 623 ALA ALA A . n A 1 86 GLN 86 624 624 GLN GLN A . n A 1 87 LYS 87 625 625 LYS LYS A . n A 1 88 ALA 88 626 626 ALA ALA A . n B 1 1 GLY 1 539 ? ? ? B . n B 1 2 PRO 2 540 ? ? ? B . n B 1 3 LEU 3 541 ? ? ? B . n B 1 4 GLY 4 542 ? ? ? B . n B 1 5 SER 5 543 ? ? ? B . n B 1 6 PRO 6 544 ? ? ? B . n B 1 7 LEU 7 545 ? ? ? B . n B 1 8 THR 8 546 ? ? ? B . n B 1 9 ALA 9 547 ? ? ? B . n B 1 10 SER 10 548 ? ? ? B . n B 1 11 MET 11 549 ? ? ? B . n B 1 12 LEU 12 550 ? ? ? B . n B 1 13 ALA 13 551 ? ? ? B . n B 1 14 SER 14 552 ? ? ? B . n B 1 15 ALA 15 553 553 ALA ALA B . n B 1 16 PRO 16 554 554 PRO PRO B . n B 1 17 PRO 17 555 555 PRO PRO B . n B 1 18 GLN 18 556 556 GLN GLN B . n B 1 19 GLU 19 557 557 GLU GLU B . n B 1 20 GLN 20 558 558 GLN GLN B . n B 1 21 LYS 21 559 559 LYS LYS B . n B 1 22 GLN 22 560 560 GLN GLN B . n B 1 23 MET 23 561 561 MET MET B . n B 1 24 LEU 24 562 562 LEU LEU B . n B 1 25 GLY 25 563 563 GLY GLY B . n B 1 26 GLU 26 564 564 GLU GLU B . n B 1 27 ARG 27 565 565 ARG ARG B . n B 1 28 LEU 28 566 566 LEU LEU B . n B 1 29 PHE 29 567 567 PHE PHE B . n B 1 30 PRO 30 568 568 PRO PRO B . n B 1 31 LEU 31 569 569 LEU LEU B . n B 1 32 ILE 32 570 570 ILE ILE B . n B 1 33 GLN 33 571 571 GLN GLN B . n B 1 34 ALA 34 572 572 ALA ALA B . n B 1 35 MET 35 573 573 MET MET B . n B 1 36 HIS 36 574 574 HIS HIS B . n B 1 37 PRO 37 575 575 PRO PRO B . n B 1 38 THR 38 576 576 THR THR B . n B 1 39 LEU 39 577 577 LEU LEU B . n B 1 40 ALA 40 578 578 ALA ALA B . n B 1 41 GLY 41 579 579 GLY GLY B . n B 1 42 LYS 42 580 580 LYS LYS B . n B 1 43 ILE 43 581 581 ILE ILE B . n B 1 44 THR 44 582 582 THR THR B . n B 1 45 GLY 45 583 583 GLY GLY B . n B 1 46 MET 46 584 584 MET MET B . n B 1 47 LEU 47 585 585 LEU LEU B . n B 1 48 LEU 48 586 586 LEU LEU B . n B 1 49 GLU 49 587 587 GLU GLU B . n B 1 50 ILE 50 588 588 ILE ILE B . n B 1 51 ASP 51 589 589 ASP ASP B . n B 1 52 ASN 52 590 590 ASN ASN B . n B 1 53 SER 53 591 591 SER SER B . n B 1 54 GLU 54 592 592 GLU GLU B . n B 1 55 LEU 55 593 593 LEU LEU B . n B 1 56 LEU 56 594 594 LEU LEU B . n B 1 57 HIS 57 595 595 HIS HIS B . n B 1 58 MET 58 596 596 MET MET B . n B 1 59 LEU 59 597 597 LEU LEU B . n B 1 60 GLU 60 598 598 GLU GLU B . n B 1 61 SER 61 599 599 SER SER B . n B 1 62 PRO 62 600 600 PRO PRO B . n B 1 63 GLU 63 601 601 GLU GLU B . n B 1 64 SER 64 602 602 SER SER B . n B 1 65 LEU 65 603 603 LEU LEU B . n B 1 66 ARG 66 604 604 ARG ARG B . n B 1 67 SER 67 605 605 SER SER B . n B 1 68 LYS 68 606 606 LYS LYS B . n B 1 69 VAL 69 607 607 VAL VAL B . n B 1 70 ASP 70 608 608 ASP ASP B . n B 1 71 GLU 71 609 609 GLU GLU B . n B 1 72 ALA 72 610 610 ALA ALA B . n B 1 73 VAL 73 611 611 VAL VAL B . n B 1 74 ALA 74 612 612 ALA ALA B . n B 1 75 VAL 75 613 613 VAL VAL B . n B 1 76 LEU 76 614 614 LEU LEU B . n B 1 77 GLN 77 615 615 GLN GLN B . n B 1 78 ALA 78 616 616 ALA ALA B . n B 1 79 HIS 79 617 617 HIS HIS B . n B 1 80 GLN 80 618 618 GLN GLN B . n B 1 81 ALA 81 619 619 ALA ALA B . n B 1 82 LYS 82 620 620 LYS ALA B . n B 1 83 GLU 83 621 621 GLU ALA B . n B 1 84 ALA 84 622 622 ALA ALA B . n B 1 85 ALA 85 623 ? ? ? B . n B 1 86 GLN 86 624 ? ? ? B . n B 1 87 LYS 87 625 ? ? ? B . n B 1 88 ALA 88 626 ? ? ? B . n C 2 1 SER 1 109 ? ? ? C . n C 2 2 ASN 2 110 ? ? ? C . n C 2 3 LEU 3 111 111 LEU LEU C . n C 2 4 ASN 4 112 112 ASN ASN C . n C 2 5 PRO 5 113 113 PRO PRO C . n C 2 6 ASN 6 114 114 ASN ASN C . n C 2 7 ALA 7 115 115 ALA ALA C . n C 2 8 LYS 8 116 116 LYS LYS C . n C 2 9 GLU 9 117 117 GLU GLU C . n C 2 10 PHE 10 118 118 PHE PHE C . n C 2 11 VAL 11 119 119 VAL VAL C . n C 2 12 PRO 12 120 120 PRO PRO C . n C 2 13 GLY 13 121 121 GLY GLY C . n C 2 14 VAL 14 122 ? ? ? C . n C 2 15 LYS 15 123 ? ? ? C . n D 2 1 SER 1 109 ? ? ? D . n D 2 2 ASN 2 110 110 ASN ASN D . n D 2 3 LEU 3 111 111 LEU LEU D . n D 2 4 ASN 4 112 112 ASN ASN D . n D 2 5 PRO 5 113 113 PRO PRO D . n D 2 6 ASN 6 114 114 ASN ASN D . n D 2 7 ALA 7 115 115 ALA ALA D . n D 2 8 LYS 8 116 116 LYS LYS D . n D 2 9 GLU 9 117 117 GLU GLU D . n D 2 10 PHE 10 118 118 PHE PHE D . n D 2 11 VAL 11 119 119 VAL VAL D . n D 2 12 PRO 12 120 120 PRO PRO D . n D 2 13 GLY 13 121 121 GLY GLY D . n D 2 14 VAL 14 122 122 VAL VAL D . n D 2 15 LYS 15 123 123 LYS LYS D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL 1 1 1 GOL GOL A . F 4 EPE 1 1 1 EPE EPE B . G 5 HOH 1 3 3 HOH HOH A . G 5 HOH 2 7 7 HOH HOH A . G 5 HOH 3 8 8 HOH HOH A . G 5 HOH 4 11 11 HOH HOH A . G 5 HOH 5 12 12 HOH HOH A . G 5 HOH 6 13 13 HOH HOH A . G 5 HOH 7 16 16 HOH HOH A . G 5 HOH 8 17 17 HOH HOH A . G 5 HOH 9 19 19 HOH HOH A . G 5 HOH 10 20 20 HOH HOH A . G 5 HOH 11 22 22 HOH HOH A . G 5 HOH 12 23 23 HOH HOH A . G 5 HOH 13 24 24 HOH HOH A . G 5 HOH 14 26 26 HOH HOH A . G 5 HOH 15 27 27 HOH HOH A . G 5 HOH 16 28 28 HOH HOH A . G 5 HOH 17 29 29 HOH HOH A . G 5 HOH 18 36 36 HOH HOH A . G 5 HOH 19 37 37 HOH HOH A . G 5 HOH 20 38 38 HOH HOH A . G 5 HOH 21 47 47 HOH HOH A . G 5 HOH 22 49 49 HOH HOH A . G 5 HOH 23 50 50 HOH HOH A . G 5 HOH 24 54 54 HOH HOH A . G 5 HOH 25 57 57 HOH HOH A . G 5 HOH 26 63 63 HOH HOH A . G 5 HOH 27 64 64 HOH HOH A . G 5 HOH 28 65 65 HOH HOH A . G 5 HOH 29 67 67 HOH HOH A . G 5 HOH 30 71 71 HOH HOH A . G 5 HOH 31 74 74 HOH HOH A . G 5 HOH 32 76 76 HOH HOH A . G 5 HOH 33 77 77 HOH HOH A . G 5 HOH 34 79 79 HOH HOH A . G 5 HOH 35 87 87 HOH HOH A . G 5 HOH 36 90 90 HOH HOH A . G 5 HOH 37 100 100 HOH HOH A . G 5 HOH 38 101 101 HOH HOH A . G 5 HOH 39 102 102 HOH HOH A . G 5 HOH 40 103 103 HOH HOH A . G 5 HOH 41 112 112 HOH HOH A . G 5 HOH 42 115 115 HOH HOH A . G 5 HOH 43 117 117 HOH HOH A . G 5 HOH 44 129 129 HOH HOH A . G 5 HOH 45 133 133 HOH HOH A . G 5 HOH 46 139 139 HOH HOH A . G 5 HOH 47 153 153 HOH HOH A . G 5 HOH 48 161 161 HOH HOH A . G 5 HOH 49 173 173 HOH HOH A . G 5 HOH 50 187 187 HOH HOH A . G 5 HOH 51 193 193 HOH HOH A . G 5 HOH 52 194 194 HOH HOH A . G 5 HOH 53 198 198 HOH HOH A . G 5 HOH 54 199 199 HOH HOH A . G 5 HOH 55 210 210 HOH HOH A . G 5 HOH 56 211 211 HOH HOH A . G 5 HOH 57 212 212 HOH HOH A . G 5 HOH 58 213 213 HOH HOH A . G 5 HOH 59 216 216 HOH HOH A . G 5 HOH 60 230 230 HOH HOH A . G 5 HOH 61 237 237 HOH HOH A . G 5 HOH 62 240 240 HOH HOH A . G 5 HOH 63 627 1 HOH HOH A . H 5 HOH 1 2 2 HOH HOH B . H 5 HOH 2 4 4 HOH HOH B . H 5 HOH 3 6 6 HOH HOH B . H 5 HOH 4 9 9 HOH HOH B . H 5 HOH 5 10 10 HOH HOH B . H 5 HOH 6 14 14 HOH HOH B . H 5 HOH 7 15 15 HOH HOH B . H 5 HOH 8 18 18 HOH HOH B . H 5 HOH 9 21 21 HOH HOH B . H 5 HOH 10 33 33 HOH HOH B . H 5 HOH 11 34 34 HOH HOH B . H 5 HOH 12 40 40 HOH HOH B . H 5 HOH 13 41 41 HOH HOH B . H 5 HOH 14 43 43 HOH HOH B . H 5 HOH 15 44 44 HOH HOH B . H 5 HOH 16 51 51 HOH HOH B . H 5 HOH 17 52 52 HOH HOH B . H 5 HOH 18 53 53 HOH HOH B . H 5 HOH 19 56 56 HOH HOH B . H 5 HOH 20 60 60 HOH HOH B . H 5 HOH 21 61 61 HOH HOH B . H 5 HOH 22 62 62 HOH HOH B . H 5 HOH 23 66 66 HOH HOH B . H 5 HOH 24 78 78 HOH HOH B . H 5 HOH 25 82 82 HOH HOH B . H 5 HOH 26 85 85 HOH HOH B . H 5 HOH 27 86 86 HOH HOH B . H 5 HOH 28 88 88 HOH HOH B . H 5 HOH 29 89 89 HOH HOH B . H 5 HOH 30 92 92 HOH HOH B . H 5 HOH 31 94 94 HOH HOH B . H 5 HOH 32 96 96 HOH HOH B . H 5 HOH 33 99 99 HOH HOH B . H 5 HOH 34 105 105 HOH HOH B . H 5 HOH 35 109 109 HOH HOH B . H 5 HOH 36 114 114 HOH HOH B . H 5 HOH 37 120 120 HOH HOH B . H 5 HOH 38 122 122 HOH HOH B . H 5 HOH 39 128 128 HOH HOH B . H 5 HOH 40 130 130 HOH HOH B . H 5 HOH 41 138 138 HOH HOH B . H 5 HOH 42 140 140 HOH HOH B . H 5 HOH 43 150 150 HOH HOH B . H 5 HOH 44 178 178 HOH HOH B . H 5 HOH 45 188 188 HOH HOH B . H 5 HOH 46 192 192 HOH HOH B . H 5 HOH 47 208 208 HOH HOH B . H 5 HOH 48 214 214 HOH HOH B . H 5 HOH 49 217 217 HOH HOH B . H 5 HOH 50 231 231 HOH HOH B . I 5 HOH 1 5 5 HOH HOH C . I 5 HOH 2 25 25 HOH HOH C . I 5 HOH 3 48 48 HOH HOH C . I 5 HOH 4 84 84 HOH HOH C . I 5 HOH 5 203 203 HOH HOH C . I 5 HOH 6 204 204 HOH HOH C . I 5 HOH 7 206 206 HOH HOH C . J 5 HOH 1 35 35 HOH HOH D . J 5 HOH 2 42 42 HOH HOH D . J 5 HOH 3 45 45 HOH HOH D . J 5 HOH 4 55 55 HOH HOH D . J 5 HOH 5 58 58 HOH HOH D . J 5 HOH 6 59 59 HOH HOH D . J 5 HOH 7 209 209 HOH HOH D . J 5 HOH 8 229 229 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G,I 2 1 B,D,F,H,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1410 ? 1 MORE -9 ? 1 'SSA (A^2)' 5600 ? 2 'ABSA (A^2)' 1560 ? 2 MORE -4 ? 2 'SSA (A^2)' 5610 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 11.8519 -8.1923 -19.1301 -0.0185 -0.0489 0.0521 -0.0169 0.0541 -0.0257 8.8717 5.5550 7.4788 -2.3675 3.4522 -0.3422 -0.0844 0.1485 -0.1403 -0.0987 -0.0907 -0.2897 0.1252 0.0014 0.1751 'X-RAY DIFFRACTION' 2 ? refined 4.8276 3.1178 -14.4476 0.0190 0.0260 0.0212 -0.0043 0.0017 -0.0034 1.6694 0.7721 1.2790 -0.6000 -0.5559 0.3555 0.0171 0.0642 -0.0348 -0.0141 -0.0390 -0.0077 0.0095 0.0327 0.0218 'X-RAY DIFFRACTION' 3 ? refined 2.4394 15.3256 -14.7676 0.0269 0.0269 0.0682 -0.0094 -0.0085 0.0047 4.7283 3.3423 2.0155 -3.5141 2.2579 -1.6954 0.0092 0.0878 0.0603 -0.0469 -0.0715 0.0969 -0.0304 0.0165 0.0623 'X-RAY DIFFRACTION' 4 ? refined 6.2028 2.5264 7.9070 0.0144 0.0532 0.0194 0.0051 -0.0041 -0.0008 0.7434 1.9565 3.4662 -0.0721 -0.4372 -0.4821 -0.0201 -0.0631 -0.0347 0.0899 0.0461 -0.0417 0.0465 0.0059 -0.0260 'X-RAY DIFFRACTION' 5 ? refined -3.6046 1.4973 10.5462 -0.0038 0.0726 -0.0031 0.0014 0.0171 0.0141 4.8761 1.3592 4.0310 1.4270 3.7797 1.1001 -0.0391 -0.2921 0.1483 0.0906 -0.0035 0.1001 -0.1163 -0.3710 0.0427 'X-RAY DIFFRACTION' 6 ? refined 1.1110 14.1320 6.9422 0.0504 0.0260 0.0050 0.0334 -0.0025 -0.0195 3.8711 7.3630 4.9460 3.8464 3.6281 4.2014 -0.0683 -0.1288 0.0828 0.2208 0.0792 -0.1792 -0.2573 -0.0873 -0.0109 'X-RAY DIFFRACTION' 7 ? refined -1.6231 5.4486 -19.8138 -0.0011 0.0435 0.0255 0.0165 -0.0341 -0.0318 3.1453 14.8392 5.1661 3.9980 -3.0966 -5.6785 0.0155 0.2145 -0.0305 -0.2249 -0.0007 0.3785 -0.0539 -0.2588 -0.0148 'X-RAY DIFFRACTION' 8 ? refined 4.3763 11.3008 16.7420 0.1003 -0.0040 -0.0623 0.0430 0.0288 -0.0062 14.8829 18.1969 15.5633 -7.5928 1.4716 -1.7360 0.1767 -0.4033 -0.1517 0.6037 0.2505 0.4778 -0.4449 -0.4923 -0.4272 'X-RAY DIFFRACTION' 9 ? refined 13.4087 -0.7546 7.6343 -0.0029 0.0424 0.0210 -0.0080 0.0119 0.0014 13.5369 21.9660 11.3374 -10.9195 -5.4224 9.1589 0.0205 0.4111 -0.3199 -0.6295 0.0319 -0.3126 -0.0298 0.1582 -0.0523 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 545 ? ? A 556 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 557 ? ? A 595 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 596 ? ? A 626 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 553 ? ? B 585 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 586 ? ? B 597 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 598 ? ? B 622 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 C 111 ? ? C 121 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 D 110 ? ? D 116 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 D 117 ? ? D 123 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 620 ? CG ? B LYS 82 CG 2 1 Y 1 B LYS 620 ? CD ? B LYS 82 CD 3 1 Y 1 B LYS 620 ? CE ? B LYS 82 CE 4 1 Y 1 B LYS 620 ? NZ ? B LYS 82 NZ 5 1 Y 1 B GLU 621 ? CG ? B GLU 83 CG 6 1 Y 1 B GLU 621 ? CD ? B GLU 83 CD 7 1 Y 1 B GLU 621 ? OE1 ? B GLU 83 OE1 8 1 Y 1 B GLU 621 ? OE2 ? B GLU 83 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 539 ? A GLY 1 2 1 Y 1 A PRO 540 ? A PRO 2 3 1 Y 1 A LEU 541 ? A LEU 3 4 1 Y 1 A GLY 542 ? A GLY 4 5 1 Y 1 A SER 543 ? A SER 5 6 1 Y 1 A PRO 544 ? A PRO 6 7 1 Y 1 B GLY 539 ? B GLY 1 8 1 Y 1 B PRO 540 ? B PRO 2 9 1 Y 1 B LEU 541 ? B LEU 3 10 1 Y 1 B GLY 542 ? B GLY 4 11 1 Y 1 B SER 543 ? B SER 5 12 1 Y 1 B PRO 544 ? B PRO 6 13 1 Y 1 B LEU 545 ? B LEU 7 14 1 Y 1 B THR 546 ? B THR 8 15 1 Y 1 B ALA 547 ? B ALA 9 16 1 Y 1 B SER 548 ? B SER 10 17 1 Y 1 B MET 549 ? B MET 11 18 1 Y 1 B LEU 550 ? B LEU 12 19 1 Y 1 B ALA 551 ? B ALA 13 20 1 Y 1 B SER 552 ? B SER 14 21 1 Y 1 B ALA 623 ? B ALA 85 22 1 Y 1 B GLN 624 ? B GLN 86 23 1 Y 1 B LYS 625 ? B LYS 87 24 1 Y 1 B ALA 626 ? B ALA 88 25 1 Y 1 C SER 109 ? C SER 1 26 1 Y 1 C ASN 110 ? C ASN 2 27 1 Y 1 C VAL 122 ? C VAL 14 28 1 Y 1 C LYS 123 ? C LYS 15 29 1 Y 1 D SER 109 ? D SER 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 EPE N1 N N N 74 EPE C2 C N N 75 EPE C3 C N N 76 EPE N4 N N N 77 EPE C5 C N N 78 EPE C6 C N N 79 EPE C7 C N N 80 EPE C8 C N N 81 EPE O8 O N N 82 EPE C9 C N N 83 EPE C10 C N N 84 EPE S S N N 85 EPE O1S O N N 86 EPE O2S O N N 87 EPE O3S O N N 88 EPE H21 H N N 89 EPE H22 H N N 90 EPE H31 H N N 91 EPE H32 H N N 92 EPE H51 H N N 93 EPE H52 H N N 94 EPE H61 H N N 95 EPE H62 H N N 96 EPE H71 H N N 97 EPE H72 H N N 98 EPE H81 H N N 99 EPE H82 H N N 100 EPE HO8 H N N 101 EPE H91 H N N 102 EPE H92 H N N 103 EPE H101 H N N 104 EPE H102 H N N 105 EPE HOS3 H N N 106 GLN N N N N 107 GLN CA C N S 108 GLN C C N N 109 GLN O O N N 110 GLN CB C N N 111 GLN CG C N N 112 GLN CD C N N 113 GLN OE1 O N N 114 GLN NE2 N N N 115 GLN OXT O N N 116 GLN H H N N 117 GLN H2 H N N 118 GLN HA H N N 119 GLN HB2 H N N 120 GLN HB3 H N N 121 GLN HG2 H N N 122 GLN HG3 H N N 123 GLN HE21 H N N 124 GLN HE22 H N N 125 GLN HXT H N N 126 GLU N N N N 127 GLU CA C N S 128 GLU C C N N 129 GLU O O N N 130 GLU CB C N N 131 GLU CG C N N 132 GLU CD C N N 133 GLU OE1 O N N 134 GLU OE2 O N N 135 GLU OXT O N N 136 GLU H H N N 137 GLU H2 H N N 138 GLU HA H N N 139 GLU HB2 H N N 140 GLU HB3 H N N 141 GLU HG2 H N N 142 GLU HG3 H N N 143 GLU HE2 H N N 144 GLU HXT H N N 145 GLY N N N N 146 GLY CA C N N 147 GLY C C N N 148 GLY O O N N 149 GLY OXT O N N 150 GLY H H N N 151 GLY H2 H N N 152 GLY HA2 H N N 153 GLY HA3 H N N 154 GLY HXT H N N 155 GOL C1 C N N 156 GOL O1 O N N 157 GOL C2 C N N 158 GOL O2 O N N 159 GOL C3 C N N 160 GOL O3 O N N 161 GOL H11 H N N 162 GOL H12 H N N 163 GOL HO1 H N N 164 GOL H2 H N N 165 GOL HO2 H N N 166 GOL H31 H N N 167 GOL H32 H N N 168 GOL HO3 H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 VAL N N N N 354 VAL CA C N S 355 VAL C C N N 356 VAL O O N N 357 VAL CB C N N 358 VAL CG1 C N N 359 VAL CG2 C N N 360 VAL OXT O N N 361 VAL H H N N 362 VAL H2 H N N 363 VAL HA H N N 364 VAL HB H N N 365 VAL HG11 H N N 366 VAL HG12 H N N 367 VAL HG13 H N N 368 VAL HG21 H N N 369 VAL HG22 H N N 370 VAL HG23 H N N 371 VAL HXT H N N 372 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 EPE N1 C2 sing N N 70 EPE N1 C6 sing N N 71 EPE N1 C9 sing N N 72 EPE C2 C3 sing N N 73 EPE C2 H21 sing N N 74 EPE C2 H22 sing N N 75 EPE C3 N4 sing N N 76 EPE C3 H31 sing N N 77 EPE C3 H32 sing N N 78 EPE N4 C5 sing N N 79 EPE N4 C7 sing N N 80 EPE C5 C6 sing N N 81 EPE C5 H51 sing N N 82 EPE C5 H52 sing N N 83 EPE C6 H61 sing N N 84 EPE C6 H62 sing N N 85 EPE C7 C8 sing N N 86 EPE C7 H71 sing N N 87 EPE C7 H72 sing N N 88 EPE C8 O8 sing N N 89 EPE C8 H81 sing N N 90 EPE C8 H82 sing N N 91 EPE O8 HO8 sing N N 92 EPE C9 C10 sing N N 93 EPE C9 H91 sing N N 94 EPE C9 H92 sing N N 95 EPE C10 S sing N N 96 EPE C10 H101 sing N N 97 EPE C10 H102 sing N N 98 EPE S O1S doub N N 99 EPE S O2S doub N N 100 EPE S O3S sing N N 101 EPE O3S HOS3 sing N N 102 GLN N CA sing N N 103 GLN N H sing N N 104 GLN N H2 sing N N 105 GLN CA C sing N N 106 GLN CA CB sing N N 107 GLN CA HA sing N N 108 GLN C O doub N N 109 GLN C OXT sing N N 110 GLN CB CG sing N N 111 GLN CB HB2 sing N N 112 GLN CB HB3 sing N N 113 GLN CG CD sing N N 114 GLN CG HG2 sing N N 115 GLN CG HG3 sing N N 116 GLN CD OE1 doub N N 117 GLN CD NE2 sing N N 118 GLN NE2 HE21 sing N N 119 GLN NE2 HE22 sing N N 120 GLN OXT HXT sing N N 121 GLU N CA sing N N 122 GLU N H sing N N 123 GLU N H2 sing N N 124 GLU CA C sing N N 125 GLU CA CB sing N N 126 GLU CA HA sing N N 127 GLU C O doub N N 128 GLU C OXT sing N N 129 GLU CB CG sing N N 130 GLU CB HB2 sing N N 131 GLU CB HB3 sing N N 132 GLU CG CD sing N N 133 GLU CG HG2 sing N N 134 GLU CG HG3 sing N N 135 GLU CD OE1 doub N N 136 GLU CD OE2 sing N N 137 GLU OE2 HE2 sing N N 138 GLU OXT HXT sing N N 139 GLY N CA sing N N 140 GLY N H sing N N 141 GLY N H2 sing N N 142 GLY CA C sing N N 143 GLY CA HA2 sing N N 144 GLY CA HA3 sing N N 145 GLY C O doub N N 146 GLY C OXT sing N N 147 GLY OXT HXT sing N N 148 GOL C1 O1 sing N N 149 GOL C1 C2 sing N N 150 GOL C1 H11 sing N N 151 GOL C1 H12 sing N N 152 GOL O1 HO1 sing N N 153 GOL C2 O2 sing N N 154 GOL C2 C3 sing N N 155 GOL C2 H2 sing N N 156 GOL O2 HO2 sing N N 157 GOL C3 O3 sing N N 158 GOL C3 H31 sing N N 159 GOL C3 H32 sing N N 160 GOL O3 HO3 sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 VAL N CA sing N N 339 VAL N H sing N N 340 VAL N H2 sing N N 341 VAL CA C sing N N 342 VAL CA CB sing N N 343 VAL CA HA sing N N 344 VAL C O doub N N 345 VAL C OXT sing N N 346 VAL CB CG1 sing N N 347 VAL CB CG2 sing N N 348 VAL CB HB sing N N 349 VAL CG1 HG11 sing N N 350 VAL CG1 HG12 sing N N 351 VAL CG1 HG13 sing N N 352 VAL CG2 HG21 sing N N 353 VAL CG2 HG22 sing N N 354 VAL CG2 HG23 sing N N 355 VAL OXT HXT sing N N 356 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1I2T _pdbx_initial_refinement_model.details 'pdb entry 1I2T' #