data_3KY8 # _entry.id 3KY8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3KY8 pdb_00003ky8 10.2210/pdb3ky8/pdb RCSB RCSB056596 ? ? WWPDB D_1000056596 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394242 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3KY8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-12-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Putative riboflavin biosynthesis protein (YP_001092907.1) from SHEWANELLA SP. PV-4 at 2.12 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3KY8 _cell.length_a 72.679 _cell.length_b 72.679 _cell.length_c 156.974 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KY8 _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative riboflavin biosynthesis protein' 22497.621 2 ? ? ? ? 2 non-polymer syn 'UNKNOWN LIGAND' ? 4 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 5 water nat water 18.015 197 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bifunctional deaminase-reductase domain protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)ANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVAL(MSE)ERVDGLV (MSE)GRNTLD(MSE)VLSFDCDWPYSKPVFVLSNT(MSE)TEVPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGV TIQNFLKEDLIDE(MSE)VITRFPILLGGGVPLFGELESSLSFNVIKSEVVLDSLTQTTYHRKRA ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMERVDGLVMGRNTLDMVLSF DCDWPYSKPVFVLSNTMTEVPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGVTIQNFLKEDLIDEMVITRFPILLG GGVPLFGELESSLSFNVIKSEVVLDSLTQTTYHRKRA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 394242 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 ALA n 1 22 ASN n 1 23 ILE n 1 24 VAL n 1 25 PHE n 1 26 ILE n 1 27 ALA n 1 28 THR n 1 29 SER n 1 30 LEU n 1 31 ASP n 1 32 GLY n 1 33 TYR n 1 34 ILE n 1 35 ALA n 1 36 ASP n 1 37 LYS n 1 38 ARG n 1 39 GLY n 1 40 LYS n 1 41 LEU n 1 42 ASP n 1 43 TRP n 1 44 LEU n 1 45 HIS n 1 46 SER n 1 47 VAL n 1 48 PRO n 1 49 ASN n 1 50 PRO n 1 51 ASN n 1 52 ASN n 1 53 VAL n 1 54 ASP n 1 55 THR n 1 56 GLY n 1 57 PHE n 1 58 VAL n 1 59 ALA n 1 60 LEU n 1 61 MSE n 1 62 GLU n 1 63 ARG n 1 64 VAL n 1 65 ASP n 1 66 GLY n 1 67 LEU n 1 68 VAL n 1 69 MSE n 1 70 GLY n 1 71 ARG n 1 72 ASN n 1 73 THR n 1 74 LEU n 1 75 ASP n 1 76 MSE n 1 77 VAL n 1 78 LEU n 1 79 SER n 1 80 PHE n 1 81 ASP n 1 82 CYS n 1 83 ASP n 1 84 TRP n 1 85 PRO n 1 86 TYR n 1 87 SER n 1 88 LYS n 1 89 PRO n 1 90 VAL n 1 91 PHE n 1 92 VAL n 1 93 LEU n 1 94 SER n 1 95 ASN n 1 96 THR n 1 97 MSE n 1 98 THR n 1 99 GLU n 1 100 VAL n 1 101 PRO n 1 102 GLN n 1 103 GLY n 1 104 TYR n 1 105 GLU n 1 106 ASP n 1 107 LYS n 1 108 VAL n 1 109 PHE n 1 110 LEU n 1 111 VAL n 1 112 LYS n 1 113 GLY n 1 114 LYS n 1 115 LEU n 1 116 VAL n 1 117 ASP n 1 118 ILE n 1 119 ILE n 1 120 ALA n 1 121 ASP n 1 122 LEU n 1 123 ASN n 1 124 ALA n 1 125 LYS n 1 126 GLY n 1 127 PHE n 1 128 ASN n 1 129 GLU n 1 130 LEU n 1 131 TYR n 1 132 ILE n 1 133 ASP n 1 134 GLY n 1 135 GLY n 1 136 VAL n 1 137 THR n 1 138 ILE n 1 139 GLN n 1 140 ASN n 1 141 PHE n 1 142 LEU n 1 143 LYS n 1 144 GLU n 1 145 ASP n 1 146 LEU n 1 147 ILE n 1 148 ASP n 1 149 GLU n 1 150 MSE n 1 151 VAL n 1 152 ILE n 1 153 THR n 1 154 ARG n 1 155 PHE n 1 156 PRO n 1 157 ILE n 1 158 LEU n 1 159 LEU n 1 160 GLY n 1 161 GLY n 1 162 GLY n 1 163 VAL n 1 164 PRO n 1 165 LEU n 1 166 PHE n 1 167 GLY n 1 168 GLU n 1 169 LEU n 1 170 GLU n 1 171 SER n 1 172 SER n 1 173 LEU n 1 174 SER n 1 175 PHE n 1 176 ASN n 1 177 VAL n 1 178 ILE n 1 179 LYS n 1 180 SER n 1 181 GLU n 1 182 VAL n 1 183 VAL n 1 184 LEU n 1 185 ASP n 1 186 SER n 1 187 LEU n 1 188 THR n 1 189 GLN n 1 190 THR n 1 191 THR n 1 192 TYR n 1 193 HIS n 1 194 ARG n 1 195 LYS n 1 196 ARG n 1 197 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Shew_0776 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-1088 / PV-4' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella loihica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 323850 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A3QB00_SHELP _struct_ref.pdbx_db_accession A3QB00 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMERVDGLVMGRNTLDMVLSFDCDWPYSKPVFVLSNTMTE VPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGVTIQNFLKEDLIDEMVITRFPILLGGGVPLFGELESSLSFNVIK SEVVLDSLTQTTYHRKRA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3KY8 A 20 ? 197 ? A3QB00 1 ? 178 ? 1 178 2 1 3KY8 B 20 ? 197 ? A3QB00 1 ? 178 ? 1 178 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KY8 MSE A 1 ? UNP A3QB00 ? ? 'expression tag' -18 1 1 3KY8 GLY A 2 ? UNP A3QB00 ? ? 'expression tag' -17 2 1 3KY8 SER A 3 ? UNP A3QB00 ? ? 'expression tag' -16 3 1 3KY8 ASP A 4 ? UNP A3QB00 ? ? 'expression tag' -15 4 1 3KY8 LYS A 5 ? UNP A3QB00 ? ? 'expression tag' -14 5 1 3KY8 ILE A 6 ? UNP A3QB00 ? ? 'expression tag' -13 6 1 3KY8 HIS A 7 ? UNP A3QB00 ? ? 'expression tag' -12 7 1 3KY8 HIS A 8 ? UNP A3QB00 ? ? 'expression tag' -11 8 1 3KY8 HIS A 9 ? UNP A3QB00 ? ? 'expression tag' -10 9 1 3KY8 HIS A 10 ? UNP A3QB00 ? ? 'expression tag' -9 10 1 3KY8 HIS A 11 ? UNP A3QB00 ? ? 'expression tag' -8 11 1 3KY8 HIS A 12 ? UNP A3QB00 ? ? 'expression tag' -7 12 1 3KY8 GLU A 13 ? UNP A3QB00 ? ? 'expression tag' -6 13 1 3KY8 ASN A 14 ? UNP A3QB00 ? ? 'expression tag' -5 14 1 3KY8 LEU A 15 ? UNP A3QB00 ? ? 'expression tag' -4 15 1 3KY8 TYR A 16 ? UNP A3QB00 ? ? 'expression tag' -3 16 1 3KY8 PHE A 17 ? UNP A3QB00 ? ? 'expression tag' -2 17 1 3KY8 GLN A 18 ? UNP A3QB00 ? ? 'expression tag' -1 18 1 3KY8 GLY A 19 ? UNP A3QB00 ? ? 'expression tag' 0 19 2 3KY8 MSE B 1 ? UNP A3QB00 ? ? 'expression tag' -18 20 2 3KY8 GLY B 2 ? UNP A3QB00 ? ? 'expression tag' -17 21 2 3KY8 SER B 3 ? UNP A3QB00 ? ? 'expression tag' -16 22 2 3KY8 ASP B 4 ? UNP A3QB00 ? ? 'expression tag' -15 23 2 3KY8 LYS B 5 ? UNP A3QB00 ? ? 'expression tag' -14 24 2 3KY8 ILE B 6 ? UNP A3QB00 ? ? 'expression tag' -13 25 2 3KY8 HIS B 7 ? UNP A3QB00 ? ? 'expression tag' -12 26 2 3KY8 HIS B 8 ? UNP A3QB00 ? ? 'expression tag' -11 27 2 3KY8 HIS B 9 ? UNP A3QB00 ? ? 'expression tag' -10 28 2 3KY8 HIS B 10 ? UNP A3QB00 ? ? 'expression tag' -9 29 2 3KY8 HIS B 11 ? UNP A3QB00 ? ? 'expression tag' -8 30 2 3KY8 HIS B 12 ? UNP A3QB00 ? ? 'expression tag' -7 31 2 3KY8 GLU B 13 ? UNP A3QB00 ? ? 'expression tag' -6 32 2 3KY8 ASN B 14 ? UNP A3QB00 ? ? 'expression tag' -5 33 2 3KY8 LEU B 15 ? UNP A3QB00 ? ? 'expression tag' -4 34 2 3KY8 TYR B 16 ? UNP A3QB00 ? ? 'expression tag' -3 35 2 3KY8 PHE B 17 ? UNP A3QB00 ? ? 'expression tag' -2 36 2 3KY8 GLN B 18 ? UNP A3QB00 ? ? 'expression tag' -1 37 2 3KY8 GLY B 19 ? UNP A3QB00 ? ? 'expression tag' 0 38 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3KY8 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.5000M (NH4)2SO4, 1.0000M Li2SO4, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-07-09 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97917 1.0 3 0.97870 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97917,0.97870 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3KY8 _reflns.d_resolution_high 2.12 _reflns.d_resolution_low 30.029 _reflns.number_obs 24676 _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_netI_over_sigmaI 11.700 _reflns.percent_possible_obs 99.600 _reflns.B_iso_Wilson_estimate 35.549 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.12 2.20 17588 ? 4765 0.948 1.5 ? ? ? ? ? 99.20 1 1 2.20 2.28 15836 ? 4140 0.769 2.0 ? ? ? ? ? 99.30 2 1 2.28 2.39 18413 ? 4788 0.634 2.4 ? ? ? ? ? 99.50 3 1 2.39 2.51 16865 ? 4373 0.465 3.2 ? ? ? ? ? 99.90 4 1 2.51 2.67 17749 ? 4589 0.362 4.1 ? ? ? ? ? 99.70 5 1 2.67 2.88 17926 ? 4640 0.228 6.2 ? ? ? ? ? 99.80 6 1 2.88 3.16 17126 ? 4421 0.131 10.3 ? ? ? ? ? 99.80 7 1 3.16 3.62 17829 ? 4595 0.069 18.3 ? ? ? ? ? 99.90 8 1 3.62 4.55 17713 ? 4559 0.037 30.4 ? ? ? ? ? 99.90 9 1 4.55 30.029 17902 ? 4615 0.029 37.9 ? ? ? ? ? 99.40 10 1 # _refine.entry_id 3KY8 _refine.ls_d_res_high 2.120 _refine.ls_d_res_low 30.029 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.690 _refine.ls_number_reflns_obs 24610 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. SULFATE (SO4) IONS AND GLYCEROL (GOL) MOLECULES ARE MODELED BASED ON CRYSTALLIZATION CONDITION. 5. UNIDENTIFIED LIGANDS (UNL) HAVE BEEN MODELED IN ELECTRON DENSITY FOUND NEAR THE PUTATIVE ACTIVE SITES. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_R_work 0.181 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.231 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1256 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 37.954 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.430 _refine.aniso_B[2][2] 1.430 _refine.aniso_B[3][3] -2.860 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.210 _refine.pdbx_overall_ESU_R_Free 0.182 _refine.overall_SU_ML 0.139 _refine.overall_SU_B 10.193 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 90.03 _refine.B_iso_min 15.68 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2811 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 76 _refine_hist.number_atoms_solvent 197 _refine_hist.number_atoms_total 3084 _refine_hist.d_res_high 2.120 _refine_hist.d_res_low 30.029 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2940 0.016 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1921 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3994 1.590 1.982 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4720 0.961 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 367 6.427 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 128 39.495 25.312 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 493 14.800 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 10 11.108 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 458 0.094 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 3244 0.006 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 570 0.001 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 473 0.250 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1947 0.199 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1408 0.178 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1581 0.088 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 141 0.153 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 31 0.211 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 65 0.229 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 13 0.209 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1877 1.983 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 743 0.675 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2943 2.865 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1218 4.916 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 1051 6.566 11.000 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' A 2202 0.720 0.500 1 ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' A 2202 1.300 2.000 2 ? ? ? # _refine_ls_shell.d_res_high 2.120 _refine_ls_shell.d_res_low 2.175 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.490 _refine_ls_shell.number_reflns_R_work 1686 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.R_factor_R_free 0.317 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1768 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id 1 1 1 4 A 1 A 176 ? . . . . . . . . 1 2 1 4 B 1 B 176 ? . . . . . . . . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3KY8 _struct.title 'Crystal structure of Putative riboflavin biosynthesis protein (YP_001092907.1) from SHEWANELLA SP. PV-4 at 2.12 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Putative riboflavin biosynthesis protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, BIOSYNTHETIC PROTEIN ; _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' _struct_keywords.entry_id 3KY8 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details ;CRYSTAL PACKING AND ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY COUPLED WITH STATIC LIGHT SCATTERING SUPPORT THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 41 ? VAL A 47 ? LEU A 22 VAL A 28 5 ? 7 HELX_P HELX_P2 2 GLY A 56 ? VAL A 64 ? GLY A 37 VAL A 45 1 ? 9 HELX_P HELX_P3 3 ARG A 71 ? LEU A 78 ? ARG A 52 LEU A 59 1 ? 8 HELX_P HELX_P4 4 LYS A 114 ? LYS A 125 ? LYS A 95 LYS A 106 1 ? 12 HELX_P HELX_P5 5 GLY A 134 ? GLU A 144 ? GLY A 115 GLU A 125 1 ? 11 HELX_P HELX_P6 6 LEU B 41 ? VAL B 47 ? LEU B 22 VAL B 28 5 ? 7 HELX_P HELX_P7 7 GLY B 56 ? VAL B 64 ? GLY B 37 VAL B 45 1 ? 9 HELX_P HELX_P8 8 GLY B 70 ? PHE B 80 ? GLY B 51 PHE B 61 1 ? 11 HELX_P HELX_P9 9 LYS B 114 ? LYS B 125 ? LYS B 95 LYS B 106 1 ? 12 HELX_P HELX_P10 10 GLY B 134 ? GLU B 144 ? GLY B 115 GLU B 125 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 20 C ? ? ? 1_555 A ALA 21 N ? ? A MSE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 61 C ? ? ? 1_555 A GLU 62 N ? ? A MSE 42 A GLU 43 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A MSE 69 C ? ? ? 1_555 A GLY 70 N ? ? A MSE 50 A GLY 51 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A MSE 76 C ? ? ? 1_555 A VAL 77 N ? ? A MSE 57 A VAL 58 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? A MSE 97 C ? ? ? 1_555 A THR 98 N ? ? A MSE 78 A THR 79 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? A MSE 150 C ? ? ? 1_555 A VAL 151 N ? ? A MSE 131 A VAL 132 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? B MSE 20 C ? ? ? 1_555 B ALA 21 N ? ? B MSE 1 B ALA 2 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? B MSE 61 C ? ? ? 1_555 B GLU 62 N ? ? B MSE 42 B GLU 43 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale9 covale both ? B MSE 69 C ? ? ? 1_555 B GLY 70 N ? ? B MSE 50 B GLY 51 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale10 covale both ? B MSE 76 C A ? ? 1_555 B VAL 77 N ? ? B MSE 57 B VAL 58 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale11 covale both ? B MSE 76 C B ? ? 1_555 B VAL 77 N ? ? B MSE 57 B VAL 58 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? B MSE 97 C ? ? ? 1_555 B THR 98 N ? ? B MSE 78 B THR 79 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale13 covale both ? B MSE 150 C ? ? ? 1_555 B VAL 151 N ? ? B MSE 131 B VAL 132 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 2 ? C ? 9 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? parallel C 6 7 ? parallel C 7 8 ? parallel C 8 9 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 108 ? VAL A 111 ? VAL A 89 VAL A 92 A 2 VAL A 90 ? LEU A 93 ? VAL A 71 LEU A 74 A 3 GLY A 66 ? GLY A 70 ? GLY A 47 GLY A 51 A 4 GLU A 129 ? ASP A 133 ? GLU A 110 ASP A 114 A 5 ALA A 21 ? SER A 29 ? ALA A 2 SER A 10 A 6 GLU A 149 ? PHE A 155 ? GLU A 130 PHE A 136 A 7 LEU A 187 ? ARG A 194 ? LEU A 168 ARG A 175 A 8 LEU A 173 ? VAL A 183 ? LEU A 154 VAL A 164 A 9 ILE B 157 ? LEU B 158 ? ILE B 138 LEU B 139 B 1 TYR A 33 ? ALA A 35 ? TYR A 14 ALA A 16 B 2 VAL A 163 ? PRO A 164 ? VAL A 144 PRO A 145 C 1 ILE A 157 ? LEU A 158 ? ILE A 138 LEU A 139 C 2 LEU B 173 ? VAL B 183 ? LEU B 154 VAL B 164 C 3 LEU B 187 ? ARG B 194 ? LEU B 168 ARG B 175 C 4 GLU B 149 ? ARG B 154 ? GLU B 130 ARG B 135 C 5 ALA B 21 ? THR B 28 ? ALA B 2 THR B 9 C 6 GLU B 129 ? ILE B 132 ? GLU B 110 ILE B 113 C 7 GLY B 66 ? MSE B 69 ? GLY B 47 MSE B 50 C 8 VAL B 90 ? LEU B 93 ? VAL B 71 LEU B 74 C 9 VAL B 108 ? VAL B 111 ? VAL B 89 VAL B 92 D 1 TYR B 33 ? ALA B 35 ? TYR B 14 ALA B 16 D 2 VAL B 163 ? PRO B 164 ? VAL B 144 PRO B 145 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 109 ? O PHE A 90 N VAL A 90 ? N VAL A 71 A 2 3 O PHE A 91 ? O PHE A 72 N LEU A 67 ? N LEU A 48 A 3 4 N VAL A 68 ? N VAL A 49 O ASP A 133 ? O ASP A 114 A 4 5 O LEU A 130 ? O LEU A 111 N ILE A 23 ? N ILE A 4 A 5 6 N THR A 28 ? N THR A 9 O PHE A 155 ? O PHE A 136 A 6 7 N MSE A 150 ? N MSE A 131 O TYR A 192 ? O TYR A 173 A 7 8 O HIS A 193 ? O HIS A 174 N ASN A 176 ? N ASN A 157 A 8 9 N LEU A 173 ? N LEU A 154 O LEU B 158 ? O LEU B 139 B 1 2 N ILE A 34 ? N ILE A 15 O VAL A 163 ? O VAL A 144 C 1 2 N LEU A 158 ? N LEU A 139 O LEU B 173 ? O LEU B 154 C 2 3 N GLU B 181 ? N GLU B 162 O GLN B 189 ? O GLN B 170 C 3 4 O TYR B 192 ? O TYR B 173 N MSE B 150 ? N MSE B 131 C 4 5 O VAL B 151 ? O VAL B 132 N VAL B 24 ? N VAL B 5 C 5 6 N ILE B 23 ? N ILE B 4 O LEU B 130 ? O LEU B 111 C 6 7 O TYR B 131 ? O TYR B 112 N VAL B 68 ? N VAL B 49 C 7 8 N LEU B 67 ? N LEU B 48 O PHE B 91 ? O PHE B 72 C 8 9 N VAL B 92 ? N VAL B 73 O PHE B 109 ? O PHE B 90 D 1 2 N ILE B 34 ? N ILE B 15 O VAL B 163 ? O VAL B 144 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 181 ? 9 'BINDING SITE FOR RESIDUE SO4 A 181' AC2 Software A GOL 182 ? 5 'BINDING SITE FOR RESIDUE GOL A 182' AC3 Software A GOL 183 ? 6 'BINDING SITE FOR RESIDUE GOL A 183' AC4 Software B SO4 181 ? 5 'BINDING SITE FOR RESIDUE SO4 B 181' AC5 Software B SO4 182 ? 9 'BINDING SITE FOR RESIDUE SO4 B 182' AC6 Software B SO4 183 ? 9 'BINDING SITE FOR RESIDUE SO4 B 183' AC7 Software B GOL 184 ? 7 'BINDING SITE FOR RESIDUE GOL B 184' AC8 Software B GOL 185 ? 6 'BINDING SITE FOR RESIDUE GOL B 185' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLY A 70 ? GLY A 51 . ? 1_555 ? 2 AC1 9 ARG A 71 ? ARG A 52 . ? 1_555 ? 3 AC1 9 ASN A 72 ? ASN A 53 . ? 1_555 ? 4 AC1 9 THR A 73 ? THR A 54 . ? 1_555 ? 5 AC1 9 GLY A 134 ? GLY A 115 . ? 1_555 ? 6 AC1 9 GLY A 135 ? GLY A 116 . ? 1_555 ? 7 AC1 9 VAL A 136 ? VAL A 117 . ? 1_555 ? 8 AC1 9 THR A 137 ? THR A 118 . ? 1_555 ? 9 AC1 9 HOH O . ? HOH A 287 . ? 1_555 ? 10 AC2 5 SER A 172 ? SER A 153 . ? 1_555 ? 11 AC2 5 LEU A 173 ? LEU A 154 . ? 1_555 ? 12 AC2 5 SER A 174 ? SER A 155 . ? 1_555 ? 13 AC2 5 ARG A 194 ? ARG A 175 . ? 1_555 ? 14 AC2 5 HOH O . ? HOH A 254 . ? 1_555 ? 15 AC3 6 MSE A 61 ? MSE A 42 . ? 1_555 ? 16 AC3 6 PRO A 85 ? PRO A 66 . ? 1_555 ? 17 AC3 6 TYR A 86 ? TYR A 67 . ? 1_555 ? 18 AC3 6 SER A 87 ? SER A 68 . ? 1_555 ? 19 AC3 6 HOH O . ? HOH A 250 . ? 1_555 ? 20 AC3 6 HOH O . ? HOH A 281 . ? 1_555 ? 21 AC4 5 SER A 171 ? SER A 152 . ? 1_555 ? 22 AC4 5 SER A 172 ? SER A 153 . ? 1_555 ? 23 AC4 5 LYS B 37 ? LYS B 18 . ? 1_555 ? 24 AC4 5 ARG B 38 ? ARG B 19 . ? 1_555 ? 25 AC4 5 HOH P . ? HOH B 234 . ? 1_555 ? 26 AC5 9 GLY B 70 ? GLY B 51 . ? 1_555 ? 27 AC5 9 ARG B 71 ? ARG B 52 . ? 1_555 ? 28 AC5 9 ASN B 72 ? ASN B 53 . ? 1_555 ? 29 AC5 9 THR B 73 ? THR B 54 . ? 1_555 ? 30 AC5 9 GLY B 134 ? GLY B 115 . ? 1_555 ? 31 AC5 9 GLY B 135 ? GLY B 116 . ? 1_555 ? 32 AC5 9 VAL B 136 ? VAL B 117 . ? 1_555 ? 33 AC5 9 THR B 137 ? THR B 118 . ? 1_555 ? 34 AC5 9 HOH P . ? HOH B 198 . ? 1_555 ? 35 AC6 9 PRO A 89 ? PRO A 70 . ? 5_545 ? 36 AC6 9 PHE A 127 ? PHE A 108 . ? 5_545 ? 37 AC6 9 HOH O . ? HOH A 207 . ? 5_545 ? 38 AC6 9 HOH O . ? HOH A 223 . ? 5_545 ? 39 AC6 9 ARG B 71 ? ARG B 52 . ? 1_555 ? 40 AC6 9 SER B 94 ? SER B 75 . ? 1_555 ? 41 AC6 9 ASN B 95 ? ASN B 76 . ? 1_555 ? 42 AC6 9 THR B 96 ? THR B 77 . ? 1_555 ? 43 AC6 9 HOH P . ? HOH B 188 . ? 1_555 ? 44 AC7 7 SER B 172 ? SER B 153 . ? 1_555 ? 45 AC7 7 SER B 174 ? SER B 155 . ? 1_555 ? 46 AC7 7 ARG B 194 ? ARG B 175 . ? 1_555 ? 47 AC7 7 LYS B 195 ? LYS B 176 . ? 1_555 ? 48 AC7 7 ARG B 196 ? ARG B 177 . ? 1_555 ? 49 AC7 7 HOH P . ? HOH B 256 . ? 1_555 ? 50 AC7 7 HOH P . ? HOH B 274 . ? 1_555 ? 51 AC8 6 ASP B 145 ? ASP B 126 . ? 1_555 ? 52 AC8 6 ILE B 147 ? ILE B 128 . ? 1_555 ? 53 AC8 6 ASP B 148 ? ASP B 129 . ? 1_555 ? 54 AC8 6 ARG B 194 ? ARG B 175 . ? 1_555 ? 55 AC8 6 LYS B 195 ? LYS B 176 . ? 1_555 ? 56 AC8 6 ARG B 196 ? ARG B 177 . ? 1_555 ? # _atom_sites.entry_id 3KY8 _atom_sites.fract_transf_matrix[1][1] 0.013759 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013759 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006370 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 -6 GLU GLU A . n A 1 14 ASN 14 -5 -5 ASN ASN A . n A 1 15 LEU 15 -4 -4 LEU LEU A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 ALA 21 2 2 ALA ALA A . n A 1 22 ASN 22 3 3 ASN ASN A . n A 1 23 ILE 23 4 4 ILE ILE A . n A 1 24 VAL 24 5 5 VAL VAL A . n A 1 25 PHE 25 6 6 PHE PHE A . n A 1 26 ILE 26 7 7 ILE ILE A . n A 1 27 ALA 27 8 8 ALA ALA A . n A 1 28 THR 28 9 9 THR THR A . n A 1 29 SER 29 10 10 SER SER A . n A 1 30 LEU 30 11 11 LEU LEU A . n A 1 31 ASP 31 12 12 ASP ASP A . n A 1 32 GLY 32 13 13 GLY GLY A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 ILE 34 15 15 ILE ILE A . n A 1 35 ALA 35 16 16 ALA ALA A . n A 1 36 ASP 36 17 17 ASP ASP A . n A 1 37 LYS 37 18 18 LYS LYS A . n A 1 38 ARG 38 19 19 ARG ARG A . n A 1 39 GLY 39 20 20 GLY GLY A . n A 1 40 LYS 40 21 21 LYS LYS A . n A 1 41 LEU 41 22 22 LEU LEU A . n A 1 42 ASP 42 23 23 ASP ASP A . n A 1 43 TRP 43 24 24 TRP TRP A . n A 1 44 LEU 44 25 25 LEU LEU A . n A 1 45 HIS 45 26 26 HIS HIS A . n A 1 46 SER 46 27 27 SER SER A . n A 1 47 VAL 47 28 28 VAL VAL A . n A 1 48 PRO 48 29 29 PRO PRO A . n A 1 49 ASN 49 30 30 ASN ASN A . n A 1 50 PRO 50 31 31 PRO PRO A . n A 1 51 ASN 51 32 32 ASN ASN A . n A 1 52 ASN 52 33 33 ASN ASN A . n A 1 53 VAL 53 34 34 VAL VAL A . n A 1 54 ASP 54 35 35 ASP ASP A . n A 1 55 THR 55 36 36 THR THR A . n A 1 56 GLY 56 37 37 GLY GLY A . n A 1 57 PHE 57 38 38 PHE PHE A . n A 1 58 VAL 58 39 39 VAL VAL A . n A 1 59 ALA 59 40 40 ALA ALA A . n A 1 60 LEU 60 41 41 LEU LEU A . n A 1 61 MSE 61 42 42 MSE MSE A . n A 1 62 GLU 62 43 43 GLU GLU A . n A 1 63 ARG 63 44 44 ARG ARG A . n A 1 64 VAL 64 45 45 VAL VAL A . n A 1 65 ASP 65 46 46 ASP ASP A . n A 1 66 GLY 66 47 47 GLY GLY A . n A 1 67 LEU 67 48 48 LEU LEU A . n A 1 68 VAL 68 49 49 VAL VAL A . n A 1 69 MSE 69 50 50 MSE MSE A . n A 1 70 GLY 70 51 51 GLY GLY A . n A 1 71 ARG 71 52 52 ARG ARG A . n A 1 72 ASN 72 53 53 ASN ASN A . n A 1 73 THR 73 54 54 THR THR A . n A 1 74 LEU 74 55 55 LEU LEU A . n A 1 75 ASP 75 56 56 ASP ASP A . n A 1 76 MSE 76 57 57 MSE MSE A . n A 1 77 VAL 77 58 58 VAL VAL A . n A 1 78 LEU 78 59 59 LEU LEU A . n A 1 79 SER 79 60 60 SER SER A . n A 1 80 PHE 80 61 61 PHE PHE A . n A 1 81 ASP 81 62 62 ASP ASP A . n A 1 82 CYS 82 63 63 CYS CYS A . n A 1 83 ASP 83 64 64 ASP ASP A . n A 1 84 TRP 84 65 65 TRP TRP A . n A 1 85 PRO 85 66 66 PRO PRO A . n A 1 86 TYR 86 67 67 TYR TYR A . n A 1 87 SER 87 68 68 SER SER A . n A 1 88 LYS 88 69 69 LYS LYS A . n A 1 89 PRO 89 70 70 PRO PRO A . n A 1 90 VAL 90 71 71 VAL VAL A . n A 1 91 PHE 91 72 72 PHE PHE A . n A 1 92 VAL 92 73 73 VAL VAL A . n A 1 93 LEU 93 74 74 LEU LEU A . n A 1 94 SER 94 75 75 SER SER A . n A 1 95 ASN 95 76 76 ASN ASN A . n A 1 96 THR 96 77 77 THR THR A . n A 1 97 MSE 97 78 78 MSE MSE A . n A 1 98 THR 98 79 79 THR THR A . n A 1 99 GLU 99 80 80 GLU GLU A . n A 1 100 VAL 100 81 81 VAL VAL A . n A 1 101 PRO 101 82 82 PRO PRO A . n A 1 102 GLN 102 83 83 GLN GLN A . n A 1 103 GLY 103 84 84 GLY GLY A . n A 1 104 TYR 104 85 85 TYR TYR A . n A 1 105 GLU 105 86 86 GLU GLU A . n A 1 106 ASP 106 87 87 ASP ASP A . n A 1 107 LYS 107 88 88 LYS LYS A . n A 1 108 VAL 108 89 89 VAL VAL A . n A 1 109 PHE 109 90 90 PHE PHE A . n A 1 110 LEU 110 91 91 LEU LEU A . n A 1 111 VAL 111 92 92 VAL VAL A . n A 1 112 LYS 112 93 93 LYS LYS A . n A 1 113 GLY 113 94 94 GLY GLY A . n A 1 114 LYS 114 95 95 LYS LYS A . n A 1 115 LEU 115 96 96 LEU LEU A . n A 1 116 VAL 116 97 97 VAL VAL A . n A 1 117 ASP 117 98 98 ASP ASP A . n A 1 118 ILE 118 99 99 ILE ILE A . n A 1 119 ILE 119 100 100 ILE ILE A . n A 1 120 ALA 120 101 101 ALA ALA A . n A 1 121 ASP 121 102 102 ASP ASP A . n A 1 122 LEU 122 103 103 LEU LEU A . n A 1 123 ASN 123 104 104 ASN ASN A . n A 1 124 ALA 124 105 105 ALA ALA A . n A 1 125 LYS 125 106 106 LYS LYS A . n A 1 126 GLY 126 107 107 GLY GLY A . n A 1 127 PHE 127 108 108 PHE PHE A . n A 1 128 ASN 128 109 109 ASN ASN A . n A 1 129 GLU 129 110 110 GLU GLU A . n A 1 130 LEU 130 111 111 LEU LEU A . n A 1 131 TYR 131 112 112 TYR TYR A . n A 1 132 ILE 132 113 113 ILE ILE A . n A 1 133 ASP 133 114 114 ASP ASP A . n A 1 134 GLY 134 115 115 GLY GLY A . n A 1 135 GLY 135 116 116 GLY GLY A . n A 1 136 VAL 136 117 117 VAL VAL A . n A 1 137 THR 137 118 118 THR THR A . n A 1 138 ILE 138 119 119 ILE ILE A . n A 1 139 GLN 139 120 120 GLN GLN A . n A 1 140 ASN 140 121 121 ASN ASN A . n A 1 141 PHE 141 122 122 PHE PHE A . n A 1 142 LEU 142 123 123 LEU LEU A . n A 1 143 LYS 143 124 124 LYS LYS A . n A 1 144 GLU 144 125 125 GLU GLU A . n A 1 145 ASP 145 126 126 ASP ASP A . n A 1 146 LEU 146 127 127 LEU LEU A . n A 1 147 ILE 147 128 128 ILE ILE A . n A 1 148 ASP 148 129 129 ASP ASP A . n A 1 149 GLU 149 130 130 GLU GLU A . n A 1 150 MSE 150 131 131 MSE MSE A . n A 1 151 VAL 151 132 132 VAL VAL A . n A 1 152 ILE 152 133 133 ILE ILE A . n A 1 153 THR 153 134 134 THR THR A . n A 1 154 ARG 154 135 135 ARG ARG A . n A 1 155 PHE 155 136 136 PHE PHE A . n A 1 156 PRO 156 137 137 PRO PRO A . n A 1 157 ILE 157 138 138 ILE ILE A . n A 1 158 LEU 158 139 139 LEU LEU A . n A 1 159 LEU 159 140 140 LEU LEU A . n A 1 160 GLY 160 141 141 GLY GLY A . n A 1 161 GLY 161 142 142 GLY GLY A . n A 1 162 GLY 162 143 143 GLY GLY A . n A 1 163 VAL 163 144 144 VAL VAL A . n A 1 164 PRO 164 145 145 PRO PRO A . n A 1 165 LEU 165 146 146 LEU LEU A . n A 1 166 PHE 166 147 147 PHE PHE A . n A 1 167 GLY 167 148 148 GLY GLY A . n A 1 168 GLU 168 149 149 GLU GLU A . n A 1 169 LEU 169 150 150 LEU LEU A . n A 1 170 GLU 170 151 151 GLU GLU A . n A 1 171 SER 171 152 152 SER SER A . n A 1 172 SER 172 153 153 SER SER A . n A 1 173 LEU 173 154 154 LEU LEU A . n A 1 174 SER 174 155 155 SER SER A . n A 1 175 PHE 175 156 156 PHE PHE A . n A 1 176 ASN 176 157 157 ASN ASN A . n A 1 177 VAL 177 158 158 VAL VAL A . n A 1 178 ILE 178 159 159 ILE ILE A . n A 1 179 LYS 179 160 160 LYS LYS A . n A 1 180 SER 180 161 161 SER SER A . n A 1 181 GLU 181 162 162 GLU GLU A . n A 1 182 VAL 182 163 163 VAL VAL A . n A 1 183 VAL 183 164 164 VAL VAL A . n A 1 184 LEU 184 165 165 LEU LEU A . n A 1 185 ASP 185 166 166 ASP ASP A . n A 1 186 SER 186 167 167 SER SER A . n A 1 187 LEU 187 168 168 LEU LEU A . n A 1 188 THR 188 169 169 THR THR A . n A 1 189 GLN 189 170 170 GLN GLN A . n A 1 190 THR 190 171 171 THR THR A . n A 1 191 THR 191 172 172 THR THR A . n A 1 192 TYR 192 173 173 TYR TYR A . n A 1 193 HIS 193 174 174 HIS HIS A . n A 1 194 ARG 194 175 175 ARG ARG A . n A 1 195 LYS 195 176 176 LYS LYS A . n A 1 196 ARG 196 177 177 ARG ARG A . n A 1 197 ALA 197 178 ? ? ? A . n B 1 1 MSE 1 -18 ? ? ? B . n B 1 2 GLY 2 -17 ? ? ? B . n B 1 3 SER 3 -16 ? ? ? B . n B 1 4 ASP 4 -15 ? ? ? B . n B 1 5 LYS 5 -14 ? ? ? B . n B 1 6 ILE 6 -13 ? ? ? B . n B 1 7 HIS 7 -12 ? ? ? B . n B 1 8 HIS 8 -11 ? ? ? B . n B 1 9 HIS 9 -10 ? ? ? B . n B 1 10 HIS 10 -9 ? ? ? B . n B 1 11 HIS 11 -8 ? ? ? B . n B 1 12 HIS 12 -7 ? ? ? B . n B 1 13 GLU 13 -6 ? ? ? B . n B 1 14 ASN 14 -5 ? ? ? B . n B 1 15 LEU 15 -4 ? ? ? B . n B 1 16 TYR 16 -3 ? ? ? B . n B 1 17 PHE 17 -2 ? ? ? B . n B 1 18 GLN 18 -1 ? ? ? B . n B 1 19 GLY 19 0 ? ? ? B . n B 1 20 MSE 20 1 1 MSE MSE B . n B 1 21 ALA 21 2 2 ALA ALA B . n B 1 22 ASN 22 3 3 ASN ASN B . n B 1 23 ILE 23 4 4 ILE ILE B . n B 1 24 VAL 24 5 5 VAL VAL B . n B 1 25 PHE 25 6 6 PHE PHE B . n B 1 26 ILE 26 7 7 ILE ILE B . n B 1 27 ALA 27 8 8 ALA ALA B . n B 1 28 THR 28 9 9 THR THR B . n B 1 29 SER 29 10 10 SER SER B . n B 1 30 LEU 30 11 11 LEU LEU B . n B 1 31 ASP 31 12 12 ASP ASP B . n B 1 32 GLY 32 13 13 GLY GLY B . n B 1 33 TYR 33 14 14 TYR TYR B . n B 1 34 ILE 34 15 15 ILE ILE B . n B 1 35 ALA 35 16 16 ALA ALA B . n B 1 36 ASP 36 17 17 ASP ASP B . n B 1 37 LYS 37 18 18 LYS LYS B . n B 1 38 ARG 38 19 19 ARG ARG B . n B 1 39 GLY 39 20 20 GLY GLY B . n B 1 40 LYS 40 21 21 LYS LYS B . n B 1 41 LEU 41 22 22 LEU LEU B . n B 1 42 ASP 42 23 23 ASP ASP B . n B 1 43 TRP 43 24 24 TRP TRP B . n B 1 44 LEU 44 25 25 LEU LEU B . n B 1 45 HIS 45 26 26 HIS HIS B . n B 1 46 SER 46 27 27 SER SER B . n B 1 47 VAL 47 28 28 VAL VAL B . n B 1 48 PRO 48 29 29 PRO PRO B . n B 1 49 ASN 49 30 30 ASN ASN B . n B 1 50 PRO 50 31 31 PRO PRO B . n B 1 51 ASN 51 32 32 ASN ASN B . n B 1 52 ASN 52 33 33 ASN ASN B . n B 1 53 VAL 53 34 34 VAL VAL B . n B 1 54 ASP 54 35 35 ASP ASP B . n B 1 55 THR 55 36 36 THR THR B . n B 1 56 GLY 56 37 37 GLY GLY B . n B 1 57 PHE 57 38 38 PHE PHE B . n B 1 58 VAL 58 39 39 VAL VAL B . n B 1 59 ALA 59 40 40 ALA ALA B . n B 1 60 LEU 60 41 41 LEU LEU B . n B 1 61 MSE 61 42 42 MSE MSE B . n B 1 62 GLU 62 43 43 GLU GLU B . n B 1 63 ARG 63 44 44 ARG ARG B . n B 1 64 VAL 64 45 45 VAL VAL B . n B 1 65 ASP 65 46 46 ASP ASP B . n B 1 66 GLY 66 47 47 GLY GLY B . n B 1 67 LEU 67 48 48 LEU LEU B . n B 1 68 VAL 68 49 49 VAL VAL B . n B 1 69 MSE 69 50 50 MSE MSE B . n B 1 70 GLY 70 51 51 GLY GLY B . n B 1 71 ARG 71 52 52 ARG ARG B . n B 1 72 ASN 72 53 53 ASN ASN B . n B 1 73 THR 73 54 54 THR THR B . n B 1 74 LEU 74 55 55 LEU LEU B . n B 1 75 ASP 75 56 56 ASP ASP B . n B 1 76 MSE 76 57 57 MSE MSE B . n B 1 77 VAL 77 58 58 VAL VAL B . n B 1 78 LEU 78 59 59 LEU LEU B . n B 1 79 SER 79 60 60 SER SER B . n B 1 80 PHE 80 61 61 PHE PHE B . n B 1 81 ASP 81 62 62 ASP ASP B . n B 1 82 CYS 82 63 63 CYS CYS B . n B 1 83 ASP 83 64 64 ASP ASP B . n B 1 84 TRP 84 65 65 TRP TRP B . n B 1 85 PRO 85 66 66 PRO PRO B . n B 1 86 TYR 86 67 67 TYR TYR B . n B 1 87 SER 87 68 68 SER SER B . n B 1 88 LYS 88 69 69 LYS LYS B . n B 1 89 PRO 89 70 70 PRO PRO B . n B 1 90 VAL 90 71 71 VAL VAL B . n B 1 91 PHE 91 72 72 PHE PHE B . n B 1 92 VAL 92 73 73 VAL VAL B . n B 1 93 LEU 93 74 74 LEU LEU B . n B 1 94 SER 94 75 75 SER SER B . n B 1 95 ASN 95 76 76 ASN ASN B . n B 1 96 THR 96 77 77 THR THR B . n B 1 97 MSE 97 78 78 MSE MSE B . n B 1 98 THR 98 79 79 THR THR B . n B 1 99 GLU 99 80 80 GLU GLU B . n B 1 100 VAL 100 81 81 VAL VAL B . n B 1 101 PRO 101 82 82 PRO PRO B . n B 1 102 GLN 102 83 83 GLN GLN B . n B 1 103 GLY 103 84 84 GLY GLY B . n B 1 104 TYR 104 85 85 TYR TYR B . n B 1 105 GLU 105 86 86 GLU GLU B . n B 1 106 ASP 106 87 87 ASP ASP B . n B 1 107 LYS 107 88 88 LYS LYS B . n B 1 108 VAL 108 89 89 VAL VAL B . n B 1 109 PHE 109 90 90 PHE PHE B . n B 1 110 LEU 110 91 91 LEU LEU B . n B 1 111 VAL 111 92 92 VAL VAL B . n B 1 112 LYS 112 93 93 LYS LYS B . n B 1 113 GLY 113 94 94 GLY GLY B . n B 1 114 LYS 114 95 95 LYS LYS B . n B 1 115 LEU 115 96 96 LEU LEU B . n B 1 116 VAL 116 97 97 VAL VAL B . n B 1 117 ASP 117 98 98 ASP ASP B . n B 1 118 ILE 118 99 99 ILE ILE B . n B 1 119 ILE 119 100 100 ILE ILE B . n B 1 120 ALA 120 101 101 ALA ALA B . n B 1 121 ASP 121 102 102 ASP ASP B . n B 1 122 LEU 122 103 103 LEU LEU B . n B 1 123 ASN 123 104 104 ASN ASN B . n B 1 124 ALA 124 105 105 ALA ALA B . n B 1 125 LYS 125 106 106 LYS LYS B . n B 1 126 GLY 126 107 107 GLY GLY B . n B 1 127 PHE 127 108 108 PHE PHE B . n B 1 128 ASN 128 109 109 ASN ASN B . n B 1 129 GLU 129 110 110 GLU GLU B . n B 1 130 LEU 130 111 111 LEU LEU B . n B 1 131 TYR 131 112 112 TYR TYR B . n B 1 132 ILE 132 113 113 ILE ILE B . n B 1 133 ASP 133 114 114 ASP ASP B . n B 1 134 GLY 134 115 115 GLY GLY B . n B 1 135 GLY 135 116 116 GLY GLY B . n B 1 136 VAL 136 117 117 VAL VAL B . n B 1 137 THR 137 118 118 THR THR B . n B 1 138 ILE 138 119 119 ILE ILE B . n B 1 139 GLN 139 120 120 GLN GLN B . n B 1 140 ASN 140 121 121 ASN ASN B . n B 1 141 PHE 141 122 122 PHE PHE B . n B 1 142 LEU 142 123 123 LEU LEU B . n B 1 143 LYS 143 124 124 LYS LYS B . n B 1 144 GLU 144 125 125 GLU GLU B . n B 1 145 ASP 145 126 126 ASP ASP B . n B 1 146 LEU 146 127 127 LEU LEU B . n B 1 147 ILE 147 128 128 ILE ILE B . n B 1 148 ASP 148 129 129 ASP ASP B . n B 1 149 GLU 149 130 130 GLU GLU B . n B 1 150 MSE 150 131 131 MSE MSE B . n B 1 151 VAL 151 132 132 VAL VAL B . n B 1 152 ILE 152 133 133 ILE ILE B . n B 1 153 THR 153 134 134 THR THR B . n B 1 154 ARG 154 135 135 ARG ARG B . n B 1 155 PHE 155 136 136 PHE PHE B . n B 1 156 PRO 156 137 137 PRO PRO B . n B 1 157 ILE 157 138 138 ILE ILE B . n B 1 158 LEU 158 139 139 LEU LEU B . n B 1 159 LEU 159 140 140 LEU LEU B . n B 1 160 GLY 160 141 141 GLY GLY B . n B 1 161 GLY 161 142 142 GLY GLY B . n B 1 162 GLY 162 143 143 GLY GLY B . n B 1 163 VAL 163 144 144 VAL VAL B . n B 1 164 PRO 164 145 145 PRO PRO B . n B 1 165 LEU 165 146 146 LEU LEU B . n B 1 166 PHE 166 147 147 PHE PHE B . n B 1 167 GLY 167 148 148 GLY GLY B . n B 1 168 GLU 168 149 149 GLU GLU B . n B 1 169 LEU 169 150 150 LEU LEU B . n B 1 170 GLU 170 151 151 GLU GLU B . n B 1 171 SER 171 152 152 SER SER B . n B 1 172 SER 172 153 153 SER SER B . n B 1 173 LEU 173 154 154 LEU LEU B . n B 1 174 SER 174 155 155 SER SER B . n B 1 175 PHE 175 156 156 PHE PHE B . n B 1 176 ASN 176 157 157 ASN ASN B . n B 1 177 VAL 177 158 158 VAL VAL B . n B 1 178 ILE 178 159 159 ILE ILE B . n B 1 179 LYS 179 160 160 LYS LYS B . n B 1 180 SER 180 161 161 SER SER B . n B 1 181 GLU 181 162 162 GLU GLU B . n B 1 182 VAL 182 163 163 VAL VAL B . n B 1 183 VAL 183 164 164 VAL VAL B . n B 1 184 LEU 184 165 165 LEU LEU B . n B 1 185 ASP 185 166 166 ASP ASP B . n B 1 186 SER 186 167 167 SER SER B . n B 1 187 LEU 187 168 168 LEU LEU B . n B 1 188 THR 188 169 169 THR THR B . n B 1 189 GLN 189 170 170 GLN GLN B . n B 1 190 THR 190 171 171 THR THR B . n B 1 191 THR 191 172 172 THR THR B . n B 1 192 TYR 192 173 173 TYR TYR B . n B 1 193 HIS 193 174 174 HIS HIS B . n B 1 194 ARG 194 175 175 ARG ARG B . n B 1 195 LYS 195 176 176 LYS LYS B . n B 1 196 ARG 196 177 177 ARG ARG B . n B 1 197 ALA 197 178 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UNL 1 179 1 UNL UNL A . D 2 UNL 1 180 2 UNL UNL A . E 3 SO4 1 181 8 SO4 SO4 A . F 4 GOL 1 182 9 GOL GOL A . G 4 GOL 1 183 12 GOL GOL A . H 2 UNL 1 179 3 UNL UNL B . I 2 UNL 1 180 4 UNL UNL B . J 3 SO4 1 181 5 SO4 SO4 B . K 3 SO4 1 182 6 SO4 SO4 B . L 3 SO4 1 183 7 SO4 SO4 B . M 4 GOL 1 184 10 GOL GOL B . N 4 GOL 1 185 11 GOL GOL B . O 5 HOH 1 184 184 HOH HOH A . O 5 HOH 2 185 185 HOH HOH A . O 5 HOH 3 186 186 HOH HOH A . O 5 HOH 4 187 187 HOH HOH A . O 5 HOH 5 188 188 HOH HOH A . O 5 HOH 6 189 13 HOH HOH A . O 5 HOH 7 190 14 HOH HOH A . O 5 HOH 8 191 191 HOH HOH A . O 5 HOH 9 192 192 HOH HOH A . O 5 HOH 10 193 16 HOH HOH A . O 5 HOH 11 194 194 HOH HOH A . O 5 HOH 12 195 195 HOH HOH A . O 5 HOH 13 196 17 HOH HOH A . O 5 HOH 14 197 197 HOH HOH A . O 5 HOH 15 198 198 HOH HOH A . O 5 HOH 16 199 20 HOH HOH A . O 5 HOH 17 200 22 HOH HOH A . O 5 HOH 18 201 201 HOH HOH A . O 5 HOH 19 202 24 HOH HOH A . O 5 HOH 20 203 25 HOH HOH A . O 5 HOH 21 204 26 HOH HOH A . O 5 HOH 22 205 27 HOH HOH A . O 5 HOH 23 206 206 HOH HOH A . O 5 HOH 24 207 29 HOH HOH A . O 5 HOH 25 208 30 HOH HOH A . O 5 HOH 26 209 209 HOH HOH A . O 5 HOH 27 210 34 HOH HOH A . O 5 HOH 28 211 36 HOH HOH A . O 5 HOH 29 212 37 HOH HOH A . O 5 HOH 30 213 38 HOH HOH A . O 5 HOH 31 214 39 HOH HOH A . O 5 HOH 32 215 40 HOH HOH A . O 5 HOH 33 216 41 HOH HOH A . O 5 HOH 34 217 42 HOH HOH A . O 5 HOH 35 218 44 HOH HOH A . O 5 HOH 36 219 50 HOH HOH A . O 5 HOH 37 220 53 HOH HOH A . O 5 HOH 38 221 54 HOH HOH A . O 5 HOH 39 222 55 HOH HOH A . O 5 HOH 40 223 60 HOH HOH A . O 5 HOH 41 224 62 HOH HOH A . O 5 HOH 42 225 64 HOH HOH A . O 5 HOH 43 226 65 HOH HOH A . O 5 HOH 44 227 66 HOH HOH A . O 5 HOH 45 228 69 HOH HOH A . O 5 HOH 46 229 71 HOH HOH A . O 5 HOH 47 230 72 HOH HOH A . O 5 HOH 48 231 73 HOH HOH A . O 5 HOH 49 232 74 HOH HOH A . O 5 HOH 50 233 75 HOH HOH A . O 5 HOH 51 234 80 HOH HOH A . O 5 HOH 52 235 82 HOH HOH A . O 5 HOH 53 236 83 HOH HOH A . O 5 HOH 54 237 84 HOH HOH A . O 5 HOH 55 238 87 HOH HOH A . O 5 HOH 56 239 89 HOH HOH A . O 5 HOH 57 240 91 HOH HOH A . O 5 HOH 58 241 92 HOH HOH A . O 5 HOH 59 242 93 HOH HOH A . O 5 HOH 60 243 94 HOH HOH A . O 5 HOH 61 244 97 HOH HOH A . O 5 HOH 62 245 98 HOH HOH A . O 5 HOH 63 246 101 HOH HOH A . O 5 HOH 64 247 102 HOH HOH A . O 5 HOH 65 248 103 HOH HOH A . O 5 HOH 66 249 105 HOH HOH A . O 5 HOH 67 250 106 HOH HOH A . O 5 HOH 68 251 107 HOH HOH A . O 5 HOH 69 252 108 HOH HOH A . O 5 HOH 70 253 109 HOH HOH A . O 5 HOH 71 254 110 HOH HOH A . O 5 HOH 72 255 111 HOH HOH A . O 5 HOH 73 256 112 HOH HOH A . O 5 HOH 74 257 113 HOH HOH A . O 5 HOH 75 258 114 HOH HOH A . O 5 HOH 76 259 115 HOH HOH A . O 5 HOH 77 260 116 HOH HOH A . O 5 HOH 78 261 117 HOH HOH A . O 5 HOH 79 262 119 HOH HOH A . O 5 HOH 80 263 120 HOH HOH A . O 5 HOH 81 264 121 HOH HOH A . O 5 HOH 82 265 123 HOH HOH A . O 5 HOH 83 266 126 HOH HOH A . O 5 HOH 84 267 127 HOH HOH A . O 5 HOH 85 268 137 HOH HOH A . O 5 HOH 86 269 140 HOH HOH A . O 5 HOH 87 270 141 HOH HOH A . O 5 HOH 88 271 142 HOH HOH A . O 5 HOH 89 272 143 HOH HOH A . O 5 HOH 90 273 144 HOH HOH A . O 5 HOH 91 274 145 HOH HOH A . O 5 HOH 92 275 150 HOH HOH A . O 5 HOH 93 276 154 HOH HOH A . O 5 HOH 94 277 156 HOH HOH A . O 5 HOH 95 278 161 HOH HOH A . O 5 HOH 96 279 164 HOH HOH A . O 5 HOH 97 280 165 HOH HOH A . O 5 HOH 98 281 166 HOH HOH A . O 5 HOH 99 282 169 HOH HOH A . O 5 HOH 100 283 170 HOH HOH A . O 5 HOH 101 284 175 HOH HOH A . O 5 HOH 102 285 176 HOH HOH A . O 5 HOH 103 286 177 HOH HOH A . O 5 HOH 104 287 179 HOH HOH A . O 5 HOH 105 288 180 HOH HOH A . O 5 HOH 106 289 182 HOH HOH A . O 5 HOH 107 290 183 HOH HOH A . P 5 HOH 1 186 15 HOH HOH B . P 5 HOH 2 187 18 HOH HOH B . P 5 HOH 3 188 19 HOH HOH B . P 5 HOH 4 189 189 HOH HOH B . P 5 HOH 5 190 190 HOH HOH B . P 5 HOH 6 191 21 HOH HOH B . P 5 HOH 7 192 23 HOH HOH B . P 5 HOH 8 193 193 HOH HOH B . P 5 HOH 9 194 28 HOH HOH B . P 5 HOH 10 195 31 HOH HOH B . P 5 HOH 11 196 196 HOH HOH B . P 5 HOH 12 197 32 HOH HOH B . P 5 HOH 13 198 33 HOH HOH B . P 5 HOH 14 199 199 HOH HOH B . P 5 HOH 15 200 200 HOH HOH B . P 5 HOH 16 201 35 HOH HOH B . P 5 HOH 17 202 202 HOH HOH B . P 5 HOH 18 203 203 HOH HOH B . P 5 HOH 19 204 204 HOH HOH B . P 5 HOH 20 205 205 HOH HOH B . P 5 HOH 21 206 43 HOH HOH B . P 5 HOH 22 207 207 HOH HOH B . P 5 HOH 23 208 208 HOH HOH B . P 5 HOH 24 209 45 HOH HOH B . P 5 HOH 25 210 46 HOH HOH B . P 5 HOH 26 211 47 HOH HOH B . P 5 HOH 27 212 48 HOH HOH B . P 5 HOH 28 213 49 HOH HOH B . P 5 HOH 29 214 51 HOH HOH B . P 5 HOH 30 215 52 HOH HOH B . P 5 HOH 31 216 56 HOH HOH B . P 5 HOH 32 217 57 HOH HOH B . P 5 HOH 33 218 58 HOH HOH B . P 5 HOH 34 219 59 HOH HOH B . P 5 HOH 35 220 61 HOH HOH B . P 5 HOH 36 221 63 HOH HOH B . P 5 HOH 37 222 67 HOH HOH B . P 5 HOH 38 223 68 HOH HOH B . P 5 HOH 39 224 70 HOH HOH B . P 5 HOH 40 225 76 HOH HOH B . P 5 HOH 41 226 77 HOH HOH B . P 5 HOH 42 227 78 HOH HOH B . P 5 HOH 43 228 79 HOH HOH B . P 5 HOH 44 229 81 HOH HOH B . P 5 HOH 45 230 85 HOH HOH B . P 5 HOH 46 231 86 HOH HOH B . P 5 HOH 47 232 88 HOH HOH B . P 5 HOH 48 233 90 HOH HOH B . P 5 HOH 49 234 95 HOH HOH B . P 5 HOH 50 235 96 HOH HOH B . P 5 HOH 51 236 99 HOH HOH B . P 5 HOH 52 237 100 HOH HOH B . P 5 HOH 53 238 104 HOH HOH B . P 5 HOH 54 239 118 HOH HOH B . P 5 HOH 55 240 122 HOH HOH B . P 5 HOH 56 241 124 HOH HOH B . P 5 HOH 57 242 125 HOH HOH B . P 5 HOH 58 243 128 HOH HOH B . P 5 HOH 59 244 129 HOH HOH B . P 5 HOH 60 245 130 HOH HOH B . P 5 HOH 61 246 131 HOH HOH B . P 5 HOH 62 247 132 HOH HOH B . P 5 HOH 63 248 133 HOH HOH B . P 5 HOH 64 249 134 HOH HOH B . P 5 HOH 65 250 135 HOH HOH B . P 5 HOH 66 251 136 HOH HOH B . P 5 HOH 67 252 138 HOH HOH B . P 5 HOH 68 253 139 HOH HOH B . P 5 HOH 69 254 146 HOH HOH B . P 5 HOH 70 255 147 HOH HOH B . P 5 HOH 71 256 148 HOH HOH B . P 5 HOH 72 257 149 HOH HOH B . P 5 HOH 73 258 151 HOH HOH B . P 5 HOH 74 259 152 HOH HOH B . P 5 HOH 75 260 153 HOH HOH B . P 5 HOH 76 261 155 HOH HOH B . P 5 HOH 77 262 157 HOH HOH B . P 5 HOH 78 263 158 HOH HOH B . P 5 HOH 79 264 159 HOH HOH B . P 5 HOH 80 265 160 HOH HOH B . P 5 HOH 81 266 162 HOH HOH B . P 5 HOH 82 267 163 HOH HOH B . P 5 HOH 83 268 167 HOH HOH B . P 5 HOH 84 269 168 HOH HOH B . P 5 HOH 85 270 171 HOH HOH B . P 5 HOH 86 271 172 HOH HOH B . P 5 HOH 87 272 173 HOH HOH B . P 5 HOH 88 273 174 HOH HOH B . P 5 HOH 89 274 178 HOH HOH B . P 5 HOH 90 275 181 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 61 A MSE 42 ? MET SELENOMETHIONINE 3 A MSE 69 A MSE 50 ? MET SELENOMETHIONINE 4 A MSE 76 A MSE 57 ? MET SELENOMETHIONINE 5 A MSE 97 A MSE 78 ? MET SELENOMETHIONINE 6 A MSE 150 A MSE 131 ? MET SELENOMETHIONINE 7 B MSE 20 B MSE 1 ? MET SELENOMETHIONINE 8 B MSE 61 B MSE 42 ? MET SELENOMETHIONINE 9 B MSE 69 B MSE 50 ? MET SELENOMETHIONINE 10 B MSE 76 B MSE 57 ? MET SELENOMETHIONINE 11 B MSE 97 B MSE 78 ? MET SELENOMETHIONINE 12 B MSE 150 B MSE 131 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6040 ? 1 MORE -90 ? 1 'SSA (A^2)' 17660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-12-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 12.3130 22.3774 62.6231 -0.0475 -0.1097 -0.0954 0.0197 -0.0167 0.0225 1.3919 0.8889 1.2695 -0.1582 -0.3057 0.3108 0.0042 0.0320 -0.0362 -0.1060 0.0205 0.0269 0.0517 0.0356 -0.0884 'X-RAY DIFFRACTION' 2 ? refined 31.0194 10.8320 39.7749 -0.0443 -0.0609 -0.0705 0.0140 -0.0029 0.0009 0.8282 1.4269 1.2518 -0.5436 -1.0169 0.6374 0.0009 0.0159 -0.0168 0.0294 0.0208 -0.1212 -0.1371 -0.0643 0.1001 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -6 A 177 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 177 ? . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3KY8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE CONSTRUCT (RESIDUES 1-178) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG.' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 12 ? ? CG A ASP 12 ? ? OD1 A ASP 12 ? ? 126.70 118.30 8.40 0.90 N 2 1 CB A ASP 12 ? ? CG A ASP 12 ? ? OD2 A ASP 12 ? ? 111.83 118.30 -6.47 0.90 N 3 1 NE B ARG 52 ? ? CZ B ARG 52 ? ? NH1 B ARG 52 ? ? 123.42 120.30 3.12 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 166 ? ? 68.75 -32.02 2 1 ASN B 30 ? ? -152.21 61.95 3 1 LYS B 160 ? ? -170.23 141.10 4 1 ASP B 166 ? ? 65.54 -35.74 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 18 ? NZ ? A LYS 37 NZ 2 1 Y 1 A ARG 52 ? CZ ? A ARG 71 CZ 3 1 Y 1 A ARG 52 ? NH1 ? A ARG 71 NH1 4 1 Y 1 A ARG 52 ? NH2 ? A ARG 71 NH2 5 1 Y 1 A ASP 62 ? CG ? A ASP 81 CG 6 1 Y 1 A ASP 62 ? OD1 ? A ASP 81 OD1 7 1 Y 1 A ASP 62 ? OD2 ? A ASP 81 OD2 8 1 Y 1 A THR 77 ? OG1 ? A THR 96 OG1 9 1 Y 1 A THR 77 ? CG2 ? A THR 96 CG2 10 1 Y 1 A THR 79 ? OG1 ? A THR 98 OG1 11 1 Y 1 A THR 79 ? CG2 ? A THR 98 CG2 12 1 Y 1 A LYS 93 ? CG ? A LYS 112 CG 13 1 Y 1 A LYS 93 ? CD ? A LYS 112 CD 14 1 Y 1 A LYS 93 ? CE ? A LYS 112 CE 15 1 Y 1 A LYS 93 ? NZ ? A LYS 112 NZ 16 1 Y 1 B LYS 21 ? CE ? B LYS 40 CE 17 1 Y 1 B LYS 21 ? NZ ? B LYS 40 NZ 18 1 Y 1 B LYS 93 ? CG ? B LYS 112 CG 19 1 Y 1 B LYS 93 ? CD ? B LYS 112 CD 20 1 Y 1 B LYS 93 ? CE ? B LYS 112 CE 21 1 Y 1 B LYS 93 ? NZ ? B LYS 112 NZ 22 1 Y 1 B LYS 95 ? CE ? B LYS 114 CE 23 1 Y 1 B LYS 95 ? NZ ? B LYS 114 NZ 24 1 Y 1 B LYS 124 ? CE ? B LYS 143 CE 25 1 Y 1 B LYS 124 ? NZ ? B LYS 143 NZ 26 1 Y 1 B ARG 177 ? CD ? B ARG 196 CD 27 1 Y 1 B ARG 177 ? NE ? B ARG 196 NE 28 1 Y 1 B ARG 177 ? CZ ? B ARG 196 CZ 29 1 Y 1 B ARG 177 ? NH1 ? B ARG 196 NH1 30 1 Y 1 B ARG 177 ? NH2 ? B ARG 196 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A ALA 178 ? A ALA 197 14 1 Y 1 B MSE -18 ? B MSE 1 15 1 Y 1 B GLY -17 ? B GLY 2 16 1 Y 1 B SER -16 ? B SER 3 17 1 Y 1 B ASP -15 ? B ASP 4 18 1 Y 1 B LYS -14 ? B LYS 5 19 1 Y 1 B ILE -13 ? B ILE 6 20 1 Y 1 B HIS -12 ? B HIS 7 21 1 Y 1 B HIS -11 ? B HIS 8 22 1 Y 1 B HIS -10 ? B HIS 9 23 1 Y 1 B HIS -9 ? B HIS 10 24 1 Y 1 B HIS -8 ? B HIS 11 25 1 Y 1 B HIS -7 ? B HIS 12 26 1 Y 1 B GLU -6 ? B GLU 13 27 1 Y 1 B ASN -5 ? B ASN 14 28 1 Y 1 B LEU -4 ? B LEU 15 29 1 Y 1 B TYR -3 ? B TYR 16 30 1 Y 1 B PHE -2 ? B PHE 17 31 1 Y 1 B GLN -1 ? B GLN 18 32 1 Y 1 B GLY 0 ? B GLY 19 33 1 Y 1 B ALA 178 ? B ALA 197 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN LIGAND' UNL 3 'SULFATE ION' SO4 4 GLYCEROL GOL 5 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? #