HEADER TRANSCRIPTION 10-DEC-09 3L0L TITLE CRYSTAL STRUCTURE OF ORPHAN NUCLEAR RECEPTOR RORGAMMA IN COMPLEX WITH TITLE 2 NATURAL LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RORGAMMA; COMPND 5 SYNONYM: RETINOID-RELATED ORPHAN RECEPTOR-GAMMA, NUCLEAR RECEPTOR COMPND 6 RZR-GAMMA, NUCLEAR RECEPTOR SUBFAMILY 1 GROUP F MEMBER 3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SCR2-2; COMPND 10 CHAIN: C, E; COMPND 11 FRAGMENT: SRC2-2; COMPND 12 SYNONYM: NCOA-2, TRANSCRIPTIONAL INTERMEDIARY FACTOR 2, HTIF2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: NCOA2, TIF2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTOR, RORGAMMA, DNA-BINDING, METAL-BINDING, NUCLEUS, KEYWDS 2 RECEPTOR, TRANSCRIPTION, TRANSCRIPTION REGULATION, ZINC-FINGER, KEYWDS 3 ACTIVATOR, PHOSPHOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.MARTYNOWSKI,Y.LI REVDAT 5 21-FEB-24 3L0L 1 REMARK REVDAT 4 26-FEB-20 3L0L 1 REMARK REVDAT 3 21-JAN-15 3L0L 1 DBREF VERSN REVDAT 2 12-MAY-10 3L0L 1 JRNL REVDAT 1 16-MAR-10 3L0L 0 JRNL AUTH L.JIN,D.MARTYNOWSKI,S.ZHENG,T.WADA,W.XIE,Y.LI JRNL TITL STRUCTURAL BASIS FOR HYDROXYCHOLESTEROLS AS NATURAL LIGANDS JRNL TITL 2 OF ORPHAN NUCLEAR RECEPTOR RORGAMMA. JRNL REF MOL.ENDOCRINOL. V. 24 923 2010 JRNL REFN ISSN 0888-8809 JRNL PMID 20203100 JRNL DOI 10.1210/ME.2009-0507 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 49707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2669 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2650 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4243 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 727 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.766 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4441 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5998 ; 1.681 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 514 ; 4.845 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;35.618 ;23.122 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 818 ;16.149 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;19.840 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 669 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3275 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2375 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3070 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 530 ; 0.196 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 100 ; 0.254 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 58 ; 0.292 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2671 ; 1.256 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4188 ; 1.597 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1954 ; 2.858 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1810 ; 4.332 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3L0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000056681. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52446 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 37.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.38750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.97250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.13100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.97250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.38750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.13100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 260 REMARK 465 GLU E 685 REMARK 465 LYS E 686 REMARK 465 HIS E 687 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 602 O HOH B 679 1.77 REMARK 500 OE1 GLN A 346 ND1 HIS C 691 1.91 REMARK 500 O HOH A 604 O HOH A 684 2.00 REMARK 500 O HOH A 719 O HOH B 691 2.06 REMARK 500 O HOH A 687 O HOH A 715 2.14 REMARK 500 O HOH A 127 O HOH A 554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 679 O HOH B 679 3445 1.73 REMARK 500 O HOH A 717 O HOH B 677 2454 1.99 REMARK 500 O HOH A 573 O HOH B 613 3445 2.04 REMARK 500 ND1 HIS A 411 O HOH B 613 3445 2.09 REMARK 500 O HOH A 676 O HOH B 75 1545 2.14 REMARK 500 OE2 GLU B 395 O HOH A 704 2455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 262 123.48 152.52 REMARK 500 GLN A 286 -61.27 74.58 REMARK 500 GLN B 286 -60.66 77.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 227 DISTANCE = 9.10 ANGSTROMS REMARK 525 HOH A 640 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH A 677 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 629 DISTANCE = 6.87 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HC3 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HC3 B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3L0J RELATED DB: PDB DBREF 3L0L A 260 507 UNP P51449 RORG_HUMAN 260 507 DBREF 3L0L C 685 697 UNP Q15596 NCOA2_HUMAN 685 697 DBREF 3L0L B 260 507 UNP P51449 RORG_HUMAN 260 507 DBREF 3L0L E 685 697 UNP Q15596 NCOA2_HUMAN 685 697 SEQRES 1 A 248 PRO GLU ALA PRO TYR ALA SER LEU THR GLU ILE GLU HIS SEQRES 2 A 248 LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS SEQRES 3 A 248 GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN SEQRES 4 A 248 ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SEQRES 5 A 248 SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU SEQRES 6 A 248 THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG SEQRES 7 A 248 LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE SEQRES 8 A 248 VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL SEQRES 9 A 248 ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL SEQRES 10 A 248 PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG SEQRES 11 A 248 ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP SEQRES 12 A 248 PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP SEQRES 13 A 248 GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA SEQRES 14 A 248 HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN SEQRES 15 A 248 LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU SEQRES 16 A 248 CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO SEQRES 17 A 248 PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL SEQRES 18 A 248 GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL SEQRES 19 A 248 VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SEQRES 20 A 248 SER SEQRES 1 C 13 GLU LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SEQRES 1 B 248 PRO GLU ALA PRO TYR ALA SER LEU THR GLU ILE GLU HIS SEQRES 2 B 248 LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS SEQRES 3 B 248 GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN SEQRES 4 B 248 ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SEQRES 5 B 248 SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU SEQRES 6 B 248 THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG SEQRES 7 B 248 LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE SEQRES 8 B 248 VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL SEQRES 9 B 248 ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL SEQRES 10 B 248 PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG SEQRES 11 B 248 ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP SEQRES 12 B 248 PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP SEQRES 13 B 248 GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA SEQRES 14 B 248 HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN SEQRES 15 B 248 LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU SEQRES 16 B 248 CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO SEQRES 17 B 248 PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL SEQRES 18 B 248 GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL SEQRES 19 B 248 VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SEQRES 20 B 248 SER SEQRES 1 E 13 GLU LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER HET HC3 A1001 29 HET HC3 B1001 29 HETNAM HC3 25-HYDROXYCHOLESTEROL HETSYN HC3 (3BETA)-CHOLEST-5-ENE-3,25-DIOL FORMUL 5 HC3 2(C27 H46 O2) FORMUL 7 HOH *727(H2 O) HELIX 1 1 SER A 266 CYS A 285 1 20 HELIX 2 2 ARG A 288 GLN A 295 1 8 HELIX 3 3 SER A 301 LYS A 311 1 11 HELIX 4 4 SER A 312 LEU A 338 1 27 HELIX 5 5 GLY A 340 LEU A 344 5 5 HELIX 6 6 CYS A 345 MET A 365 1 21 HELIX 7 7 GLY A 384 GLY A 392 5 9 HELIX 8 8 CYS A 393 ALA A 409 1 17 HELIX 9 9 SER A 413 ILE A 426 1 14 HELIX 10 10 GLU A 435 THR A 457 1 23 HELIX 11 11 ARG A 459 LEU A 466 5 8 HELIX 12 12 GLY A 470 HIS A 490 1 21 HELIX 13 13 HIS A 490 PHE A 498 1 9 HELIX 14 14 PRO A 499 SER A 507 1 9 HELIX 15 15 HIS C 687 GLN C 695 1 9 HELIX 16 16 SER B 266 GLU B 283 1 18 HELIX 17 17 ARG B 288 GLN B 295 1 8 HELIX 18 18 SER B 301 ARG B 310 1 10 HELIX 19 19 SER B 312 LEU B 338 1 27 HELIX 20 20 CYS B 345 MET B 365 1 21 HELIX 21 21 GLY B 384 GLY B 392 5 9 HELIX 22 22 CYS B 393 ALA B 409 1 17 HELIX 23 23 SER B 413 ILE B 426 1 14 HELIX 24 24 GLU B 435 THR B 457 1 23 HELIX 25 25 ARG B 459 LEU B 466 5 8 HELIX 26 26 GLY B 470 HIS B 490 1 21 HELIX 27 27 HIS B 490 PHE B 498 1 9 HELIX 28 28 PRO B 499 SER B 507 1 9 HELIX 29 29 LYS E 688 ASP E 696 1 9 SHEET 1 A 3 TYR A 369 ASN A 370 0 SHEET 2 A 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 A 3 LYS A 381 GLY A 383 -1 O LYS A 381 N PHE A 378 SHEET 1 B 3 TYR B 369 ASN B 370 0 SHEET 2 B 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 B 3 LYS B 381 GLY B 383 -1 O LYS B 381 N PHE B 378 SITE 1 AC1 12 HOH A 85 HOH A 98 GLN A 286 TRP A 317 SITE 2 AC1 12 HIS A 323 LEU A 324 MET A 365 LEU A 391 SITE 3 AC1 12 LEU A 396 ILE A 397 ILE A 400 HIS A 479 SITE 1 AC2 12 HOH B 43 GLN B 286 TRP B 317 HIS B 323 SITE 2 AC2 12 LEU B 324 ALA B 368 LEU B 391 LEU B 396 SITE 3 AC2 12 ILE B 397 ILE B 400 HIS B 479 HOH B 671 CRYST1 66.775 86.262 91.945 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014976 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010876 0.00000