data_3LA5 # _entry.id 3LA5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LA5 pdb_00003la5 10.2210/pdb3la5/pdb NDB NA0415 ? ? RCSB RCSB057025 ? ? WWPDB D_1000057025 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1Y26 _pdbx_database_related.details 'Adenine riboswitch' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3LA5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-01-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dunstan, M.S.' 1 'Leys, D.' 2 # _citation.id primary _citation.title 'Reengineering orthogonally selective riboswitches' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 2830 _citation.page_last 2835 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20133756 _citation.pdbx_database_id_DOI 10.1073/pnas.0911209107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dixon, N.' 1 ? primary 'Duncan, J.N.' 2 ? primary 'Geerlings, T.' 3 ? primary 'Dunstan, M.S.' 4 ? primary 'McCarthy, J.E.G.' 5 ? primary 'Leys, D.' 6 ? primary 'Micklefield, J.' 7 ? # _cell.length_a 66.845 _cell.length_b 125.105 _cell.length_c 24.990 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3LA5 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3LA5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Adenosine RIboswitch' 22700.432 1 ? 'U47C, U51C, U74C' ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 10 ? ? ? ? 3 non-polymer syn '6-amino-1,3,5-triazin-2(1H)-one' 112.090 1 ? ? ? ? 4 water nat water 18.015 382 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCUUCAUAUAAUCCGAAUGAUAUGGUUUCGGAGCUUCCACCAAGAGCCUUAAACUCUUGACUAUGGAGUC _entity_poly.pdbx_seq_one_letter_code_can GGCUUCAUAUAAUCCGAAUGAUAUGGUUUCGGAGCUUCCACCAAGAGCCUUAAACUCUUGACUAUGGAGUC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 U n 1 5 U n 1 6 C n 1 7 A n 1 8 U n 1 9 A n 1 10 U n 1 11 A n 1 12 A n 1 13 U n 1 14 C n 1 15 C n 1 16 G n 1 17 A n 1 18 A n 1 19 U n 1 20 G n 1 21 A n 1 22 U n 1 23 A n 1 24 U n 1 25 G n 1 26 G n 1 27 U n 1 28 U n 1 29 U n 1 30 C n 1 31 G n 1 32 G n 1 33 A n 1 34 G n 1 35 C n 1 36 U n 1 37 U n 1 38 C n 1 39 C n 1 40 A n 1 41 C n 1 42 C n 1 43 A n 1 44 A n 1 45 G n 1 46 A n 1 47 G n 1 48 C n 1 49 C n 1 50 U n 1 51 U n 1 52 A n 1 53 A n 1 54 A n 1 55 C n 1 56 U n 1 57 C n 1 58 U n 1 59 U n 1 60 G n 1 61 A n 1 62 C n 1 63 U n 1 64 A n 1 65 U n 1 66 G n 1 67 G n 1 68 A n 1 69 G n 1 70 U n 1 71 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Bacillus subtilis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1423 _pdbx_entity_src_syn.details 'in vitro expression' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3LA5 _struct_ref.pdbx_db_accession 3LA5 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 13 _struct_ref.pdbx_seq_one_letter_code GGCUUCAUAUAAUCCGAAUGAUAUGGUUUCGGAGCUUCCACCAAGAGCCUUAAACUCUUGACUAUGGAGUC _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LA5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 71 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3LA5 _struct_ref_seq.db_align_beg 13 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 83 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 13 _struct_ref_seq.pdbx_auth_seq_align_end 83 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5AZ non-polymer . '6-amino-1,3,5-triazin-2(1H)-one' 5-Azacytosine 'C3 H4 N4 O' 112.090 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.crystals_number 1 _exptl.entry_id 3LA5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 46.56 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '3M 1,6-hexanediol, 0.1M Tris-HCl (pH 9.0), 200mM MgCl2, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-08-05 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 # _reflns.entry_id 3LA5 _reflns.B_iso_Wilson_estimate 15.630 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 26.083 _reflns.number_all 24047 _reflns.number_obs 23579 _reflns.percent_possible_obs 94.4 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rsym_value 0.091 _reflns.pdbx_netI_over_sigmaI 16.88 _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 80.7 _reflns_shell.Rmerge_I_obs 0.274 _reflns_shell.meanI_over_sigI_obs 5.25 _reflns_shell.pdbx_Rsym_value 0.308 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.number_unique_all 3073 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LA5 _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 26.080 _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.010 _refine.ls_number_reflns_obs 23538 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.181 _refine.ls_R_factor_R_work 0.180 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.202 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.300 _refine.ls_number_reflns_R_free 1247 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.817 _refine.solvent_model_param_bsol 39.361 _refine.solvent_model_param_ksol 0.400 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.135 _refine.aniso_B[2][2] -2.907 _refine.aniso_B[3][3] 0.771 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.150 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1Y26' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.870 _refine.B_iso_max 83.59 _refine.B_iso_min 8.03 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I 2.0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1503 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 382 _refine_hist.number_atoms_total 1903 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 26.080 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1686 0.005 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2620 1.229 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 355 0.059 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 72 0.006 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 707 19.805 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.700 1.768 9 84.000 2082 . 0.197 0.214 . 109 . 2191 . . 'X-RAY DIFFRACTION' 1.768 1.849 9 100.000 2457 . 0.191 0.243 . 131 . 2588 . . 'X-RAY DIFFRACTION' 1.849 1.946 9 100.000 2476 . 0.196 0.235 . 153 . 2629 . . 'X-RAY DIFFRACTION' 1.946 2.068 9 100.000 2464 . 0.189 0.258 . 152 . 2616 . . 'X-RAY DIFFRACTION' 2.068 2.228 9 100.000 2506 . 0.192 0.240 . 143 . 2649 . . 'X-RAY DIFFRACTION' 2.228 2.452 9 100.000 2514 . 0.196 0.257 . 132 . 2646 . . 'X-RAY DIFFRACTION' 2.452 2.806 9 100.000 2541 . 0.201 0.207 . 136 . 2677 . . 'X-RAY DIFFRACTION' 2.806 3.534 9 100.000 2561 . 0.156 0.165 . 149 . 2710 . . 'X-RAY DIFFRACTION' 3.534 26.083 9 99.000 2690 . 0.160 0.157 . 142 . 2832 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3LA5 _struct.title 'X-ray crystal structure of mc6 RNA Riboswitch bound to azacytosine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LA5 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA, Riboswitch, gene regulation, synthetic biology' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 3 ? M N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B MG . MG ? ? ? 1_555 A A 12 OP1 ? ? A MG 1 A A 24 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 1 A HOH 105 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 1 A HOH 108 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 1 A HOH 109 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 1 A HOH 113 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 1 A HOH 120 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 2 A HOH 117 1_555 ? ? ? ? ? ? ? 2.211 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 2 A HOH 118 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 2 A HOH 395 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 2 A HOH 442 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 104 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 106 1_555 ? ? ? ? ? ? ? 2.161 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 110 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 114 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc15 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 356 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc16 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 3 A HOH 382 1_555 ? ? ? ? ? ? ? 2.167 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 A A 11 OP2 ? ? A MG 4 A A 23 1_555 ? ? ? ? ? ? ? 2.131 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 A A 12 OP2 ? ? A MG 4 A A 24 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc19 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 4 A HOH 128 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc20 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 4 A HOH 200 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc21 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 4 A HOH 410 1_555 ? ? ? ? ? ? ? 2.459 ? ? metalc22 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 4 A HOH 416 1_555 ? ? ? ? ? ? ? 2.513 ? ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 A U 56 OP1 ? ? A MG 5 A U 68 1_555 ? ? ? ? ? ? ? 1.825 ? ? metalc24 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 5 A HOH 147 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc25 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 5 A HOH 155 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc26 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 5 A HOH 378 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc27 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 5 A HOH 435 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc28 metalc ? ? G MG . MG ? ? ? 1_555 A C 39 OP1 ? ? A MG 6 A C 51 1_555 ? ? ? ? ? ? ? 2.059 ? ? metalc29 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 6 A HOH 107 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc30 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 6 A HOH 116 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc31 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 6 A HOH 374 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc32 metalc ? ? H MG . MG ? ? ? 1_555 A A 11 OP1 ? ? A MG 7 A A 23 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc33 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 7 A HOH 127 1_555 ? ? ? ? ? ? ? 2.415 ? ? metalc34 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 7 A HOH 143 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc35 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 7 A HOH 160 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc36 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 7 A HOH 165 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc37 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 7 A HOH 241 1_555 ? ? ? ? ? ? ? 2.485 ? ? metalc38 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 95 1_555 ? ? ? ? ? ? ? 2.695 ? ? metalc39 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 212 1_555 ? ? ? ? ? ? ? 2.889 ? ? metalc40 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 215 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc41 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 243 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc42 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 440 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc43 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 8 A HOH 461 1_555 ? ? ? ? ? ? ? 2.687 ? ? metalc44 metalc ? ? J MG . MG ? ? ? 1_555 A G 26 "O2'" ? ? A MG 10 A G 38 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc45 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 10 A HOH 364 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc46 metalc ? ? K MG . MG ? ? ? 1_555 A G 32 OP1 ? ? A MG 11 A G 44 1_555 ? ? ? ? ? ? ? 2.198 ? ? metalc47 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 11 A HOH 302 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc48 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 11 A HOH 411 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc49 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 11 A HOH 412 1_555 ? ? ? ? ? ? ? 2.283 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 71 N3 ? ? A G 13 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 71 O2 ? ? A G 13 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 71 N4 ? ? A G 13 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 70 O2 ? ? A G 14 A U 82 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 70 N3 ? ? A G 14 A U 82 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 69 N1 ? ? A C 15 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 69 O6 ? ? A C 15 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 69 N2 ? ? A C 15 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 68 N1 ? ? A U 16 A A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 68 N6 ? ? A U 16 A A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 5 O2 ? ? ? 1_555 A G 67 N2 ? ? A U 17 A G 79 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog12 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 65 N3 ? ? A A 19 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 65 O4 ? ? A A 19 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 20 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 20 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 63 N3 ? ? A A 21 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 63 O4 ? ? A A 21 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 40 N1 ? ? A U 22 A A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 10 O4 ? ? ? 1_555 A A 40 N6 ? ? A U 22 A A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 11 N1 ? ? ? 1_555 A G 34 N2 ? ? A A 23 A G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog24 hydrog ? ? A A 11 N6 ? ? ? 1_555 A G 34 N3 ? ? A A 23 A G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog25 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 33 N1 ? ? A U 25 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 13 O4 ? ? ? 1_555 A A 33 N6 ? ? A U 25 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 32 N1 ? ? A C 26 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 32 O6 ? ? A C 26 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 32 N2 ? ? A C 26 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 27 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 28 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 28 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 28 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 17 N1 ? ? ? 1_555 A U 29 N3 ? ? A A 29 A U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 17 N6 ? ? ? 1_555 A U 29 O4 ? ? A A 29 A U 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A A 18 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 30 A U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 18 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 30 A U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 19 N3 ? ? ? 1_555 A U 27 O4 ? ? A U 31 A U 39 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog41 hydrog ? ? A U 19 O2 ? ? ? 1_555 A U 27 N3 ? ? A U 31 A U 39 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog42 hydrog ? ? A A 21 N1 ? ? ? 1_555 A A 54 N6 ? ? A A 33 A A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog43 hydrog ? ? A A 21 N6 ? ? ? 1_555 A A 54 N7 ? ? A A 33 A A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog44 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 53 N7 ? ? A U 34 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog45 hydrog ? ? A U 22 O2 ? ? ? 1_555 A A 53 N6 ? ? A U 34 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog46 hydrog ? ? A A 23 N6 ? ? ? 1_555 A A 52 N1 ? ? A A 35 A A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog47 hydrog ? ? A A 23 N7 ? ? ? 1_555 A A 52 N6 ? ? A A 35 A A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog48 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 37 A C 60 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog49 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 26 N2 ? ? ? 1_555 A A 54 N1 ? ? A G 38 A A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog56 hydrog ? ? A G 26 N3 ? ? ? 1_555 A A 54 N6 ? ? A G 38 A A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog57 hydrog ? ? A G 34 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 34 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A U 37 N3 ? ? ? 1_555 A A 64 N3 ? ? A U 49 A A 76 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog61 hydrog ? ? A C 38 N4 ? ? ? 1_555 A U 63 O2 ? ? A C 50 A U 75 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog62 hydrog ? ? A C 42 N3 ? ? ? 1_555 A G 60 N1 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 42 N4 ? ? ? 1_555 A G 60 O6 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 42 O2 ? ? ? 1_555 A G 60 N2 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 43 N1 ? ? ? 1_555 A U 59 N3 ? ? A A 55 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 43 N6 ? ? ? 1_555 A U 59 O4 ? ? A A 55 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 44 N1 ? ? ? 1_555 A U 58 N3 ? ? A A 56 A U 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A A 44 N6 ? ? ? 1_555 A U 58 O4 ? ? A A 56 A U 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 57 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 57 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 57 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 56 N3 ? ? A A 58 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 56 O4 ? ? A A 58 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 47 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 59 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 47 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 59 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 47 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 59 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 49 O2 ? ? ? 1_555 A A 53 N6 ? ? A C 61 A A 65 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1 ? 6 'BINDING SITE FOR RESIDUE MG A 1' AC2 Software A MG 2 ? 6 'BINDING SITE FOR RESIDUE MG A 2' AC3 Software A MG 3 ? 6 'BINDING SITE FOR RESIDUE MG A 3' AC4 Software A MG 4 ? 6 'BINDING SITE FOR RESIDUE MG A 4' AC5 Software A MG 5 ? 5 'BINDING SITE FOR RESIDUE MG A 5' AC6 Software A MG 6 ? 6 'BINDING SITE FOR RESIDUE MG A 6' AC7 Software A MG 7 ? 6 'BINDING SITE FOR RESIDUE MG A 7' AC8 Software A MG 8 ? 6 'BINDING SITE FOR RESIDUE MG A 8' AC9 Software A MG 10 ? 4 'BINDING SITE FOR RESIDUE MG A 10' BC1 Software A MG 11 ? 6 'BINDING SITE FOR RESIDUE MG A 11' BC2 Software A 5AZ 84 ? 8 'BINDING SITE FOR RESIDUE 5AZ A 84' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 A A 12 ? A A 24 . ? 1_555 ? 2 AC1 6 HOH M . ? HOH A 105 . ? 1_555 ? 3 AC1 6 HOH M . ? HOH A 108 . ? 1_555 ? 4 AC1 6 HOH M . ? HOH A 109 . ? 1_555 ? 5 AC1 6 HOH M . ? HOH A 113 . ? 1_555 ? 6 AC1 6 HOH M . ? HOH A 120 . ? 1_555 ? 7 AC2 6 HOH M . ? HOH A 111 . ? 1_554 ? 8 AC2 6 HOH M . ? HOH A 112 . ? 1_554 ? 9 AC2 6 HOH M . ? HOH A 117 . ? 1_555 ? 10 AC2 6 HOH M . ? HOH A 118 . ? 1_555 ? 11 AC2 6 HOH M . ? HOH A 395 . ? 1_555 ? 12 AC2 6 HOH M . ? HOH A 442 . ? 1_555 ? 13 AC3 6 HOH M . ? HOH A 104 . ? 1_555 ? 14 AC3 6 HOH M . ? HOH A 106 . ? 1_555 ? 15 AC3 6 HOH M . ? HOH A 110 . ? 1_555 ? 16 AC3 6 HOH M . ? HOH A 114 . ? 1_555 ? 17 AC3 6 HOH M . ? HOH A 356 . ? 1_555 ? 18 AC3 6 HOH M . ? HOH A 382 . ? 1_555 ? 19 AC4 6 A A 11 ? A A 23 . ? 1_555 ? 20 AC4 6 A A 12 ? A A 24 . ? 1_555 ? 21 AC4 6 HOH M . ? HOH A 128 . ? 1_555 ? 22 AC4 6 HOH M . ? HOH A 200 . ? 1_555 ? 23 AC4 6 HOH M . ? HOH A 410 . ? 1_555 ? 24 AC4 6 HOH M . ? HOH A 416 . ? 1_555 ? 25 AC5 5 U A 56 ? U A 68 . ? 1_555 ? 26 AC5 5 HOH M . ? HOH A 147 . ? 1_555 ? 27 AC5 5 HOH M . ? HOH A 155 . ? 1_555 ? 28 AC5 5 HOH M . ? HOH A 378 . ? 1_555 ? 29 AC5 5 HOH M . ? HOH A 435 . ? 1_555 ? 30 AC6 6 G A 31 ? G A 43 . ? 2_555 ? 31 AC6 6 C A 39 ? C A 51 . ? 1_555 ? 32 AC6 6 HOH M . ? HOH A 107 . ? 1_555 ? 33 AC6 6 HOH M . ? HOH A 116 . ? 1_555 ? 34 AC6 6 HOH M . ? HOH A 374 . ? 1_555 ? 35 AC6 6 HOH M . ? HOH A 418 . ? 2_555 ? 36 AC7 6 A A 11 ? A A 23 . ? 1_555 ? 37 AC7 6 HOH M . ? HOH A 127 . ? 1_555 ? 38 AC7 6 HOH M . ? HOH A 143 . ? 1_555 ? 39 AC7 6 HOH M . ? HOH A 160 . ? 1_555 ? 40 AC7 6 HOH M . ? HOH A 165 . ? 1_555 ? 41 AC7 6 HOH M . ? HOH A 241 . ? 1_555 ? 42 AC8 6 HOH M . ? HOH A 95 . ? 1_555 ? 43 AC8 6 HOH M . ? HOH A 212 . ? 1_555 ? 44 AC8 6 HOH M . ? HOH A 215 . ? 1_555 ? 45 AC8 6 HOH M . ? HOH A 243 . ? 1_555 ? 46 AC8 6 HOH M . ? HOH A 440 . ? 1_555 ? 47 AC8 6 HOH M . ? HOH A 461 . ? 1_555 ? 48 AC9 4 G A 20 ? G A 32 . ? 1_555 ? 49 AC9 4 A A 21 ? A A 33 . ? 1_555 ? 50 AC9 4 G A 26 ? G A 38 . ? 1_555 ? 51 AC9 4 HOH M . ? HOH A 364 . ? 1_555 ? 52 BC1 6 HOH M . ? HOH A 9 . ? 2_555 ? 53 BC1 6 G A 32 ? G A 44 . ? 1_555 ? 54 BC1 6 HOH M . ? HOH A 191 . ? 2_555 ? 55 BC1 6 HOH M . ? HOH A 302 . ? 1_555 ? 56 BC1 6 HOH M . ? HOH A 411 . ? 1_555 ? 57 BC1 6 HOH M . ? HOH A 412 . ? 1_555 ? 58 BC2 8 A A 9 ? A A 21 . ? 1_555 ? 59 BC2 8 U A 10 ? U A 22 . ? 1_555 ? 60 BC2 8 C A 39 ? C A 51 . ? 1_555 ? 61 BC2 8 A A 40 ? A A 52 . ? 1_555 ? 62 BC2 8 A A 61 ? A A 73 . ? 1_555 ? 63 BC2 8 C A 62 ? C A 74 . ? 1_555 ? 64 BC2 8 U A 63 ? U A 75 . ? 1_555 ? 65 BC2 8 HOH M . ? HOH A 132 . ? 1_555 ? # _atom_sites.entry_id 3LA5 _atom_sites.fract_transf_matrix[1][1] 0.014960 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007993 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040016 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 13 13 G G A . n A 1 2 G 2 14 14 G G A . n A 1 3 C 3 15 15 C C A . n A 1 4 U 4 16 16 U U A . n A 1 5 U 5 17 17 U U A . n A 1 6 C 6 18 18 C C A . n A 1 7 A 7 19 19 A A A . n A 1 8 U 8 20 20 U U A . n A 1 9 A 9 21 21 A A A . n A 1 10 U 10 22 22 U U A . n A 1 11 A 11 23 23 A A A . n A 1 12 A 12 24 24 A A A . n A 1 13 U 13 25 25 U U A . n A 1 14 C 14 26 26 C C A . n A 1 15 C 15 27 27 C C A . n A 1 16 G 16 28 28 G G A . n A 1 17 A 17 29 29 A A A . n A 1 18 A 18 30 30 A A A . n A 1 19 U 19 31 31 U U A . n A 1 20 G 20 32 32 G G A . n A 1 21 A 21 33 33 A A A . n A 1 22 U 22 34 34 U U A . n A 1 23 A 23 35 35 A A A . n A 1 24 U 24 36 36 U U A . n A 1 25 G 25 37 37 G G A . n A 1 26 G 26 38 38 G G A . n A 1 27 U 27 39 39 U U A . n A 1 28 U 28 40 40 U U A . n A 1 29 U 29 41 41 U U A . n A 1 30 C 30 42 42 C C A . n A 1 31 G 31 43 43 G G A . n A 1 32 G 32 44 44 G G A . n A 1 33 A 33 45 45 A A A . n A 1 34 G 34 46 46 G G A . n A 1 35 C 35 47 47 C C A . n A 1 36 U 36 48 48 U U A . n A 1 37 U 37 49 49 U U A . n A 1 38 C 38 50 50 C C A . n A 1 39 C 39 51 51 C C A . n A 1 40 A 40 52 52 A A A . n A 1 41 C 41 53 53 C C A . n A 1 42 C 42 54 54 C C A . n A 1 43 A 43 55 55 A A A . n A 1 44 A 44 56 56 A A A . n A 1 45 G 45 57 57 G G A . n A 1 46 A 46 58 58 A A A . n A 1 47 G 47 59 59 G G A . n A 1 48 C 48 60 60 C C A . n A 1 49 C 49 61 61 C C A . n A 1 50 U 50 62 62 U U A . n A 1 51 U 51 63 63 U U A . n A 1 52 A 52 64 64 A A A . n A 1 53 A 53 65 65 A A A . n A 1 54 A 54 66 66 A A A . n A 1 55 C 55 67 67 C C A . n A 1 56 U 56 68 68 U U A . n A 1 57 C 57 69 69 C C A . n A 1 58 U 58 70 70 U U A . n A 1 59 U 59 71 71 U U A . n A 1 60 G 60 72 72 G G A . n A 1 61 A 61 73 73 A A A . n A 1 62 C 62 74 74 C C A . n A 1 63 U 63 75 75 U U A . n A 1 64 A 64 76 76 A A A . n A 1 65 U 65 77 77 U U A . n A 1 66 G 66 78 78 G G A . n A 1 67 G 67 79 79 G G A . n A 1 68 A 68 80 80 A A A . n A 1 69 G 69 81 81 G G A . n A 1 70 U 70 82 82 U U A . n A 1 71 C 71 83 83 C C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1 1 MG MG A . C 2 MG 1 2 2 MG MG A . D 2 MG 1 3 3 MG MG A . E 2 MG 1 4 4 MG MG A . F 2 MG 1 5 5 MG MG A . G 2 MG 1 6 6 MG MG A . H 2 MG 1 7 7 MG MG A . I 2 MG 1 8 8 MG MG A . J 2 MG 1 10 10 MG MG A . K 2 MG 1 11 11 MG MG A . L 3 5AZ 1 84 1 5AZ 5AZ A . M 4 HOH 1 9 9 HOH HOH A . M 4 HOH 2 12 12 HOH HOH A . M 4 HOH 3 85 85 HOH HOH A . M 4 HOH 4 86 86 HOH HOH A . M 4 HOH 5 87 87 HOH HOH A . M 4 HOH 6 88 88 HOH HOH A . M 4 HOH 7 89 89 HOH HOH A . M 4 HOH 8 90 90 HOH HOH A . M 4 HOH 9 91 91 HOH HOH A . M 4 HOH 10 92 92 HOH HOH A . M 4 HOH 11 93 93 HOH HOH A . M 4 HOH 12 94 94 HOH HOH A . M 4 HOH 13 95 95 HOH HOH A . M 4 HOH 14 96 96 HOH HOH A . M 4 HOH 15 97 97 HOH HOH A . M 4 HOH 16 98 98 HOH HOH A . M 4 HOH 17 99 99 HOH HOH A . M 4 HOH 18 100 100 HOH HOH A . M 4 HOH 19 101 101 HOH HOH A . M 4 HOH 20 102 102 HOH HOH A . M 4 HOH 21 103 103 HOH HOH A . M 4 HOH 22 104 104 HOH HOH A . M 4 HOH 23 105 105 HOH HOH A . M 4 HOH 24 106 106 HOH HOH A . M 4 HOH 25 107 107 HOH HOH A . M 4 HOH 26 108 108 HOH HOH A . M 4 HOH 27 109 109 HOH HOH A . M 4 HOH 28 110 110 HOH HOH A . M 4 HOH 29 111 111 HOH HOH A . M 4 HOH 30 112 112 HOH HOH A . M 4 HOH 31 113 113 HOH HOH A . M 4 HOH 32 114 114 HOH HOH A . M 4 HOH 33 115 115 HOH HOH A . M 4 HOH 34 116 116 HOH HOH A . M 4 HOH 35 117 117 HOH HOH A . M 4 HOH 36 118 118 HOH HOH A . M 4 HOH 37 119 119 HOH HOH A . M 4 HOH 38 120 120 HOH HOH A . M 4 HOH 39 121 121 HOH HOH A . M 4 HOH 40 122 122 HOH HOH A . M 4 HOH 41 123 123 HOH HOH A . M 4 HOH 42 124 124 HOH HOH A . M 4 HOH 43 125 125 HOH HOH A . M 4 HOH 44 126 126 HOH HOH A . M 4 HOH 45 127 127 HOH HOH A . M 4 HOH 46 128 128 HOH HOH A . M 4 HOH 47 129 129 HOH HOH A . M 4 HOH 48 130 130 HOH HOH A . M 4 HOH 49 131 131 HOH HOH A . M 4 HOH 50 132 132 HOH HOH A . M 4 HOH 51 133 133 HOH HOH A . M 4 HOH 52 134 134 HOH HOH A . M 4 HOH 53 135 135 HOH HOH A . M 4 HOH 54 136 136 HOH HOH A . M 4 HOH 55 137 137 HOH HOH A . M 4 HOH 56 138 138 HOH HOH A . M 4 HOH 57 139 139 HOH HOH A . M 4 HOH 58 140 140 HOH HOH A . M 4 HOH 59 141 141 HOH HOH A . M 4 HOH 60 142 142 HOH HOH A . M 4 HOH 61 143 143 HOH HOH A . M 4 HOH 62 144 144 HOH HOH A . M 4 HOH 63 145 145 HOH HOH A . M 4 HOH 64 146 146 HOH HOH A . M 4 HOH 65 147 147 HOH HOH A . M 4 HOH 66 148 148 HOH HOH A . M 4 HOH 67 149 149 HOH HOH A . M 4 HOH 68 150 150 HOH HOH A . M 4 HOH 69 151 151 HOH HOH A . M 4 HOH 70 152 152 HOH HOH A . M 4 HOH 71 153 153 HOH HOH A . M 4 HOH 72 154 154 HOH HOH A . M 4 HOH 73 155 155 HOH HOH A . M 4 HOH 74 156 156 HOH HOH A . M 4 HOH 75 157 157 HOH HOH A . M 4 HOH 76 158 158 HOH HOH A . M 4 HOH 77 159 159 HOH HOH A . M 4 HOH 78 160 160 HOH HOH A . M 4 HOH 79 161 161 HOH HOH A . M 4 HOH 80 162 162 HOH HOH A . M 4 HOH 81 163 163 HOH HOH A . M 4 HOH 82 164 164 HOH HOH A . M 4 HOH 83 165 165 HOH HOH A . M 4 HOH 84 166 166 HOH HOH A . M 4 HOH 85 167 167 HOH HOH A . M 4 HOH 86 168 168 HOH HOH A . M 4 HOH 87 169 169 HOH HOH A . M 4 HOH 88 170 170 HOH HOH A . M 4 HOH 89 171 171 HOH HOH A . M 4 HOH 90 172 172 HOH HOH A . M 4 HOH 91 173 1 HOH HOH A . M 4 HOH 92 174 174 HOH HOH A . M 4 HOH 93 175 175 HOH HOH A . M 4 HOH 94 176 176 HOH HOH A . M 4 HOH 95 177 177 HOH HOH A . M 4 HOH 96 178 178 HOH HOH A . M 4 HOH 97 179 179 HOH HOH A . M 4 HOH 98 180 2 HOH HOH A . M 4 HOH 99 181 181 HOH HOH A . M 4 HOH 100 182 182 HOH HOH A . M 4 HOH 101 183 183 HOH HOH A . M 4 HOH 102 184 184 HOH HOH A . M 4 HOH 103 185 185 HOH HOH A . M 4 HOH 104 186 186 HOH HOH A . M 4 HOH 105 187 187 HOH HOH A . M 4 HOH 106 188 188 HOH HOH A . M 4 HOH 107 189 189 HOH HOH A . M 4 HOH 108 190 190 HOH HOH A . M 4 HOH 109 191 191 HOH HOH A . M 4 HOH 110 192 192 HOH HOH A . M 4 HOH 111 193 193 HOH HOH A . M 4 HOH 112 194 194 HOH HOH A . M 4 HOH 113 195 195 HOH HOH A . M 4 HOH 114 196 196 HOH HOH A . M 4 HOH 115 197 3 HOH HOH A . M 4 HOH 116 198 198 HOH HOH A . M 4 HOH 117 199 199 HOH HOH A . M 4 HOH 118 200 200 HOH HOH A . M 4 HOH 119 201 201 HOH HOH A . M 4 HOH 120 202 4 HOH HOH A . M 4 HOH 121 203 203 HOH HOH A . M 4 HOH 122 204 204 HOH HOH A . M 4 HOH 123 205 205 HOH HOH A . M 4 HOH 124 206 206 HOH HOH A . M 4 HOH 125 207 207 HOH HOH A . M 4 HOH 126 208 208 HOH HOH A . M 4 HOH 127 209 209 HOH HOH A . M 4 HOH 128 210 210 HOH HOH A . M 4 HOH 129 211 211 HOH HOH A . M 4 HOH 130 212 212 HOH HOH A . M 4 HOH 131 213 213 HOH HOH A . M 4 HOH 132 214 214 HOH HOH A . M 4 HOH 133 215 215 HOH HOH A . M 4 HOH 134 216 216 HOH HOH A . M 4 HOH 135 217 217 HOH HOH A . M 4 HOH 136 218 218 HOH HOH A . M 4 HOH 137 219 219 HOH HOH A . M 4 HOH 138 220 220 HOH HOH A . M 4 HOH 139 221 221 HOH HOH A . M 4 HOH 140 222 222 HOH HOH A . M 4 HOH 141 223 223 HOH HOH A . M 4 HOH 142 224 224 HOH HOH A . M 4 HOH 143 225 225 HOH HOH A . M 4 HOH 144 226 226 HOH HOH A . M 4 HOH 145 227 227 HOH HOH A . M 4 HOH 146 228 228 HOH HOH A . M 4 HOH 147 229 229 HOH HOH A . M 4 HOH 148 230 230 HOH HOH A . M 4 HOH 149 231 231 HOH HOH A . M 4 HOH 150 232 232 HOH HOH A . M 4 HOH 151 233 233 HOH HOH A . M 4 HOH 152 234 234 HOH HOH A . M 4 HOH 153 235 235 HOH HOH A . M 4 HOH 154 236 236 HOH HOH A . M 4 HOH 155 237 237 HOH HOH A . M 4 HOH 156 238 238 HOH HOH A . M 4 HOH 157 239 239 HOH HOH A . M 4 HOH 158 240 240 HOH HOH A . M 4 HOH 159 241 241 HOH HOH A . M 4 HOH 160 242 242 HOH HOH A . M 4 HOH 161 243 243 HOH HOH A . M 4 HOH 162 244 244 HOH HOH A . M 4 HOH 163 245 245 HOH HOH A . M 4 HOH 164 246 246 HOH HOH A . M 4 HOH 165 247 247 HOH HOH A . M 4 HOH 166 248 248 HOH HOH A . M 4 HOH 167 249 249 HOH HOH A . M 4 HOH 168 250 250 HOH HOH A . M 4 HOH 169 251 251 HOH HOH A . M 4 HOH 170 252 252 HOH HOH A . M 4 HOH 171 253 253 HOH HOH A . M 4 HOH 172 254 254 HOH HOH A . M 4 HOH 173 255 255 HOH HOH A . M 4 HOH 174 256 256 HOH HOH A . M 4 HOH 175 257 257 HOH HOH A . M 4 HOH 176 258 5 HOH HOH A . M 4 HOH 177 259 6 HOH HOH A . M 4 HOH 178 260 260 HOH HOH A . M 4 HOH 179 261 261 HOH HOH A . M 4 HOH 180 262 262 HOH HOH A . M 4 HOH 181 263 263 HOH HOH A . M 4 HOH 182 264 264 HOH HOH A . M 4 HOH 183 265 265 HOH HOH A . M 4 HOH 184 266 266 HOH HOH A . M 4 HOH 185 267 267 HOH HOH A . M 4 HOH 186 268 268 HOH HOH A . M 4 HOH 187 269 7 HOH HOH A . M 4 HOH 188 270 270 HOH HOH A . M 4 HOH 189 271 271 HOH HOH A . M 4 HOH 190 272 272 HOH HOH A . M 4 HOH 191 273 273 HOH HOH A . M 4 HOH 192 274 274 HOH HOH A . M 4 HOH 193 275 275 HOH HOH A . M 4 HOH 194 276 276 HOH HOH A . M 4 HOH 195 277 277 HOH HOH A . M 4 HOH 196 278 278 HOH HOH A . M 4 HOH 197 279 279 HOH HOH A . M 4 HOH 198 280 280 HOH HOH A . M 4 HOH 199 281 281 HOH HOH A . M 4 HOH 200 282 282 HOH HOH A . M 4 HOH 201 283 283 HOH HOH A . M 4 HOH 202 284 284 HOH HOH A . M 4 HOH 203 285 285 HOH HOH A . M 4 HOH 204 286 286 HOH HOH A . M 4 HOH 205 287 287 HOH HOH A . M 4 HOH 206 288 8 HOH HOH A . M 4 HOH 207 289 10 HOH HOH A . M 4 HOH 208 290 290 HOH HOH A . M 4 HOH 209 291 291 HOH HOH A . M 4 HOH 210 292 11 HOH HOH A . M 4 HOH 211 293 13 HOH HOH A . M 4 HOH 212 294 294 HOH HOH A . M 4 HOH 213 295 295 HOH HOH A . M 4 HOH 214 296 296 HOH HOH A . M 4 HOH 215 297 297 HOH HOH A . M 4 HOH 216 298 14 HOH HOH A . M 4 HOH 217 299 299 HOH HOH A . M 4 HOH 218 300 300 HOH HOH A . M 4 HOH 219 301 301 HOH HOH A . M 4 HOH 220 302 302 HOH HOH A . M 4 HOH 221 303 303 HOH HOH A . M 4 HOH 222 304 304 HOH HOH A . M 4 HOH 223 305 305 HOH HOH A . M 4 HOH 224 306 306 HOH HOH A . M 4 HOH 225 307 307 HOH HOH A . M 4 HOH 226 308 15 HOH HOH A . M 4 HOH 227 309 309 HOH HOH A . M 4 HOH 228 310 310 HOH HOH A . M 4 HOH 229 311 311 HOH HOH A . M 4 HOH 230 312 312 HOH HOH A . M 4 HOH 231 313 313 HOH HOH A . M 4 HOH 232 314 314 HOH HOH A . M 4 HOH 233 315 315 HOH HOH A . M 4 HOH 234 316 316 HOH HOH A . M 4 HOH 235 317 317 HOH HOH A . M 4 HOH 236 318 318 HOH HOH A . M 4 HOH 237 319 319 HOH HOH A . M 4 HOH 238 320 320 HOH HOH A . M 4 HOH 239 321 321 HOH HOH A . M 4 HOH 240 322 322 HOH HOH A . M 4 HOH 241 323 323 HOH HOH A . M 4 HOH 242 324 324 HOH HOH A . M 4 HOH 243 325 16 HOH HOH A . M 4 HOH 244 326 326 HOH HOH A . M 4 HOH 245 327 327 HOH HOH A . M 4 HOH 246 328 328 HOH HOH A . M 4 HOH 247 329 17 HOH HOH A . M 4 HOH 248 330 330 HOH HOH A . M 4 HOH 249 331 331 HOH HOH A . M 4 HOH 250 332 332 HOH HOH A . M 4 HOH 251 333 333 HOH HOH A . M 4 HOH 252 334 334 HOH HOH A . M 4 HOH 253 335 335 HOH HOH A . M 4 HOH 254 336 336 HOH HOH A . M 4 HOH 255 337 337 HOH HOH A . M 4 HOH 256 338 338 HOH HOH A . M 4 HOH 257 339 339 HOH HOH A . M 4 HOH 258 340 18 HOH HOH A . M 4 HOH 259 341 341 HOH HOH A . M 4 HOH 260 342 342 HOH HOH A . M 4 HOH 261 343 343 HOH HOH A . M 4 HOH 262 344 344 HOH HOH A . M 4 HOH 263 345 345 HOH HOH A . M 4 HOH 264 346 346 HOH HOH A . M 4 HOH 265 347 347 HOH HOH A . M 4 HOH 266 348 19 HOH HOH A . M 4 HOH 267 349 349 HOH HOH A . M 4 HOH 268 350 350 HOH HOH A . M 4 HOH 269 351 20 HOH HOH A . M 4 HOH 270 352 352 HOH HOH A . M 4 HOH 271 353 353 HOH HOH A . M 4 HOH 272 354 354 HOH HOH A . M 4 HOH 273 355 355 HOH HOH A . M 4 HOH 274 356 21 HOH HOH A . M 4 HOH 275 357 357 HOH HOH A . M 4 HOH 276 358 22 HOH HOH A . M 4 HOH 277 359 359 HOH HOH A . M 4 HOH 278 360 360 HOH HOH A . M 4 HOH 279 361 361 HOH HOH A . M 4 HOH 280 362 362 HOH HOH A . M 4 HOH 281 363 363 HOH HOH A . M 4 HOH 282 364 364 HOH HOH A . M 4 HOH 283 365 365 HOH HOH A . M 4 HOH 284 366 366 HOH HOH A . M 4 HOH 285 367 367 HOH HOH A . M 4 HOH 286 368 23 HOH HOH A . M 4 HOH 287 369 369 HOH HOH A . M 4 HOH 288 370 370 HOH HOH A . M 4 HOH 289 371 371 HOH HOH A . M 4 HOH 290 372 24 HOH HOH A . M 4 HOH 291 373 373 HOH HOH A . M 4 HOH 292 374 25 HOH HOH A . M 4 HOH 293 375 375 HOH HOH A . M 4 HOH 294 376 376 HOH HOH A . M 4 HOH 295 377 377 HOH HOH A . M 4 HOH 296 378 378 HOH HOH A . M 4 HOH 297 379 379 HOH HOH A . M 4 HOH 298 380 380 HOH HOH A . M 4 HOH 299 381 381 HOH HOH A . M 4 HOH 300 382 26 HOH HOH A . M 4 HOH 301 383 28 HOH HOH A . M 4 HOH 302 384 384 HOH HOH A . M 4 HOH 303 385 29 HOH HOH A . M 4 HOH 304 386 30 HOH HOH A . M 4 HOH 305 387 387 HOH HOH A . M 4 HOH 306 388 388 HOH HOH A . M 4 HOH 307 389 389 HOH HOH A . M 4 HOH 308 390 390 HOH HOH A . M 4 HOH 309 391 391 HOH HOH A . M 4 HOH 310 392 31 HOH HOH A . M 4 HOH 311 393 393 HOH HOH A . M 4 HOH 312 394 394 HOH HOH A . M 4 HOH 313 395 32 HOH HOH A . M 4 HOH 314 396 396 HOH HOH A . M 4 HOH 315 397 397 HOH HOH A . M 4 HOH 316 398 398 HOH HOH A . M 4 HOH 317 399 399 HOH HOH A . M 4 HOH 318 400 400 HOH HOH A . M 4 HOH 319 401 401 HOH HOH A . M 4 HOH 320 402 402 HOH HOH A . M 4 HOH 321 403 403 HOH HOH A . M 4 HOH 322 404 404 HOH HOH A . M 4 HOH 323 405 405 HOH HOH A . M 4 HOH 324 406 406 HOH HOH A . M 4 HOH 325 407 407 HOH HOH A . M 4 HOH 326 408 408 HOH HOH A . M 4 HOH 327 409 409 HOH HOH A . M 4 HOH 328 410 410 HOH HOH A . M 4 HOH 329 411 411 HOH HOH A . M 4 HOH 330 412 412 HOH HOH A . M 4 HOH 331 413 33 HOH HOH A . M 4 HOH 332 414 34 HOH HOH A . M 4 HOH 333 415 35 HOH HOH A . M 4 HOH 334 416 36 HOH HOH A . M 4 HOH 335 417 37 HOH HOH A . M 4 HOH 336 418 38 HOH HOH A . M 4 HOH 337 419 39 HOH HOH A . M 4 HOH 338 420 40 HOH HOH A . M 4 HOH 339 421 41 HOH HOH A . M 4 HOH 340 422 42 HOH HOH A . M 4 HOH 341 423 43 HOH HOH A . M 4 HOH 342 424 44 HOH HOH A . M 4 HOH 343 425 45 HOH HOH A . M 4 HOH 344 426 46 HOH HOH A . M 4 HOH 345 427 47 HOH HOH A . M 4 HOH 346 428 48 HOH HOH A . M 4 HOH 347 429 49 HOH HOH A . M 4 HOH 348 430 50 HOH HOH A . M 4 HOH 349 431 51 HOH HOH A . M 4 HOH 350 432 52 HOH HOH A . M 4 HOH 351 433 53 HOH HOH A . M 4 HOH 352 434 54 HOH HOH A . M 4 HOH 353 435 55 HOH HOH A . M 4 HOH 354 436 56 HOH HOH A . M 4 HOH 355 437 57 HOH HOH A . M 4 HOH 356 438 58 HOH HOH A . M 4 HOH 357 439 59 HOH HOH A . M 4 HOH 358 440 60 HOH HOH A . M 4 HOH 359 441 61 HOH HOH A . M 4 HOH 360 442 62 HOH HOH A . M 4 HOH 361 443 63 HOH HOH A . M 4 HOH 362 444 64 HOH HOH A . M 4 HOH 363 445 65 HOH HOH A . M 4 HOH 364 446 66 HOH HOH A . M 4 HOH 365 447 67 HOH HOH A . M 4 HOH 366 448 68 HOH HOH A . M 4 HOH 367 449 69 HOH HOH A . M 4 HOH 368 450 70 HOH HOH A . M 4 HOH 369 451 71 HOH HOH A . M 4 HOH 370 452 72 HOH HOH A . M 4 HOH 371 453 73 HOH HOH A . M 4 HOH 372 454 74 HOH HOH A . M 4 HOH 373 455 75 HOH HOH A . M 4 HOH 374 456 76 HOH HOH A . M 4 HOH 375 457 77 HOH HOH A . M 4 HOH 376 458 78 HOH HOH A . M 4 HOH 377 459 79 HOH HOH A . M 4 HOH 378 460 80 HOH HOH A . M 4 HOH 379 461 81 HOH HOH A . M 4 HOH 380 462 82 HOH HOH A . M 4 HOH 381 463 83 HOH HOH A . M 4 HOH 382 464 84 HOH HOH A . # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A A 12 ? A A 24 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 105 ? 1_555 92.9 ? 2 OP1 ? A A 12 ? A A 24 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 108 ? 1_555 91.1 ? 3 O ? M HOH . ? A HOH 105 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 108 ? 1_555 92.6 ? 4 OP1 ? A A 12 ? A A 24 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 109 ? 1_555 94.1 ? 5 O ? M HOH . ? A HOH 105 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 109 ? 1_555 91.1 ? 6 O ? M HOH . ? A HOH 108 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 109 ? 1_555 173.5 ? 7 OP1 ? A A 12 ? A A 24 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 113 ? 1_555 176.6 ? 8 O ? M HOH . ? A HOH 105 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 113 ? 1_555 85.2 ? 9 O ? M HOH . ? A HOH 108 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 113 ? 1_555 86.1 ? 10 O ? M HOH . ? A HOH 109 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 113 ? 1_555 88.8 ? 11 OP1 ? A A 12 ? A A 24 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 120 ? 1_555 88.5 ? 12 O ? M HOH . ? A HOH 105 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 120 ? 1_555 175.9 ? 13 O ? M HOH . ? A HOH 108 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 120 ? 1_555 91.3 ? 14 O ? M HOH . ? A HOH 109 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 120 ? 1_555 84.9 ? 15 O ? M HOH . ? A HOH 113 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? M HOH . ? A HOH 120 ? 1_555 93.6 ? 16 O ? M HOH . ? A HOH 117 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 118 ? 1_555 86.9 ? 17 O ? M HOH . ? A HOH 117 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 395 ? 1_555 88.8 ? 18 O ? M HOH . ? A HOH 118 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 395 ? 1_555 87.1 ? 19 O ? M HOH . ? A HOH 117 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 442 ? 1_555 86.5 ? 20 O ? M HOH . ? A HOH 118 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 442 ? 1_555 173.1 ? 21 O ? M HOH . ? A HOH 395 ? 1_555 MG ? C MG . ? A MG 2 ? 1_555 O ? M HOH . ? A HOH 442 ? 1_555 95.0 ? 22 O ? M HOH . ? A HOH 104 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 106 ? 1_555 87.9 ? 23 O ? M HOH . ? A HOH 104 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 110 ? 1_555 172.8 ? 24 O ? M HOH . ? A HOH 106 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 110 ? 1_555 85.0 ? 25 O ? M HOH . ? A HOH 104 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 114 ? 1_555 85.9 ? 26 O ? M HOH . ? A HOH 106 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 114 ? 1_555 88.3 ? 27 O ? M HOH . ? A HOH 110 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 114 ? 1_555 94.7 ? 28 O ? M HOH . ? A HOH 104 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 356 ? 1_555 93.7 ? 29 O ? M HOH . ? A HOH 106 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 356 ? 1_555 90.7 ? 30 O ? M HOH . ? A HOH 110 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 356 ? 1_555 85.5 ? 31 O ? M HOH . ? A HOH 114 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 356 ? 1_555 178.9 ? 32 O ? M HOH . ? A HOH 104 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 382 ? 1_555 95.1 ? 33 O ? M HOH . ? A HOH 106 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 382 ? 1_555 177.1 ? 34 O ? M HOH . ? A HOH 110 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 382 ? 1_555 92.1 ? 35 O ? M HOH . ? A HOH 114 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 382 ? 1_555 91.5 ? 36 O ? M HOH . ? A HOH 356 ? 1_555 MG ? D MG . ? A MG 3 ? 1_555 O ? M HOH . ? A HOH 382 ? 1_555 89.6 ? 37 OP2 ? A A 11 ? A A 23 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 OP2 ? A A 12 ? A A 24 ? 1_555 104.1 ? 38 OP2 ? A A 11 ? A A 23 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 128 ? 1_555 168.7 ? 39 OP2 ? A A 12 ? A A 24 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 128 ? 1_555 86.9 ? 40 OP2 ? A A 11 ? A A 23 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 200 ? 1_555 90.3 ? 41 OP2 ? A A 12 ? A A 24 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 200 ? 1_555 99.5 ? 42 O ? M HOH . ? A HOH 128 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 200 ? 1_555 85.7 ? 43 OP2 ? A A 11 ? A A 23 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 410 ? 1_555 81.2 ? 44 OP2 ? A A 12 ? A A 24 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 410 ? 1_555 169.5 ? 45 O ? M HOH . ? A HOH 128 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 410 ? 1_555 88.2 ? 46 O ? M HOH . ? A HOH 200 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 410 ? 1_555 89.5 ? 47 OP2 ? A A 11 ? A A 23 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 416 ? 1_555 92.9 ? 48 OP2 ? A A 12 ? A A 24 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 416 ? 1_555 73.7 ? 49 O ? M HOH . ? A HOH 128 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 416 ? 1_555 92.2 ? 50 O ? M HOH . ? A HOH 200 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 416 ? 1_555 173.0 ? 51 O ? M HOH . ? A HOH 410 ? 1_555 MG ? E MG . ? A MG 4 ? 1_555 O ? M HOH . ? A HOH 416 ? 1_555 97.2 ? 52 OP1 ? A U 56 ? A U 68 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 147 ? 1_555 96.8 ? 53 OP1 ? A U 56 ? A U 68 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 155 ? 1_555 91.9 ? 54 O ? M HOH . ? A HOH 147 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 155 ? 1_555 171.2 ? 55 OP1 ? A U 56 ? A U 68 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 378 ? 1_555 86.9 ? 56 O ? M HOH . ? A HOH 147 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 378 ? 1_555 73.8 ? 57 O ? M HOH . ? A HOH 155 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 378 ? 1_555 107.9 ? 58 OP1 ? A U 56 ? A U 68 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 435 ? 1_555 170.7 ? 59 O ? M HOH . ? A HOH 147 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 435 ? 1_555 88.0 ? 60 O ? M HOH . ? A HOH 155 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 435 ? 1_555 83.5 ? 61 O ? M HOH . ? A HOH 378 ? 1_555 MG ? F MG . ? A MG 5 ? 1_555 O ? M HOH . ? A HOH 435 ? 1_555 86.7 ? 62 OP1 ? A C 39 ? A C 51 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 107 ? 1_555 96.1 ? 63 OP1 ? A C 39 ? A C 51 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 116 ? 1_555 173.0 ? 64 O ? M HOH . ? A HOH 107 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 116 ? 1_555 87.2 ? 65 OP1 ? A C 39 ? A C 51 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 374 ? 1_555 88.6 ? 66 O ? M HOH . ? A HOH 107 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 374 ? 1_555 86.2 ? 67 O ? M HOH . ? A HOH 116 ? 1_555 MG ? G MG . ? A MG 6 ? 1_555 O ? M HOH . ? A HOH 374 ? 1_555 85.5 ? 68 OP1 ? A A 11 ? A A 23 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 127 ? 1_555 83.7 ? 69 OP1 ? A A 11 ? A A 23 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 143 ? 1_555 171.4 ? 70 O ? M HOH . ? A HOH 127 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 143 ? 1_555 88.2 ? 71 OP1 ? A A 11 ? A A 23 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 160 ? 1_555 90.4 ? 72 O ? M HOH . ? A HOH 127 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 160 ? 1_555 89.7 ? 73 O ? M HOH . ? A HOH 143 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 160 ? 1_555 86.3 ? 74 OP1 ? A A 11 ? A A 23 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 165 ? 1_555 83.2 ? 75 O ? M HOH . ? A HOH 127 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 165 ? 1_555 82.3 ? 76 O ? M HOH . ? A HOH 143 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 165 ? 1_555 98.9 ? 77 O ? M HOH . ? A HOH 160 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 165 ? 1_555 170.2 ? 78 OP1 ? A A 11 ? A A 23 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 86.7 ? 79 O ? M HOH . ? A HOH 127 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 166.8 ? 80 O ? M HOH . ? A HOH 143 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 101.8 ? 81 O ? M HOH . ? A HOH 160 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 99.5 ? 82 O ? M HOH . ? A HOH 165 ? 1_555 MG ? H MG . ? A MG 7 ? 1_555 O ? M HOH . ? A HOH 241 ? 1_555 87.6 ? 83 O ? M HOH . ? A HOH 95 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 212 ? 1_555 134.3 ? 84 O ? M HOH . ? A HOH 95 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 215 ? 1_555 94.8 ? 85 O ? M HOH . ? A HOH 212 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 215 ? 1_555 124.8 ? 86 O ? M HOH . ? A HOH 95 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 140.8 ? 87 O ? M HOH . ? A HOH 212 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 76.7 ? 88 O ? M HOH . ? A HOH 215 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 76.7 ? 89 O ? M HOH . ? A HOH 95 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 440 ? 1_555 78.4 ? 90 O ? M HOH . ? A HOH 212 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 440 ? 1_555 89.3 ? 91 O ? M HOH . ? A HOH 215 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 440 ? 1_555 75.9 ? 92 O ? M HOH . ? A HOH 243 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 440 ? 1_555 133.5 ? 93 O ? M HOH . ? A HOH 95 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 461 ? 1_555 154.1 ? 94 O ? M HOH . ? A HOH 212 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 461 ? 1_555 52.6 ? 95 O ? M HOH . ? A HOH 215 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 461 ? 1_555 72.2 ? 96 O ? M HOH . ? A HOH 243 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 461 ? 1_555 59.4 ? 97 O ? M HOH . ? A HOH 440 ? 1_555 MG ? I MG . ? A MG 8 ? 1_555 O ? M HOH . ? A HOH 461 ? 1_555 76.7 ? 98 "O2'" ? A G 26 ? A G 38 ? 1_555 MG ? J MG . ? A MG 10 ? 1_555 O ? M HOH . ? A HOH 364 ? 1_555 163.7 ? 99 OP1 ? A G 32 ? A G 44 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 302 ? 1_555 83.5 ? 100 OP1 ? A G 32 ? A G 44 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 411 ? 1_555 89.0 ? 101 O ? M HOH . ? A HOH 302 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 411 ? 1_555 104.3 ? 102 OP1 ? A G 32 ? A G 44 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 412 ? 1_555 171.5 ? 103 O ? M HOH . ? A HOH 302 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 412 ? 1_555 98.1 ? 104 O ? M HOH . ? A HOH 411 ? 1_555 MG ? K MG . ? A MG 11 ? 1_555 O ? M HOH . ? A HOH 412 ? 1_555 98.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.value' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX 1.5_2 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 DNA . ? ? ? ? 'data collection' ? ? ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 XSCALE . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3LA5 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'U OF 47TH, 51TH AND 74TH WERE ENGINEERED TO C.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A G 38 ? ? "C1'" A G 38 ? ? N9 A G 38 ? ? 113.79 108.50 5.29 0.70 N 2 1 "C1'" A U 62 ? ? "O4'" A U 62 ? ? "C4'" A U 62 ? ? 103.75 109.70 -5.95 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5AZ C1 C N N 1 5AZ N2 N N N 2 5AZ C3 C N N 3 5AZ N4 N N N 4 5AZ C5 C N N 5 5AZ N6 N N N 6 5AZ N7 N N N 7 5AZ O8 O N N 8 5AZ HN2 H N N 9 5AZ H5 H N N 10 5AZ H1N7 H N N 11 5AZ H2N7 H N N 12 A OP3 O N N 13 A P P N N 14 A OP1 O N N 15 A OP2 O N N 16 A "O5'" O N N 17 A "C5'" C N N 18 A "C4'" C N R 19 A "O4'" O N N 20 A "C3'" C N S 21 A "O3'" O N N 22 A "C2'" C N R 23 A "O2'" O N N 24 A "C1'" C N R 25 A N9 N Y N 26 A C8 C Y N 27 A N7 N Y N 28 A C5 C Y N 29 A C6 C Y N 30 A N6 N N N 31 A N1 N Y N 32 A C2 C Y N 33 A N3 N Y N 34 A C4 C Y N 35 A HOP3 H N N 36 A HOP2 H N N 37 A "H5'" H N N 38 A "H5''" H N N 39 A "H4'" H N N 40 A "H3'" H N N 41 A "HO3'" H N N 42 A "H2'" H N N 43 A "HO2'" H N N 44 A "H1'" H N N 45 A H8 H N N 46 A H61 H N N 47 A H62 H N N 48 A H2 H N N 49 C OP3 O N N 50 C P P N N 51 C OP1 O N N 52 C OP2 O N N 53 C "O5'" O N N 54 C "C5'" C N N 55 C "C4'" C N R 56 C "O4'" O N N 57 C "C3'" C N S 58 C "O3'" O N N 59 C "C2'" C N R 60 C "O2'" O N N 61 C "C1'" C N R 62 C N1 N N N 63 C C2 C N N 64 C O2 O N N 65 C N3 N N N 66 C C4 C N N 67 C N4 N N N 68 C C5 C N N 69 C C6 C N N 70 C HOP3 H N N 71 C HOP2 H N N 72 C "H5'" H N N 73 C "H5''" H N N 74 C "H4'" H N N 75 C "H3'" H N N 76 C "HO3'" H N N 77 C "H2'" H N N 78 C "HO2'" H N N 79 C "H1'" H N N 80 C H41 H N N 81 C H42 H N N 82 C H5 H N N 83 C H6 H N N 84 G OP3 O N N 85 G P P N N 86 G OP1 O N N 87 G OP2 O N N 88 G "O5'" O N N 89 G "C5'" C N N 90 G "C4'" C N R 91 G "O4'" O N N 92 G "C3'" C N S 93 G "O3'" O N N 94 G "C2'" C N R 95 G "O2'" O N N 96 G "C1'" C N R 97 G N9 N Y N 98 G C8 C Y N 99 G N7 N Y N 100 G C5 C Y N 101 G C6 C N N 102 G O6 O N N 103 G N1 N N N 104 G C2 C N N 105 G N2 N N N 106 G N3 N N N 107 G C4 C Y N 108 G HOP3 H N N 109 G HOP2 H N N 110 G "H5'" H N N 111 G "H5''" H N N 112 G "H4'" H N N 113 G "H3'" H N N 114 G "HO3'" H N N 115 G "H2'" H N N 116 G "HO2'" H N N 117 G "H1'" H N N 118 G H8 H N N 119 G H1 H N N 120 G H21 H N N 121 G H22 H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 MG MG MG N N 126 U OP3 O N N 127 U P P N N 128 U OP1 O N N 129 U OP2 O N N 130 U "O5'" O N N 131 U "C5'" C N N 132 U "C4'" C N R 133 U "O4'" O N N 134 U "C3'" C N S 135 U "O3'" O N N 136 U "C2'" C N R 137 U "O2'" O N N 138 U "C1'" C N R 139 U N1 N N N 140 U C2 C N N 141 U O2 O N N 142 U N3 N N N 143 U C4 C N N 144 U O4 O N N 145 U C5 C N N 146 U C6 C N N 147 U HOP3 H N N 148 U HOP2 H N N 149 U "H5'" H N N 150 U "H5''" H N N 151 U "H4'" H N N 152 U "H3'" H N N 153 U "HO3'" H N N 154 U "H2'" H N N 155 U "HO2'" H N N 156 U "H1'" H N N 157 U H3 H N N 158 U H5 H N N 159 U H6 H N N 160 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5AZ C1 N2 sing N N 1 5AZ C1 N6 sing N N 2 5AZ C1 O8 doub N N 3 5AZ N2 C3 sing N N 4 5AZ C3 N4 doub N N 5 5AZ C3 N7 sing N N 6 5AZ N4 C5 sing N N 7 5AZ C5 N6 doub N N 8 5AZ N2 HN2 sing N N 9 5AZ C5 H5 sing N N 10 5AZ N7 H1N7 sing N N 11 5AZ N7 H2N7 sing N N 12 A OP3 P sing N N 13 A OP3 HOP3 sing N N 14 A P OP1 doub N N 15 A P OP2 sing N N 16 A P "O5'" sing N N 17 A OP2 HOP2 sing N N 18 A "O5'" "C5'" sing N N 19 A "C5'" "C4'" sing N N 20 A "C5'" "H5'" sing N N 21 A "C5'" "H5''" sing N N 22 A "C4'" "O4'" sing N N 23 A "C4'" "C3'" sing N N 24 A "C4'" "H4'" sing N N 25 A "O4'" "C1'" sing N N 26 A "C3'" "O3'" sing N N 27 A "C3'" "C2'" sing N N 28 A "C3'" "H3'" sing N N 29 A "O3'" "HO3'" sing N N 30 A "C2'" "O2'" sing N N 31 A "C2'" "C1'" sing N N 32 A "C2'" "H2'" sing N N 33 A "O2'" "HO2'" sing N N 34 A "C1'" N9 sing N N 35 A "C1'" "H1'" sing N N 36 A N9 C8 sing Y N 37 A N9 C4 sing Y N 38 A C8 N7 doub Y N 39 A C8 H8 sing N N 40 A N7 C5 sing Y N 41 A C5 C6 sing Y N 42 A C5 C4 doub Y N 43 A C6 N6 sing N N 44 A C6 N1 doub Y N 45 A N6 H61 sing N N 46 A N6 H62 sing N N 47 A N1 C2 sing Y N 48 A C2 N3 doub Y N 49 A C2 H2 sing N N 50 A N3 C4 sing Y N 51 C OP3 P sing N N 52 C OP3 HOP3 sing N N 53 C P OP1 doub N N 54 C P OP2 sing N N 55 C P "O5'" sing N N 56 C OP2 HOP2 sing N N 57 C "O5'" "C5'" sing N N 58 C "C5'" "C4'" sing N N 59 C "C5'" "H5'" sing N N 60 C "C5'" "H5''" sing N N 61 C "C4'" "O4'" sing N N 62 C "C4'" "C3'" sing N N 63 C "C4'" "H4'" sing N N 64 C "O4'" "C1'" sing N N 65 C "C3'" "O3'" sing N N 66 C "C3'" "C2'" sing N N 67 C "C3'" "H3'" sing N N 68 C "O3'" "HO3'" sing N N 69 C "C2'" "O2'" sing N N 70 C "C2'" "C1'" sing N N 71 C "C2'" "H2'" sing N N 72 C "O2'" "HO2'" sing N N 73 C "C1'" N1 sing N N 74 C "C1'" "H1'" sing N N 75 C N1 C2 sing N N 76 C N1 C6 sing N N 77 C C2 O2 doub N N 78 C C2 N3 sing N N 79 C N3 C4 doub N N 80 C C4 N4 sing N N 81 C C4 C5 sing N N 82 C N4 H41 sing N N 83 C N4 H42 sing N N 84 C C5 C6 doub N N 85 C C5 H5 sing N N 86 C C6 H6 sing N N 87 G OP3 P sing N N 88 G OP3 HOP3 sing N N 89 G P OP1 doub N N 90 G P OP2 sing N N 91 G P "O5'" sing N N 92 G OP2 HOP2 sing N N 93 G "O5'" "C5'" sing N N 94 G "C5'" "C4'" sing N N 95 G "C5'" "H5'" sing N N 96 G "C5'" "H5''" sing N N 97 G "C4'" "O4'" sing N N 98 G "C4'" "C3'" sing N N 99 G "C4'" "H4'" sing N N 100 G "O4'" "C1'" sing N N 101 G "C3'" "O3'" sing N N 102 G "C3'" "C2'" sing N N 103 G "C3'" "H3'" sing N N 104 G "O3'" "HO3'" sing N N 105 G "C2'" "O2'" sing N N 106 G "C2'" "C1'" sing N N 107 G "C2'" "H2'" sing N N 108 G "O2'" "HO2'" sing N N 109 G "C1'" N9 sing N N 110 G "C1'" "H1'" sing N N 111 G N9 C8 sing Y N 112 G N9 C4 sing Y N 113 G C8 N7 doub Y N 114 G C8 H8 sing N N 115 G N7 C5 sing Y N 116 G C5 C6 sing N N 117 G C5 C4 doub Y N 118 G C6 O6 doub N N 119 G C6 N1 sing N N 120 G N1 C2 sing N N 121 G N1 H1 sing N N 122 G C2 N2 sing N N 123 G C2 N3 doub N N 124 G N2 H21 sing N N 125 G N2 H22 sing N N 126 G N3 C4 sing N N 127 HOH O H1 sing N N 128 HOH O H2 sing N N 129 U OP3 P sing N N 130 U OP3 HOP3 sing N N 131 U P OP1 doub N N 132 U P OP2 sing N N 133 U P "O5'" sing N N 134 U OP2 HOP2 sing N N 135 U "O5'" "C5'" sing N N 136 U "C5'" "C4'" sing N N 137 U "C5'" "H5'" sing N N 138 U "C5'" "H5''" sing N N 139 U "C4'" "O4'" sing N N 140 U "C4'" "C3'" sing N N 141 U "C4'" "H4'" sing N N 142 U "O4'" "C1'" sing N N 143 U "C3'" "O3'" sing N N 144 U "C3'" "C2'" sing N N 145 U "C3'" "H3'" sing N N 146 U "O3'" "HO3'" sing N N 147 U "C2'" "O2'" sing N N 148 U "C2'" "C1'" sing N N 149 U "C2'" "H2'" sing N N 150 U "O2'" "HO2'" sing N N 151 U "C1'" N1 sing N N 152 U "C1'" "H1'" sing N N 153 U N1 C2 sing N N 154 U N1 C6 sing N N 155 U C2 O2 doub N N 156 U C2 N3 sing N N 157 U N3 C4 sing N N 158 U N3 H3 sing N N 159 U C4 O4 doub N N 160 U C4 C5 sing N N 161 U C5 C6 doub N N 162 U C5 H5 sing N N 163 U C6 H6 sing N N 164 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3LA5 'double helix' 3LA5 'a-form double helix' 3LA5 'mismatched base pair' 3LA5 'internal loop' 3LA5 'triple helix' 3LA5 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 71 1_555 -0.469 0.054 0.011 -6.627 6.189 -1.730 1 A_G13:C83_A A 13 ? A 83 ? 19 1 1 A G 2 1_555 A U 70 1_555 -2.666 -0.620 0.574 8.933 -12.528 2.492 2 A_G14:U82_A A 14 ? A 82 ? 28 1 1 A C 3 1_555 A G 69 1_555 0.129 -0.206 0.337 6.544 -24.327 1.035 3 A_C15:G81_A A 15 ? A 81 ? 19 1 1 A U 4 1_555 A A 68 1_555 -0.388 -0.231 0.417 -6.447 -19.167 1.552 4 A_U16:A80_A A 16 ? A 80 ? 20 1 1 A U 5 1_555 A G 67 1_555 -0.370 -0.167 -0.118 4.290 -19.683 -1.157 5 A_U17:G79_A A 17 ? A 79 ? ? 1 1 A C 6 1_555 A G 66 1_555 0.099 -0.093 -0.116 5.276 -15.751 1.541 6 A_C18:G78_A A 18 ? A 78 ? 19 1 1 A A 7 1_555 A U 65 1_555 0.076 -0.121 0.045 -5.088 -17.274 1.454 7 A_A19:U77_A A 19 ? A 77 ? 20 1 1 A U 8 1_555 A A 64 1_555 0.073 -0.184 0.002 -10.887 -18.687 4.277 8 A_U20:A76_A A 20 ? A 76 ? 20 1 1 A A 9 1_555 A U 63 1_555 0.044 -0.164 0.198 -5.633 -7.515 1.909 9 A_A21:U75_A A 21 ? A 75 ? 20 1 1 A U 27 1_555 A U 19 1_555 -2.319 -1.799 0.260 -7.290 -24.222 18.377 10 A_U39:U31_A A 39 ? A 31 ? 16 1 1 A U 28 1_555 A A 18 1_555 0.034 -0.076 0.286 -17.520 -10.911 7.823 11 A_U40:A30_A A 40 ? A 30 ? 20 1 1 A U 29 1_555 A A 17 1_555 0.044 -0.069 0.188 -2.037 -9.692 -0.693 12 A_U41:A29_A A 41 ? A 29 ? 20 1 1 A C 30 1_555 A G 16 1_555 0.172 -0.182 0.010 8.608 -14.773 -1.027 13 A_C42:G28_A A 42 ? A 28 ? 19 1 1 A G 31 1_555 A C 15 1_555 -0.314 -0.125 -0.131 -1.313 -8.724 0.517 14 A_G43:C27_A A 43 ? A 27 ? 19 1 1 A G 32 1_555 A C 14 1_555 -0.120 -0.108 0.010 -9.694 -9.797 -0.085 15 A_G44:C26_A A 44 ? A 26 ? 19 1 1 A A 33 1_555 A U 13 1_555 0.133 -0.032 0.194 -5.579 -3.688 -5.196 16 A_A45:U25_A A 45 ? A 25 ? 20 1 1 A G 34 1_555 A C 41 1_555 -0.199 -0.066 -0.391 -24.235 -3.453 -1.985 17 A_G46:C53_A A 46 ? A 53 ? 19 1 1 A U 10 1_555 A A 40 1_555 -0.014 -0.089 -0.058 10.627 -4.839 3.825 18 A_U22:A52_A A 22 ? A 52 ? 20 1 1 A A 23 1_555 A A 52 1_555 -4.092 1.439 0.273 -5.517 3.308 -111.238 19 A_A35:A64_A A 35 ? A 64 ? 5 4 1 A C 49 1_555 A G 25 1_555 0.094 -0.217 0.589 -4.117 -11.627 -3.633 20 A_C61:G37_A A 61 ? A 37 ? 19 1 1 A A 53 1_555 A U 22 1_555 -4.177 -1.931 -0.557 2.368 -11.016 -100.690 21 A_A65:U34_A A 65 ? A 34 ? 24 4 1 A G 26 1_555 A C 48 1_555 -0.017 -0.140 0.424 16.886 -12.352 -2.573 22 A_G38:C60_A A 38 ? A 60 ? 19 1 1 A C 55 1_555 A G 47 1_555 0.238 -0.112 -0.190 13.274 -19.620 1.210 23 A_C67:G59_A A 67 ? A 59 ? 19 1 1 A U 56 1_555 A A 46 1_555 -0.146 -0.137 0.236 -2.335 -12.921 2.263 24 A_U68:A58_A A 68 ? A 58 ? 20 1 1 A C 57 1_555 A G 45 1_555 0.213 -0.165 -0.016 4.293 -17.655 -0.494 25 A_C69:G57_A A 69 ? A 57 ? 19 1 1 A U 58 1_555 A A 44 1_555 -0.090 -0.169 0.229 -6.778 -14.195 -0.001 26 A_U70:A56_A A 70 ? A 56 ? 20 1 1 A U 59 1_555 A A 43 1_555 0.060 -0.182 0.201 1.514 -8.789 3.854 27 A_U71:A55_A A 71 ? A 55 ? 20 1 1 A G 60 1_555 A C 42 1_555 -0.234 -0.158 0.142 10.207 -9.875 -1.655 28 A_G72:C54_A A 72 ? A 54 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 71 1_555 A G 2 1_555 A U 70 1_555 0.500 -2.083 2.540 -7.742 12.629 24.771 -5.911 -2.061 1.159 26.615 16.315 28.803 1 AA_G13G14:U82C83_AA A 13 ? A 83 ? A 14 ? A 82 ? 1 A G 2 1_555 A U 70 1_555 A C 3 1_555 A G 69 1_555 -0.574 -1.271 3.211 -0.552 7.892 41.947 -2.501 0.737 2.943 10.907 0.762 42.653 2 AA_G14C15:G81U82_AA A 14 ? A 82 ? A 15 ? A 81 ? 1 A C 3 1_555 A G 69 1_555 A U 4 1_555 A A 68 1_555 -0.413 -1.522 3.322 -3.693 10.718 30.620 -4.480 0.126 2.682 19.478 6.711 32.604 3 AA_C15U16:A80G81_AA A 15 ? A 81 ? A 16 ? A 80 ? 1 A U 4 1_555 A A 68 1_555 A U 5 1_555 A G 67 1_555 -0.222 -0.936 2.864 1.534 2.774 33.368 -2.017 0.602 2.766 4.817 -2.664 33.514 4 AA_U16U17:G79A80_AA A 16 ? A 80 ? A 17 ? A 79 ? 1 A U 5 1_555 A G 67 1_555 A C 6 1_555 A G 66 1_555 0.248 -0.986 3.298 -1.058 5.245 35.328 -2.355 -0.555 3.116 8.581 1.731 35.718 5 AA_U17C18:G78G79_AA A 17 ? A 79 ? A 18 ? A 78 ? 1 A C 6 1_555 A G 66 1_555 A A 7 1_555 A U 65 1_555 0.115 -1.457 3.480 -0.586 11.143 31.263 -4.412 -0.300 2.808 19.899 1.047 33.148 6 AA_C18A19:U77G78_AA A 18 ? A 78 ? A 19 ? A 77 ? 1 A A 7 1_555 A U 65 1_555 A U 8 1_555 A A 64 1_555 0.162 -1.281 3.418 2.166 10.870 32.382 -3.875 0.062 2.857 18.816 -3.749 34.178 7 AA_A19U20:A76U77_AA A 19 ? A 77 ? A 20 ? A 76 ? 1 A U 8 1_555 A A 64 1_555 A A 9 1_555 A U 63 1_555 0.427 -1.228 3.036 0.574 14.769 30.372 -4.159 -0.658 2.225 26.322 -1.023 33.701 8 AA_U20A21:U75A76_AA A 20 ? A 76 ? A 21 ? A 75 ? 1 A U 27 1_555 A U 19 1_555 A U 28 1_555 A A 18 1_555 -0.677 -1.139 3.459 -0.878 6.722 46.112 -2.025 0.779 3.283 8.527 1.114 46.581 9 AA_U39U40:A30U31_AA A 39 ? A 31 ? A 40 ? A 30 ? 1 A U 28 1_555 A A 18 1_555 A U 29 1_555 A A 17 1_555 -0.716 -2.267 2.826 3.006 6.316 17.012 -9.619 3.441 1.727 20.271 -9.648 18.384 10 AA_U40U41:A29A30_AA A 40 ? A 30 ? A 41 ? A 29 ? 1 A U 29 1_555 A A 17 1_555 A C 30 1_555 A G 16 1_555 0.005 -1.279 3.025 0.556 -0.438 33.161 -2.173 0.078 3.041 -0.767 -0.974 33.168 11 AA_U41C42:G28A29_AA A 41 ? A 29 ? A 42 ? A 28 ? 1 A C 30 1_555 A G 16 1_555 A G 31 1_555 A C 15 1_555 0.451 -1.951 3.416 -0.232 8.964 29.495 -5.351 -0.892 2.716 17.114 0.443 30.799 12 AA_C42G43:C27G28_AA A 42 ? A 28 ? A 43 ? A 27 ? 1 A G 31 1_555 A C 15 1_555 A G 32 1_555 A C 14 1_555 0.073 -1.986 3.470 0.366 5.403 31.686 -4.567 -0.066 3.098 9.805 -0.664 32.134 13 AA_G43G44:C26C27_AA A 43 ? A 27 ? A 44 ? A 26 ? 1 A G 32 1_555 A C 14 1_555 A A 33 1_555 A U 13 1_555 -0.110 -2.029 3.081 0.269 2.508 31.459 -4.159 0.249 2.914 4.617 -0.495 31.557 14 AA_G44A45:U25C26_AA A 44 ? A 26 ? A 45 ? A 25 ? 1 A A 33 1_555 A U 13 1_555 A G 34 1_555 A C 41 1_555 2.749 -0.777 3.586 16.544 11.562 49.170 -1.774 -1.796 3.995 13.267 -18.985 52.912 15 AA_A45G46:C53U25_AA A 45 ? A 25 ? A 46 ? A 53 ? 1 A G 34 1_555 A C 41 1_555 A U 10 1_555 A A 40 1_555 -1.527 -0.193 2.588 -3.567 3.136 43.510 -0.500 1.775 2.679 4.215 4.795 43.756 16 AA_G46U22:A52C53_AA A 46 ? A 53 ? A 22 ? A 52 ? 1 A A 23 1_555 A A 52 1_555 A C 49 1_555 A G 25 1_555 4.152 0.268 -3.595 -2.417 -4.179 135.587 0.116 -2.225 -3.634 -2.256 1.305 135.628 17 AA_A35C61:G37A64_AA A 35 ? A 64 ? A 61 ? A 37 ? 1 A C 49 1_555 A G 25 1_555 A A 53 1_555 A U 22 1_555 -2.178 4.970 -5.063 85.586 -132.101 165.021 2.196 0.901 -5.706 -66.129 -42.844 177.073 18 AA_C61A65:U34G37_AA A 61 ? A 37 ? A 65 ? A 34 ? 1 A G 26 1_555 A C 48 1_555 A C 55 1_555 A G 47 1_555 -1.727 -0.304 3.202 1.302 3.901 54.825 -0.554 1.946 3.137 4.229 -1.412 54.967 19 AA_G38C67:G59C60_AA A 38 ? A 60 ? A 67 ? A 59 ? 1 A C 55 1_555 A G 47 1_555 A U 56 1_555 A A 46 1_555 -0.724 -2.094 3.619 -5.019 7.740 31.364 -5.132 0.375 3.104 13.943 9.042 32.660 20 AA_C67U68:A58G59_AA A 67 ? A 59 ? A 68 ? A 58 ? 1 A U 56 1_555 A A 46 1_555 A C 57 1_555 A G 45 1_555 -0.404 -1.169 3.112 0.589 -0.744 33.262 -1.923 0.800 3.130 -1.299 -1.029 33.275 21 AA_U68C69:G57A58_AA A 68 ? A 58 ? A 69 ? A 57 ? 1 A C 57 1_555 A G 45 1_555 A U 58 1_555 A A 44 1_555 -0.568 -1.487 3.459 -5.654 10.962 31.808 -4.286 0.068 2.862 19.127 9.864 34.058 22 AA_C69U70:A56G57_AA A 69 ? A 57 ? A 70 ? A 56 ? 1 A U 58 1_555 A A 44 1_555 A U 59 1_555 A A 43 1_555 0.168 -0.723 3.072 -1.605 3.265 33.185 -1.761 -0.540 2.978 5.695 2.799 33.378 23 AA_U70U71:A55A56_AA A 70 ? A 56 ? A 71 ? A 55 ? 1 A U 59 1_555 A A 43 1_555 A G 60 1_555 A C 42 1_555 0.153 -1.278 2.999 1.582 5.817 31.716 -3.212 -0.027 2.732 10.525 -2.863 32.269 24 AA_U71G72:C54A55_AA A 71 ? A 55 ? A 72 ? A 54 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 '6-amino-1,3,5-triazin-2(1H)-one' 5AZ 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Y26 _pdbx_initial_refinement_model.details 'PDB ENTRY 1Y26' #