data_3LG7 # _entry.id 3LG7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LG7 pdb_00003lg7 10.2210/pdb3lg7/pdb RCSB RCSB057238 ? ? WWPDB D_1000057238 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LF6 . unspecified PDB 3LF9 . unspecified PDB 3LEF . unspecified PDB 3LH2 . unspecified PDB 3LHP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LG7 _pdbx_database_status.recvd_initial_deposition_date 2010-01-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Holmes, M.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope.' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 1116 _citation.page_last 1126 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20826338 _citation.pdbx_database_id_DOI 10.1016/j.str.2010.06.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Correia, B.E.' 1 ? primary 'Ban, Y.E.' 2 ? primary 'Holmes, M.A.' 3 ? primary 'Xu, H.' 4 ? primary 'Ellingson, K.' 5 ? primary 'Kraft, Z.' 6 ? primary 'Carrico, C.' 7 ? primary 'Boni, E.' 8 ? primary 'Sather, D.N.' 9 ? primary 'Zenobia, C.' 10 ? primary 'Burke, K.Y.' 11 ? primary 'Bradley-Hewitt, T.' 12 ? primary 'Bruhn-Johannsen, J.F.' 13 ? primary 'Kalyuzhniy, O.' 14 ? primary 'Baker, D.' 15 ? primary 'Strong, R.K.' 16 ? primary 'Stamatatos, L.' 17 ? primary 'Schief, W.R.' 18 ? # _cell.entry_id 3LG7 _cell.length_a 91.600 _cell.length_b 94.870 _cell.length_c 108.390 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LG7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '4E10_S0_1EZ3A_002_C (T246)' 16412.529 3 ? ? ? 'THE AUTHOR STATES THAT The epitope-scaffold is based on THE NEURONAL T-SNARE SYNTAXIN-1A (PDB ID 1EZ3)' 2 non-polymer syn 'SULFATE ION' 96.063 11 ? ? ? ? 3 water nat water 18.015 94 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(FME)RDKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETANEVRKKLKEIEQSI EQEEGKNKSSADLKIRKRQHEELERKFREVMKEYNATQQDYRKRARKRNLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MRDKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETANEVRKKLKEIEQSIEQEE GKNKSSADLKIRKRQHEELERKFREVMKEYNATQQDYRKRARKRNLEHHHHHH ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 FME n 1 2 ARG n 1 3 ASP n 1 4 LYS n 1 5 PHE n 1 6 MET n 1 7 ASP n 1 8 GLU n 1 9 PHE n 1 10 PHE n 1 11 LYS n 1 12 GLN n 1 13 VAL n 1 14 GLU n 1 15 GLU n 1 16 ILE n 1 17 ARG n 1 18 GLN n 1 19 TYR n 1 20 ILE n 1 21 ASP n 1 22 ARG n 1 23 ILE n 1 24 ALA n 1 25 GLU n 1 26 ASN n 1 27 VAL n 1 28 GLU n 1 29 GLU n 1 30 VAL n 1 31 ALA n 1 32 ARG n 1 33 GLN n 1 34 HIS n 1 35 GLN n 1 36 ALA n 1 37 ILE n 1 38 LEU n 1 39 ALA n 1 40 SER n 1 41 PRO n 1 42 ASN n 1 43 PRO n 1 44 ASN n 1 45 TRP n 1 46 PHE n 1 47 ASP n 1 48 ILE n 1 49 SER n 1 50 GLN n 1 51 LEU n 1 52 LEU n 1 53 TRP n 1 54 LEU n 1 55 MET n 1 56 ALA n 1 57 ASP n 1 58 ILE n 1 59 LYS n 1 60 GLU n 1 61 THR n 1 62 ALA n 1 63 ASN n 1 64 GLU n 1 65 VAL n 1 66 ARG n 1 67 LYS n 1 68 LYS n 1 69 LEU n 1 70 LYS n 1 71 GLU n 1 72 ILE n 1 73 GLU n 1 74 GLN n 1 75 SER n 1 76 ILE n 1 77 GLU n 1 78 GLN n 1 79 GLU n 1 80 GLU n 1 81 GLY n 1 82 LYS n 1 83 ASN n 1 84 LYS n 1 85 SER n 1 86 SER n 1 87 ALA n 1 88 ASP n 1 89 LEU n 1 90 LYS n 1 91 ILE n 1 92 ARG n 1 93 LYS n 1 94 ARG n 1 95 GLN n 1 96 HIS n 1 97 GLU n 1 98 GLU n 1 99 LEU n 1 100 GLU n 1 101 ARG n 1 102 LYS n 1 103 PHE n 1 104 ARG n 1 105 GLU n 1 106 VAL n 1 107 MET n 1 108 LYS n 1 109 GLU n 1 110 TYR n 1 111 ASN n 1 112 ALA n 1 113 THR n 1 114 GLN n 1 115 GLN n 1 116 ASP n 1 117 TYR n 1 118 ARG n 1 119 LYS n 1 120 ARG n 1 121 ALA n 1 122 ARG n 1 123 LYS n 1 124 ARG n 1 125 ASN n 1 126 LEU n 1 127 GLU n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n 1 132 HIS n 1 133 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'The epitope-scaffold is based on THE NEURONAL T-SNARE SYNTAXIN-1A (PDB ID 1EZ3)' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ARTIFICIAL GENE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) STAR' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET29 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3LG7 _struct_ref.pdbx_db_accession 3LG7 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ;(FME)RDKFMDEFFKQVEEIRQYIDRIAENVEEVARQHQAILASPNPNWFDISQLLWLMADIKETANEVRKKLKEIEQSI EQEEGKNKSSADLKIRKRQHEELERKFREVMKEYNATQQDYRKRARKRNLEHHHHHH ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LG7 A 1 ? 133 ? 3LG7 0 ? 132 ? 0 132 2 1 3LG7 B 1 ? 133 ? 3LG7 0 ? 132 ? 0 132 3 1 3LG7 C 1 ? 133 ? 3LG7 0 ? 132 ? 0 132 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FME 'L-peptide linking' n N-FORMYLMETHIONINE ? 'C6 H11 N O3 S' 177.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LG7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.78 _exptl_crystal.density_percent_sol 74.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'Ammonium sulfate, bis Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 107 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2008-05-09 _diffrn_detector.details 'Rigaku Varimax HF' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3LG7 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.82 _reflns.d_resolution_high 2.5 _reflns.number_obs 33220 _reflns.number_all 33220 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.6 _reflns.B_iso_Wilson_estimate 66.7 _reflns.pdbx_redundancy 4.53 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 96.8 _reflns_shell.Rmerge_I_obs 0.429 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 3.78 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3180 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LG7 _refine.ls_number_reflns_obs 33123 _refine.ls_number_reflns_all 33123 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.82 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.39 _refine.ls_R_factor_obs 0.25923 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.25702 _refine.ls_R_factor_R_free 0.30121 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1672 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.930 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 38.599 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] -0.04 _refine.aniso_B[3][3] -0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Computationally-derived model of the epitope-scaffold, based on 1EZ3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'Isotropic with 15 TLS groups' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.279 _refine.pdbx_overall_ESU_R_Free 0.249 _refine.overall_SU_ML 0.208 _refine.overall_SU_B 18.258 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3096 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 3245 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 28.82 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 3250 'X-RAY DIFFRACTION' ? r_bond_other_d 0.005 0.020 ? 2329 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.189 1.961 ? 4366 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.730 3.000 ? 5620 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.952 5.000 ? 382 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.867 24.271 ? 192 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.272 15.000 ? 641 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.723 15.000 ? 39 'X-RAY DIFFRACTION' ? r_chiral_restr 0.062 0.200 ? 451 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 3557 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 670 'X-RAY DIFFRACTION' ? r_nbd_refined 0.246 0.300 ? 754 'X-RAY DIFFRACTION' ? r_nbd_other 0.194 0.300 ? 2285 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.198 0.500 ? 1549 'X-RAY DIFFRACTION' ? r_nbtor_other 0.089 0.500 ? 1741 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.186 0.500 ? 200 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.153 0.300 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.357 0.300 ? 63 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.199 0.500 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.683 2.000 ? 2064 'X-RAY DIFFRACTION' ? r_mcbond_other 0.222 2.000 ? 744 'X-RAY DIFFRACTION' ? r_mcangle_it 1.667 3.000 ? 3030 'X-RAY DIFFRACTION' ? r_scbond_it 2.960 4.000 ? 1472 'X-RAY DIFFRACTION' ? r_scangle_it 4.297 6.000 ? 1327 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_R_work 2216 _refine_ls_shell.R_factor_R_work 0.286 _refine_ls_shell.percent_reflns_obs 96.00 _refine_ls_shell.R_factor_R_free 0.334 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 112 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LG7 _struct.title 'Crystal structure of HIV epitope-scaffold 4E10_S0_1EZ3A_002_C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LG7 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'EPITOPE-SCAFFOLD, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 3 ? P N N 3 ? Q N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 FME A 1 ? SER A 40 ? FME A 0 SER A 39 1 ? 40 HELX_P HELX_P2 2 ASN A 44 ? GLU A 80 ? ASN A 43 GLU A 79 1 ? 37 HELX_P HELX_P3 3 SER A 86 ? GLU A 127 ? SER A 85 GLU A 126 1 ? 42 HELX_P HELX_P4 4 FME B 1 ? SER B 40 ? FME B 0 SER B 39 1 ? 40 HELX_P HELX_P5 5 ASN B 44 ? GLU B 80 ? ASN B 43 GLU B 79 1 ? 37 HELX_P HELX_P6 6 SER B 86 ? GLU B 127 ? SER B 85 GLU B 126 1 ? 42 HELX_P HELX_P7 7 ARG C 2 ? SER C 40 ? ARG C 1 SER C 39 1 ? 39 HELX_P HELX_P8 8 ASN C 44 ? GLU C 80 ? ASN C 43 GLU C 79 1 ? 37 HELX_P HELX_P9 9 SER C 86 ? GLU C 127 ? SER C 85 GLU C 126 1 ? 42 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A FME 1 C ? ? ? 1_555 A ARG 2 N ? ? A FME 0 A ARG 1 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? B FME 1 C ? ? ? 1_555 B ARG 2 N ? ? B FME 0 B ARG 1 1_555 ? ? ? ? ? ? ? 1.338 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 133 ? 6 'BINDING SITE FOR RESIDUE SO4 A 133' AC2 Software A SO4 134 ? 3 'BINDING SITE FOR RESIDUE SO4 A 134' AC3 Software A SO4 135 ? 3 'BINDING SITE FOR RESIDUE SO4 A 135' AC4 Software A SO4 136 ? 4 'BINDING SITE FOR RESIDUE SO4 A 136' AC5 Software B SO4 133 ? 5 'BINDING SITE FOR RESIDUE SO4 B 133' AC6 Software B SO4 134 ? 5 'BINDING SITE FOR RESIDUE SO4 B 134' AC7 Software B SO4 135 ? 5 'BINDING SITE FOR RESIDUE SO4 B 135' AC8 Software B SO4 136 ? 5 'BINDING SITE FOR RESIDUE SO4 B 136' AC9 Software C SO4 133 ? 7 'BINDING SITE FOR RESIDUE SO4 C 133' BC1 Software C SO4 134 ? 5 'BINDING SITE FOR RESIDUE SO4 C 134' BC2 Software C SO4 135 ? 5 'BINDING SITE FOR RESIDUE SO4 C 135' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 90 ? LYS A 89 . ? 1_555 ? 2 AC1 6 ARG A 94 ? ARG A 93 . ? 1_555 ? 3 AC1 6 HOH O . ? HOH A 138 . ? 1_555 ? 4 AC1 6 ASN B 111 ? ASN B 110 . ? 3_544 ? 5 AC1 6 GLN B 115 ? GLN B 114 . ? 3_544 ? 6 AC1 6 ARG B 118 ? ARG B 117 . ? 3_544 ? 7 AC2 3 LYS A 119 ? LYS A 118 . ? 1_555 ? 8 AC2 3 ARG A 120 ? ARG A 119 . ? 1_555 ? 9 AC2 3 ARG C 17 ? ARG C 16 . ? 2_554 ? 10 AC3 3 LYS A 90 ? LYS A 89 . ? 1_555 ? 11 AC3 3 LYS A 93 ? LYS A 92 . ? 1_555 ? 12 AC3 3 ARG A 94 ? ARG A 93 . ? 1_555 ? 13 AC4 4 ARG A 2 ? ARG A 1 . ? 1_555 ? 14 AC4 4 GLU A 79 ? GLU A 78 . ? 1_555 ? 15 AC4 4 SER A 86 ? SER A 85 . ? 1_555 ? 16 AC4 4 ARG A 92 ? ARG A 91 . ? 1_555 ? 17 AC5 5 LYS B 90 ? LYS B 89 . ? 1_555 ? 18 AC5 5 ARG B 94 ? ARG B 93 . ? 1_555 ? 19 AC5 5 HOH P . ? HOH B 137 . ? 1_555 ? 20 AC5 5 GLN C 115 ? GLN C 114 . ? 4_455 ? 21 AC5 5 ARG C 118 ? ARG C 117 . ? 4_455 ? 22 AC6 5 ARG A 17 ? ARG A 16 . ? 3_554 ? 23 AC6 5 LYS B 119 ? LYS B 118 . ? 1_555 ? 24 AC6 5 ARG B 120 ? ARG B 119 . ? 1_555 ? 25 AC6 5 LYS B 123 ? LYS B 122 . ? 1_555 ? 26 AC6 5 HOH P . ? HOH B 138 . ? 1_555 ? 27 AC7 5 GLU B 80 ? GLU B 79 . ? 1_555 ? 28 AC7 5 SER B 85 ? SER B 84 . ? 1_555 ? 29 AC7 5 LYS B 90 ? LYS B 89 . ? 1_555 ? 30 AC7 5 LYS B 93 ? LYS B 92 . ? 1_555 ? 31 AC7 5 ARG B 94 ? ARG B 93 . ? 1_555 ? 32 AC8 5 GLU B 79 ? GLU B 78 . ? 1_555 ? 33 AC8 5 SER B 86 ? SER B 85 . ? 1_555 ? 34 AC8 5 ASP B 88 ? ASP B 87 . ? 1_555 ? 35 AC8 5 LEU B 89 ? LEU B 88 . ? 1_555 ? 36 AC8 5 ARG B 92 ? ARG B 91 . ? 1_555 ? 37 AC9 7 GLN A 115 ? GLN A 114 . ? 2_555 ? 38 AC9 7 ARG A 118 ? ARG A 117 . ? 2_555 ? 39 AC9 7 HOH O . ? HOH A 161 . ? 2_555 ? 40 AC9 7 LYS C 90 ? LYS C 89 . ? 1_555 ? 41 AC9 7 ARG C 94 ? ARG C 93 . ? 1_555 ? 42 AC9 7 SO4 N . ? SO4 C 135 . ? 1_555 ? 43 AC9 7 HOH Q . ? HOH C 149 . ? 1_555 ? 44 BC1 5 ARG B 17 ? ARG B 16 . ? 4_555 ? 45 BC1 5 LYS C 119 ? LYS C 118 . ? 1_555 ? 46 BC1 5 ARG C 120 ? ARG C 119 . ? 1_555 ? 47 BC1 5 LYS C 123 ? LYS C 122 . ? 1_555 ? 48 BC1 5 HOH Q . ? HOH C 151 . ? 1_555 ? 49 BC2 5 SER C 85 ? SER C 84 . ? 1_555 ? 50 BC2 5 LYS C 90 ? LYS C 89 . ? 1_555 ? 51 BC2 5 LYS C 93 ? LYS C 92 . ? 1_555 ? 52 BC2 5 ARG C 94 ? ARG C 93 . ? 1_555 ? 53 BC2 5 SO4 L . ? SO4 C 133 . ? 1_555 ? # _database_PDB_matrix.entry_id 3LG7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LG7 _atom_sites.fract_transf_matrix[1][1] 0.010917 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010541 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009226 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 FME 1 0 0 FME FME A . n A 1 2 ARG 2 1 1 ARG ARG A . n A 1 3 ASP 3 2 2 ASP ASP A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 PHE 5 4 4 PHE PHE A . n A 1 6 MET 6 5 5 MET MET A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 GLN 12 11 11 GLN GLN A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 GLN 18 17 17 GLN GLN A . n A 1 19 TYR 19 18 18 TYR TYR A . n A 1 20 ILE 20 19 19 ILE ILE A . n A 1 21 ASP 21 20 20 ASP ASP A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 ILE 23 22 22 ILE ILE A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 ASN 26 25 25 ASN ASN A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ALA 31 30 30 ALA ALA A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 GLN 33 32 32 GLN GLN A . n A 1 34 HIS 34 33 33 HIS HIS A . n A 1 35 GLN 35 34 34 GLN GLN A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 PRO 41 40 40 PRO PRO A . n A 1 42 ASN 42 41 41 ASN ASN A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 TRP 45 44 44 TRP TRP A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 ASP 47 46 46 ASP ASP A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 TRP 53 52 52 TRP TRP A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 MET 55 54 54 MET MET A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 THR 61 60 60 THR THR A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 ASN 63 62 62 ASN ASN A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 LYS 70 69 69 LYS LYS A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 GLN 74 73 73 GLN GLN A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 GLN 78 77 77 GLN GLN A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 GLY 81 80 ? ? ? A . n A 1 82 LYS 82 81 ? ? ? A . n A 1 83 ASN 83 82 ? ? ? A . n A 1 84 LYS 84 83 83 LYS LYS A . n A 1 85 SER 85 84 84 SER SER A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 ARG 92 91 91 ARG ARG A . n A 1 93 LYS 93 92 92 LYS LYS A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 GLU 98 97 97 GLU GLU A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 PHE 103 102 102 PHE PHE A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 MET 107 106 106 MET MET A . n A 1 108 LYS 108 107 107 LYS LYS A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 ASN 111 110 110 ASN ASN A . n A 1 112 ALA 112 111 111 ALA ALA A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 GLN 114 113 113 GLN GLN A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 TYR 117 116 116 TYR TYR A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 ARG 120 119 119 ARG ARG A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 ARG 122 121 121 ARG ARG A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 HIS 128 127 ? ? ? A . n A 1 129 HIS 129 128 ? ? ? A . n A 1 130 HIS 130 129 ? ? ? A . n A 1 131 HIS 131 130 ? ? ? A . n A 1 132 HIS 132 131 ? ? ? A . n A 1 133 HIS 133 132 ? ? ? A . n B 1 1 FME 1 0 0 FME FME B . n B 1 2 ARG 2 1 1 ARG ARG B . n B 1 3 ASP 3 2 2 ASP ASP B . n B 1 4 LYS 4 3 3 LYS LYS B . n B 1 5 PHE 5 4 4 PHE PHE B . n B 1 6 MET 6 5 5 MET MET B . n B 1 7 ASP 7 6 6 ASP ASP B . n B 1 8 GLU 8 7 7 GLU GLU B . n B 1 9 PHE 9 8 8 PHE PHE B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 GLN 12 11 11 GLN GLN B . n B 1 13 VAL 13 12 12 VAL VAL B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 GLU 15 14 14 GLU GLU B . n B 1 16 ILE 16 15 15 ILE ILE B . n B 1 17 ARG 17 16 16 ARG ARG B . n B 1 18 GLN 18 17 17 GLN GLN B . n B 1 19 TYR 19 18 18 TYR TYR B . n B 1 20 ILE 20 19 19 ILE ILE B . n B 1 21 ASP 21 20 20 ASP ASP B . n B 1 22 ARG 22 21 21 ARG ARG B . n B 1 23 ILE 23 22 22 ILE ILE B . n B 1 24 ALA 24 23 23 ALA ALA B . n B 1 25 GLU 25 24 24 GLU GLU B . n B 1 26 ASN 26 25 25 ASN ASN B . n B 1 27 VAL 27 26 26 VAL VAL B . n B 1 28 GLU 28 27 27 GLU GLU B . n B 1 29 GLU 29 28 28 GLU GLU B . n B 1 30 VAL 30 29 29 VAL VAL B . n B 1 31 ALA 31 30 30 ALA ALA B . n B 1 32 ARG 32 31 31 ARG ARG B . n B 1 33 GLN 33 32 32 GLN GLN B . n B 1 34 HIS 34 33 33 HIS HIS B . n B 1 35 GLN 35 34 34 GLN GLN B . n B 1 36 ALA 36 35 35 ALA ALA B . n B 1 37 ILE 37 36 36 ILE ILE B . n B 1 38 LEU 38 37 37 LEU LEU B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 SER 40 39 39 SER SER B . n B 1 41 PRO 41 40 40 PRO PRO B . n B 1 42 ASN 42 41 41 ASN ASN B . n B 1 43 PRO 43 42 42 PRO PRO B . n B 1 44 ASN 44 43 43 ASN ASN B . n B 1 45 TRP 45 44 44 TRP TRP B . n B 1 46 PHE 46 45 45 PHE PHE B . n B 1 47 ASP 47 46 46 ASP ASP B . n B 1 48 ILE 48 47 47 ILE ILE B . n B 1 49 SER 49 48 48 SER SER B . n B 1 50 GLN 50 49 49 GLN GLN B . n B 1 51 LEU 51 50 50 LEU LEU B . n B 1 52 LEU 52 51 51 LEU LEU B . n B 1 53 TRP 53 52 52 TRP TRP B . n B 1 54 LEU 54 53 53 LEU LEU B . n B 1 55 MET 55 54 54 MET MET B . n B 1 56 ALA 56 55 55 ALA ALA B . n B 1 57 ASP 57 56 56 ASP ASP B . n B 1 58 ILE 58 57 57 ILE ILE B . n B 1 59 LYS 59 58 58 LYS LYS B . n B 1 60 GLU 60 59 59 GLU GLU B . n B 1 61 THR 61 60 60 THR THR B . n B 1 62 ALA 62 61 61 ALA ALA B . n B 1 63 ASN 63 62 62 ASN ASN B . n B 1 64 GLU 64 63 63 GLU GLU B . n B 1 65 VAL 65 64 64 VAL VAL B . n B 1 66 ARG 66 65 65 ARG ARG B . n B 1 67 LYS 67 66 66 LYS LYS B . n B 1 68 LYS 68 67 67 LYS LYS B . n B 1 69 LEU 69 68 68 LEU LEU B . n B 1 70 LYS 70 69 69 LYS LYS B . n B 1 71 GLU 71 70 70 GLU GLU B . n B 1 72 ILE 72 71 71 ILE ILE B . n B 1 73 GLU 73 72 72 GLU GLU B . n B 1 74 GLN 74 73 73 GLN GLN B . n B 1 75 SER 75 74 74 SER SER B . n B 1 76 ILE 76 75 75 ILE ILE B . n B 1 77 GLU 77 76 76 GLU GLU B . n B 1 78 GLN 78 77 77 GLN GLN B . n B 1 79 GLU 79 78 78 GLU GLU B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 GLY 81 80 ? ? ? B . n B 1 82 LYS 82 81 ? ? ? B . n B 1 83 ASN 83 82 ? ? ? B . n B 1 84 LYS 84 83 83 LYS LYS B . n B 1 85 SER 85 84 84 SER SER B . n B 1 86 SER 86 85 85 SER SER B . n B 1 87 ALA 87 86 86 ALA ALA B . n B 1 88 ASP 88 87 87 ASP ASP B . n B 1 89 LEU 89 88 88 LEU LEU B . n B 1 90 LYS 90 89 89 LYS LYS B . n B 1 91 ILE 91 90 90 ILE ILE B . n B 1 92 ARG 92 91 91 ARG ARG B . n B 1 93 LYS 93 92 92 LYS LYS B . n B 1 94 ARG 94 93 93 ARG ARG B . n B 1 95 GLN 95 94 94 GLN GLN B . n B 1 96 HIS 96 95 95 HIS HIS B . n B 1 97 GLU 97 96 96 GLU GLU B . n B 1 98 GLU 98 97 97 GLU GLU B . n B 1 99 LEU 99 98 98 LEU LEU B . n B 1 100 GLU 100 99 99 GLU GLU B . n B 1 101 ARG 101 100 100 ARG ARG B . n B 1 102 LYS 102 101 101 LYS LYS B . n B 1 103 PHE 103 102 102 PHE PHE B . n B 1 104 ARG 104 103 103 ARG ARG B . n B 1 105 GLU 105 104 104 GLU GLU B . n B 1 106 VAL 106 105 105 VAL VAL B . n B 1 107 MET 107 106 106 MET MET B . n B 1 108 LYS 108 107 107 LYS LYS B . n B 1 109 GLU 109 108 108 GLU GLU B . n B 1 110 TYR 110 109 109 TYR TYR B . n B 1 111 ASN 111 110 110 ASN ASN B . n B 1 112 ALA 112 111 111 ALA ALA B . n B 1 113 THR 113 112 112 THR THR B . n B 1 114 GLN 114 113 113 GLN GLN B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 ASP 116 115 115 ASP ASP B . n B 1 117 TYR 117 116 116 TYR TYR B . n B 1 118 ARG 118 117 117 ARG ARG B . n B 1 119 LYS 119 118 118 LYS LYS B . n B 1 120 ARG 120 119 119 ARG ARG B . n B 1 121 ALA 121 120 120 ALA ALA B . n B 1 122 ARG 122 121 121 ARG ARG B . n B 1 123 LYS 123 122 122 LYS LYS B . n B 1 124 ARG 124 123 123 ARG ARG B . n B 1 125 ASN 125 124 124 ASN ASN B . n B 1 126 LEU 126 125 125 LEU LEU B . n B 1 127 GLU 127 126 126 GLU GLU B . n B 1 128 HIS 128 127 ? ? ? B . n B 1 129 HIS 129 128 ? ? ? B . n B 1 130 HIS 130 129 ? ? ? B . n B 1 131 HIS 131 130 ? ? ? B . n B 1 132 HIS 132 131 ? ? ? B . n B 1 133 HIS 133 132 ? ? ? B . n C 1 1 FME 1 0 ? ? ? C . n C 1 2 ARG 2 1 1 ARG ARG C . n C 1 3 ASP 3 2 2 ASP ASP C . n C 1 4 LYS 4 3 3 LYS LYS C . n C 1 5 PHE 5 4 4 PHE PHE C . n C 1 6 MET 6 5 5 MET MET C . n C 1 7 ASP 7 6 6 ASP ASP C . n C 1 8 GLU 8 7 7 GLU GLU C . n C 1 9 PHE 9 8 8 PHE PHE C . n C 1 10 PHE 10 9 9 PHE PHE C . n C 1 11 LYS 11 10 10 LYS LYS C . n C 1 12 GLN 12 11 11 GLN GLN C . n C 1 13 VAL 13 12 12 VAL VAL C . n C 1 14 GLU 14 13 13 GLU GLU C . n C 1 15 GLU 15 14 14 GLU GLU C . n C 1 16 ILE 16 15 15 ILE ILE C . n C 1 17 ARG 17 16 16 ARG ARG C . n C 1 18 GLN 18 17 17 GLN GLN C . n C 1 19 TYR 19 18 18 TYR TYR C . n C 1 20 ILE 20 19 19 ILE ILE C . n C 1 21 ASP 21 20 20 ASP ASP C . n C 1 22 ARG 22 21 21 ARG ARG C . n C 1 23 ILE 23 22 22 ILE ILE C . n C 1 24 ALA 24 23 23 ALA ALA C . n C 1 25 GLU 25 24 24 GLU GLU C . n C 1 26 ASN 26 25 25 ASN ASN C . n C 1 27 VAL 27 26 26 VAL VAL C . n C 1 28 GLU 28 27 27 GLU GLU C . n C 1 29 GLU 29 28 28 GLU GLU C . n C 1 30 VAL 30 29 29 VAL VAL C . n C 1 31 ALA 31 30 30 ALA ALA C . n C 1 32 ARG 32 31 31 ARG ARG C . n C 1 33 GLN 33 32 32 GLN GLN C . n C 1 34 HIS 34 33 33 HIS HIS C . n C 1 35 GLN 35 34 34 GLN GLN C . n C 1 36 ALA 36 35 35 ALA ALA C . n C 1 37 ILE 37 36 36 ILE ILE C . n C 1 38 LEU 38 37 37 LEU LEU C . n C 1 39 ALA 39 38 38 ALA ALA C . n C 1 40 SER 40 39 39 SER SER C . n C 1 41 PRO 41 40 40 PRO PRO C . n C 1 42 ASN 42 41 41 ASN ASN C . n C 1 43 PRO 43 42 42 PRO PRO C . n C 1 44 ASN 44 43 43 ASN ASN C . n C 1 45 TRP 45 44 44 TRP TRP C . n C 1 46 PHE 46 45 45 PHE PHE C . n C 1 47 ASP 47 46 46 ASP ASP C . n C 1 48 ILE 48 47 47 ILE ILE C . n C 1 49 SER 49 48 48 SER SER C . n C 1 50 GLN 50 49 49 GLN GLN C . n C 1 51 LEU 51 50 50 LEU LEU C . n C 1 52 LEU 52 51 51 LEU LEU C . n C 1 53 TRP 53 52 52 TRP TRP C . n C 1 54 LEU 54 53 53 LEU LEU C . n C 1 55 MET 55 54 54 MET MET C . n C 1 56 ALA 56 55 55 ALA ALA C . n C 1 57 ASP 57 56 56 ASP ASP C . n C 1 58 ILE 58 57 57 ILE ILE C . n C 1 59 LYS 59 58 58 LYS LYS C . n C 1 60 GLU 60 59 59 GLU GLU C . n C 1 61 THR 61 60 60 THR THR C . n C 1 62 ALA 62 61 61 ALA ALA C . n C 1 63 ASN 63 62 62 ASN ASN C . n C 1 64 GLU 64 63 63 GLU GLU C . n C 1 65 VAL 65 64 64 VAL VAL C . n C 1 66 ARG 66 65 65 ARG ARG C . n C 1 67 LYS 67 66 66 LYS LYS C . n C 1 68 LYS 68 67 67 LYS LYS C . n C 1 69 LEU 69 68 68 LEU LEU C . n C 1 70 LYS 70 69 69 LYS LYS C . n C 1 71 GLU 71 70 70 GLU GLU C . n C 1 72 ILE 72 71 71 ILE ILE C . n C 1 73 GLU 73 72 72 GLU GLU C . n C 1 74 GLN 74 73 73 GLN GLN C . n C 1 75 SER 75 74 74 SER SER C . n C 1 76 ILE 76 75 75 ILE ILE C . n C 1 77 GLU 77 76 76 GLU GLU C . n C 1 78 GLN 78 77 77 GLN GLN C . n C 1 79 GLU 79 78 78 GLU GLU C . n C 1 80 GLU 80 79 79 GLU GLU C . n C 1 81 GLY 81 80 ? ? ? C . n C 1 82 LYS 82 81 ? ? ? C . n C 1 83 ASN 83 82 ? ? ? C . n C 1 84 LYS 84 83 ? ? ? C . n C 1 85 SER 85 84 84 SER SER C . n C 1 86 SER 86 85 85 SER SER C . n C 1 87 ALA 87 86 86 ALA ALA C . n C 1 88 ASP 88 87 87 ASP ASP C . n C 1 89 LEU 89 88 88 LEU LEU C . n C 1 90 LYS 90 89 89 LYS LYS C . n C 1 91 ILE 91 90 90 ILE ILE C . n C 1 92 ARG 92 91 91 ARG ARG C . n C 1 93 LYS 93 92 92 LYS LYS C . n C 1 94 ARG 94 93 93 ARG ARG C . n C 1 95 GLN 95 94 94 GLN GLN C . n C 1 96 HIS 96 95 95 HIS HIS C . n C 1 97 GLU 97 96 96 GLU GLU C . n C 1 98 GLU 98 97 97 GLU GLU C . n C 1 99 LEU 99 98 98 LEU LEU C . n C 1 100 GLU 100 99 99 GLU GLU C . n C 1 101 ARG 101 100 100 ARG ARG C . n C 1 102 LYS 102 101 101 LYS LYS C . n C 1 103 PHE 103 102 102 PHE PHE C . n C 1 104 ARG 104 103 103 ARG ARG C . n C 1 105 GLU 105 104 104 GLU GLU C . n C 1 106 VAL 106 105 105 VAL VAL C . n C 1 107 MET 107 106 106 MET MET C . n C 1 108 LYS 108 107 107 LYS LYS C . n C 1 109 GLU 109 108 108 GLU GLU C . n C 1 110 TYR 110 109 109 TYR TYR C . n C 1 111 ASN 111 110 110 ASN ASN C . n C 1 112 ALA 112 111 111 ALA ALA C . n C 1 113 THR 113 112 112 THR THR C . n C 1 114 GLN 114 113 113 GLN GLN C . n C 1 115 GLN 115 114 114 GLN GLN C . n C 1 116 ASP 116 115 115 ASP ASP C . n C 1 117 TYR 117 116 116 TYR TYR C . n C 1 118 ARG 118 117 117 ARG ARG C . n C 1 119 LYS 119 118 118 LYS LYS C . n C 1 120 ARG 120 119 119 ARG ARG C . n C 1 121 ALA 121 120 120 ALA ALA C . n C 1 122 ARG 122 121 121 ARG ARG C . n C 1 123 LYS 123 122 122 LYS LYS C . n C 1 124 ARG 124 123 123 ARG ARG C . n C 1 125 ASN 125 124 124 ASN ASN C . n C 1 126 LEU 126 125 125 LEU LEU C . n C 1 127 GLU 127 126 126 GLU GLU C . n C 1 128 HIS 128 127 ? ? ? C . n C 1 129 HIS 129 128 ? ? ? C . n C 1 130 HIS 130 129 ? ? ? C . n C 1 131 HIS 131 130 ? ? ? C . n C 1 132 HIS 132 131 ? ? ? C . n C 1 133 HIS 133 132 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 1 133 1 SO4 SO4 A . E 2 SO4 1 134 6 SO4 SO4 A . F 2 SO4 1 135 8 SO4 SO4 A . G 2 SO4 1 136 12 SO4 SO4 A . H 2 SO4 1 133 2 SO4 SO4 B . I 2 SO4 1 134 4 SO4 SO4 B . J 2 SO4 1 135 7 SO4 SO4 B . K 2 SO4 1 136 10 SO4 SO4 B . L 2 SO4 1 133 3 SO4 SO4 C . M 2 SO4 1 134 5 SO4 SO4 C . N 2 SO4 1 135 9 SO4 SO4 C . O 3 HOH 1 137 1 HOH HOH A . O 3 HOH 2 138 5 HOH HOH A . O 3 HOH 3 139 12 HOH HOH A . O 3 HOH 4 140 13 HOH HOH A . O 3 HOH 5 141 14 HOH HOH A . O 3 HOH 6 142 22 HOH HOH A . O 3 HOH 7 143 25 HOH HOH A . O 3 HOH 8 144 31 HOH HOH A . O 3 HOH 9 145 33 HOH HOH A . O 3 HOH 10 146 34 HOH HOH A . O 3 HOH 11 147 35 HOH HOH A . O 3 HOH 12 148 36 HOH HOH A . O 3 HOH 13 149 44 HOH HOH A . O 3 HOH 14 150 47 HOH HOH A . O 3 HOH 15 151 48 HOH HOH A . O 3 HOH 16 152 50 HOH HOH A . O 3 HOH 17 153 52 HOH HOH A . O 3 HOH 18 154 53 HOH HOH A . O 3 HOH 19 155 56 HOH HOH A . O 3 HOH 20 156 57 HOH HOH A . O 3 HOH 21 157 62 HOH HOH A . O 3 HOH 22 158 63 HOH HOH A . O 3 HOH 23 159 64 HOH HOH A . O 3 HOH 24 160 65 HOH HOH A . O 3 HOH 25 161 66 HOH HOH A . O 3 HOH 26 162 67 HOH HOH A . O 3 HOH 27 163 75 HOH HOH A . O 3 HOH 28 164 76 HOH HOH A . O 3 HOH 29 165 84 HOH HOH A . O 3 HOH 30 166 86 HOH HOH A . O 3 HOH 31 167 87 HOH HOH A . O 3 HOH 32 168 91 HOH HOH A . O 3 HOH 33 169 93 HOH HOH A . P 3 HOH 1 137 4 HOH HOH B . P 3 HOH 2 138 6 HOH HOH B . P 3 HOH 3 139 7 HOH HOH B . P 3 HOH 4 140 8 HOH HOH B . P 3 HOH 5 141 9 HOH HOH B . P 3 HOH 6 142 10 HOH HOH B . P 3 HOH 7 143 15 HOH HOH B . P 3 HOH 8 144 16 HOH HOH B . P 3 HOH 9 145 17 HOH HOH B . P 3 HOH 10 146 18 HOH HOH B . P 3 HOH 11 147 21 HOH HOH B . P 3 HOH 12 148 24 HOH HOH B . P 3 HOH 13 149 28 HOH HOH B . P 3 HOH 14 150 29 HOH HOH B . P 3 HOH 15 151 30 HOH HOH B . P 3 HOH 16 152 37 HOH HOH B . P 3 HOH 17 153 38 HOH HOH B . P 3 HOH 18 154 39 HOH HOH B . P 3 HOH 19 155 40 HOH HOH B . P 3 HOH 20 156 41 HOH HOH B . P 3 HOH 21 157 42 HOH HOH B . P 3 HOH 22 158 43 HOH HOH B . P 3 HOH 23 159 54 HOH HOH B . P 3 HOH 24 160 55 HOH HOH B . P 3 HOH 25 161 59 HOH HOH B . P 3 HOH 26 162 68 HOH HOH B . P 3 HOH 27 163 69 HOH HOH B . P 3 HOH 28 164 70 HOH HOH B . P 3 HOH 29 165 71 HOH HOH B . P 3 HOH 30 166 73 HOH HOH B . P 3 HOH 31 167 74 HOH HOH B . P 3 HOH 32 168 80 HOH HOH B . P 3 HOH 33 169 85 HOH HOH B . P 3 HOH 34 170 88 HOH HOH B . P 3 HOH 35 171 90 HOH HOH B . P 3 HOH 36 172 92 HOH HOH B . Q 3 HOH 1 136 2 HOH HOH C . Q 3 HOH 2 137 3 HOH HOH C . Q 3 HOH 3 138 11 HOH HOH C . Q 3 HOH 4 139 19 HOH HOH C . Q 3 HOH 5 140 20 HOH HOH C . Q 3 HOH 6 141 23 HOH HOH C . Q 3 HOH 7 142 26 HOH HOH C . Q 3 HOH 8 143 27 HOH HOH C . Q 3 HOH 9 144 32 HOH HOH C . Q 3 HOH 10 145 45 HOH HOH C . Q 3 HOH 11 146 46 HOH HOH C . Q 3 HOH 12 147 49 HOH HOH C . Q 3 HOH 13 148 51 HOH HOH C . Q 3 HOH 14 149 58 HOH HOH C . Q 3 HOH 15 150 60 HOH HOH C . Q 3 HOH 16 151 61 HOH HOH C . Q 3 HOH 17 152 72 HOH HOH C . Q 3 HOH 18 153 77 HOH HOH C . Q 3 HOH 19 154 78 HOH HOH C . Q 3 HOH 20 155 79 HOH HOH C . Q 3 HOH 21 156 81 HOH HOH C . Q 3 HOH 22 157 82 HOH HOH C . Q 3 HOH 23 158 83 HOH HOH C . Q 3 HOH 24 159 89 HOH HOH C . Q 3 HOH 25 160 94 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A FME 1 A FME 0 ? MET N-FORMYLMETHIONINE 2 B FME 1 B FME 0 ? MET N-FORMYLMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5350 ? 1 MORE -166 ? 1 'SSA (A^2)' 22660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 3.2220 1.9790 -24.9400 0.3226 0.3360 0.2033 0.0108 -0.0048 -0.0782 11.7811 18.4859 2.3218 13.8851 -4.3887 -4.9828 0.2203 0.1972 0.6605 0.2515 0.1246 0.8438 -0.1365 -0.3250 -0.3449 'X-RAY DIFFRACTION' 2 ? refined 10.0970 5.6700 -19.6830 0.4310 0.2847 0.1805 -0.0167 0.0532 -0.0386 3.6799 18.7453 0.6834 7.6265 -0.4966 -2.3753 0.3231 -0.1013 -0.1130 1.0353 -0.1944 -0.4760 0.0225 -0.0966 -0.1287 'X-RAY DIFFRACTION' 3 ? refined 0.8690 -23.4800 -16.5620 0.5869 0.0791 0.4080 -0.0293 -0.0037 0.2844 41.8274 8.4029 38.0478 10.2455 38.0586 4.8340 0.5802 0.3909 -2.3607 1.7918 -0.6031 -1.5197 1.4344 -0.4058 0.0229 'X-RAY DIFFRACTION' 4 ? refined 7.5550 -8.5670 -26.3090 0.3436 0.2503 0.2267 0.0087 -0.0058 -0.0638 15.4359 19.9485 2.1586 16.8115 -4.6354 -5.5925 -0.1568 0.3251 -0.4773 -0.0289 0.3713 -0.6112 -0.0655 -0.2375 -0.2145 'X-RAY DIFFRACTION' 5 ? refined 26.6290 12.4600 -34.1980 0.3630 0.2884 0.1638 -0.0895 0.0764 -0.1899 18.0313 15.5378 9.9095 0.9125 -5.6277 -7.2052 0.0840 0.7298 1.2407 -0.1145 0.6510 0.1930 -0.4789 0.0207 -0.7349 'X-RAY DIFFRACTION' 6 ? refined -4.0710 18.6390 0.9630 0.3276 0.3230 0.2304 0.0726 0.0567 0.0684 16.1822 1.9711 12.7854 5.1219 -13.2821 -4.5436 0.0555 -0.8599 -0.7057 0.5064 -0.2115 -0.0391 -0.1932 0.7457 0.1559 'X-RAY DIFFRACTION' 7 ? refined 16.9000 23.3030 -15.4660 0.2915 0.2825 0.2382 0.0249 -0.0166 0.0106 6.6298 1.8748 3.2465 1.9615 -0.2760 -1.2123 -0.0093 0.0854 -0.1713 0.0678 -0.0926 -0.2813 -0.1131 0.2131 0.1020 'X-RAY DIFFRACTION' 8 ? refined -9.4400 11.4460 -6.2440 0.2936 0.2644 0.3990 -0.0190 0.1336 -0.0501 39.7874 2.1839 8.7413 5.0481 -14.4183 -1.9490 -0.6820 0.7958 -2.4929 0.0278 -0.1016 0.1961 0.5396 -0.7843 0.7836 'X-RAY DIFFRACTION' 9 ? refined -12.4520 21.1780 -5.8280 0.2892 0.3865 0.2877 0.0362 0.0186 0.0294 16.6131 2.4252 11.5776 5.4110 -13.7311 -4.6016 0.1415 0.4717 0.3117 0.0509 0.1342 0.2440 -0.2580 -0.5805 -0.2756 'X-RAY DIFFRACTION' 10 ? refined 10.9280 30.3290 -26.8920 0.3334 0.2407 0.2148 0.0320 0.0394 0.0435 6.5245 6.1738 11.7941 0.3627 -3.4703 0.9738 0.7962 0.1049 0.2654 0.0454 -0.4070 -0.1380 -1.3219 0.2613 -0.3892 'X-RAY DIFFRACTION' 11 ? refined 14.2620 -4.7110 7.4340 0.3223 0.2159 0.2690 -0.0688 -0.0571 0.1158 5.8924 12.5015 24.1197 6.5403 -8.0825 -16.2440 0.0141 -0.2319 -0.5634 -0.3646 -0.3680 0.0660 0.2049 -1.0889 0.3540 'X-RAY DIFFRACTION' 12 ? refined 20.6980 9.6920 -12.1990 0.2845 0.2731 0.3231 0.0659 0.0121 0.0112 1.5312 3.3621 9.8648 0.1143 0.3214 -3.3364 -0.0479 0.5736 -0.4290 -0.3863 -0.1607 -0.4238 0.2794 0.0313 0.2085 'X-RAY DIFFRACTION' 13 ? refined 7.8810 1.8170 16.6590 0.1929 0.5183 0.2075 -0.0120 0.1091 0.0640 7.6671 15.3412 18.9248 -0.5625 -0.0542 -10.2963 0.2166 -0.5536 0.0857 0.7489 1.0022 1.2928 -0.8704 -2.4248 -1.2188 'X-RAY DIFFRACTION' 14 ? refined 18.6110 3.1280 13.9980 0.2764 0.3114 0.2585 -0.0252 -0.0098 0.0805 6.3821 14.8261 35.6109 8.3354 -6.3592 -19.0447 0.1226 -0.5002 -0.1513 0.4138 -0.5208 -0.3125 -0.8372 0.5754 0.3982 'X-RAY DIFFRACTION' 15 ? refined 27.2300 21.2350 -8.7250 0.2234 0.3723 0.2364 -0.0030 -0.0444 0.0980 0.9382 13.1017 7.1455 2.7017 -0.7991 -5.7831 -0.0786 -0.0296 0.1367 0.0752 -0.2336 -0.5840 -0.1531 0.4859 0.3122 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 41 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 42 ? ? A 73 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 74 ? ? A 87 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 88 ? ? A 113 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 114 ? ? A 126 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 0 ? ? B 31 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 32 ? ? B 56 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 57 ? ? B 79 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 83 ? ? B 113 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 114 ? ? B 126 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 C 1 ? ? C 26 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 C 27 ? ? C 64 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 C 65 ? ? C 86 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 C 87 ? ? C 108 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 C 109 ? ? C 126 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 CrystalClear 'data reduction' . ? 4 CrystalClear 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? CG ? A LYS 4 CG 2 1 Y 1 A LYS 3 ? CD ? A LYS 4 CD 3 1 Y 1 A LYS 3 ? CE ? A LYS 4 CE 4 1 Y 1 A LYS 3 ? NZ ? A LYS 4 NZ 5 1 Y 1 A LYS 10 ? CG ? A LYS 11 CG 6 1 Y 1 A LYS 10 ? CD ? A LYS 11 CD 7 1 Y 1 A LYS 10 ? CE ? A LYS 11 CE 8 1 Y 1 A LYS 10 ? NZ ? A LYS 11 NZ 9 1 Y 1 A GLU 27 ? CD ? A GLU 28 CD 10 1 Y 1 A GLU 27 ? OE1 ? A GLU 28 OE1 11 1 Y 1 A GLU 27 ? OE2 ? A GLU 28 OE2 12 1 Y 1 A GLN 34 ? CD ? A GLN 35 CD 13 1 Y 1 A GLN 34 ? OE1 ? A GLN 35 OE1 14 1 Y 1 A GLN 34 ? NE2 ? A GLN 35 NE2 15 1 Y 1 A LYS 66 ? CE ? A LYS 67 CE 16 1 Y 1 A LYS 66 ? NZ ? A LYS 67 NZ 17 1 Y 1 A LYS 67 ? CD ? A LYS 68 CD 18 1 Y 1 A LYS 67 ? CE ? A LYS 68 CE 19 1 Y 1 A LYS 67 ? NZ ? A LYS 68 NZ 20 1 Y 1 A GLU 78 ? CG ? A GLU 79 CG 21 1 Y 1 A GLU 78 ? CD ? A GLU 79 CD 22 1 Y 1 A GLU 78 ? OE1 ? A GLU 79 OE1 23 1 Y 1 A GLU 78 ? OE2 ? A GLU 79 OE2 24 1 Y 1 A LYS 101 ? CD ? A LYS 102 CD 25 1 Y 1 A LYS 101 ? CE ? A LYS 102 CE 26 1 Y 1 A LYS 101 ? NZ ? A LYS 102 NZ 27 1 Y 1 A ARG 103 ? CD ? A ARG 104 CD 28 1 Y 1 A ARG 103 ? NE ? A ARG 104 NE 29 1 Y 1 A ARG 103 ? CZ ? A ARG 104 CZ 30 1 Y 1 A ARG 103 ? NH1 ? A ARG 104 NH1 31 1 Y 1 A ARG 103 ? NH2 ? A ARG 104 NH2 32 1 Y 1 A GLU 108 ? CD ? A GLU 109 CD 33 1 Y 1 A GLU 108 ? OE1 ? A GLU 109 OE1 34 1 Y 1 A GLU 108 ? OE2 ? A GLU 109 OE2 35 1 Y 1 A ARG 123 ? CD ? A ARG 124 CD 36 1 Y 1 A ARG 123 ? NE ? A ARG 124 NE 37 1 Y 1 A ARG 123 ? CZ ? A ARG 124 CZ 38 1 Y 1 A ARG 123 ? NH1 ? A ARG 124 NH1 39 1 Y 1 A ARG 123 ? NH2 ? A ARG 124 NH2 40 1 Y 1 A GLU 126 ? CG ? A GLU 127 CG 41 1 Y 1 A GLU 126 ? CD ? A GLU 127 CD 42 1 Y 1 A GLU 126 ? OE1 ? A GLU 127 OE1 43 1 Y 1 A GLU 126 ? OE2 ? A GLU 127 OE2 44 1 Y 1 B LYS 3 ? CD ? B LYS 4 CD 45 1 Y 1 B LYS 3 ? CE ? B LYS 4 CE 46 1 Y 1 B LYS 3 ? NZ ? B LYS 4 NZ 47 1 Y 1 B ARG 31 ? CZ ? B ARG 32 CZ 48 1 Y 1 B ARG 31 ? NH1 ? B ARG 32 NH1 49 1 Y 1 B ARG 31 ? NH2 ? B ARG 32 NH2 50 1 Y 1 B GLN 34 ? CG ? B GLN 35 CG 51 1 Y 1 B GLN 34 ? CD ? B GLN 35 CD 52 1 Y 1 B GLN 34 ? OE1 ? B GLN 35 OE1 53 1 Y 1 B GLN 34 ? NE2 ? B GLN 35 NE2 54 1 Y 1 B LYS 66 ? CE ? B LYS 67 CE 55 1 Y 1 B LYS 66 ? NZ ? B LYS 67 NZ 56 1 Y 1 B LYS 67 ? CE ? B LYS 68 CE 57 1 Y 1 B LYS 67 ? NZ ? B LYS 68 NZ 58 1 Y 1 B GLN 77 ? CD ? B GLN 78 CD 59 1 Y 1 B GLN 77 ? OE1 ? B GLN 78 OE1 60 1 Y 1 B GLN 77 ? NE2 ? B GLN 78 NE2 61 1 Y 1 B GLU 78 ? CG ? B GLU 79 CG 62 1 Y 1 B GLU 78 ? CD ? B GLU 79 CD 63 1 Y 1 B GLU 78 ? OE1 ? B GLU 79 OE1 64 1 Y 1 B GLU 78 ? OE2 ? B GLU 79 OE2 65 1 Y 1 B LYS 101 ? CE ? B LYS 102 CE 66 1 Y 1 B LYS 101 ? NZ ? B LYS 102 NZ 67 1 Y 1 B ARG 103 ? CG ? B ARG 104 CG 68 1 Y 1 B ARG 103 ? CD ? B ARG 104 CD 69 1 Y 1 B ARG 103 ? NE ? B ARG 104 NE 70 1 Y 1 B ARG 103 ? CZ ? B ARG 104 CZ 71 1 Y 1 B ARG 103 ? NH1 ? B ARG 104 NH1 72 1 Y 1 B ARG 103 ? NH2 ? B ARG 104 NH2 73 1 Y 1 C LYS 3 ? CD ? C LYS 4 CD 74 1 Y 1 C LYS 3 ? CE ? C LYS 4 CE 75 1 Y 1 C LYS 3 ? NZ ? C LYS 4 NZ 76 1 Y 1 C LYS 10 ? CG ? C LYS 11 CG 77 1 Y 1 C LYS 10 ? CD ? C LYS 11 CD 78 1 Y 1 C LYS 10 ? CE ? C LYS 11 CE 79 1 Y 1 C LYS 10 ? NZ ? C LYS 11 NZ 80 1 Y 1 C GLU 27 ? CG ? C GLU 28 CG 81 1 Y 1 C GLU 27 ? CD ? C GLU 28 CD 82 1 Y 1 C GLU 27 ? OE1 ? C GLU 28 OE1 83 1 Y 1 C GLU 27 ? OE2 ? C GLU 28 OE2 84 1 Y 1 C GLU 28 ? CD ? C GLU 29 CD 85 1 Y 1 C GLU 28 ? OE1 ? C GLU 29 OE1 86 1 Y 1 C GLU 28 ? OE2 ? C GLU 29 OE2 87 1 Y 1 C ARG 31 ? NH1 ? C ARG 32 NH1 88 1 Y 1 C ARG 31 ? NH2 ? C ARG 32 NH2 89 1 Y 1 C LYS 66 ? CE ? C LYS 67 CE 90 1 Y 1 C LYS 66 ? NZ ? C LYS 67 NZ 91 1 Y 1 C LYS 69 ? CE ? C LYS 70 CE 92 1 Y 1 C LYS 69 ? NZ ? C LYS 70 NZ 93 1 Y 1 C GLN 77 ? OE1 ? C GLN 78 OE1 94 1 Y 1 C GLN 77 ? NE2 ? C GLN 78 NE2 95 1 Y 1 C LYS 92 ? CE ? C LYS 93 CE 96 1 Y 1 C LYS 92 ? NZ ? C LYS 93 NZ 97 1 Y 1 C GLU 99 ? CD ? C GLU 100 CD 98 1 Y 1 C GLU 99 ? OE1 ? C GLU 100 OE1 99 1 Y 1 C GLU 99 ? OE2 ? C GLU 100 OE2 100 1 Y 1 C ARG 103 ? NH1 ? C ARG 104 NH1 101 1 Y 1 C ARG 103 ? NH2 ? C ARG 104 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 80 ? A GLY 81 2 1 Y 1 A LYS 81 ? A LYS 82 3 1 Y 1 A ASN 82 ? A ASN 83 4 1 Y 1 A HIS 127 ? A HIS 128 5 1 Y 1 A HIS 128 ? A HIS 129 6 1 Y 1 A HIS 129 ? A HIS 130 7 1 Y 1 A HIS 130 ? A HIS 131 8 1 Y 1 A HIS 131 ? A HIS 132 9 1 Y 1 A HIS 132 ? A HIS 133 10 1 Y 1 B GLY 80 ? B GLY 81 11 1 Y 1 B LYS 81 ? B LYS 82 12 1 Y 1 B ASN 82 ? B ASN 83 13 1 Y 1 B HIS 127 ? B HIS 128 14 1 Y 1 B HIS 128 ? B HIS 129 15 1 Y 1 B HIS 129 ? B HIS 130 16 1 Y 1 B HIS 130 ? B HIS 131 17 1 Y 1 B HIS 131 ? B HIS 132 18 1 Y 1 B HIS 132 ? B HIS 133 19 1 Y 1 C FME 0 ? C FME 1 20 1 Y 1 C GLY 80 ? C GLY 81 21 1 Y 1 C LYS 81 ? C LYS 82 22 1 Y 1 C ASN 82 ? C ASN 83 23 1 Y 1 C LYS 83 ? C LYS 84 24 1 Y 1 C HIS 127 ? C HIS 128 25 1 Y 1 C HIS 128 ? C HIS 129 26 1 Y 1 C HIS 129 ? C HIS 130 27 1 Y 1 C HIS 130 ? C HIS 131 28 1 Y 1 C HIS 131 ? C HIS 132 29 1 Y 1 C HIS 132 ? C HIS 133 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 FME N N N N 74 FME CN C N N 75 FME O1 O N N 76 FME CA C N S 77 FME CB C N N 78 FME CG C N N 79 FME SD S N N 80 FME CE C N N 81 FME C C N N 82 FME O O N N 83 FME OXT O N N 84 FME H H N N 85 FME HCN H N N 86 FME HA H N N 87 FME HB2 H N N 88 FME HB3 H N N 89 FME HG2 H N N 90 FME HG3 H N N 91 FME HE1 H N N 92 FME HE2 H N N 93 FME HE3 H N N 94 FME HXT H N N 95 GLN N N N N 96 GLN CA C N S 97 GLN C C N N 98 GLN O O N N 99 GLN CB C N N 100 GLN CG C N N 101 GLN CD C N N 102 GLN OE1 O N N 103 GLN NE2 N N N 104 GLN OXT O N N 105 GLN H H N N 106 GLN H2 H N N 107 GLN HA H N N 108 GLN HB2 H N N 109 GLN HB3 H N N 110 GLN HG2 H N N 111 GLN HG3 H N N 112 GLN HE21 H N N 113 GLN HE22 H N N 114 GLN HXT H N N 115 GLU N N N N 116 GLU CA C N S 117 GLU C C N N 118 GLU O O N N 119 GLU CB C N N 120 GLU CG C N N 121 GLU CD C N N 122 GLU OE1 O N N 123 GLU OE2 O N N 124 GLU OXT O N N 125 GLU H H N N 126 GLU H2 H N N 127 GLU HA H N N 128 GLU HB2 H N N 129 GLU HB3 H N N 130 GLU HG2 H N N 131 GLU HG3 H N N 132 GLU HE2 H N N 133 GLU HXT H N N 134 GLY N N N N 135 GLY CA C N N 136 GLY C C N N 137 GLY O O N N 138 GLY OXT O N N 139 GLY H H N N 140 GLY H2 H N N 141 GLY HA2 H N N 142 GLY HA3 H N N 143 GLY HXT H N N 144 HIS N N N N 145 HIS CA C N S 146 HIS C C N N 147 HIS O O N N 148 HIS CB C N N 149 HIS CG C Y N 150 HIS ND1 N Y N 151 HIS CD2 C Y N 152 HIS CE1 C Y N 153 HIS NE2 N Y N 154 HIS OXT O N N 155 HIS H H N N 156 HIS H2 H N N 157 HIS HA H N N 158 HIS HB2 H N N 159 HIS HB3 H N N 160 HIS HD1 H N N 161 HIS HD2 H N N 162 HIS HE1 H N N 163 HIS HE2 H N N 164 HIS HXT H N N 165 HOH O O N N 166 HOH H1 H N N 167 HOH H2 H N N 168 ILE N N N N 169 ILE CA C N S 170 ILE C C N N 171 ILE O O N N 172 ILE CB C N S 173 ILE CG1 C N N 174 ILE CG2 C N N 175 ILE CD1 C N N 176 ILE OXT O N N 177 ILE H H N N 178 ILE H2 H N N 179 ILE HA H N N 180 ILE HB H N N 181 ILE HG12 H N N 182 ILE HG13 H N N 183 ILE HG21 H N N 184 ILE HG22 H N N 185 ILE HG23 H N N 186 ILE HD11 H N N 187 ILE HD12 H N N 188 ILE HD13 H N N 189 ILE HXT H N N 190 LEU N N N N 191 LEU CA C N S 192 LEU C C N N 193 LEU O O N N 194 LEU CB C N N 195 LEU CG C N N 196 LEU CD1 C N N 197 LEU CD2 C N N 198 LEU OXT O N N 199 LEU H H N N 200 LEU H2 H N N 201 LEU HA H N N 202 LEU HB2 H N N 203 LEU HB3 H N N 204 LEU HG H N N 205 LEU HD11 H N N 206 LEU HD12 H N N 207 LEU HD13 H N N 208 LEU HD21 H N N 209 LEU HD22 H N N 210 LEU HD23 H N N 211 LEU HXT H N N 212 LYS N N N N 213 LYS CA C N S 214 LYS C C N N 215 LYS O O N N 216 LYS CB C N N 217 LYS CG C N N 218 LYS CD C N N 219 LYS CE C N N 220 LYS NZ N N N 221 LYS OXT O N N 222 LYS H H N N 223 LYS H2 H N N 224 LYS HA H N N 225 LYS HB2 H N N 226 LYS HB3 H N N 227 LYS HG2 H N N 228 LYS HG3 H N N 229 LYS HD2 H N N 230 LYS HD3 H N N 231 LYS HE2 H N N 232 LYS HE3 H N N 233 LYS HZ1 H N N 234 LYS HZ2 H N N 235 LYS HZ3 H N N 236 LYS HXT H N N 237 MET N N N N 238 MET CA C N S 239 MET C C N N 240 MET O O N N 241 MET CB C N N 242 MET CG C N N 243 MET SD S N N 244 MET CE C N N 245 MET OXT O N N 246 MET H H N N 247 MET H2 H N N 248 MET HA H N N 249 MET HB2 H N N 250 MET HB3 H N N 251 MET HG2 H N N 252 MET HG3 H N N 253 MET HE1 H N N 254 MET HE2 H N N 255 MET HE3 H N N 256 MET HXT H N N 257 PHE N N N N 258 PHE CA C N S 259 PHE C C N N 260 PHE O O N N 261 PHE CB C N N 262 PHE CG C Y N 263 PHE CD1 C Y N 264 PHE CD2 C Y N 265 PHE CE1 C Y N 266 PHE CE2 C Y N 267 PHE CZ C Y N 268 PHE OXT O N N 269 PHE H H N N 270 PHE H2 H N N 271 PHE HA H N N 272 PHE HB2 H N N 273 PHE HB3 H N N 274 PHE HD1 H N N 275 PHE HD2 H N N 276 PHE HE1 H N N 277 PHE HE2 H N N 278 PHE HZ H N N 279 PHE HXT H N N 280 PRO N N N N 281 PRO CA C N S 282 PRO C C N N 283 PRO O O N N 284 PRO CB C N N 285 PRO CG C N N 286 PRO CD C N N 287 PRO OXT O N N 288 PRO H H N N 289 PRO HA H N N 290 PRO HB2 H N N 291 PRO HB3 H N N 292 PRO HG2 H N N 293 PRO HG3 H N N 294 PRO HD2 H N N 295 PRO HD3 H N N 296 PRO HXT H N N 297 SER N N N N 298 SER CA C N S 299 SER C C N N 300 SER O O N N 301 SER CB C N N 302 SER OG O N N 303 SER OXT O N N 304 SER H H N N 305 SER H2 H N N 306 SER HA H N N 307 SER HB2 H N N 308 SER HB3 H N N 309 SER HG H N N 310 SER HXT H N N 311 SO4 S S N N 312 SO4 O1 O N N 313 SO4 O2 O N N 314 SO4 O3 O N N 315 SO4 O4 O N N 316 THR N N N N 317 THR CA C N S 318 THR C C N N 319 THR O O N N 320 THR CB C N R 321 THR OG1 O N N 322 THR CG2 C N N 323 THR OXT O N N 324 THR H H N N 325 THR H2 H N N 326 THR HA H N N 327 THR HB H N N 328 THR HG1 H N N 329 THR HG21 H N N 330 THR HG22 H N N 331 THR HG23 H N N 332 THR HXT H N N 333 TRP N N N N 334 TRP CA C N S 335 TRP C C N N 336 TRP O O N N 337 TRP CB C N N 338 TRP CG C Y N 339 TRP CD1 C Y N 340 TRP CD2 C Y N 341 TRP NE1 N Y N 342 TRP CE2 C Y N 343 TRP CE3 C Y N 344 TRP CZ2 C Y N 345 TRP CZ3 C Y N 346 TRP CH2 C Y N 347 TRP OXT O N N 348 TRP H H N N 349 TRP H2 H N N 350 TRP HA H N N 351 TRP HB2 H N N 352 TRP HB3 H N N 353 TRP HD1 H N N 354 TRP HE1 H N N 355 TRP HE3 H N N 356 TRP HZ2 H N N 357 TRP HZ3 H N N 358 TRP HH2 H N N 359 TRP HXT H N N 360 TYR N N N N 361 TYR CA C N S 362 TYR C C N N 363 TYR O O N N 364 TYR CB C N N 365 TYR CG C Y N 366 TYR CD1 C Y N 367 TYR CD2 C Y N 368 TYR CE1 C Y N 369 TYR CE2 C Y N 370 TYR CZ C Y N 371 TYR OH O N N 372 TYR OXT O N N 373 TYR H H N N 374 TYR H2 H N N 375 TYR HA H N N 376 TYR HB2 H N N 377 TYR HB3 H N N 378 TYR HD1 H N N 379 TYR HD2 H N N 380 TYR HE1 H N N 381 TYR HE2 H N N 382 TYR HH H N N 383 TYR HXT H N N 384 VAL N N N N 385 VAL CA C N S 386 VAL C C N N 387 VAL O O N N 388 VAL CB C N N 389 VAL CG1 C N N 390 VAL CG2 C N N 391 VAL OXT O N N 392 VAL H H N N 393 VAL H2 H N N 394 VAL HA H N N 395 VAL HB H N N 396 VAL HG11 H N N 397 VAL HG12 H N N 398 VAL HG13 H N N 399 VAL HG21 H N N 400 VAL HG22 H N N 401 VAL HG23 H N N 402 VAL HXT H N N 403 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 FME N CN sing N N 70 FME N CA sing N N 71 FME N H sing N N 72 FME CN O1 doub N N 73 FME CN HCN sing N N 74 FME CA CB sing N N 75 FME CA C sing N N 76 FME CA HA sing N N 77 FME CB CG sing N N 78 FME CB HB2 sing N N 79 FME CB HB3 sing N N 80 FME CG SD sing N N 81 FME CG HG2 sing N N 82 FME CG HG3 sing N N 83 FME SD CE sing N N 84 FME CE HE1 sing N N 85 FME CE HE2 sing N N 86 FME CE HE3 sing N N 87 FME C O doub N N 88 FME C OXT sing N N 89 FME OXT HXT sing N N 90 GLN N CA sing N N 91 GLN N H sing N N 92 GLN N H2 sing N N 93 GLN CA C sing N N 94 GLN CA CB sing N N 95 GLN CA HA sing N N 96 GLN C O doub N N 97 GLN C OXT sing N N 98 GLN CB CG sing N N 99 GLN CB HB2 sing N N 100 GLN CB HB3 sing N N 101 GLN CG CD sing N N 102 GLN CG HG2 sing N N 103 GLN CG HG3 sing N N 104 GLN CD OE1 doub N N 105 GLN CD NE2 sing N N 106 GLN NE2 HE21 sing N N 107 GLN NE2 HE22 sing N N 108 GLN OXT HXT sing N N 109 GLU N CA sing N N 110 GLU N H sing N N 111 GLU N H2 sing N N 112 GLU CA C sing N N 113 GLU CA CB sing N N 114 GLU CA HA sing N N 115 GLU C O doub N N 116 GLU C OXT sing N N 117 GLU CB CG sing N N 118 GLU CB HB2 sing N N 119 GLU CB HB3 sing N N 120 GLU CG CD sing N N 121 GLU CG HG2 sing N N 122 GLU CG HG3 sing N N 123 GLU CD OE1 doub N N 124 GLU CD OE2 sing N N 125 GLU OE2 HE2 sing N N 126 GLU OXT HXT sing N N 127 GLY N CA sing N N 128 GLY N H sing N N 129 GLY N H2 sing N N 130 GLY CA C sing N N 131 GLY CA HA2 sing N N 132 GLY CA HA3 sing N N 133 GLY C O doub N N 134 GLY C OXT sing N N 135 GLY OXT HXT sing N N 136 HIS N CA sing N N 137 HIS N H sing N N 138 HIS N H2 sing N N 139 HIS CA C sing N N 140 HIS CA CB sing N N 141 HIS CA HA sing N N 142 HIS C O doub N N 143 HIS C OXT sing N N 144 HIS CB CG sing N N 145 HIS CB HB2 sing N N 146 HIS CB HB3 sing N N 147 HIS CG ND1 sing Y N 148 HIS CG CD2 doub Y N 149 HIS ND1 CE1 doub Y N 150 HIS ND1 HD1 sing N N 151 HIS CD2 NE2 sing Y N 152 HIS CD2 HD2 sing N N 153 HIS CE1 NE2 sing Y N 154 HIS CE1 HE1 sing N N 155 HIS NE2 HE2 sing N N 156 HIS OXT HXT sing N N 157 HOH O H1 sing N N 158 HOH O H2 sing N N 159 ILE N CA sing N N 160 ILE N H sing N N 161 ILE N H2 sing N N 162 ILE CA C sing N N 163 ILE CA CB sing N N 164 ILE CA HA sing N N 165 ILE C O doub N N 166 ILE C OXT sing N N 167 ILE CB CG1 sing N N 168 ILE CB CG2 sing N N 169 ILE CB HB sing N N 170 ILE CG1 CD1 sing N N 171 ILE CG1 HG12 sing N N 172 ILE CG1 HG13 sing N N 173 ILE CG2 HG21 sing N N 174 ILE CG2 HG22 sing N N 175 ILE CG2 HG23 sing N N 176 ILE CD1 HD11 sing N N 177 ILE CD1 HD12 sing N N 178 ILE CD1 HD13 sing N N 179 ILE OXT HXT sing N N 180 LEU N CA sing N N 181 LEU N H sing N N 182 LEU N H2 sing N N 183 LEU CA C sing N N 184 LEU CA CB sing N N 185 LEU CA HA sing N N 186 LEU C O doub N N 187 LEU C OXT sing N N 188 LEU CB CG sing N N 189 LEU CB HB2 sing N N 190 LEU CB HB3 sing N N 191 LEU CG CD1 sing N N 192 LEU CG CD2 sing N N 193 LEU CG HG sing N N 194 LEU CD1 HD11 sing N N 195 LEU CD1 HD12 sing N N 196 LEU CD1 HD13 sing N N 197 LEU CD2 HD21 sing N N 198 LEU CD2 HD22 sing N N 199 LEU CD2 HD23 sing N N 200 LEU OXT HXT sing N N 201 LYS N CA sing N N 202 LYS N H sing N N 203 LYS N H2 sing N N 204 LYS CA C sing N N 205 LYS CA CB sing N N 206 LYS CA HA sing N N 207 LYS C O doub N N 208 LYS C OXT sing N N 209 LYS CB CG sing N N 210 LYS CB HB2 sing N N 211 LYS CB HB3 sing N N 212 LYS CG CD sing N N 213 LYS CG HG2 sing N N 214 LYS CG HG3 sing N N 215 LYS CD CE sing N N 216 LYS CD HD2 sing N N 217 LYS CD HD3 sing N N 218 LYS CE NZ sing N N 219 LYS CE HE2 sing N N 220 LYS CE HE3 sing N N 221 LYS NZ HZ1 sing N N 222 LYS NZ HZ2 sing N N 223 LYS NZ HZ3 sing N N 224 LYS OXT HXT sing N N 225 MET N CA sing N N 226 MET N H sing N N 227 MET N H2 sing N N 228 MET CA C sing N N 229 MET CA CB sing N N 230 MET CA HA sing N N 231 MET C O doub N N 232 MET C OXT sing N N 233 MET CB CG sing N N 234 MET CB HB2 sing N N 235 MET CB HB3 sing N N 236 MET CG SD sing N N 237 MET CG HG2 sing N N 238 MET CG HG3 sing N N 239 MET SD CE sing N N 240 MET CE HE1 sing N N 241 MET CE HE2 sing N N 242 MET CE HE3 sing N N 243 MET OXT HXT sing N N 244 PHE N CA sing N N 245 PHE N H sing N N 246 PHE N H2 sing N N 247 PHE CA C sing N N 248 PHE CA CB sing N N 249 PHE CA HA sing N N 250 PHE C O doub N N 251 PHE C OXT sing N N 252 PHE CB CG sing N N 253 PHE CB HB2 sing N N 254 PHE CB HB3 sing N N 255 PHE CG CD1 doub Y N 256 PHE CG CD2 sing Y N 257 PHE CD1 CE1 sing Y N 258 PHE CD1 HD1 sing N N 259 PHE CD2 CE2 doub Y N 260 PHE CD2 HD2 sing N N 261 PHE CE1 CZ doub Y N 262 PHE CE1 HE1 sing N N 263 PHE CE2 CZ sing Y N 264 PHE CE2 HE2 sing N N 265 PHE CZ HZ sing N N 266 PHE OXT HXT sing N N 267 PRO N CA sing N N 268 PRO N CD sing N N 269 PRO N H sing N N 270 PRO CA C sing N N 271 PRO CA CB sing N N 272 PRO CA HA sing N N 273 PRO C O doub N N 274 PRO C OXT sing N N 275 PRO CB CG sing N N 276 PRO CB HB2 sing N N 277 PRO CB HB3 sing N N 278 PRO CG CD sing N N 279 PRO CG HG2 sing N N 280 PRO CG HG3 sing N N 281 PRO CD HD2 sing N N 282 PRO CD HD3 sing N N 283 PRO OXT HXT sing N N 284 SER N CA sing N N 285 SER N H sing N N 286 SER N H2 sing N N 287 SER CA C sing N N 288 SER CA CB sing N N 289 SER CA HA sing N N 290 SER C O doub N N 291 SER C OXT sing N N 292 SER CB OG sing N N 293 SER CB HB2 sing N N 294 SER CB HB3 sing N N 295 SER OG HG sing N N 296 SER OXT HXT sing N N 297 SO4 S O1 doub N N 298 SO4 S O2 doub N N 299 SO4 S O3 sing N N 300 SO4 S O4 sing N N 301 THR N CA sing N N 302 THR N H sing N N 303 THR N H2 sing N N 304 THR CA C sing N N 305 THR CA CB sing N N 306 THR CA HA sing N N 307 THR C O doub N N 308 THR C OXT sing N N 309 THR CB OG1 sing N N 310 THR CB CG2 sing N N 311 THR CB HB sing N N 312 THR OG1 HG1 sing N N 313 THR CG2 HG21 sing N N 314 THR CG2 HG22 sing N N 315 THR CG2 HG23 sing N N 316 THR OXT HXT sing N N 317 TRP N CA sing N N 318 TRP N H sing N N 319 TRP N H2 sing N N 320 TRP CA C sing N N 321 TRP CA CB sing N N 322 TRP CA HA sing N N 323 TRP C O doub N N 324 TRP C OXT sing N N 325 TRP CB CG sing N N 326 TRP CB HB2 sing N N 327 TRP CB HB3 sing N N 328 TRP CG CD1 doub Y N 329 TRP CG CD2 sing Y N 330 TRP CD1 NE1 sing Y N 331 TRP CD1 HD1 sing N N 332 TRP CD2 CE2 doub Y N 333 TRP CD2 CE3 sing Y N 334 TRP NE1 CE2 sing Y N 335 TRP NE1 HE1 sing N N 336 TRP CE2 CZ2 sing Y N 337 TRP CE3 CZ3 doub Y N 338 TRP CE3 HE3 sing N N 339 TRP CZ2 CH2 doub Y N 340 TRP CZ2 HZ2 sing N N 341 TRP CZ3 CH2 sing Y N 342 TRP CZ3 HZ3 sing N N 343 TRP CH2 HH2 sing N N 344 TRP OXT HXT sing N N 345 TYR N CA sing N N 346 TYR N H sing N N 347 TYR N H2 sing N N 348 TYR CA C sing N N 349 TYR CA CB sing N N 350 TYR CA HA sing N N 351 TYR C O doub N N 352 TYR C OXT sing N N 353 TYR CB CG sing N N 354 TYR CB HB2 sing N N 355 TYR CB HB3 sing N N 356 TYR CG CD1 doub Y N 357 TYR CG CD2 sing Y N 358 TYR CD1 CE1 sing Y N 359 TYR CD1 HD1 sing N N 360 TYR CD2 CE2 doub Y N 361 TYR CD2 HD2 sing N N 362 TYR CE1 CZ doub Y N 363 TYR CE1 HE1 sing N N 364 TYR CE2 CZ sing Y N 365 TYR CE2 HE2 sing N N 366 TYR CZ OH sing N N 367 TYR OH HH sing N N 368 TYR OXT HXT sing N N 369 VAL N CA sing N N 370 VAL N H sing N N 371 VAL N H2 sing N N 372 VAL CA C sing N N 373 VAL CA CB sing N N 374 VAL CA HA sing N N 375 VAL C O doub N N 376 VAL C OXT sing N N 377 VAL CB CG1 sing N N 378 VAL CB CG2 sing N N 379 VAL CB HB sing N N 380 VAL CG1 HG11 sing N N 381 VAL CG1 HG12 sing N N 382 VAL CG1 HG13 sing N N 383 VAL CG2 HG21 sing N N 384 VAL CG2 HG22 sing N N 385 VAL CG2 HG23 sing N N 386 VAL OXT HXT sing N N 387 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EZ3 _pdbx_initial_refinement_model.details 'Computationally-derived model of the epitope-scaffold, based on 1EZ3' #