data_3LBZ # _entry.id 3LBZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LBZ pdb_00003lbz 10.2210/pdb3lbz/pdb RCSB RCSB057089 ? ? WWPDB D_1000057089 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LBZ _pdbx_database_status.recvd_initial_deposition_date 2010-01-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ghetu, A.F.' 1 'Prive, G.G.' 2 # _citation.id primary _citation.title 'A small-molecule inhibitor of BCL6 kills DLBCL cells in vitro and in vivo.' _citation.journal_abbrev 'Cancer Cell' _citation.journal_volume 17 _citation.page_first 400 _citation.page_last 411 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1535-6108 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20385364 _citation.pdbx_database_id_DOI 10.1016/j.ccr.2009.12.050 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cerchietti, L.C.' 1 ? primary 'Ghetu, A.F.' 2 ? primary 'Zhu, X.' 3 ? primary 'Da Silva, G.F.' 4 ? primary 'Zhong, S.' 5 ? primary 'Matthews, M.' 6 ? primary 'Bunting, K.L.' 7 ? primary 'Polo, J.M.' 8 ? primary 'Fares, C.' 9 ? primary 'Arrowsmith, C.H.' 10 ? primary 'Yang, S.N.' 11 ? primary 'Garcia, M.' 12 ? primary 'Coop, A.' 13 ? primary 'Mackerell, A.D.' 14 ? primary 'Prive, G.G.' 15 ? primary 'Melnick, A.' 16 ? # _cell.entry_id 3LBZ _cell.length_a 101.712 _cell.length_b 38.611 _cell.length_c 78.817 _cell.angle_alpha 90.00 _cell.angle_beta 114.70 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LBZ _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 14559.823 2 ? 'C8Q, C67R, C84N' 'BTB domain, residues 5-129' ? 2 non-polymer syn 'N-[(4-bromophenyl)sulfonyl]acetamide' 278.123 2 ? ? ? ? 3 non-polymer syn '(2R)-2-[(5Z)-5-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]butanedioic acid' 457.276 3 ? ? ? ? 4 water nat water 18.015 22 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6, Zinc finger protein 51, LAZ-3 protein, BCL-5, Zinc finger and BTB domain-containing protein 27' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEG FNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEG FNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 ASP n 1 5 SER n 1 6 GLN n 1 7 ILE n 1 8 GLN n 1 9 PHE n 1 10 THR n 1 11 ARG n 1 12 HIS n 1 13 ALA n 1 14 SER n 1 15 ASP n 1 16 VAL n 1 17 LEU n 1 18 LEU n 1 19 ASN n 1 20 LEU n 1 21 ASN n 1 22 ARG n 1 23 LEU n 1 24 ARG n 1 25 SER n 1 26 ARG n 1 27 ASP n 1 28 ILE n 1 29 LEU n 1 30 THR n 1 31 ASP n 1 32 VAL n 1 33 VAL n 1 34 ILE n 1 35 VAL n 1 36 VAL n 1 37 SER n 1 38 ARG n 1 39 GLU n 1 40 GLN n 1 41 PHE n 1 42 ARG n 1 43 ALA n 1 44 HIS n 1 45 LYS n 1 46 THR n 1 47 VAL n 1 48 LEU n 1 49 MET n 1 50 ALA n 1 51 CYS n 1 52 SER n 1 53 GLY n 1 54 LEU n 1 55 PHE n 1 56 TYR n 1 57 SER n 1 58 ILE n 1 59 PHE n 1 60 THR n 1 61 ASP n 1 62 GLN n 1 63 LEU n 1 64 LYS n 1 65 ARG n 1 66 ASN n 1 67 LEU n 1 68 SER n 1 69 VAL n 1 70 ILE n 1 71 ASN n 1 72 LEU n 1 73 ASP n 1 74 PRO n 1 75 GLU n 1 76 ILE n 1 77 ASN n 1 78 PRO n 1 79 GLU n 1 80 GLY n 1 81 PHE n 1 82 ASN n 1 83 ILE n 1 84 LEU n 1 85 LEU n 1 86 ASP n 1 87 PHE n 1 88 MET n 1 89 TYR n 1 90 THR n 1 91 SER n 1 92 ARG n 1 93 LEU n 1 94 ASN n 1 95 LEU n 1 96 ARG n 1 97 GLU n 1 98 GLY n 1 99 ASN n 1 100 ILE n 1 101 MET n 1 102 ALA n 1 103 VAL n 1 104 MET n 1 105 ALA n 1 106 THR n 1 107 ALA n 1 108 MET n 1 109 TYR n 1 110 LEU n 1 111 GLN n 1 112 MET n 1 113 GLU n 1 114 HIS n 1 115 VAL n 1 116 VAL n 1 117 ASP n 1 118 THR n 1 119 CYS n 1 120 ARG n 1 121 LYS n 1 122 PHE n 1 123 ILE n 1 124 LYS n 1 125 ALA n 1 126 SER n 1 127 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCL5, BCL6, LAZ3, ZBTB27, ZNF51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET32 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BCL6_HUMAN _struct_ref.pdbx_db_accession P41182 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFC ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LBZ A 3 ? 127 ? P41182 5 ? 129 ? 5 129 2 1 3LBZ B 3 ? 127 ? P41182 5 ? 129 ? 5 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LBZ GLY A 1 ? UNP P41182 ? ? 'expression tag' 3 1 1 3LBZ SER A 2 ? UNP P41182 ? ? 'expression tag' 4 2 1 3LBZ GLN A 6 ? UNP P41182 CYS 8 'engineered mutation' 8 3 1 3LBZ ARG A 65 ? UNP P41182 CYS 67 'engineered mutation' 67 4 1 3LBZ ASN A 82 ? UNP P41182 CYS 84 'engineered mutation' 84 5 2 3LBZ GLY B 1 ? UNP P41182 ? ? 'expression tag' 3 6 2 3LBZ SER B 2 ? UNP P41182 ? ? 'expression tag' 4 7 2 3LBZ GLN B 6 ? UNP P41182 CYS 8 'engineered mutation' 8 8 2 3LBZ ARG B 65 ? UNP P41182 CYS 67 'engineered mutation' 67 9 2 3LBZ ASN B 82 ? UNP P41182 CYS 84 'engineered mutation' 84 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Z88 non-polymer . 'N-[(4-bromophenyl)sulfonyl]acetamide' ? 'C8 H8 Br N O3 S' 278.123 Z89 non-polymer . '(2R)-2-[(5Z)-5-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]butanedioic acid' 'N-[(1S)-2-AMINO-1-(2,4-DICHLOROBENZYL)ETHYL]-5-[2-(METHYLAMINO)PYRIMIDIN-4-YL]THIOPHENE-2-CARBOXAMIDE' 'C15 H9 Br N2 O6 S2' 457.276 # _exptl.entry_id 3LBZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_percent_sol 49.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.3 _exptl_crystal_grow.pdbx_details ;1 microliter of protein solution (9.5 mg/ml BCL6-BTB in 20 mM Tris pH 8.3, 450 mM NaCl, 1 mM TCEP) was mixed with 1 microliter of reservoir solution (180 mM sodium acetate, 190 mM sodium formate, 10% Glycerol, 50 mM NaCl and 10mM N-(4-bromophenylsulfonyl)acetamide), VAPOR DIFFUSION, HANGING DROP, temperature 296K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2006-04-24 _diffrn_detector.details ;Rosenbaum-Rock double-crystal monochromator. Rosenbaum-Rock vertical focusing mirror. ; # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock high-resolution double-crystal monochromator. LN2 cooled first crystal, sagittal focusing 2nd crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 3LBZ _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 46.225 _reflns.d_resolution_high 2.300 _reflns.number_obs 12353 _reflns.number_all 12478 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 17.86 _reflns.B_iso_Wilson_estimate 49.41 _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.40 _reflns_shell.percent_possible_all 96.9 _reflns_shell.Rmerge_I_obs 0.158 _reflns_shell.pdbx_Rsym_value 0.140 _reflns_shell.meanI_over_sigI_obs 11.36 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1684 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LBZ _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 12477 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.225 _refine.ls_d_res_high 2.300 _refine.ls_percent_reflns_obs 98.69 _refine.ls_R_factor_obs 0.2154 _refine.ls_R_factor_all 0.2154 _refine.ls_R_factor_R_work 0.2128 _refine.ls_R_factor_R_free 0.2686 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 605 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_max 1.00 _refine.occupancy_min 0.70 _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 42.930 _refine.aniso_B[1][1] -2.490 _refine.aniso_B[2][2] 4.130 _refine.aniso_B[3][3] -2.610 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -1.160 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1R29' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.390 _refine.pdbx_overall_ESU_R_Free 0.264 _refine.overall_SU_ML 0.192 _refine.overall_SU_B 7.990 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_max 92.94 _refine.B_iso_min 16.75 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1970 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 106 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 2098 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 46.225 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.030 0.022 ? 2110 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.929 2.018 ? 2860 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.295 5.000 ? 242 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.703 23.125 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.398 15.000 ? 376 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.221 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.148 0.200 ? 325 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1573 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.249 0.200 ? 919 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.318 0.200 ? 1463 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.110 0.200 ? 62 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.333 0.200 ? 60 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.861 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.691 1.500 ? 1351 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.709 2.000 ? 2017 'X-RAY DIFFRACTION' ? r_scbond_it 3.850 3.000 ? 1117 'X-RAY DIFFRACTION' ? r_scangle_it 6.628 4.500 ? 843 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 404 0.09 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 408 0.19 0.50 'medium positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 404 0.29 0.50 'tight thermal' 1 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 408 1.24 2.00 'medium thermal' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 862 _refine_ls_shell.R_factor_R_work 0.209 _refine_ls_shell.percent_reflns_obs 98.47 _refine_ls_shell.R_factor_R_free 0.335 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 904 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A GLN 8 . A MET 108 . A GLN 10 A MET 110 2 ? 1 2 1 B GLN 8 . B MET 108 . B GLN 10 B MET 110 2 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3LBZ _struct.title 'Crystal Structure of the BCL6 BTB domain complexed with the small molecule inhibitor 79-6' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LBZ _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Transcription regulation, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 11 ? ARG A 26 ? ARG A 13 ARG A 28 1 ? 16 HELX_P HELX_P2 2 HIS A 44 ? SER A 52 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 3 SER A 52 ? THR A 60 ? SER A 54 THR A 62 1 ? 9 HELX_P HELX_P4 4 ASN A 77 ? SER A 91 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P5 5 ASN A 99 ? GLN A 111 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P6 6 MET A 112 ? SER A 126 ? MET A 114 SER A 128 1 ? 15 HELX_P HELX_P7 7 ARG B 11 ? ARG B 26 ? ARG B 13 ARG B 28 1 ? 16 HELX_P HELX_P8 8 HIS B 44 ? SER B 52 ? HIS B 46 SER B 54 1 ? 9 HELX_P HELX_P9 9 SER B 52 ? PHE B 59 ? SER B 54 PHE B 61 1 ? 8 HELX_P HELX_P10 10 LEU B 63 ? LEU B 67 ? LEU B 65 LEU B 69 5 ? 5 HELX_P HELX_P11 11 ASN B 77 ? SER B 91 ? ASN B 79 SER B 93 1 ? 15 HELX_P HELX_P12 12 ASN B 99 ? GLN B 111 ? ASN B 101 GLN B 113 1 ? 13 HELX_P HELX_P13 13 MET B 112 ? SER B 126 ? MET B 114 SER B 128 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 7 ? GLN A 8 ? ILE A 9 GLN A 10 A 2 ARG B 92 ? LEU B 93 ? ARG B 94 LEU B 95 B 1 GLU A 39 ? ALA A 43 ? GLU A 41 ALA A 45 B 2 VAL A 32 ? VAL A 36 ? VAL A 34 VAL A 38 B 3 VAL A 69 ? LEU A 72 ? VAL A 71 LEU A 74 C 1 ARG A 92 ? LEU A 93 ? ARG A 94 LEU A 95 C 2 ILE B 7 ? GLN B 8 ? ILE B 9 GLN B 10 D 1 GLU B 39 ? ALA B 43 ? GLU B 41 ALA B 45 D 2 VAL B 32 ? VAL B 36 ? VAL B 34 VAL B 38 D 3 VAL B 69 ? LEU B 72 ? VAL B 71 LEU B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 7 ? N ILE A 9 O LEU B 93 ? O LEU B 95 B 1 2 O PHE A 41 ? O PHE A 43 N ILE A 34 ? N ILE A 36 B 2 3 N VAL A 35 ? N VAL A 37 O ILE A 70 ? O ILE A 72 C 1 2 N LEU A 93 ? N LEU A 95 O ILE B 7 ? O ILE B 9 D 1 2 O PHE B 41 ? O PHE B 43 N ILE B 34 ? N ILE B 36 D 2 3 N VAL B 35 ? N VAL B 37 O ILE B 70 ? O ILE B 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A Z88 200 ? 7 'BINDING SITE FOR RESIDUE Z88 A 200' AC2 Software A Z89 201 ? 6 'BINDING SITE FOR RESIDUE Z89 A 201' AC3 Software A Z89 202 ? 8 'BINDING SITE FOR RESIDUE Z89 A 202' AC4 Software B Z88 200 ? 9 'BINDING SITE FOR RESIDUE Z88 B 200' AC5 Software B Z89 203 ? 10 'BINDING SITE FOR RESIDUE Z89 B 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 SER A 5 ? SER A 7 . ? 1_555 ? 2 AC1 7 GLN A 6 ? GLN A 8 . ? 1_555 ? 3 AC1 7 ILE A 7 ? ILE A 9 . ? 1_555 ? 4 AC1 7 GLN A 8 ? GLN A 10 . ? 1_555 ? 5 AC1 7 THR A 118 ? THR A 120 . ? 2_555 ? 6 AC1 7 LYS A 121 ? LYS A 123 . ? 2_555 ? 7 AC1 7 Z88 F . ? Z88 B 200 . ? 1_555 ? 8 AC2 6 ASN A 19 ? ASN A 21 . ? 1_555 ? 9 AC2 6 ARG A 22 ? ARG A 24 . ? 1_555 ? 10 AC2 6 LEU A 23 ? LEU A 25 . ? 1_555 ? 11 AC2 6 ARG A 26 ? ARG A 28 . ? 1_555 ? 12 AC2 6 MET B 49 ? MET B 51 . ? 1_555 ? 13 AC2 6 TYR B 56 ? TYR B 58 . ? 1_555 ? 14 AC3 8 MET A 49 ? MET A 51 . ? 1_555 ? 15 AC3 8 SER A 52 ? SER A 54 . ? 1_555 ? 16 AC3 8 GLY A 53 ? GLY A 55 . ? 1_555 ? 17 AC3 8 TYR A 56 ? TYR A 58 . ? 1_555 ? 18 AC3 8 ASN B 19 ? ASN B 21 . ? 1_555 ? 19 AC3 8 ARG B 22 ? ARG B 24 . ? 1_555 ? 20 AC3 8 LEU B 23 ? LEU B 25 . ? 1_555 ? 21 AC3 8 ARG B 26 ? ARG B 28 . ? 1_555 ? 22 AC4 9 ILE A 7 ? ILE A 9 . ? 1_555 ? 23 AC4 9 GLN A 8 ? GLN A 10 . ? 1_555 ? 24 AC4 9 Z88 C . ? Z88 A 200 . ? 1_555 ? 25 AC4 9 SER B 5 ? SER B 7 . ? 2_555 ? 26 AC4 9 GLN B 6 ? GLN B 8 . ? 2_555 ? 27 AC4 9 ILE B 7 ? ILE B 9 . ? 2_555 ? 28 AC4 9 GLN B 8 ? GLN B 10 . ? 2_555 ? 29 AC4 9 THR B 118 ? THR B 120 . ? 1_555 ? 30 AC4 9 LYS B 121 ? LYS B 123 . ? 1_555 ? 31 AC5 10 GLU A 75 ? GLU A 77 . ? 3_455 ? 32 AC5 10 ILE B 58 ? ILE B 60 . ? 1_555 ? 33 AC5 10 LEU B 63 ? LEU B 65 . ? 2_556 ? 34 AC5 10 LYS B 64 ? LYS B 66 . ? 1_555 ? 35 AC5 10 LEU B 67 ? LEU B 69 . ? 1_555 ? 36 AC5 10 VAL B 69 ? VAL B 71 . ? 1_555 ? 37 AC5 10 ASN B 71 ? ASN B 73 . ? 1_555 ? 38 AC5 10 ASN B 71 ? ASN B 73 . ? 2_556 ? 39 AC5 10 ASP B 73 ? ASP B 75 . ? 1_555 ? 40 AC5 10 TYR B 109 ? TYR B 111 . ? 1_555 ? # _database_PDB_matrix.entry_id 3LBZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LBZ _atom_sites.fract_transf_matrix[1][1] 0.009832 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004521 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025899 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013965 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 3 ? ? ? A . n A 1 2 SER 2 4 ? ? ? A . n A 1 3 ALA 3 5 ? ? ? A . n A 1 4 ASP 4 6 ? ? ? A . n A 1 5 SER 5 7 7 SER SER A . n A 1 6 GLN 6 8 8 GLN GLN A . n A 1 7 ILE 7 9 9 ILE ILE A . n A 1 8 GLN 8 10 10 GLN GLN A . n A 1 9 PHE 9 11 11 PHE PHE A . n A 1 10 THR 10 12 12 THR THR A . n A 1 11 ARG 11 13 13 ARG ARG A . n A 1 12 HIS 12 14 14 HIS HIS A . n A 1 13 ALA 13 15 15 ALA ALA A . n A 1 14 SER 14 16 16 SER SER A . n A 1 15 ASP 15 17 17 ASP ASP A . n A 1 16 VAL 16 18 18 VAL VAL A . n A 1 17 LEU 17 19 19 LEU LEU A . n A 1 18 LEU 18 20 20 LEU LEU A . n A 1 19 ASN 19 21 21 ASN ASN A . n A 1 20 LEU 20 22 22 LEU LEU A . n A 1 21 ASN 21 23 23 ASN ASN A . n A 1 22 ARG 22 24 24 ARG ARG A . n A 1 23 LEU 23 25 25 LEU LEU A . n A 1 24 ARG 24 26 26 ARG ARG A . n A 1 25 SER 25 27 27 SER SER A . n A 1 26 ARG 26 28 28 ARG ARG A . n A 1 27 ASP 27 29 29 ASP ASP A . n A 1 28 ILE 28 30 30 ILE ILE A . n A 1 29 LEU 29 31 31 LEU LEU A . n A 1 30 THR 30 32 32 THR THR A . n A 1 31 ASP 31 33 33 ASP ASP A . n A 1 32 VAL 32 34 34 VAL VAL A . n A 1 33 VAL 33 35 35 VAL VAL A . n A 1 34 ILE 34 36 36 ILE ILE A . n A 1 35 VAL 35 37 37 VAL VAL A . n A 1 36 VAL 36 38 38 VAL VAL A . n A 1 37 SER 37 39 39 SER SER A . n A 1 38 ARG 38 40 40 ARG ARG A . n A 1 39 GLU 39 41 41 GLU GLU A . n A 1 40 GLN 40 42 42 GLN GLN A . n A 1 41 PHE 41 43 43 PHE PHE A . n A 1 42 ARG 42 44 44 ARG ARG A . n A 1 43 ALA 43 45 45 ALA ALA A . n A 1 44 HIS 44 46 46 HIS HIS A . n A 1 45 LYS 45 47 47 LYS LYS A . n A 1 46 THR 46 48 48 THR THR A . n A 1 47 VAL 47 49 49 VAL VAL A . n A 1 48 LEU 48 50 50 LEU LEU A . n A 1 49 MET 49 51 51 MET MET A . n A 1 50 ALA 50 52 52 ALA ALA A . n A 1 51 CYS 51 53 53 CYS CYS A . n A 1 52 SER 52 54 54 SER SER A . n A 1 53 GLY 53 55 55 GLY GLY A . n A 1 54 LEU 54 56 56 LEU LEU A . n A 1 55 PHE 55 57 57 PHE PHE A . n A 1 56 TYR 56 58 58 TYR TYR A . n A 1 57 SER 57 59 59 SER SER A . n A 1 58 ILE 58 60 60 ILE ILE A . n A 1 59 PHE 59 61 61 PHE PHE A . n A 1 60 THR 60 62 62 THR THR A . n A 1 61 ASP 61 63 63 ASP ASP A . n A 1 62 GLN 62 64 64 GLN GLN A . n A 1 63 LEU 63 65 65 LEU LEU A . n A 1 64 LYS 64 66 66 LYS LYS A . n A 1 65 ARG 65 67 67 ARG ARG A . n A 1 66 ASN 66 68 68 ASN ASN A . n A 1 67 LEU 67 69 69 LEU LEU A . n A 1 68 SER 68 70 70 SER SER A . n A 1 69 VAL 69 71 71 VAL VAL A . n A 1 70 ILE 70 72 72 ILE ILE A . n A 1 71 ASN 71 73 73 ASN ASN A . n A 1 72 LEU 72 74 74 LEU LEU A . n A 1 73 ASP 73 75 75 ASP ASP A . n A 1 74 PRO 74 76 76 PRO PRO A . n A 1 75 GLU 75 77 77 GLU GLU A . n A 1 76 ILE 76 78 78 ILE ILE A . n A 1 77 ASN 77 79 79 ASN ASN A . n A 1 78 PRO 78 80 80 PRO PRO A . n A 1 79 GLU 79 81 81 GLU GLU A . n A 1 80 GLY 80 82 82 GLY GLY A . n A 1 81 PHE 81 83 83 PHE PHE A . n A 1 82 ASN 82 84 84 ASN ASN A . n A 1 83 ILE 83 85 85 ILE ILE A . n A 1 84 LEU 84 86 86 LEU LEU A . n A 1 85 LEU 85 87 87 LEU LEU A . n A 1 86 ASP 86 88 88 ASP ASP A . n A 1 87 PHE 87 89 89 PHE PHE A . n A 1 88 MET 88 90 90 MET MET A . n A 1 89 TYR 89 91 91 TYR TYR A . n A 1 90 THR 90 92 92 THR THR A . n A 1 91 SER 91 93 93 SER SER A . n A 1 92 ARG 92 94 94 ARG ARG A . n A 1 93 LEU 93 95 95 LEU LEU A . n A 1 94 ASN 94 96 96 ASN ASN A . n A 1 95 LEU 95 97 97 LEU LEU A . n A 1 96 ARG 96 98 98 ARG ARG A . n A 1 97 GLU 97 99 99 GLU GLU A . n A 1 98 GLY 98 100 100 GLY GLY A . n A 1 99 ASN 99 101 101 ASN ASN A . n A 1 100 ILE 100 102 102 ILE ILE A . n A 1 101 MET 101 103 103 MET MET A . n A 1 102 ALA 102 104 104 ALA ALA A . n A 1 103 VAL 103 105 105 VAL VAL A . n A 1 104 MET 104 106 106 MET MET A . n A 1 105 ALA 105 107 107 ALA ALA A . n A 1 106 THR 106 108 108 THR THR A . n A 1 107 ALA 107 109 109 ALA ALA A . n A 1 108 MET 108 110 110 MET MET A . n A 1 109 TYR 109 111 111 TYR TYR A . n A 1 110 LEU 110 112 112 LEU LEU A . n A 1 111 GLN 111 113 113 GLN GLN A . n A 1 112 MET 112 114 114 MET MET A . n A 1 113 GLU 113 115 115 GLU GLU A . n A 1 114 HIS 114 116 116 HIS HIS A . n A 1 115 VAL 115 117 117 VAL VAL A . n A 1 116 VAL 116 118 118 VAL VAL A . n A 1 117 ASP 117 119 119 ASP ASP A . n A 1 118 THR 118 120 120 THR THR A . n A 1 119 CYS 119 121 121 CYS CYS A . n A 1 120 ARG 120 122 122 ARG ARG A . n A 1 121 LYS 121 123 123 LYS LYS A . n A 1 122 PHE 122 124 124 PHE PHE A . n A 1 123 ILE 123 125 125 ILE ILE A . n A 1 124 LYS 124 126 126 LYS LYS A . n A 1 125 ALA 125 127 127 ALA ALA A . n A 1 126 SER 126 128 128 SER SER A . n A 1 127 GLU 127 129 ? ? ? A . n B 1 1 GLY 1 3 ? ? ? B . n B 1 2 SER 2 4 ? ? ? B . n B 1 3 ALA 3 5 ? ? ? B . n B 1 4 ASP 4 6 ? ? ? B . n B 1 5 SER 5 7 7 SER SER B . n B 1 6 GLN 6 8 8 GLN GLN B . n B 1 7 ILE 7 9 9 ILE ILE B . n B 1 8 GLN 8 10 10 GLN GLN B . n B 1 9 PHE 9 11 11 PHE PHE B . n B 1 10 THR 10 12 12 THR THR B . n B 1 11 ARG 11 13 13 ARG ARG B . n B 1 12 HIS 12 14 14 HIS HIS B . n B 1 13 ALA 13 15 15 ALA ALA B . n B 1 14 SER 14 16 16 SER SER B . n B 1 15 ASP 15 17 17 ASP ASP B . n B 1 16 VAL 16 18 18 VAL VAL B . n B 1 17 LEU 17 19 19 LEU LEU B . n B 1 18 LEU 18 20 20 LEU LEU B . n B 1 19 ASN 19 21 21 ASN ASN B . n B 1 20 LEU 20 22 22 LEU LEU B . n B 1 21 ASN 21 23 23 ASN ASN B . n B 1 22 ARG 22 24 24 ARG ARG B . n B 1 23 LEU 23 25 25 LEU LEU B . n B 1 24 ARG 24 26 26 ARG ARG B . n B 1 25 SER 25 27 27 SER SER B . n B 1 26 ARG 26 28 28 ARG ARG B . n B 1 27 ASP 27 29 29 ASP ASP B . n B 1 28 ILE 28 30 30 ILE ILE B . n B 1 29 LEU 29 31 31 LEU LEU B . n B 1 30 THR 30 32 32 THR THR B . n B 1 31 ASP 31 33 33 ASP ASP B . n B 1 32 VAL 32 34 34 VAL VAL B . n B 1 33 VAL 33 35 35 VAL VAL B . n B 1 34 ILE 34 36 36 ILE ILE B . n B 1 35 VAL 35 37 37 VAL VAL B . n B 1 36 VAL 36 38 38 VAL VAL B . n B 1 37 SER 37 39 39 SER SER B . n B 1 38 ARG 38 40 40 ARG ARG B . n B 1 39 GLU 39 41 41 GLU GLU B . n B 1 40 GLN 40 42 42 GLN GLN B . n B 1 41 PHE 41 43 43 PHE PHE B . n B 1 42 ARG 42 44 44 ARG ARG B . n B 1 43 ALA 43 45 45 ALA ALA B . n B 1 44 HIS 44 46 46 HIS HIS B . n B 1 45 LYS 45 47 47 LYS LYS B . n B 1 46 THR 46 48 48 THR THR B . n B 1 47 VAL 47 49 49 VAL VAL B . n B 1 48 LEU 48 50 50 LEU LEU B . n B 1 49 MET 49 51 51 MET MET B . n B 1 50 ALA 50 52 52 ALA ALA B . n B 1 51 CYS 51 53 53 CYS CYS B . n B 1 52 SER 52 54 54 SER SER B . n B 1 53 GLY 53 55 55 GLY GLY B . n B 1 54 LEU 54 56 56 LEU LEU B . n B 1 55 PHE 55 57 57 PHE PHE B . n B 1 56 TYR 56 58 58 TYR TYR B . n B 1 57 SER 57 59 59 SER SER B . n B 1 58 ILE 58 60 60 ILE ILE B . n B 1 59 PHE 59 61 61 PHE PHE B . n B 1 60 THR 60 62 62 THR THR B . n B 1 61 ASP 61 63 63 ASP ASP B . n B 1 62 GLN 62 64 64 GLN GLN B . n B 1 63 LEU 63 65 65 LEU LEU B . n B 1 64 LYS 64 66 66 LYS LYS B . n B 1 65 ARG 65 67 67 ARG ARG B . n B 1 66 ASN 66 68 68 ASN ASN B . n B 1 67 LEU 67 69 69 LEU LEU B . n B 1 68 SER 68 70 70 SER SER B . n B 1 69 VAL 69 71 71 VAL VAL B . n B 1 70 ILE 70 72 72 ILE ILE B . n B 1 71 ASN 71 73 73 ASN ASN B . n B 1 72 LEU 72 74 74 LEU LEU B . n B 1 73 ASP 73 75 75 ASP ASP B . n B 1 74 PRO 74 76 76 PRO PRO B . n B 1 75 GLU 75 77 77 GLU GLU B . n B 1 76 ILE 76 78 78 ILE ILE B . n B 1 77 ASN 77 79 79 ASN ASN B . n B 1 78 PRO 78 80 80 PRO PRO B . n B 1 79 GLU 79 81 81 GLU GLU B . n B 1 80 GLY 80 82 82 GLY GLY B . n B 1 81 PHE 81 83 83 PHE PHE B . n B 1 82 ASN 82 84 84 ASN ASN B . n B 1 83 ILE 83 85 85 ILE ILE B . n B 1 84 LEU 84 86 86 LEU LEU B . n B 1 85 LEU 85 87 87 LEU LEU B . n B 1 86 ASP 86 88 88 ASP ASP B . n B 1 87 PHE 87 89 89 PHE PHE B . n B 1 88 MET 88 90 90 MET MET B . n B 1 89 TYR 89 91 91 TYR TYR B . n B 1 90 THR 90 92 92 THR THR B . n B 1 91 SER 91 93 93 SER SER B . n B 1 92 ARG 92 94 94 ARG ARG B . n B 1 93 LEU 93 95 95 LEU LEU B . n B 1 94 ASN 94 96 96 ASN ASN B . n B 1 95 LEU 95 97 97 LEU LEU B . n B 1 96 ARG 96 98 98 ARG ARG B . n B 1 97 GLU 97 99 99 GLU GLU B . n B 1 98 GLY 98 100 100 GLY GLY B . n B 1 99 ASN 99 101 101 ASN ASN B . n B 1 100 ILE 100 102 102 ILE ILE B . n B 1 101 MET 101 103 103 MET MET B . n B 1 102 ALA 102 104 104 ALA ALA B . n B 1 103 VAL 103 105 105 VAL VAL B . n B 1 104 MET 104 106 106 MET MET B . n B 1 105 ALA 105 107 107 ALA ALA B . n B 1 106 THR 106 108 108 THR THR B . n B 1 107 ALA 107 109 109 ALA ALA B . n B 1 108 MET 108 110 110 MET MET B . n B 1 109 TYR 109 111 111 TYR TYR B . n B 1 110 LEU 110 112 112 LEU LEU B . n B 1 111 GLN 111 113 113 GLN GLN B . n B 1 112 MET 112 114 114 MET MET B . n B 1 113 GLU 113 115 115 GLU GLU B . n B 1 114 HIS 114 116 116 HIS HIS B . n B 1 115 VAL 115 117 117 VAL VAL B . n B 1 116 VAL 116 118 118 VAL VAL B . n B 1 117 ASP 117 119 119 ASP ASP B . n B 1 118 THR 118 120 120 THR THR B . n B 1 119 CYS 119 121 121 CYS CYS B . n B 1 120 ARG 120 122 122 ARG ARG B . n B 1 121 LYS 121 123 123 LYS LYS B . n B 1 122 PHE 122 124 124 PHE PHE B . n B 1 123 ILE 123 125 125 ILE ILE B . n B 1 124 LYS 124 126 126 LYS LYS B . n B 1 125 ALA 125 127 127 ALA ALA B . n B 1 126 SER 126 128 128 SER SER B . n B 1 127 GLU 127 129 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Z88 1 200 200 Z88 Z88 A . D 3 Z89 1 201 201 Z89 Z89 A . E 3 Z89 1 202 201 Z89 Z89 A . F 2 Z88 1 200 200 Z88 Z88 B . G 3 Z89 1 203 203 Z89 Z89 B . H 4 HOH 1 300 300 HOH HOH A . H 4 HOH 2 303 303 HOH HOH A . H 4 HOH 3 304 304 HOH HOH A . H 4 HOH 4 305 305 HOH HOH A . H 4 HOH 5 306 306 HOH HOH A . H 4 HOH 6 307 307 HOH HOH A . H 4 HOH 7 309 309 HOH HOH A . H 4 HOH 8 310 310 HOH HOH A . H 4 HOH 9 314 314 HOH HOH A . I 4 HOH 1 301 301 HOH HOH B . I 4 HOH 2 302 302 HOH HOH B . I 4 HOH 3 308 308 HOH HOH B . I 4 HOH 4 311 311 HOH HOH B . I 4 HOH 5 312 312 HOH HOH B . I 4 HOH 6 313 313 HOH HOH B . I 4 HOH 7 315 315 HOH HOH B . I 4 HOH 8 316 316 HOH HOH B . I 4 HOH 9 317 317 HOH HOH B . I 4 HOH 10 318 318 HOH HOH B . I 4 HOH 11 319 319 HOH HOH B . I 4 HOH 12 320 320 HOH HOH B . I 4 HOH 13 321 321 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3570 ? 1 MORE -25 ? 1 'SSA (A^2)' 12890 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-13 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 8 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 9 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 10 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 11 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 12 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 13 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 14 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3LBZ _pdbx_entry_details.nonpolymer_details ;LIGAND Z89 A 201 AT SITE AC2 AND LIGAND Z89 A 202 AT SITE AC3 ARE AT ROUGHLY EQUIVALENT POSITIONS IN THE LATERAL GROOVE OF THE BCL6 BTB DOMAIN HOMODIMER ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? 56.54 -94.56 2 1 ASP A 75 ? ? -32.79 119.63 3 1 SER B 39 ? ? 49.62 -81.50 4 1 ASP B 75 ? ? -37.43 119.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 3 ? A GLY 1 2 1 Y 1 A SER 4 ? A SER 2 3 1 Y 1 A ALA 5 ? A ALA 3 4 1 Y 1 A ASP 6 ? A ASP 4 5 1 Y 1 A GLU 129 ? A GLU 127 6 1 Y 1 B GLY 3 ? B GLY 1 7 1 Y 1 B SER 4 ? B SER 2 8 1 Y 1 B ALA 5 ? B ALA 3 9 1 Y 1 B ASP 6 ? B ASP 4 10 1 Y 1 B GLU 129 ? B GLU 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 Z88 CAA C N N 364 Z88 OAB O N N 365 Z88 OAC O N N 366 Z88 OAD O N N 367 Z88 BRAE BR N N 368 Z88 CAF C Y N 369 Z88 CAG C Y N 370 Z88 CAH C Y N 371 Z88 CAI C Y N 372 Z88 NAJ N N N 373 Z88 CAK C N N 374 Z88 CAL C Y N 375 Z88 CAM C Y N 376 Z88 SAN S N N 377 Z88 HAA H N N 378 Z88 HAAA H N N 379 Z88 HAAB H N N 380 Z88 HAF H N N 381 Z88 HAG H N N 382 Z88 HAH H N N 383 Z88 HAI H N N 384 Z88 HNAJ H N N 385 Z89 C C N N 386 Z89 N N N N 387 Z89 O O N N 388 Z89 CA C N R 389 Z89 CB C N N 390 Z89 CG C N N 391 Z89 CAA C Y N 392 Z89 CAB C Y N 393 Z89 CAC C Y N 394 Z89 CAD C Y N 395 Z89 BRAE BR N N 396 Z89 CAF C Y N 397 Z89 CAG C Y N 398 Z89 CAH C N N 399 Z89 CAI C N N 400 Z89 NAJ N N N 401 Z89 OAK O N N 402 Z89 CAL C N N 403 Z89 CAM C N N 404 Z89 CAW C N N 405 Z89 SAX S N N 406 Z89 SAY S N N 407 Z89 OAZ O N N 408 Z89 OD1 O N N 409 Z89 OD2 O N N 410 Z89 OXT O N N 411 Z89 HO H N N 412 Z89 HA H N N 413 Z89 HB H N N 414 Z89 HBA H N N 415 Z89 HAC H N N 416 Z89 HAF H N N 417 Z89 HAG H N N 418 Z89 HNAJ H N N 419 Z89 HOD1 H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 Z88 CAA CAK sing N N 348 Z88 CAA HAA sing N N 349 Z88 CAA HAAA sing N N 350 Z88 CAA HAAB sing N N 351 Z88 OAB CAK doub N N 352 Z88 SAN OAC doub N N 353 Z88 SAN OAD doub N N 354 Z88 CAL BRAE sing N N 355 Z88 CAL CAF doub Y N 356 Z88 CAH CAF sing Y N 357 Z88 CAF HAF sing N N 358 Z88 CAI CAG doub Y N 359 Z88 CAG CAL sing Y N 360 Z88 CAG HAG sing N N 361 Z88 CAM CAH doub Y N 362 Z88 CAH HAH sing N N 363 Z88 CAI CAM sing Y N 364 Z88 CAI HAI sing N N 365 Z88 CAK NAJ sing N N 366 Z88 NAJ SAN sing N N 367 Z88 NAJ HNAJ sing N N 368 Z88 SAN CAM sing N N 369 Z89 CA C sing N N 370 Z89 C OXT doub N N 371 Z89 C O sing N N 372 Z89 CAW N sing N N 373 Z89 N CAM sing N N 374 Z89 N CA sing N N 375 Z89 O HO sing N N 376 Z89 CA CB sing N N 377 Z89 CA HA sing N N 378 Z89 CB CG sing N N 379 Z89 CB HB sing N N 380 Z89 CB HBA sing N N 381 Z89 OD2 CG doub N N 382 Z89 CG OD1 sing N N 383 Z89 NAJ CAA sing N N 384 Z89 CAA CAB doub Y N 385 Z89 CAA CAG sing Y N 386 Z89 CAH CAB sing N N 387 Z89 CAB CAC sing Y N 388 Z89 CAC CAD doub Y N 389 Z89 CAC HAC sing N N 390 Z89 CAF CAD sing Y N 391 Z89 CAD BRAE sing N N 392 Z89 CAG CAF doub Y N 393 Z89 CAF HAF sing N N 394 Z89 CAG HAG sing N N 395 Z89 CAI CAH sing N N 396 Z89 CAL CAH doub N N 397 Z89 OAK CAI doub N Z 398 Z89 CAI NAJ sing N N 399 Z89 NAJ HNAJ sing N N 400 Z89 SAY CAL sing N N 401 Z89 CAL CAM sing N N 402 Z89 CAM OAZ doub N N 403 Z89 SAY CAW sing N N 404 Z89 SAX CAW doub N N 405 Z89 OD1 HOD1 sing N N 406 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-[(4-bromophenyl)sulfonyl]acetamide' Z88 3 '(2R)-2-[(5Z)-5-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]butanedioic acid' Z89 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R29 _pdbx_initial_refinement_model.details 'PDB ENTRY 1R29' #