data_3L8J # _entry.id 3L8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3L8J pdb_00003l8j 10.2210/pdb3l8j/pdb RCSB RCSB056967 ? ? WWPDB D_1000056967 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3L8J _pdbx_database_status.recvd_initial_deposition_date 2009-12-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, X.' 1 'Zhang, R.' 2 'Zhang, H.' 3 'He, Y.' 4 'Ji, W.' 5 'Min, W.' 6 'Boggon, T.J.' 7 # _citation.id primary _citation.title 'Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 285 _citation.page_first 24099 _citation.page_last 24107 _citation.year 2010 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20489202 _citation.pdbx_database_id_DOI 10.1074/jbc.M110.128470 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, X.' 1 ? primary 'Zhang, R.' 2 ? primary 'Zhang, H.' 3 ? primary 'He, Y.' 4 ? primary 'Ji, W.' 5 ? primary 'Min, W.' 6 ? primary 'Boggon, T.J.' 7 ? # _cell.entry_id 3L8J _cell.length_a 77.445 _cell.length_b 77.445 _cell.length_c 108.629 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3L8J _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Programmed cell death protein 10' _entity.formula_weight 23376.994 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TF-1 cell apoptosis-related protein 15, Cerebral cavernous malformations 3 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(UNK)(UNK)(UNK)TTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTE SLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRR ALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA ; _entity_poly.pdbx_seq_one_letter_code_can ;XXXTTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAADDVEE YMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKY SKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 UNK n 1 2 UNK n 1 3 UNK n 1 4 THR n 1 5 THR n 1 6 SER n 1 7 MET n 1 8 VAL n 1 9 SER n 1 10 MET n 1 11 PRO n 1 12 LEU n 1 13 TYR n 1 14 ALA n 1 15 VAL n 1 16 MET n 1 17 TYR n 1 18 PRO n 1 19 VAL n 1 20 PHE n 1 21 ASN n 1 22 GLU n 1 23 LEU n 1 24 GLU n 1 25 ARG n 1 26 VAL n 1 27 ASN n 1 28 LEU n 1 29 SER n 1 30 ALA n 1 31 ALA n 1 32 GLN n 1 33 THR n 1 34 LEU n 1 35 ARG n 1 36 ALA n 1 37 ALA n 1 38 PHE n 1 39 ILE n 1 40 LYS n 1 41 ALA n 1 42 GLU n 1 43 LYS n 1 44 GLU n 1 45 ASN n 1 46 PRO n 1 47 GLY n 1 48 LEU n 1 49 THR n 1 50 GLN n 1 51 ASP n 1 52 ILE n 1 53 ILE n 1 54 MET n 1 55 LYS n 1 56 ILE n 1 57 LEU n 1 58 GLU n 1 59 LYS n 1 60 LYS n 1 61 SER n 1 62 VAL n 1 63 GLU n 1 64 VAL n 1 65 ASN n 1 66 PHE n 1 67 THR n 1 68 GLU n 1 69 SER n 1 70 LEU n 1 71 LEU n 1 72 ARG n 1 73 MET n 1 74 ALA n 1 75 ALA n 1 76 ASP n 1 77 ASP n 1 78 VAL n 1 79 GLU n 1 80 GLU n 1 81 TYR n 1 82 MET n 1 83 ILE n 1 84 GLU n 1 85 ARG n 1 86 PRO n 1 87 GLU n 1 88 PRO n 1 89 GLU n 1 90 PHE n 1 91 GLN n 1 92 ASP n 1 93 LEU n 1 94 ASN n 1 95 GLU n 1 96 LYS n 1 97 ALA n 1 98 ARG n 1 99 ALA n 1 100 LEU n 1 101 LYS n 1 102 GLN n 1 103 ILE n 1 104 LEU n 1 105 SER n 1 106 LYS n 1 107 ILE n 1 108 PRO n 1 109 ASP n 1 110 GLU n 1 111 ILE n 1 112 ASN n 1 113 ASP n 1 114 ARG n 1 115 VAL n 1 116 ARG n 1 117 PHE n 1 118 LEU n 1 119 GLN n 1 120 THR n 1 121 ILE n 1 122 LYS n 1 123 ASP n 1 124 ILE n 1 125 ALA n 1 126 SER n 1 127 ALA n 1 128 ILE n 1 129 LYS n 1 130 GLU n 1 131 LEU n 1 132 LEU n 1 133 ASP n 1 134 THR n 1 135 VAL n 1 136 ASN n 1 137 ASN n 1 138 VAL n 1 139 PHE n 1 140 LYS n 1 141 LYS n 1 142 TYR n 1 143 GLN n 1 144 TYR n 1 145 GLN n 1 146 ASN n 1 147 ARG n 1 148 ARG n 1 149 ALA n 1 150 LEU n 1 151 GLU n 1 152 HIS n 1 153 GLN n 1 154 LYS n 1 155 LYS n 1 156 GLU n 1 157 PHE n 1 158 VAL n 1 159 LYS n 1 160 TYR n 1 161 SER n 1 162 LYS n 1 163 SER n 1 164 PHE n 1 165 SER n 1 166 ASP n 1 167 THR n 1 168 LEU n 1 169 LYS n 1 170 THR n 1 171 TYR n 1 172 PHE n 1 173 LYS n 1 174 ASP n 1 175 GLY n 1 176 LYS n 1 177 ALA n 1 178 ILE n 1 179 ASN n 1 180 VAL n 1 181 PHE n 1 182 VAL n 1 183 SER n 1 184 ALA n 1 185 ASN n 1 186 ARG n 1 187 LEU n 1 188 ILE n 1 189 HIS n 1 190 GLN n 1 191 THR n 1 192 ASN n 1 193 LEU n 1 194 ILE n 1 195 LEU n 1 196 GLN n 1 197 THR n 1 198 PHE n 1 199 LYS n 1 200 THR n 1 201 VAL n 1 202 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PDCD10, CCM3, TFAR15' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'modified pET-32' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDC10_HUMAN _struct_ref.pdbx_db_accession Q9BUL8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESLLRMAADDVEEYMI ERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKS FSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA ; _struct_ref.pdbx_align_begin 14 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3L8J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 202 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BUL8 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 212 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 14 _struct_ref_seq.pdbx_auth_seq_align_end 212 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNK 'L-peptide linking' . UNKNOWN ? 'C4 H9 N O2' 103.120 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3L8J _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.48 _exptl_crystal.density_percent_sol 64.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;0.16 M calcium acetate, 0.08 M sodium cacodylate pH 6.5, 20% glycerol, 13.5% PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2009-07-14 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9551 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9551 # _reflns.entry_id 3L8J _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.00 _reflns.d_resolution_high 3.05 _reflns.number_obs 6699 _reflns.number_all 6769 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI 19.3 _reflns.B_iso_Wilson_estimate 109 _reflns.pdbx_redundancy 13.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.05 _reflns_shell.d_res_low 3.16 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.491 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 9.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 634 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3L8J _refine.ls_number_reflns_obs 6170 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 3.05 _refine.ls_percent_reflns_obs 96.56 _refine.ls_R_factor_obs 0.27895 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.27827 _refine.ls_R_factor_R_free 0.29260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 316 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 146.451 _refine.aniso_B[1][1] 5.61 _refine.aniso_B[2][2] 5.61 _refine.aniso_B[3][3] -11.23 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Residues -3, -2 and -1 are built into poor density, residue assignment is unclear. ; _refine.pdbx_starting_model 'THE P212121 MODEL, PDB entry 3L8I' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.472 _refine.overall_SU_ML 0.532 _refine.overall_SU_B 70.715 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1630 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1630 _refine_hist.d_res_high 3.05 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1654 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.881 1.972 ? 2224 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.899 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.883 24.937 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.178 15.000 ? 329 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.058 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.054 0.200 ? 256 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.021 ? 1207 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.106 1.500 ? 1002 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.199 2.000 ? 1630 'X-RAY DIFFRACTION' ? r_scbond_it 0.228 3.000 ? 652 'X-RAY DIFFRACTION' ? r_scangle_it 0.400 4.500 ? 594 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.050 _refine_ls_shell.d_res_low 3.128 _refine_ls_shell.number_reflns_R_work 420 _refine_ls_shell.R_factor_R_work 0.349 _refine_ls_shell.percent_reflns_obs 95.34 _refine_ls_shell.R_factor_R_free 0.415 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3L8J _struct.title 'Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3L8J _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'cerebral cavernous malformation, FAT domain, dimerization, PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? VAL A 8 ? SER A 16 VAL A 18 5 ? 3 HELX_P HELX_P2 2 SER A 9 ? VAL A 15 ? SER A 19 VAL A 25 1 ? 7 HELX_P HELX_P3 3 VAL A 15 ? GLU A 24 ? VAL A 25 GLU A 34 1 ? 10 HELX_P HELX_P4 4 ASN A 27 ? ASN A 45 ? ASN A 37 ASN A 55 1 ? 19 HELX_P HELX_P5 5 GLY A 47 ? LYS A 59 ? GLY A 57 LYS A 69 1 ? 13 HELX_P HELX_P6 6 LYS A 59 ? ALA A 74 ? LYS A 69 ALA A 84 1 ? 16 HELX_P HELX_P7 7 VAL A 78 ? MET A 82 ? VAL A 88 MET A 92 5 ? 5 HELX_P HELX_P8 8 GLU A 87 ? LYS A 106 ? GLU A 97 LYS A 116 1 ? 20 HELX_P HELX_P9 9 ILE A 107 ? GLU A 110 ? ILE A 117 GLU A 120 5 ? 4 HELX_P HELX_P10 10 ASP A 113 ? LYS A 141 ? ASP A 123 LYS A 151 1 ? 29 HELX_P HELX_P11 11 ALA A 149 ? GLY A 175 ? ALA A 159 GLY A 185 1 ? 27 HELX_P HELX_P12 12 ALA A 177 ? THR A 200 ? ALA A 187 THR A 210 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 86 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 96 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLU _struct_mon_prot_cis.pdbx_label_seq_id_2 87 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLU _struct_mon_prot_cis.pdbx_auth_seq_id_2 97 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.24 # _database_PDB_matrix.entry_id 3L8J _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3L8J _atom_sites.fract_transf_matrix[1][1] 0.012912 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012912 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009206 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 UNK 1 -3 9 UNK SER A . n A 1 2 UNK 2 -2 10 UNK SER A . n A 1 3 UNK 3 -1 11 UNK SER A . n A 1 4 THR 4 14 14 THR THR A . n A 1 5 THR 5 15 15 THR THR A . n A 1 6 SER 6 16 16 SER SER A . n A 1 7 MET 7 17 17 MET MET A . n A 1 8 VAL 8 18 18 VAL VAL A . n A 1 9 SER 9 19 19 SER SER A . n A 1 10 MET 10 20 20 MET MET A . n A 1 11 PRO 11 21 21 PRO PRO A . n A 1 12 LEU 12 22 22 LEU LEU A . n A 1 13 TYR 13 23 23 TYR TYR A . n A 1 14 ALA 14 24 24 ALA ALA A . n A 1 15 VAL 15 25 25 VAL VAL A . n A 1 16 MET 16 26 26 MET MET A . n A 1 17 TYR 17 27 27 TYR TYR A . n A 1 18 PRO 18 28 28 PRO PRO A . n A 1 19 VAL 19 29 29 VAL VAL A . n A 1 20 PHE 20 30 30 PHE PHE A . n A 1 21 ASN 21 31 31 ASN ASN A . n A 1 22 GLU 22 32 32 GLU GLU A . n A 1 23 LEU 23 33 33 LEU LEU A . n A 1 24 GLU 24 34 34 GLU GLU A . n A 1 25 ARG 25 35 35 ARG ARG A . n A 1 26 VAL 26 36 36 VAL VAL A . n A 1 27 ASN 27 37 37 ASN ASN A . n A 1 28 LEU 28 38 38 LEU LEU A . n A 1 29 SER 29 39 39 SER SER A . n A 1 30 ALA 30 40 40 ALA ALA A . n A 1 31 ALA 31 41 41 ALA ALA A . n A 1 32 GLN 32 42 42 GLN GLN A . n A 1 33 THR 33 43 43 THR THR A . n A 1 34 LEU 34 44 44 LEU LEU A . n A 1 35 ARG 35 45 45 ARG ARG A . n A 1 36 ALA 36 46 46 ALA ALA A . n A 1 37 ALA 37 47 47 ALA ALA A . n A 1 38 PHE 38 48 48 PHE PHE A . n A 1 39 ILE 39 49 49 ILE ILE A . n A 1 40 LYS 40 50 50 LYS LYS A . n A 1 41 ALA 41 51 51 ALA ALA A . n A 1 42 GLU 42 52 52 GLU GLU A . n A 1 43 LYS 43 53 53 LYS LYS A . n A 1 44 GLU 44 54 54 GLU GLU A . n A 1 45 ASN 45 55 55 ASN ASN A . n A 1 46 PRO 46 56 56 PRO PRO A . n A 1 47 GLY 47 57 57 GLY GLY A . n A 1 48 LEU 48 58 58 LEU LEU A . n A 1 49 THR 49 59 59 THR THR A . n A 1 50 GLN 50 60 60 GLN GLN A . n A 1 51 ASP 51 61 61 ASP ASP A . n A 1 52 ILE 52 62 62 ILE ILE A . n A 1 53 ILE 53 63 63 ILE ILE A . n A 1 54 MET 54 64 64 MET MET A . n A 1 55 LYS 55 65 65 LYS LYS A . n A 1 56 ILE 56 66 66 ILE ILE A . n A 1 57 LEU 57 67 67 LEU LEU A . n A 1 58 GLU 58 68 68 GLU GLU A . n A 1 59 LYS 59 69 69 LYS LYS A . n A 1 60 LYS 60 70 70 LYS LYS A . n A 1 61 SER 61 71 71 SER SER A . n A 1 62 VAL 62 72 72 VAL VAL A . n A 1 63 GLU 63 73 73 GLU GLU A . n A 1 64 VAL 64 74 74 VAL VAL A . n A 1 65 ASN 65 75 75 ASN ASN A . n A 1 66 PHE 66 76 76 PHE PHE A . n A 1 67 THR 67 77 77 THR THR A . n A 1 68 GLU 68 78 78 GLU GLU A . n A 1 69 SER 69 79 79 SER SER A . n A 1 70 LEU 70 80 80 LEU LEU A . n A 1 71 LEU 71 81 81 LEU LEU A . n A 1 72 ARG 72 82 82 ARG ARG A . n A 1 73 MET 73 83 83 MET MET A . n A 1 74 ALA 74 84 84 ALA ALA A . n A 1 75 ALA 75 85 85 ALA ALA A . n A 1 76 ASP 76 86 86 ASP ASP A . n A 1 77 ASP 77 87 87 ASP ASP A . n A 1 78 VAL 78 88 88 VAL VAL A . n A 1 79 GLU 79 89 89 GLU GLU A . n A 1 80 GLU 80 90 90 GLU GLU A . n A 1 81 TYR 81 91 91 TYR TYR A . n A 1 82 MET 82 92 92 MET MET A . n A 1 83 ILE 83 93 93 ILE ILE A . n A 1 84 GLU 84 94 94 GLU GLU A . n A 1 85 ARG 85 95 95 ARG ARG A . n A 1 86 PRO 86 96 96 PRO PRO A . n A 1 87 GLU 87 97 97 GLU GLU A . n A 1 88 PRO 88 98 98 PRO PRO A . n A 1 89 GLU 89 99 99 GLU GLU A . n A 1 90 PHE 90 100 100 PHE PHE A . n A 1 91 GLN 91 101 101 GLN GLN A . n A 1 92 ASP 92 102 102 ASP ASP A . n A 1 93 LEU 93 103 103 LEU LEU A . n A 1 94 ASN 94 104 104 ASN ASN A . n A 1 95 GLU 95 105 105 GLU GLU A . n A 1 96 LYS 96 106 106 LYS LYS A . n A 1 97 ALA 97 107 107 ALA ALA A . n A 1 98 ARG 98 108 108 ARG ARG A . n A 1 99 ALA 99 109 109 ALA ALA A . n A 1 100 LEU 100 110 110 LEU LEU A . n A 1 101 LYS 101 111 111 LYS LYS A . n A 1 102 GLN 102 112 112 GLN GLN A . n A 1 103 ILE 103 113 113 ILE ILE A . n A 1 104 LEU 104 114 114 LEU LEU A . n A 1 105 SER 105 115 115 SER SER A . n A 1 106 LYS 106 116 116 LYS LYS A . n A 1 107 ILE 107 117 117 ILE ILE A . n A 1 108 PRO 108 118 118 PRO PRO A . n A 1 109 ASP 109 119 119 ASP ASP A . n A 1 110 GLU 110 120 120 GLU GLU A . n A 1 111 ILE 111 121 121 ILE ILE A . n A 1 112 ASN 112 122 122 ASN ASN A . n A 1 113 ASP 113 123 123 ASP ASP A . n A 1 114 ARG 114 124 124 ARG ARG A . n A 1 115 VAL 115 125 125 VAL VAL A . n A 1 116 ARG 116 126 126 ARG ARG A . n A 1 117 PHE 117 127 127 PHE PHE A . n A 1 118 LEU 118 128 128 LEU LEU A . n A 1 119 GLN 119 129 129 GLN GLN A . n A 1 120 THR 120 130 130 THR THR A . n A 1 121 ILE 121 131 131 ILE ILE A . n A 1 122 LYS 122 132 132 LYS LYS A . n A 1 123 ASP 123 133 133 ASP ASP A . n A 1 124 ILE 124 134 134 ILE ILE A . n A 1 125 ALA 125 135 135 ALA ALA A . n A 1 126 SER 126 136 136 SER SER A . n A 1 127 ALA 127 137 137 ALA ALA A . n A 1 128 ILE 128 138 138 ILE ILE A . n A 1 129 LYS 129 139 139 LYS LYS A . n A 1 130 GLU 130 140 140 GLU GLU A . n A 1 131 LEU 131 141 141 LEU LEU A . n A 1 132 LEU 132 142 142 LEU LEU A . n A 1 133 ASP 133 143 143 ASP ASP A . n A 1 134 THR 134 144 144 THR THR A . n A 1 135 VAL 135 145 145 VAL VAL A . n A 1 136 ASN 136 146 146 ASN ASN A . n A 1 137 ASN 137 147 147 ASN ASN A . n A 1 138 VAL 138 148 148 VAL VAL A . n A 1 139 PHE 139 149 149 PHE PHE A . n A 1 140 LYS 140 150 150 LYS LYS A . n A 1 141 LYS 141 151 151 LYS LYS A . n A 1 142 TYR 142 152 152 TYR TYR A . n A 1 143 GLN 143 153 153 GLN GLN A . n A 1 144 TYR 144 154 154 TYR TYR A . n A 1 145 GLN 145 155 155 GLN GLN A . n A 1 146 ASN 146 156 156 ASN ASN A . n A 1 147 ARG 147 157 157 ARG ARG A . n A 1 148 ARG 148 158 158 ARG ARG A . n A 1 149 ALA 149 159 159 ALA ALA A . n A 1 150 LEU 150 160 160 LEU LEU A . n A 1 151 GLU 151 161 161 GLU GLU A . n A 1 152 HIS 152 162 162 HIS HIS A . n A 1 153 GLN 153 163 163 GLN GLN A . n A 1 154 LYS 154 164 164 LYS LYS A . n A 1 155 LYS 155 165 165 LYS LYS A . n A 1 156 GLU 156 166 166 GLU GLU A . n A 1 157 PHE 157 167 167 PHE PHE A . n A 1 158 VAL 158 168 168 VAL VAL A . n A 1 159 LYS 159 169 169 LYS LYS A . n A 1 160 TYR 160 170 170 TYR TYR A . n A 1 161 SER 161 171 171 SER SER A . n A 1 162 LYS 162 172 172 LYS LYS A . n A 1 163 SER 163 173 173 SER SER A . n A 1 164 PHE 164 174 174 PHE PHE A . n A 1 165 SER 165 175 175 SER SER A . n A 1 166 ASP 166 176 176 ASP ASP A . n A 1 167 THR 167 177 177 THR THR A . n A 1 168 LEU 168 178 178 LEU LEU A . n A 1 169 LYS 169 179 179 LYS LYS A . n A 1 170 THR 170 180 180 THR THR A . n A 1 171 TYR 171 181 181 TYR TYR A . n A 1 172 PHE 172 182 182 PHE PHE A . n A 1 173 LYS 173 183 183 LYS LYS A . n A 1 174 ASP 174 184 184 ASP ASP A . n A 1 175 GLY 175 185 185 GLY GLY A . n A 1 176 LYS 176 186 186 LYS LYS A . n A 1 177 ALA 177 187 187 ALA ALA A . n A 1 178 ILE 178 188 188 ILE ILE A . n A 1 179 ASN 179 189 189 ASN ASN A . n A 1 180 VAL 180 190 190 VAL VAL A . n A 1 181 PHE 181 191 191 PHE PHE A . n A 1 182 VAL 182 192 192 VAL VAL A . n A 1 183 SER 183 193 193 SER SER A . n A 1 184 ALA 184 194 194 ALA ALA A . n A 1 185 ASN 185 195 195 ASN ASN A . n A 1 186 ARG 186 196 196 ARG ARG A . n A 1 187 LEU 187 197 197 LEU LEU A . n A 1 188 ILE 188 198 198 ILE ILE A . n A 1 189 HIS 189 199 199 HIS HIS A . n A 1 190 GLN 190 200 200 GLN GLN A . n A 1 191 THR 191 201 201 THR THR A . n A 1 192 ASN 192 202 202 ASN ASN A . n A 1 193 LEU 193 203 203 LEU LEU A . n A 1 194 ILE 194 204 204 ILE ILE A . n A 1 195 LEU 195 205 205 LEU LEU A . n A 1 196 GLN 196 206 206 GLN GLN A . n A 1 197 THR 197 207 207 THR THR A . n A 1 198 PHE 198 208 208 PHE PHE A . n A 1 199 LYS 199 209 209 LYS LYS A . n A 1 200 THR 200 210 210 THR THR A . n A 1 201 VAL 201 211 ? ? ? A . n A 1 202 ALA 202 212 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3700 ? 1 MORE -39 ? 1 'SSA (A^2)' 22640 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/4 0.0000000000 -1.0000000000 0.0000000000 77.4450000000 -1.0000000000 0.0000000000 0.0000000000 77.4450000000 0.0000000000 0.0000000000 -1.0000000000 27.1572500000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 54.2645 27.3840 19.2442 0.3899 0.4479 0.2035 0.3363 -0.2013 -0.2785 10.2247 11.0703 14.9114 3.1313 6.2660 0.6746 1.1338 0.2457 -0.2971 0.2081 0.0414 -0.3427 2.2397 1.8038 -1.1753 'X-RAY DIFFRACTION' 2 ? refined 20.8587 19.9686 14.6578 0.3478 0.5535 0.5892 0.1576 -0.1018 0.4663 12.8797 8.3192 7.0042 4.8837 -2.8661 -4.9042 -0.2006 -0.3794 -0.6435 -0.4162 1.0693 1.2207 0.1280 -0.8815 -0.8687 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 14 ? ? A 69 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 70 ? ? A 210 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3L8J _pdbx_entry_details.sequence_details ;RESIDUES -3, -2 AND -1 ARE BUILT INTO POOR DENSITY, RESIDUE ASSIGNMENT IS UNCLEAR. THE COMPLETE CRYSTALLIZED SEQUENCE IS: GHMRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVEVNFTESL LRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEH QKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 69 ? ? -88.23 33.32 2 1 ALA A 84 ? ? -74.60 43.90 3 1 ASP A 87 ? ? 51.78 75.48 4 1 GLU A 97 ? ? -144.99 -68.37 5 1 LYS A 151 ? ? -94.16 -64.18 6 1 ASN A 156 ? ? 71.59 -27.04 7 1 ARG A 158 ? ? -163.37 36.64 8 1 LYS A 183 ? ? -135.58 -38.56 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 UNK _pdbx_validate_polymer_linkage.auth_seq_id_1 -1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 THR _pdbx_validate_polymer_linkage.auth_seq_id_2 14 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 8.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 211 ? A VAL 201 2 1 Y 1 A ALA 212 ? A ALA 202 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3L8I _pdbx_initial_refinement_model.details 'THE P212121 MODEL, PDB entry 3L8I' #